Rroxscaffold_2G00135600

L-type lectin-domain containing receptor kinase IX.1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000038
Physical Location & Seq
Forward (+)
73176882 .. 73178882
2001 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00135600.1

Sequence Viewer

Length: 2001 bp
ATGCCTCGAGTAAGGGTGGCAACTTTTCGTCTTCACTACTTCTTGAATAATTGCAGTATTATGCACTTGATCATCTCCATCAATTTCCTCCTTATTCCCCTTTGCCATACACTTTCCTTCAATATCAGTCACTTCGATAATTCTGCAAGCAAGATACTCTACGACGGTGATGCAGTGCCTTCTTCCGACGGTTCGGGATTCATTGAACTCAATAGAGATGAAGCTTGTCTTGTTGGCTGGGCGAGATATGCAGAGCCGTTGCACTTGTGGGAGGGGTCGTCACTTGCTGCAGACTTCACTACTGACTTCTCCTTCGTTGTGCACTTTCTTAACAGCAGCGAAATTGGTGATGGGCTTTCCTTCTTCCTTGCTCCGGTCCACTATACAATTCCACCCAACTCCCGCGGTCCTTTGATGGGCTTGTTCAACGCAACCACTCAGTTGGCAGTCTCCCAAAACCAGCTTGTGACGGTTGAGTTCGACACTACATCCAATCCCGTCTGGGATCCACCGGTGACGCACATCGGGATCAACGACAGGAGCGTCAGGTCAGTTGTTAATGCTAGCTGGGATCCTCTCAGTGGGAAACCGTGTCATGCACGGATAACGTACAATGCTACCACCAACAACCTCACTGTGTTTTGGACATACGAAGAAAATTTCGAGGCAAATTCTTCTCTTTCCTATCCTATTGACCTGAAAATGTCTCTCCCGGAGTGGGTTAGAATTGGATTTGCATCTTCTACAGGCCTTTTCCATGAGCGGCATGTTATAAGATCATGGGAATTCAGTAGTTCAGAAATAAAGTCCCATGCGAGCCGAAGGAGGATAGTCTTGAGGATTGGGGTCGCTGTAGCAGCAGTAGTTCTTATCTCGATTTTGGTGCTTTATGTATCCTACCGGTGGGTCGCAGGGAAGCGGATAAAGAGGACCCGTGGAGAAGGAATTGAGTGGAATGACTCCTCCAGGGTTGCATTGTCTCCCATAAATTCAGATCTTCAGATACGAGCCTTGCCAAGACAATTTACTTATCAAGAACTAGTTGCAGCCACCAATGGCTTCGCAAACGACAGAAGGCTAGGCCAAGGAGGATCCGGACAAGTTTATAGAGGGATCATACAAGATCTAGGCTGTGCAGTTGCAGTGAAGAGAATCTTTGCACAATCCGACAAGTATGAGAAAATCTTCATCAACGAAGTCAAGATCATAAGCCGAATAATACATAAAAACTTGGTGCAGTTTATTGGATGGTGCCATGAGCAAGGCGAATGCTTGCTTGTATATGCATACATGCCTAACAGTAGCCTTGACACGCATCTATTTGGCTCCAGGGCAACCTTGAAGTGGGGCTTTCGGTATAAGATAGCTTTAGGCTTGGCCTCGGCGCTTCATTATCTACACGAGGATGCAGAGCAGTGTGTCCTTCATAGGGATATCAAATCAGCTAACGTTCTGTTGGACAACGATTTTAGCACTAAACTTGGTGATTTTGGGATTGCTAAGCTTGTGGATTCGCGGTTAAGGTCTCAGACTACAGGGGTAGTCGGGACTTTTGGGTACATAGCTCCAGAATACGCTAGTGAAGGGAGGGCAAGCAAAGAATCAGATATTTTTAGCTTCGGAGTTGTGGCCTTGGAAATTGCTTGTGGAAGGAAGACTTACCACGACGGAGAATTCCACTTATCGCTTTATAGGTGGGTTTGGCATTTGTACCTTGCAGGAAACTTACTGGATGCAGCTGATGAGAGATTGGGTGTAGATTTTGATCAAAATGAAATGGAGTGCTTGTTAATTGTTGGATTATGGTGCGCTCATCCCAACTGCAAAGAAAGGCCAAAAGCAGGACAAGTGATTAATGTTCTCCAGCTTGAAGCACCATTGCCAAATCTTCCAAATATCATGCCTGATTACCCAATGCCTCAACCTCAGCAACAAGATCAATCCGGTTCCTCTCAGCCTCAGTTGCCACTAACTTCTAGCTTCAACACTGTAACTCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase

Protein Analysis

666

Amino Acids

74.63

Weight (kDa)

6.43

Isoelectric Point (pI)

48.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 38 - 273 7.9e-61 Legume lectin domain
Pkinase PF00069 355 - 557 9e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 357 - 556 3.9e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 773
AasI GACNNNNNNGTC 1 cut(s) 542
AccB1I GGYRCC 1 cut(s) 1251
AccBSI CCGCTC 1 cut(s) 763
AccII CGCG 2 cut(s) 405, 1516
AccIII TCCGGA 1 cut(s) 1094
AciI CCGC 5 cut(s) 403, 405, 763, 919, 1516
AclI AACGTT 1 cut(s) 1449
AclWI GGATC 8 cut(s) 500, 513, 536, 566, 579, 1086, 1099, 1121
AcsI RAATTY 5 cut(s) 658, 670, 785, 988, 1673
AcuI CTGAAG 1 cut(s) 983
AfaI GTAC 3 cut(s) 611, 1559, 1712
AfiI CCNNNNNNNGG 8 cut(s) 373, 416, 581, 718, 903, 1344, 1429, 1841
AgeI ACCGGT 2 cut(s) 511, 900
AgsI TTSAA 7 cut(s) 46, 121, 206, 427, 1342, 1871, 1984
AhlI ACTAGT 1 cut(s) 1039
AjnI CCWGG 2 cut(s) 965, 1328
Alw21I GWGCWC 1 cut(s) 324
Alw26I GTCTC 4 cut(s) 454, 711, 984, 1530
Alw44I GTGCAC 1 cut(s) 320
AlwI GGATC 8 cut(s) 500, 513, 536, 566, 579, 1086, 1099, 1121
Ama87I CYCGRG 1 cut(s) 6
Aor13HI TCCGGA 1 cut(s) 1094
AoxI GGCC 5 cut(s) 748, 1081, 1377, 1629, 1832
ApaLI GTGCAC 1 cut(s) 320
ApeKI GCWGC 5 cut(s) 287, 336, 857, 1046, 1736
ApoI RAATTY 5 cut(s) 658, 670, 785, 988, 1673
ArsI GACNNNNNNTTYG 2 cut(s) 296, 328
AseI ATTAAT 1 cut(s) 1854
AsiGI ACCGGT 2 cut(s) 511, 900
Asp700I GAANNNNTTC 1 cut(s) 1184
AspLEI GCGC 2 cut(s) 1387, 1811
AspS9I GGNCC 3 cut(s) 376, 407, 930
AsuC2I CCSGG 1 cut(s) 713
AsuHPI GGTGA 4 cut(s) 179, 359, 526, 1496
AsuNHI GCTAGC 1 cut(s) 563
AvaI CYCGRG 1 cut(s) 6
AvaII GGWCC 3 cut(s) 376, 407, 930
BaeGI GKGCMC 1 cut(s) 324
BamHI GGATCC 3 cut(s) 505, 571, 1091
BanI GGYRCC 1 cut(s) 1251
BauI CACGAG 1 cut(s) 1400
BbsI GAAGAC 2 cut(s) 23, 1661
Bbv12I GWGCWC 1 cut(s) 324
BbvCI CCTCAGC 1 cut(s) 1926
BbvI GCAGC 5 cut(s) 274, 348, 869, 1058, 1748
BccI CCATC 4 cut(s) 86, 344, 409, 1242
BceAI ACGGC 1 cut(s) 241
BcgI CGANNNNNNTGC 6 cut(s) 125, 152, 159, 186, 865, 899
BciT130I CCWGG 2 cut(s) 967, 1330
BciVI GTATCC 1 cut(s) 904
BclI TGATCA 2 cut(s) 69, 1765
BcnI CCSGG 1 cut(s) 713
BcoDI GTCTC 4 cut(s) 454, 711, 984, 1530
BcuI ACTAGT 1 cut(s) 1039
