RchiOBHm_Chr5g0031941

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
25682396 .. 25684578
2183 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31115

Sequence Viewer

Length: 2085 bp
ATGAACACAAAATTGAAGATGGCTGTCAACATAACAGCACTCCAGTTCTCACCAGAGCGTCTTCAGTTCCTTCTTGTTCTCTTGTTTGTTTTAACCTTGTCTGCAACTCCATTGACTTTCAACTTCTCCAGCTTTCCCGCCAACACCAGGACTCTATTTCTAGAGGGAGATGCTTTCACCGACGGCTCCCTCCGACTCACCAAAAGTGCTCTTGATGACGCAAGGAACTGGAGCACCGGTAGAGCCACCTTCGGTGAATCGTTCCTCCTCCGGCAGAATGAAAAACTAGCTGATTTCACTTCAAGTTTCATATTCTCCATTGACACCTCCAATGACCCCCTCTGCGGTGACGGCTTGGTGTTCTTCCTTGCTCCAAACGGCTCCTTACTCGACCAGGCCTTAGATAGAGGCAGCAAACTTGGCCTCCCTGTCAACACTACGCTGCCAAAATTTACCACTAGGTACTCGTTTGTGGCAGTCGAGTTTGATATCTACCCTAATAATAGGCATAATATAGGCCAACCAACAATCGAAGATCCTGATTACGATCATGTGGGGATCGACATCAACTCTGTCAAGTCTAATCTTACCACGGAATGGAGTGGTGGTATCATTGAAGGAAAACAAAATATTGCCACAATTAGCTACAACTCCAGCTCAAAAAATCTTAGTGTTGCCTTCACTACTTTTGTAGATCGTTACAGGAAAGTACAGGTGATCAAAAAAATTTATTGCTCGATTGATCTGCTTCAATACTTGCCCGATAGGGTCATTGTTGGATTCTCTGCTTCCACGGGTTATGCAGTTGCTCTGCATAAGATCATTGCATGGAATTTTACCTCCACTCTTCTGGAGGATGATAATTCGACAAACAACAATCCTCTGCCTAGCAATAGTCCGACGACGTCCAACAACAACGTAGGACTAGCAGTCGGATTGGGTGTTGGTGGATGTGTTACCTTGGTTGGTGCATTGGCTTTGGTTTGGTACGTCTTCTGCAGGAAGAAGAGGGGAACAGCTGGGGAAAGTACTACTGATGATGATACTTTGGAGTGTTTGGATATTCATGATTTGGTTCCTGATGAATTCGAAAAGGGGATAGGCCCCAGGAAGTTTTCCTACAATGAATTGGCCCAAGCAACTAACAATTTTGAACAAGGAGAAAAGCTTGGGGAAGGAGGATTTGGCCGAGTTTATAGAGGCTGCATCAAAGATTTGGACTCATATGTTGCTGTTAAGAAGATATCCCGAGGGTCTAAACAAGGGTTGAAGGAGTATGCAGCAGAAGTAAGTATCATCAGTCGGCTGAGGCATCGGAATCTAGTGCAACTAATTGGTTGGTGCCACGAAAAGAAACTCCTACTTGTCTACGAATATATGCCCAACGGAAGCTTAGATGCTCATCTGTTCAAAGAAGAAAGCATGTTAACTTGGGAGGTAAGGTACAAAATTGCAAATGGATTGGCCGCAGGATTGCTCTATCTTCACCAAGAATGGGAACAGTGTGTGCTGCACAGGGATATCAAATCCAGCAATGTTATGTTGGACTCGAATTTCAACGCCAAACTTGGAGATTTTGGGTTAGCTCGACTTGTAGACCATGGAAAAATGTCTCAAACTACGATTGTAGCAGGAACAATGGGCTACATGGCTATGGAATATGTTACAACGGGAAAGGCTAGCATGGAAACAGATGTCTATAGTTTCGGAGTTGTTGCTTTGGAAATAGCTTGTGGGAGAAAACCCATTGATTCGAGGTATGAAGAGAAGCAAATCAATATGGTGGAGTGGGTTTGGGAGCTCTATGGAGATGGGAAAATTATCGAAGCAGCTGATCCGAAACTGCGTGGAGAGTTTGATGTGAAACAAATGGAGTGCTTATTGATGGTTGGGTTGTGGTGCGCTCGTCCGGATTACAATTTCAGGCCTTTGATACAAGAAGCAATACGAGTGCTTAACTTCGAAGTTCCATTGCCCGTTCTCCCACCAAAGATGTCAATGGTTTTTGGTCTTCCACTATCACACTCAATGTTGTTCAATAGAGACACTACTAGTGGTCAAAGTGAGCCATCCTTCAATTCATGA

