Rh5CG252100

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
26554443 .. 26564326
9884 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG252100.1

Sequence Viewer

Length: 1323 bp
ATGTCACTACTTAGGATGCATCCGAGTATCCACCATGCCTTAATATTCGTGGAGAAGACACATCGTATGACAATTCTGCGAGCAGGTTCCCCTCTCTCTGTCCTAACAAGAATATACATCTTCTTTATACTAACCCCTTCTGCAACTCCACTAAACTTCGACTTCACCTCCTTCAGTACTAATGACAACATGAGTTTAGTCCTAGAGGGAGATGCTGCTTACAATATTGACGACCAGCTGCAACTCACCCGAAGCGCCGACACCATCAACGGGAGCGTCGGTCGAGTCACCTACTCCAGACCCTTCGTTCTAGGGAATACATCCACCGGAGAAATCGCAGATTTCACCTCGAATTTTACATTCTATATCGAGTCTGCAAATAACTCGGAGTACGGCGACGGGCTAGCTTTCTTCATAAAGCCAAACGGGTCCTTGCTTGACAGAACCCTCGGCAGAGGTAGCAGTCTCGGCCTGCCCGTAGACCCAAACAGTAACATGTCAAGGAATCAGCACTCTTTTGTGGCTGTGGAATTCGATATCTTCCACAATGGTGGCAAAACGGTGGAGGACCCTGCTGGCGATCATGTGGGTATCGACATCAACTCAGTAAAGTCCATTGAAACCCTTCCTTGGAATGGTAGTGTCCTGGAGGAAAAAGGCAACAGAGCATGGGTTAGTTATGATTCTAGCTCAAAAATACTCAGCGTGTCCTACATCACTTATGACAAGAATGGTATCCCTGATCGGAAAAAAATTCAGCGCAAGGTTAATTTGAGGCAGATATTACCGGAAGTGGTCGTTGTTGGGTTCTCCGCTTCGACTGGCACTCAAACTGCTCTGCACAAGATCAACTCATGGAGTTTTAATTCAACTTTAGTACTTCCTGCGTCAAGCAACAATACAACGGGAAACGACATGATCAATGTAAGACTTGTGATTGGATTGAGTATGGGTGGATGCATCATTGTCTTGGTTAGTGGGTTGGGTCTGGTTCGTTTTAAATTTTGGAAGAAGAAGGAACAAGTAGAGGAAAGTGATGAGGTTGAAGATCCTATGGAACTCAATGACTCGATGGATGAGGATTTCGAAAGAGGTACAGGGCCTAGGAAGTTTTCATACAACGAGTTGGCTCGTGTGACGGCGCATCTGATTTCTCTGGTGGCAAGGGCGATTGAGGCACCAGATTTCAGGAGCAGTGGTGGCGGTGTCTACTCCTTGAAGGTGGCTTCGGCACTGGTAGAACCTAACTTCGGTCGGGTTTTTCTGATGGGTAGTGCAACTTTGGGTGGTGGCTACAATAAGGGCTCAGTGACATTATGTTAA

Protein Analysis

440

Amino Acids

48.11

Weight (kDa)

5.89

Isoelectric Point (pI)