BfaI CTAG 6 cut(s) 564, 1040, 1079, 1127, 1578, 1977
BfmI CTRYAG 4 cut(s) 288, 744, 852, 1533
BfoI RGCGCY 1 cut(s) 1388
BfuI GTATCC 1 cut(s) 904
BglII AGATCT 2 cut(s) 994, 1123
BisI GCNGC 6 cut(s) 288, 337, 764, 858, 1047, 1737
BlpI GCTNAGC 1 cut(s) 1500
BlsI GCNGC 6 cut(s) 289, 338, 765, 859, 1048, 1738
Bme1390I CCNGG 3 cut(s) 713, 967, 1330
Bme18I GGWCC 3 cut(s) 376, 407, 930
BmeT110I CYCGRG 1 cut(s) 6
BmgT120I GGNCC 3 cut(s) 376, 407, 930
BmiI GGNNCC 7 cut(s) 507, 573, 932, 1093, 1253, 1327, 1948
BmrFI CCNGG 3 cut(s) 713, 967, 1330
BmsI GCATC 5 cut(s) 160, 746, 1324, 1396, 1723
BmtI GCTAGC 1 cut(s) 567
BpiI GAAGAC 2 cut(s) 23, 1661
BpmI CTGGAG 4 cut(s) 949, 1312, 1551, 1847
Bpu10I CCTNAGC 1 cut(s) 1926
Bpu1102I GCTNAGC 1 cut(s) 1500
BpuEI CTTGAG 1 cut(s) 856
BpuMI CCSGG 1 cut(s) 713
BsaBI GATNNNNATC 2 cut(s) 736, 1764
BsaI GGTCTC 1 cut(s) 1530
BsaJI CCNNGG 7 cut(s) 403, 934, 966, 1084, 1329, 1380, 1632
BsaWI WCCGGW 5 cut(s) 373, 511, 900, 1094, 1943
BsaXI ACNNNNNCTCC 4 cut(s) 263, 293, 1772, 1802
Bsc4I CCNNNNNNNGG 8 cut(s) 373, 416, 581, 718, 903, 1344, 1429, 1841
Bse118I RCCGGY 2 cut(s) 511, 900
Bse1I ACTGG 1 cut(s) 1734
Bse3DI GCAATG 1 cut(s) 1877
Bse8I GATNNNNATC 2 cut(s) 736, 1764
BseAI TCCGGA 1 cut(s) 1094
BseBI CCWGG 2 cut(s) 967, 1330
BseDI CCNNGG 7 cut(s) 403, 934, 966, 1084, 1329, 1380, 1632
BseGI GGATG 5 cut(s) 488, 1253, 1411, 1738, 1813
BseJI GATNNNNATC 2 cut(s) 736, 1764
BseLI CCNNNNNNNGG 8 cut(s) 373, 416, 581, 718, 903, 1344, 1429, 1841
BseMI GCAATG 1 cut(s) 1877
BseMII CTCAG 6 cut(s) 452, 592, 1541, 1940, 1967, 1973
BseNI ACTGG 1 cut(s) 1734
BseRI GAGGAG 1 cut(s) 952
BseSI GKGCMC 1 cut(s) 324
BseXI GCAGC 5 cut(s) 274, 348, 869, 1058, 1748
BseYI CCCAGC 2 cut(s) 237, 567
BsgI GTGCAG 2 cut(s) 1155, 1256
Bsh1236I CGCG 2 cut(s) 405, 1516
BshFI GGCC 5 cut(s) 750, 1083, 1379, 1631, 1834
BshNI GGYRCC 1 cut(s) 1251
BshTI ACCGGT 2 cut(s) 511, 900
BsiHKAI GWGCWC 1 cut(s) 324
BsiHKCI CYCGRG 1 cut(s) 6
BsiSI CCGG 6 cut(s) 374, 512, 713, 901, 1095, 1944
BslFI GGGAC 2 cut(s) 793, 1561
BslI CCNNNNNNNGG 8 cut(s) 373, 416, 581, 718, 903, 1344, 1429, 1841
BsmAI GTCTC 4 cut(s) 454, 711, 984, 1530
BsmFI GGGAC 2 cut(s) 793, 1561