Protein Analysis

694

Amino Acids

77.33

Weight (kDa)

5.63

Isoelectric Point (pI)

30.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 38 - 291 1e-52 Legume lectin domain
Lectin_L-type_dom PF18483 57 - 274 4.9e-07 Legume lectin beta-barrel domain
Pkinase PF00069 384 - 590 5.3e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 385 - 595 6e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 908
AccB1I GGYRCC 1 cut(s) 1341
AccB7I CCANNNNNTGG 1 cut(s) 597
AccI GTMKAC 2 cut(s) 1368, 1596
AccIII TCCGGA 1 cut(s) 1909
AciI CCGC 3 cut(s) 138, 345, 1467
AclWI GGATC 3 cut(s) 530, 566, 1829
AcoI YGGCCR 2 cut(s) 1186, 1464
AcsI RAATTY 5 cut(s) 449, 726, 832, 1085, 1552
AcuI CTGAAG 1 cut(s) 47
AcyI GRCGYC 1 cut(s) 905
AfaI GTAC 5 cut(s) 464, 711, 989, 1030, 1445
AfiI CCNNNNNNNGG 4 cut(s) 147, 344, 597, 1495
AgeI ACCGGT 1 cut(s) 236
AhdI GACNNNNNGTC 1 cut(s) 929
AhlI ACTAGT 1 cut(s) 2051
AjnI CCWGG 3 cut(s) 146, 393, 1106
AjuI GAANNNNNNNTTGG 2 cut(s) 1167, 1199
Alw21I GWGCWC 3 cut(s) 211, 236, 1803
Alw26I GTCTC 2 cut(s) 1617, 2037
AlwI GGATC 3 cut(s) 530, 566, 1829
Ama87I CYCGRG 1 cut(s) 1248
Aor13HI TCCGGA 1 cut(s) 1909
AoxI GGCC 8 cut(s) 396, 421, 517, 1102, 1131, 1186, 1464, 1925
ApeKI GCWGC 6 cut(s) 411, 442, 1203, 1280, 1510, 1829
ApoI RAATTY 5 cut(s) 449, 726, 832, 1085, 1552
AsiGI ACCGGT 1 cut(s) 236
AspLEI GCGC 1 cut(s) 1904
AspS9I GGNCC 2 cut(s) 1103, 1132
AsuHPI GGTGA 7 cut(s) 42, 169, 190, 266, 359, 727, 1478
AsuII TTCGAA 2 cut(s) 1089, 1962
AsuNHI GCTAGC 1 cut(s) 1679
AvaI CYCGRG 1 cut(s) 1248
BanI GGYRCC 1 cut(s) 1341
BanII GRGCYC 1 cut(s) 1803
BarI GAAGNNNNNNTAC 2 cut(s) 1103, 1135
BbsI GAAGAC 3 cut(s) 53, 985, 2003
Bbv12I GWGCWC 3 cut(s) 211, 236, 1803
BbvCI CCTCAGC 1 cut(s) 1307
BbvI GCAGC 6 cut(s) 423, 429, 1190, 1292, 1497, 1841
BccI CCATC 4 cut(s) 13, 1805, 1879, 2077
BceAI ACGGC 3 cut(s) 199, 367, 394
BcgI CGANNNNNNTGC 2 cut(s) 727, 761
BciT130I CCWGG 3 cut(s) 148, 395, 1108
BclI TGATCA 1 cut(s) 717
BcoDI GTCTC 2 cut(s) 1617, 2037