32.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 51 - 297 1.3e-63 Legume lectin domain
Lectin_L-type_dom PF18483 75 - 284 1.1e-10 Legume lectin beta-barrel domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 74
AccB1I GGYRCC 1 cut(s) 1177
AccI GTMKAC 2 cut(s) 480, 1209
AciI CCGC 2 cut(s) 813, 1203
AclWI GGATC 1 cut(s) 1043
AcsI RAATTY 4 cut(s) 352, 530, 753, 1001
AcuI CTGAAG 1 cut(s) 157
AfaI GTAC 4 cut(s) 178, 392, 879, 1096
AfiI CCNNNNNNNGG 4 cut(s) 270, 630, 635, 1250
AflIII ACRYGT 1 cut(s) 495
AgsI TTSAA 4 cut(s) 620, 870, 1046, 1219
AjnI CCWGG 1 cut(s) 645
AleI CACNNNNGTG 1 cut(s) 549
AluBI AGCT 3 cut(s) 238, 407, 690
AluI AGCT 3 cut(s) 238, 407, 690
Alw26I GTCTC 1 cut(s) 470
AlwI GGATC 1 cut(s) 1043
AoxI GGCC 2 cut(s) 469, 1100
ApeKI GCWGC 2 cut(s) 215, 238
ApoI RAATTY 4 cut(s) 352, 530, 753, 1001
Asp700I GAANNNNTTC 1 cut(s) 624
AspA2I CCTAGG 1 cut(s) 1103
AspLEI GCGC 3 cut(s) 257, 762, 1144
AspS9I GGNCC 3 cut(s) 429, 568, 1100
AsuHPI GGTGA 4 cut(s) 157, 238, 280, 337
AsuII TTCGAA 1 cut(s) 1086
AsuNHI GCTAGC 1 cut(s) 403
AvaII GGWCC 2 cut(s) 429, 568
AvrII CCTAGG 1 cut(s) 1103
BanI GGYRCC 1 cut(s) 1177
BanII GRGCYC 1 cut(s) 1307
BarI GAAGNNNNNNTAC 2 cut(s) 1100, 1132
BauI CACGAG 1 cut(s) 1131
BbsI GAAGAC 1 cut(s) 62
BbvI GCAGC 2 cut(s) 202, 225
BccI CCATC 3 cut(s) 272, 1066, 1261
BceAI ACGGC 2 cut(s) 409, 1155
BcgI CGANNNNNNTGC 2 cut(s) 366, 400
BciT130I CCWGG 1 cut(s) 647
BciVI GTATCC 2 cut(s) 38, 746
BclI TGATCA 1 cut(s) 918
BcoDI GTCTC 1 cut(s) 470
BfaI CTAG 5 cut(s) 203, 311, 404, 687, 1104
BfoI RGCGCY 1 cut(s) 258
BfuAI ACCTGC 1 cut(s) 74
BfuI GTATCC 2 cut(s) 38, 746
BisI GCNGC 2 cut(s) 216, 239
BlnI CCTAGG 1 cut(s) 1103
BlsI GCNGC 2 cut(s) 217, 240
BmcAI AGTACT 2 cut(s) 178, 879
Bme1390I CCNGG 1 cut(s) 647
Bme18I GGWCC 2 cut(s) 429, 568
BmgT120I GGNCC 3 cut(s) 429, 568, 1100
BmiI GGNNCC 4 cut(s) 88, 430, 570, 1179
BmrFI CCNGG 1 cut(s) 647
BmsI GCATC 6 cut(s) 6, 28, 202, 947, 969, 1153
BmtI GCTAGC 1 cut(s) 407
BpiI GAAGAC 1 cut(s) 62
BpmI CTGGAG 2 cut(s) 280, 668
Bpu14I TTCGAA 1 cut(s) 1086
BsaJI CCNNGG 3 cut(s) 448, 629, 1103
BsaWI WCCGGW 2 cut(s) 326, 787
BsaXI ACNNNNNCTCC 6 cut(s) 152, 182, 265, 295, 1183, 1213
Bsc4I CCNNNNNNNGG 4 cut(s) 270, 630, 635, 1250
Bse1I ACTGG 2 cut(s) 826, 1239
BseBI CCWGG 1 cut(s) 647
BseDI CCNNGG 3 cut(s) 448, 629, 1103
BseGI GGATG 5 cut(s) 19, 21, 320, 962, 1081
BseLI CCNNNNNNNGG 4 cut(s) 270, 630, 635, 1250
BseMII CTCAG 3 cut(s) 618, 715, 1320