BsmI GAATGC 1 cut(s) 1274
BsnI GGCC 5 cut(s) 750, 1083, 1379, 1631, 1834
Bso31I GGTCTC 1 cut(s) 1530
BsoBI CYCGRG 1 cut(s) 6
Bsp1286I GDGCHC 1 cut(s) 324
Bsp13I TCCGGA 1 cut(s) 1094
Bsp1720I GCTNAGC 1 cut(s) 1500
BspACI CCGC 5 cut(s) 403, 405, 763, 919, 1516
BspANI GGCC 5 cut(s) 750, 1083, 1379, 1631, 1834
BspCNI CTCAG 6 cut(s) 451, 591, 1540, 1939, 1966, 1972
BspEI TCCGGA 1 cut(s) 1094
BspFNI CGCG 2 cut(s) 405, 1516
BspLI GGNNCC 7 cut(s) 507, 573, 932, 1093, 1253, 1327, 1948
BspMAI CTGCAG 1 cut(s) 292
BspOI GCTAGC 1 cut(s) 567
BspPI GGATC 8 cut(s) 500, 513, 536, 566, 579, 1086, 1099, 1121
BspT107I GGYRCC 1 cut(s) 1251
BspTNI GGTCTC 1 cut(s) 1530
BsrBI CCGCTC 1 cut(s) 763
BsrDI GCAATG 1 cut(s) 1877
BsrFI RCCGGY 2 cut(s) 511, 900
BsrI ACTGG 1 cut(s) 1734
BssAI RCCGGY 2 cut(s) 511, 900
BssECI CCNNGG 7 cut(s) 403, 934, 966, 1084, 1329, 1380, 1632
BssSI CACGAG 1 cut(s) 1400
BssT1I CCWWGG 2 cut(s) 1084, 1632
Bst2BI CACGAG 1 cut(s) 1400
Bst2UI CCWGG 2 cut(s) 967, 1330
Bst4CI ACNGT 7 cut(s) 167, 191, 472, 591, 637, 1301, 1990
Bst6I CTCTTC 1 cut(s) 1142
BstC8I GCNNGC 5 cut(s) 148, 565, 817, 1274, 1594
BstDEI CTNAG 7 cut(s) 438, 578, 1500, 1527, 1926, 1953, 1959
BstDSI CCRYGG 2 cut(s) 403, 934
BstF5I GGATG 5 cut(s) 488, 1253, 1411, 1738, 1813
BstFNI CGCG 2 cut(s) 405, 1516
BstH2I RGCGCY 1 cut(s) 1388
BstHHI GCGC 2 cut(s) 1387, 1811
BstMAI GTCTC 4 cut(s) 454, 711, 984, 1530
BstMWI GCNNNNNNNGC 3 cut(s) 248, 857, 1963
BstNI CCWGG 2 cut(s) 967, 1330
BstNSI RCATGY 2 cut(s) 770, 1294
BstSCI CCNGG 3 cut(s) 711, 965, 1328
BstSFI CTRYAG 4 cut(s) 288, 744, 852, 1533
BstSLI GKGCMC 1 cut(s) 324
BstUI CGCG 2 cut(s) 405, 1516
BstV1I GCAGC 5 cut(s) 274, 348, 869, 1058, 1748
BstV2I GAAGAC 2 cut(s) 23, 1661
BstX2I RGATCY 5 cut(s) 505, 571, 994, 1091, 1123
BstXI CCANNNNNNTGG 1 cut(s) 442
BstYI RGATCY 5 cut(s) 505, 571, 994, 1091, 1123
BsuI GTATCC 1 cut(s) 904
BsuRI GGCC 5 cut(s) 750, 1083, 1379, 1631, 1834
BtgI CCRYGG 2 cut(s) 403, 934
BtsCI GGATG 5 cut(s) 488, 1253, 1411, 1738, 1813
BtsI GCAGTG 3 cut(s) 180, 1149, 1421
BtsIMutI CAGTG 6 cut(s) 180, 586, 633, 1149, 1421, 1986
Cac8I GCNNGC 5 cut(s) 148, 565, 817, 1274, 1594
CfoI GCGC 2 cut(s) 1387, 1811
Cfr10I RCCGGY 2 cut(s) 511, 900