BcuI ACTAGT 1 cut(s) 2051
BfaI CTAG 8 cut(s) 161, 287, 459, 888, 926, 1322, 1680, 2052
BfmI CTRYAG 2 cut(s) 997, 1699
BisI GCNGC 7 cut(s) 412, 443, 1204, 1281, 1467, 1511, 1830
BlsI GCNGC 7 cut(s) 413, 444, 1205, 1282, 1468, 1512, 1831
BmcAI AGTACT 1 cut(s) 1030
Bme1390I CCNGG 3 cut(s) 148, 395, 1108
BmeRI GACNNNNNGTC 1 cut(s) 929
BmeT110I CYCGRG 1 cut(s) 1248
BmgT120I GGNCC 2 cut(s) 1103, 1132
BmiI GGNNCC 5 cut(s) 187, 382, 1077, 1105, 1343
BmrFI CCNGG 3 cut(s) 148, 395, 1108
BmsI GCATC 4 cut(s) 160, 1215, 1321, 1387
BmtI GCTAGC 1 cut(s) 1683
BpiI GAAGAC 3 cut(s) 53, 985, 2003
BpmI CTGGAG 5 cut(s) 26, 112, 250, 637, 872
Bpu10I CCTNAGC 1 cut(s) 1307
Bpu14I TTCGAA 2 cut(s) 1089, 1962
BsaBI GATNNNNATC 3 cut(s) 546, 563, 1401
BsaHI GRCGYC 1 cut(s) 905
BsaJI CCNNGG 6 cut(s) 591, 792, 960, 1106, 1249, 1600
BsaWI WCCGGW 2 cut(s) 236, 1909
BsaXI ACNNNNNCTCC 8 cut(s) 223, 253, 408, 438, 592, 622, 1427, 1457
Bsc4I CCNNNNNNNGG 4 cut(s) 147, 344, 597, 1495
Bse118I RCCGGY 1 cut(s) 236
Bse1I ACTGG 2 cut(s) 43, 233
Bse3DI GCAATG 3 cut(s) 822, 1540, 1970
Bse8I GATNNNNATC 3 cut(s) 546, 563, 1401
BseAI TCCGGA 1 cut(s) 1909
BseBI CCWGG 3 cut(s) 148, 395, 1108
BseDI CCNNGG 6 cut(s) 591, 792, 960, 1106, 1249, 1600
BseGI GGATG 3 cut(s) 862, 956, 2069
BseJI GATNNNNATC 3 cut(s) 546, 563, 1401
BseLI CCNNNNNNNGG 4 cut(s) 147, 344, 597, 1495
BseMI GCAATG 3 cut(s) 822, 1540, 1970
BseMII CTCAG 1 cut(s) 1298
BseNI ACTGG 2 cut(s) 43, 233
BseRI GAGGAG 1 cut(s) 257
BseXI GCAGC 6 cut(s) 423, 429, 1190, 1292, 1497, 1841
BseYI CCCAGC 1 cut(s) 1019
BsgI GTGCAG 1 cut(s) 1496
BshFI GGCC 8 cut(s) 398, 423, 519, 1104, 1133, 1188, 1466, 1927
BshNI GGYRCC 1 cut(s) 1341
BshTI ACCGGT 1 cut(s) 236
BsiHKAI GWGCWC 3 cut(s) 211, 236, 1803
BsiHKCI CYCGRG 1 cut(s) 1248
BsiSI CCGG 3 cut(s) 237, 271, 1910
BslI CCNNNNNNNGG 4 cut(s) 147, 344, 597, 1495
BsmAI GTCTC 2 cut(s) 1617, 2037
BsnI GGCC 8 cut(s) 398, 423, 519, 1104, 1133, 1188, 1466, 1927
BsoBI CYCGRG 1 cut(s) 1248
Bsp119I TTCGAA 2 cut(s) 1089, 1962
Bsp1286I GDGCHC 3 cut(s) 211, 236, 1803
Bsp13I TCCGGA 1 cut(s) 1909
Bsp143I GATC 8 cut(s) 535, 547, 558, 694, 717, 742, 819, 1834