BseNI ACTGG 2 cut(s) 826, 1239
BseXI GCAGC 2 cut(s) 202, 225
BsgI GTGCAG 1 cut(s) 824
Bsh1285I CGRYCG 2 cut(s) 283, 1255
BshFI GGCC 2 cut(s) 471, 1102
BshNI GGYRCC 1 cut(s) 1177
BsiEI CGRYCG 2 cut(s) 283, 1255
BsiSI CCGG 2 cut(s) 327, 788
BslI CCNNNNNNNGG 4 cut(s) 270, 630, 635, 1250
BsmAI GTCTC 1 cut(s) 470
BsnI GGCC 2 cut(s) 471, 1102
Bsp119I TTCGAA 1 cut(s) 1086
Bsp1286I GDGCHC 1 cut(s) 1307
Bsp143I GATC 5 cut(s) 580, 742, 846, 918, 1048
BspACI CCGC 2 cut(s) 813, 1203
BspANI GGCC 2 cut(s) 471, 1102
BspCNI CTCAG 3 cut(s) 617, 714, 1319
BspLI GGNNCC 4 cut(s) 88, 430, 570, 1179
BspMI ACCTGC 1 cut(s) 74
BspOI GCTAGC 1 cut(s) 407
BspPI GGATC 1 cut(s) 1043
BspT104I TTCGAA 1 cut(s) 1086
BspT107I GGYRCC 1 cut(s) 1177
BsrI ACTGG 2 cut(s) 826, 1239
BssECI CCNNGG 3 cut(s) 448, 629, 1103
BssMI GATC 5 cut(s) 580, 742, 846, 918, 1048
BssSI CACGAG 1 cut(s) 1131
BssT1I CCWWGG 2 cut(s) 629, 1103
Bst2BI CACGAG 1 cut(s) 1131
Bst2UI CCWGG 1 cut(s) 647
Bst4CI ACNGT 2 cut(s) 491, 562
BstBI TTCGAA 1 cut(s) 1086
BstC8I GCNNGC 4 cut(s) 81, 405, 473, 577
BstDEI CTNAG 4 cut(s) 11, 604, 701, 1306
BstF5I GGATG 5 cut(s) 19, 21, 320, 962, 1081
BstH2I RGCGCY 1 cut(s) 258
BstHHI GCGC 3 cut(s) 257, 762, 1144
BstKTI GATC 5 cut(s) 583, 745, 849, 921, 1051
BstMAI GTCTC 1 cut(s) 470
BstMBI GATC 5 cut(s) 580, 742, 846, 918, 1048
BstMCI CGRYCG 2 cut(s) 283, 1255
BstMWI GCNNNNNNNGC 4 cut(s) 459, 468, 1175, 1200
BstNI CCWGG 1 cut(s) 647
BstNSI RCATGY 1 cut(s) 499
BstSCI CCNGG 1 cut(s) 645
BstV1I GCAGC 2 cut(s) 202, 225
BstV2I GAAGAC 1 cut(s) 62
BstX2I RGATCY 1 cut(s) 1048
BstXI CCANNNNNNTGG 1 cut(s) 551
BstYI RGATCY 1 cut(s) 1048
BsuI GTATCC 2 cut(s) 38, 746
BsuRI GGCC 2 cut(s) 471, 1102
BtsCI GGATG 5 cut(s) 19, 21, 320, 962, 1081
BtsI GCAGTG 1 cut(s) 1201
BtsIMutI CAGTG 3 cut(s) 1201, 1232, 1314
BveI ACCTGC 1 cut(s) 74
Cac8I GCNNGC 4 cut(s) 81, 405, 473, 577
CfoI GCGC 3 cut(s) 257, 762, 1144
Cfr13I GGNCC 3 cut(s) 429, 568, 1100
CseI GACGC 2 cut(s) 265, 876
Csp6I GTAC 4 cut(s) 177, 391, 878, 1095
CviAII CATG 7 cut(s) 35, 190, 496, 584, 669, 855, 916
CviQI GTAC 4 cut(s) 177, 391, 878, 1095
DdeI CTNAG 4 cut(s) 11, 604, 701, 1306
DpnI GATC 5 cut(s) 582, 744, 848, 920, 1050
DpnII GATC 5 cut(s) 580, 742, 846, 918, 1048
DraI TTTAAA 1 cut(s) 1000
Eco130I CCWWGG 2 cut(s) 629, 1103
Eco24I GRGCYC 1 cut(s) 1307
Eco32I GATATC 1 cut(s) 538
Eco47I GGWCC 2 cut(s) 429, 568
Eco57I CTGAAG 1 cut(s) 157
EcoO109I RGGNCCY 3 cut(s) 429, 568, 1100