Cfr13I GGNCC 3 cut(s) 376, 407, 930
Cfr42I CCGCGG 1 cut(s) 406
CseI GACGC 2 cut(s) 526, 532
Csp6I GTAC 3 cut(s) 610, 1558, 1711
CspAI ACCGGT 2 cut(s) 511, 900
CviAII CATG 8 cut(s) 596, 758, 767, 780, 812, 1256, 1291, 1900
CviQI GTAC 3 cut(s) 610, 1558, 1711
DdeI CTNAG 7 cut(s) 438, 578, 1500, 1527, 1926, 1953, 1959
DrdI GACNNNNNNGTC 1 cut(s) 542
DseDI GACNNNNNNGTC 1 cut(s) 542
Eam1104I CTCTTC 1 cut(s) 1142
EarI CTCTTC 1 cut(s) 1142
Eco130I CCWWGG 2 cut(s) 1084, 1632
Eco147I AGGCCT 1 cut(s) 750
Eco31I GGTCTC 1 cut(s) 1530
Eco32I GATATC 1 cut(s) 1435
Eco47I GGWCC 3 cut(s) 376, 407, 930
Eco57I CTGAAG 1 cut(s) 983
Eco88I CYCGRG 1 cut(s) 6
EcoO109I RGGNCCY 1 cut(s) 930
EcoRI GAATTC 2 cut(s) 785, 1673
EcoRII CCWGG 2 cut(s) 965, 1328
EcoRV GATATC 1 cut(s) 1435
EcoT14I CCWWGG 2 cut(s) 1084, 1632
EcoT22I ATGCAT 1 cut(s) 1288
ErhI CCWWGG 2 cut(s) 1084, 1632
FaeI CATG 8 cut(s) 599, 761, 770, 783, 815, 1259, 1294, 1903
FalI AAGNNNNNCTT 8 cut(s) 213, 245, 1139, 1171, 1334, 1366, 1642, 1674
FaqI GGGAC 2 cut(s) 793, 1561
FatI CATG 8 cut(s) 595, 757, 766, 779, 811, 1255, 1290, 1899
FauI CCCGC 1 cut(s) 410
FbaI TGATCA 2 cut(s) 69, 1765
Fnu4HI GCNGC 6 cut(s) 288, 337, 764, 858, 1047, 1737
FokI GGATG 5 cut(s) 475, 1260, 1418, 1745, 1800
Fsp4HI GCNGC 6 cut(s) 288, 337, 764, 858, 1047, 1737
FspBI CTAG 6 cut(s) 564, 1040, 1079, 1127, 1578, 1977
GlaI GCGC 2 cut(s) 1386, 1810
GluI GCNGC 6 cut(s) 288, 337, 764, 858, 1047, 1737
GsaI CCCAGC 2 cut(s) 241, 571
GsuI CTGGAG 4 cut(s) 949, 1312, 1551, 1847
HaeII RGCGCY 1 cut(s) 1388
HaeIII GGCC 5 cut(s) 750, 1083, 1379, 1631, 1834
HapII CCGG 6 cut(s) 374, 512, 713, 901, 1095, 1944
HgaI GACGC 2 cut(s) 526, 532
HhaI GCGC 2 cut(s) 1387, 1811
Hin1II CATG 8 cut(s) 599, 761, 770, 783, 815, 1259, 1294, 1903
Hin6I GCGC 2 cut(s) 1385, 1809
HinP1I GCGC 2 cut(s) 1385, 1809
HindIII AAGCTT 2 cut(s) 222, 1502
HinfI GANTC 5 cut(s) 198, 959, 1152, 1511, 1601
HpaII CCGG 6 cut(s) 374, 512, 713, 901, 1095, 1944
HphI GGTGA 4 cut(s) 179, 359, 526, 1496
Hpy166II GTNNAC 2 cut(s) 322, 379
Hpy188I TCNGA 8 cut(s) 187, 799, 994, 1002, 1168, 1530, 1606, 1622
Hpy8I GTNNAC 2 cut(s) 322, 379
Hpy99I CGWCG 3 cut(s) 167, 191, 1670
HpyCH4III ACNGT 7 cut(s) 167, 191, 472, 591, 637, 1301, 1990