Bsp19I CCATGG 1 cut(s) 1600
BspACI CCGC 3 cut(s) 138, 345, 1467
BspANI GGCC 8 cut(s) 398, 423, 519, 1104, 1133, 1188, 1466, 1927
BspCNI CTCAG 1 cut(s) 1299
BspEI TCCGGA 1 cut(s) 1909
BspHI TCATGA 2 cut(s) 1066, 2081
BspLI GGNNCC 5 cut(s) 187, 382, 1077, 1105, 1343
BspMAI CTGCAG 1 cut(s) 1001
BspOI GCTAGC 1 cut(s) 1683
BspPI GGATC 3 cut(s) 530, 566, 1829
BspT104I TTCGAA 2 cut(s) 1089, 1962
BspT107I GGYRCC 1 cut(s) 1341
BsrDI GCAATG 3 cut(s) 822, 1540, 1970
BsrFI RCCGGY 1 cut(s) 236
BsrI ACTGG 2 cut(s) 43, 233
BssAI RCCGGY 1 cut(s) 236
BssECI CCNNGG 6 cut(s) 591, 792, 960, 1106, 1249, 1600
BssMI GATC 8 cut(s) 535, 547, 558, 694, 717, 742, 819, 1834
BssNI GRCGYC 1 cut(s) 905
BssT1I CCWWGG 2 cut(s) 960, 1600
Bst2UI CCWGG 3 cut(s) 148, 395, 1108
Bst4CI ACNGT 1 cut(s) 1503
Bst6I CTCTTC 3 cut(s) 852, 1001, 1758
BstACI GRCGYC 1 cut(s) 905
BstBI TTCGAA 2 cut(s) 1089, 1962
BstC8I GCNNGC 1 cut(s) 1681
BstDEI CTNAG 4 cut(s) 400, 668, 1307, 1393
BstDSI CCRYGG 3 cut(s) 591, 792, 1600
BstF5I GGATG 3 cut(s) 862, 956, 2069
BstHHI GCGC 1 cut(s) 1904
BstKTI GATC 8 cut(s) 538, 550, 561, 697, 720, 745, 822, 1837
BstMAI GTCTC 2 cut(s) 1617, 2037
BstMBI GATC 8 cut(s) 535, 547, 558, 694, 717, 742, 819, 1834
BstMWI GCNNNNNNNGC 2 cut(s) 351, 420
BstNI CCWGG 3 cut(s) 148, 395, 1108
BstNSI RCATGY 1 cut(s) 1426
BstSCI CCNGG 3 cut(s) 146, 393, 1106
BstSFI CTRYAG 2 cut(s) 997, 1699
BstV1I GCAGC 6 cut(s) 423, 429, 1190, 1292, 1497, 1841
BstV2I GAAGAC 3 cut(s) 53, 985, 2003
BstX2I RGATCY 1 cut(s) 535
BstXI CCANNNNNNTGG 1 cut(s) 850
BstYI RGATCY 1 cut(s) 535
BsuRI GGCC 8 cut(s) 398, 423, 519, 1104, 1133, 1188, 1466, 1927
BtgI CCRYGG 3 cut(s) 591, 792, 1600
BtsCI GGATG 3 cut(s) 862, 956, 2069
BtsIMutI CAGTG 1 cut(s) 1508
Cac8I GCNNGC 1 cut(s) 1681
CciI TCATGA 2 cut(s) 1066, 2081
CfoI GCGC 1 cut(s) 1904
Cfr10I RCCGGY 1 cut(s) 236
Cfr13I GGNCC 2 cut(s) 1103, 1132
CseI GACGC 2 cut(s) 47, 227
Csp6I GTAC 5 cut(s) 463, 710, 988, 1029, 1444
CspAI ACCGGT 1 cut(s) 236
CviAII CATG 8 cut(s) 551, 828, 1067, 1423, 1601, 1648, 1684, 2082
CviQI GTAC 5 cut(s) 463, 710, 988, 1029, 1444
DdeI CTNAG 4 cut(s) 400, 668, 1307, 1393