EcoRI GAATTC 1 cut(s) 530
EcoRII CCWGG 1 cut(s) 645
EcoRV GATATC 1 cut(s) 538
EcoT14I CCWWGG 2 cut(s) 629, 1103
EcoT22I ATGCAT 2 cut(s) 21, 962
EcoT38I GRGCYC 1 cut(s) 1307
ErhI CCWWGG 2 cut(s) 629, 1103
FaeI CATG 7 cut(s) 38, 193, 499, 587, 672, 858, 919
FatI CATG 7 cut(s) 34, 189, 495, 583, 668, 854, 915
FbaI TGATCA 1 cut(s) 918
FblI GTMKAC 2 cut(s) 480, 1209
Fnu4HI GCNGC 2 cut(s) 216, 239
FokI GGATG 5 cut(s) 6, 28, 307, 969, 1088
FriOI GRGCYC 1 cut(s) 1307
Fsp4HI GCNGC 2 cut(s) 216, 239
FspBI CTAG 5 cut(s) 203, 311, 404, 687, 1104
GlaI GCGC 3 cut(s) 256, 761, 1143
GluI GCNGC 2 cut(s) 216, 239
GsuI CTGGAG 2 cut(s) 280, 668
HaeII RGCGCY 1 cut(s) 258
HaeIII GGCC 2 cut(s) 471, 1102
HapII CCGG 2 cut(s) 327, 788
HgaI GACGC 2 cut(s) 265, 876
HhaI GCGC 3 cut(s) 257, 762, 1144
Hin1II CATG 7 cut(s) 38, 193, 499, 587, 672, 858, 919
Hin6I GCGC 3 cut(s) 255, 760, 1142
HinP1I GCGC 3 cut(s) 255, 760, 1142
HinfI GANTC 5 cut(s) 285, 371, 505, 683, 1067
HpaII CCGG 2 cut(s) 327, 788
HphI GGTGA 4 cut(s) 157, 238, 280, 337
Hpy166II GTNNAC 2 cut(s) 481, 1210
Hpy188I TCNGA 5 cut(s) 24, 388, 747, 1149, 1266
Hpy188III TCNNGA 2 cut(s) 297, 1189
Hpy8I GTNNAC 2 cut(s) 481, 1210
Hpy99I CGWCG 2 cut(s) 281, 401
HpyAV CCTTC 6 cut(s) 147, 181, 313, 635, 1009, 1213
HpyCH4III ACNGT 2 cut(s) 491, 562
HpyCH4V TGCA 7 cut(s) 19, 143, 241, 377, 841, 960, 1277
HpyF10VI GCNNNNNNNGC 4 cut(s) 459, 468, 1175, 1200
HpyF3I CTNAG 4 cut(s) 11, 604, 701, 1306
Hsp92II CATG 7 cut(s) 38, 193, 499, 587, 672, 858, 919
HspAI GCGC 3 cut(s) 255, 760, 1142
Ksp22I TGATCA 1 cut(s) 918
Kzo9I GATC 5 cut(s) 580, 742, 846, 918, 1048
LmnI GCTCC 2 cut(s) 273, 1191
Lsp1109I GCAGC 2 cut(s) 202, 225
LweI GCATC 6 cut(s) 6, 28, 202, 947, 969, 1153
MaeI CTAG 5 cut(s) 203, 311, 404, 687, 1104
MaeIII GTNAC 5 cut(s) 3, 286, 491, 1135, 1309
MalI GATC 5 cut(s) 582, 744, 848, 920, 1050
MboI GATC 5 cut(s) 580, 742, 846, 918, 1048
MboII GAAGA 7 cut(s) 67, 112, 403, 532, 1021, 1024, 1058
MflI RGATCY 1 cut(s) 1048
MhlI GDGCHC 1 cut(s) 1307
MluCI AATT 7 cut(s) 72, 352, 530, 753, 769, 865, 1001
MlyI GAGTC 3 cut(s) 294, 380, 1061
Mph1103I ATGCAT 2 cut(s) 21, 962
MroXI GAANNNNTTC 1 cut(s) 624
MseI TTAA 5 cut(s) 41, 768, 864, 999, 1321
MslI CAYNNNNRTG 1 cut(s) 549
MspA1I CMGCKG 1 cut(s) 238
MspI CCGG 2 cut(s) 327, 788
MspR9I CCNGG 1 cut(s) 647
MvaI CCWGG 1 cut(s) 647
MwoI GCNNNNNNNGC 4 cut(s) 459, 468, 1175, 1200
NdeII GATC 5 cut(s) 580, 742, 846, 918, 1048
NheI GCTAGC 1 cut(s) 403