DpnI GATC 8 cut(s) 537, 549, 560, 696, 719, 744, 821, 1836
DpnII GATC 8 cut(s) 535, 547, 558, 694, 717, 742, 819, 1834
DriI GACNNNNNGTC 1 cut(s) 929
EaeI YGGCCR 2 cut(s) 1186, 1464
Eam1104I CTCTTC 3 cut(s) 852, 1001, 1758
Eam1105I GACNNNNNGTC 1 cut(s) 929
EarI CTCTTC 3 cut(s) 852, 1001, 1758
Ecl136II GAGCTC 1 cut(s) 1801
Eco130I CCWWGG 2 cut(s) 960, 1600
Eco147I AGGCCT 2 cut(s) 398, 1927
Eco24I GRGCYC 1 cut(s) 1803
Eco32I GATATC 3 cut(s) 490, 1245, 1522
Eco53kI GAGCTC 1 cut(s) 1801
Eco57I CTGAAG 1 cut(s) 47
Eco88I CYCGRG 1 cut(s) 1248
EcoICRI GAGCTC 1 cut(s) 1801
EcoO109I RGGNCCY 1 cut(s) 1103
EcoRI GAATTC 1 cut(s) 1085
EcoRII CCWGG 3 cut(s) 146, 393, 1106
EcoRV GATATC 3 cut(s) 490, 1245, 1522
EcoT14I CCWWGG 2 cut(s) 960, 1600
EcoT38I GRGCYC 1 cut(s) 1803
ErhI CCWWGG 2 cut(s) 960, 1600
FaeI CATG 8 cut(s) 554, 831, 1070, 1426, 1604, 1651, 1687, 2085
FatI CATG 8 cut(s) 550, 827, 1066, 1422, 1600, 1647, 1683, 2081
FauI CCCGC 1 cut(s) 145
FauNDI CATATG 1 cut(s) 1225
FbaI TGATCA 1 cut(s) 717
FblI GTMKAC 2 cut(s) 1368, 1596
Fnu4HI GCNGC 7 cut(s) 412, 443, 1204, 1281, 1467, 1511, 1830
FokI GGATG 3 cut(s) 869, 963, 2056
FriOI GRGCYC 1 cut(s) 1803
Fsp4HI GCNGC 7 cut(s) 412, 443, 1204, 1281, 1467, 1511, 1830
FspBI CTAG 8 cut(s) 161, 287, 459, 888, 926, 1322, 1680, 2052
GlaI GCGC 1 cut(s) 1903
GluI GCNGC 7 cut(s) 412, 443, 1204, 1281, 1467, 1511, 1830
GsaI CCCAGC 1 cut(s) 1023
GsuI CTGGAG 5 cut(s) 26, 112, 250, 637, 872
HaeIII GGCC 8 cut(s) 398, 423, 519, 1104, 1133, 1188, 1466, 1927
HapII CCGG 3 cut(s) 237, 271, 1910
HgaI GACGC 2 cut(s) 47, 227
HhaI GCGC 1 cut(s) 1904
Hin1I GRCGYC 1 cut(s) 905
Hin1II CATG 8 cut(s) 554, 831, 1070, 1426, 1604, 1651, 1687, 2085
Hin6I GCGC 1 cut(s) 1902
HinP1I GCGC 1 cut(s) 1902
HincII GTYRAC 3 cut(s) 28, 433, 1428
HindII GTYRAC 3 cut(s) 28, 433, 1428
HindIII AAGCTT 2 cut(s) 1166, 1390
HinfI GANTC 8 cut(s) 151, 195, 257, 780, 1220, 1318, 1547, 1751
HpaI GTTAAC 1 cut(s) 1428
HpaII CCGG 3 cut(s) 237, 271, 1910
HphI GGTGA 7 cut(s) 42, 169, 190, 266, 359, 727, 1478
Hpy166II GTNNAC 5 cut(s) 28, 433, 1369, 1428, 1597
Hpy188I TCNGA 6 cut(s) 194, 900, 935, 1317, 1709, 1839