NlaIII CATG 7 cut(s) 38, 193, 499, 587, 672, 858, 919
NlaIV GGNNCC 4 cut(s) 88, 430, 570, 1179
NmeAIII GCCGAG 2 cut(s) 429, 447
NmuCI GTSAC 4 cut(s) 3, 286, 1135, 1309
NsiI ATGCAT 2 cut(s) 21, 962
NspI RCATGY 1 cut(s) 499
NspV TTCGAA 1 cut(s) 1086
OliI CACNNNNGTG 1 cut(s) 549
PciI ACATGT 1 cut(s) 495
PcsI WCGNNNNNNNCGW 1 cut(s) 474
PdmI GAANNNNTTC 1 cut(s) 624
PfeI GAWTC 2 cut(s) 505, 683
PfoI TCCNGGA 1 cut(s) 645
PkrI GCNGC 2 cut(s) 217, 240
PleI GAGTC 3 cut(s) 293, 379, 1061
PpsI GAGTC 3 cut(s) 293, 379, 1061
PpuMI RGGWCCY 2 cut(s) 429, 568
PscI ACATGT 1 cut(s) 495
Psp5II RGGWCCY 2 cut(s) 429, 568
Psp6I CCWGG 1 cut(s) 645
PspGI CCWGG 1 cut(s) 645
PspN4I GGNNCC 4 cut(s) 88, 430, 570, 1179
PspPI GGNCC 3 cut(s) 429, 568, 1100
PspPPI RGGWCCY 2 cut(s) 429, 568
PsuI RGATCY 1 cut(s) 1048
PvuII CAGCTG 1 cut(s) 238
RsaI GTAC 4 cut(s) 178, 392, 879, 1096
RsaNI GTAC 4 cut(s) 177, 391, 878, 1095
RseI CAYNNNNRTG 1 cut(s) 549
SaqAI TTAA 5 cut(s) 41, 768, 864, 999, 1321
SatI GCNGC 2 cut(s) 216, 239
Sau3AI GATC 5 cut(s) 580, 742, 846, 918, 1048
Sau96I GGNCC 3 cut(s) 429, 568, 1100
ScaI AGTACT 2 cut(s) 178, 879
SchI GAGTC 3 cut(s) 294, 380, 1061
ScrFI CCNGG 1 cut(s) 647
SduI GDGCHC 1 cut(s) 1307
SfaNI GCATC 6 cut(s) 6, 28, 202, 947, 969, 1153
SfuI TTCGAA 1 cut(s) 1086
SinI GGWCC 2 cut(s) 429, 568
SmiMI CAYNNNNRTG 1 cut(s) 549
Sse9I AATT 7 cut(s) 72, 352, 530, 753, 769, 865, 1001
SsiI CCGC 2 cut(s) 813, 1203
SspI AATATT 2 cut(s) 45, 226
SspMI CTAG 5 cut(s) 203, 311, 404, 687, 1104
StyD4I CCNGG 1 cut(s) 645
StyI CCWWGG 2 cut(s) 629, 1103
TaaI ACNGT 2 cut(s) 491, 562
TaqI TCGA 9 cut(s) 159, 283, 350, 369, 534, 594, 818, 1070, 1086
TaqII GACCGA 2 cut(s) 269, 1241
TasI AATT 7 cut(s) 72, 352, 530, 753, 769, 865, 1001
TatI WGTACW 2 cut(s) 176, 877
TfiI GAWTC 2 cut(s) 505, 683
Tru1I TTAA 5 cut(s) 41, 768, 864, 999, 1321
Tru9I TTAA 5 cut(s) 41, 768, 864, 999, 1321
TscAI CASTG 3 cut(s) 1201, 1239, 1314
TseFI GTSAC 4 cut(s) 3, 286, 1135, 1309
TseI GCWGC 2 cut(s) 215, 238
Tsp45I GTSAC 4 cut(s) 3, 286, 1135, 1309
TspDTI ATGAA 2 cut(s) 403, 1104
TspRI CASTG 3 cut(s) 1201, 1239, 1314
VpaK11BI GGWCC 2 cut(s) 429, 568
XapI RAATTY 4 cut(s) 352, 530, 753, 1001
XceI RCATGY 1 cut(s) 499
XmaJI CCTAGG 1 cut(s) 1103
XmiI GTMKAC 2 cut(s) 480, 1209
XmnI GAANNNNTTC 1 cut(s) 624
XspI CTAG 5 cut(s) 203, 311, 404, 687, 1104
ZrmI AGTACT 2 cut(s) 178, 879
Zsp2I ATGCAT 2 cut(s) 21, 962
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.