Hpy188III TCNNGA 9 cut(s) 161, 212, 539, 851, 1067, 1079, 1248, 1910, 2082
Hpy8I GTNNAC 5 cut(s) 28, 433, 1369, 1428, 1597
Hpy99I CGWCG 3 cut(s) 185, 904, 907
HpyAV CCTTC 7 cut(s) 80, 259, 611, 688, 1169, 1264, 2083
HpyCH4III ACNGT 1 cut(s) 1503
HpyCH4IV ACGT 3 cut(s) 905, 918, 990
HpyF10VI GCNNNNNNNGC 2 cut(s) 351, 420
HpyF3I CTNAG 4 cut(s) 400, 668, 1307, 1393
HpySE526I ACGT 3 cut(s) 905, 918, 990
Hsp92I GRCGYC 1 cut(s) 905
Hsp92II CATG 8 cut(s) 554, 831, 1070, 1426, 1604, 1651, 1687, 2085
HspAI GCGC 1 cut(s) 1902
Kpn2I TCCGGA 1 cut(s) 1909
Ksp22I TGATCA 1 cut(s) 717
KspAI GTTAAC 1 cut(s) 1428
Kzo9I GATC 8 cut(s) 535, 547, 558, 694, 717, 742, 819, 1834
LmnI GCTCC 5 cut(s) 191, 231, 376, 386, 1798
Lsp1109I GCAGC 6 cut(s) 423, 429, 1190, 1292, 1497, 1841
LweI GCATC 4 cut(s) 160, 1215, 1321, 1387
MaeI CTAG 8 cut(s) 161, 287, 459, 888, 926, 1322, 1680, 2052
MaeII ACGT 3 cut(s) 905, 918, 990
MaeIII GTNAC 4 cut(s) 347, 698, 955, 1663
MalI GATC 8 cut(s) 537, 549, 560, 696, 719, 744, 821, 1836
MboI GATC 8 cut(s) 535, 547, 558, 694, 717, 742, 819, 1834
MflI RGATCY 1 cut(s) 535
MhlI GDGCHC 3 cut(s) 211, 236, 1803
MlyI GAGTC 4 cut(s) 145, 189, 1214, 1541
MmeI TCCRAC 6 cut(s) 217, 757, 913, 923, 933, 1524
MroI TCCGGA 1 cut(s) 1909
MseI TTAA 4 cut(s) 92, 1236, 1427, 1956
MslI CAYNNNNRTG 1 cut(s) 1652
MspA1I CMGCKG 2 cut(s) 1019, 1832
MspI CCGG 3 cut(s) 237, 271, 1910
MspR9I CCNGG 3 cut(s) 148, 395, 1108
MvaI CCWGG 3 cut(s) 148, 395, 1108
MwoI GCNNNNNNNGC 2 cut(s) 351, 420
NcoI CCATGG 1 cut(s) 1600
NdeI CATATG 1 cut(s) 1225
NdeII GATC 8 cut(s) 535, 547, 558, 694, 717, 742, 819, 1834
NheI GCTAGC 1 cut(s) 1679
NlaIII CATG 8 cut(s) 554, 831, 1070, 1426, 1604, 1651, 1687, 2085
NlaIV GGNNCC 5 cut(s) 187, 382, 1077, 1105, 1343
NmeAIII GCCGAG 1 cut(s) 1214
NmuCI GTSAC 1 cut(s) 347
NspI RCATGY 1 cut(s) 1426
NspV TTCGAA 2 cut(s) 1089, 1962
PagI TCATGA 2 cut(s) 1066, 2081
PceI AGGCCT 2 cut(s) 398, 1927
PfeI GAWTC 4 cut(s) 257, 780, 1318, 1751
PflFI GACNNNGTC 1 cut(s) 904
PflMI CCANNNNNTGG 1 cut(s) 597
PinAI ACCGGT 1 cut(s) 236
PkrI GCNGC 7 cut(s) 413, 444, 1205, 1282, 1468, 1512, 1831
PleI GAGTC 4 cut(s) 145, 189, 1214, 1541
PpsI GAGTC 4 cut(s) 145, 189, 1214, 1541
Psp124BI GAGCTC 1 cut(s) 1803
Psp6I CCWGG 3 cut(s) 146, 393, 1106
PspFI CCCAGC 1 cut(s) 1019
PspGI CCWGG 3 cut(s) 146, 393, 1106
PspN4I GGNNCC 5 cut(s) 187, 382, 1077, 1105, 1343
PspPI GGNCC 2 cut(s) 1103, 1132
PstI CTGCAG 1 cut(s) 1001
PsuI RGATCY 1 cut(s) 535
PsyI GACNNNGTC 1 cut(s) 904
PvuII CAGCTG 2 cut(s) 1019, 1832
RsaI GTAC 5 cut(s) 464, 711, 989, 1030, 1445
RsaNI GTAC 5 cut(s) 463, 710, 988, 1029, 1444
RseI CAYNNNNRTG 1 cut(s) 1652
SacI GAGCTC 1 cut(s) 1803
SaqAI TTAA 4 cut(s) 92, 1236, 1427, 1956
SatI GCNGC 7 cut(s) 412, 443, 1204, 1281, 1467, 1511, 1830
Sau3AI GATC 8 cut(s) 535, 547, 558, 694, 717, 742, 819, 1834
Sau96I GGNCC 2 cut(s) 1103, 1132
ScaI AGTACT 1 cut(s) 1030
SchI GAGTC 4 cut(s) 145, 189, 1214, 1541
ScrFI CCNGG 3 cut(s) 148, 395, 1108
SduI GDGCHC 3 cut(s) 211, 236, 1803
SfaNI GCATC 4 cut(s) 160, 1215, 1321, 1387
SfcI CTRYAG 2 cut(s) 997, 1699
SfuI TTCGAA 2 cut(s) 1089, 1962
SmiMI CAYNNNNRTG 1 cut(s) 1652
SpeI ACTAGT 1 cut(s) 2051
SseBI AGGCCT 2 cut(s) 398, 1927
SsiI CCGC 3 cut(s) 138, 345, 1467
SspI AATATT 1 cut(s) 631
SspMI CTAG 8 cut(s) 161, 287, 459, 888, 926, 1322, 1680, 2052
SstI GAGCTC 1 cut(s) 1803
StuI AGGCCT 2 cut(s) 398, 1927
StyD4I CCNGG 3 cut(s) 146, 393, 1106
StyI CCWWGG 2 cut(s) 960, 1600
TaaI ACNGT 1 cut(s) 1503
TaiI ACGT 3 cut(s) 908, 921, 993
TatI WGTACW 2 cut(s) 709, 1028
TauI GCSGC 1 cut(s) 1469
TfiI GAWTC 4 cut(s) 257, 780, 1318, 1751
Tru1I TTAA 4 cut(s) 92, 1236, 1427, 1956
Tru9I TTAA 4 cut(s) 92, 1236, 1427, 1956
TscAI CASTG 1 cut(s) 1508
TseFI GTSAC 1 cut(s) 347
TseI GCWGC 6 cut(s) 411, 442, 1203, 1280, 1510, 1829
Tsp45I GTSAC 1 cut(s) 347
TspDTI ATGAA 8 cut(s) 17, 294, 298, 1055, 1098, 1140, 1776, 2070
TspGWI ACGGA 2 cut(s) 608, 1401
TspRI CASTG 1 cut(s) 1508
Tth111I GACNNNGTC 1 cut(s) 904
Van91I CCANNNNNTGG 1 cut(s) 597
XapI RAATTY 5 cut(s) 449, 726, 832, 1085, 1552
XbaI TCTAGA 1 cut(s) 160
XceI RCATGY 1 cut(s) 1426
XmiI GTMKAC 2 cut(s) 1368, 1596
XspI CTAG 8 cut(s) 161, 287, 459, 888, 926, 1322, 1680, 2052
ZraI GACGTC 1 cut(s) 906
ZrmI AGTACT 1 cut(s) 1030
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.