HpyCH4IV ACGT 2 cut(s) 608, 1449
HpyF10VI GCNNNNNNNGC 3 cut(s) 248, 857, 1963
HpyF3I CTNAG 7 cut(s) 438, 578, 1500, 1527, 1926, 1953, 1959
HpySE526I ACGT 2 cut(s) 608, 1449
Hsp92II CATG 8 cut(s) 599, 761, 770, 783, 815, 1259, 1294, 1903
HspAI GCGC 2 cut(s) 1385, 1809
Kpn2I TCCGGA 1 cut(s) 1094
Ksp22I TGATCA 2 cut(s) 69, 1765
KspI CCGCGG 1 cut(s) 406
LmnI GCTCC 4 cut(s) 376, 540, 1331, 1570
Lsp1109I GCAGC 5 cut(s) 274, 348, 869, 1058, 1748
LweI GCATC 5 cut(s) 160, 746, 1324, 1396, 1723
MaeI CTAG 6 cut(s) 564, 1040, 1079, 1127, 1578, 1977
MaeII ACGT 2 cut(s) 608, 1449
MaeIII GTNAC 5 cut(s) 128, 279, 466, 514, 1990
MbiI CCGCTC 1 cut(s) 763
MflI RGATCY 5 cut(s) 505, 571, 994, 1091, 1123
MhlI GDGCHC 1 cut(s) 324
MlyI GAGTC 1 cut(s) 953
MmeI TCCRAC 4 cut(s) 210, 1191, 1437, 1777
Mph1103I ATGCAT 1 cut(s) 1288
MroI TCCGGA 1 cut(s) 1094
MroXI GAANNNNTTC 1 cut(s) 1184
MseI TTAA 6 cut(s) 330, 558, 1520, 1790, 1854, 1999
MslI CAYNNNNRTG 1 cut(s) 1404
MspA1I CMGCKG 2 cut(s) 405, 1739
MspI CCGG 6 cut(s) 374, 512, 713, 901, 1095, 1944
MspR9I CCNGG 3 cut(s) 713, 967, 1330
Mva1269I GAATGC 1 cut(s) 1274
MvaI CCWGG 2 cut(s) 967, 1330
MvnI CGCG 2 cut(s) 405, 1516
MwoI GCNNNNNNNGC 3 cut(s) 248, 857, 1963
NciI CCSGG 1 cut(s) 713
NheI GCTAGC 1 cut(s) 563
NlaIII CATG 8 cut(s) 599, 761, 770, 783, 815, 1259, 1294, 1903
NlaIV GGNNCC 7 cut(s) 507, 573, 932, 1093, 1253, 1327, 1948
NmeAIII GCCGAG 1 cut(s) 1361
NmuCI GTSAC 4 cut(s) 128, 279, 466, 514
NsiI ATGCAT 1 cut(s) 1288
NspI RCATGY 2 cut(s) 770, 1294
PaeR7I CTCGAG 1 cut(s) 6
PceI AGGCCT 1 cut(s) 750
PcsI WCGNNNNNNNCGW 2 cut(s) 531, 540
PctI GAATGC 1 cut(s) 1274
PdmI GAANNNNTTC 1 cut(s) 1184
PfeI GAWTC 4 cut(s) 198, 1152, 1511, 1601
PfoI TCCNGGA 1 cut(s) 711
PinAI ACCGGT 2 cut(s) 511, 900
PkrI GCNGC 6 cut(s) 289, 338, 765, 859, 1048, 1738
PleI GAGTC 1 cut(s) 953
PpsI GAGTC 1 cut(s) 953
PpuMI RGGWCCY 1 cut(s) 930
PshBI ATTAAT 1 cut(s) 1854
PsiI TTATAA 1 cut(s) 773
Psp1406I AACGTT 1 cut(s) 1449
Psp5II RGGWCCY 1 cut(s) 930
Psp6I CCWGG 2 cut(s) 965, 1328
PspFI CCCAGC 2 cut(s) 237, 567
PspGI CCWGG 2 cut(s) 965, 1328
PspN4I GGNNCC 7 cut(s) 507, 573, 932, 1093, 1253, 1327, 1948
PspPI GGNCC 3 cut(s) 376, 407, 930
PspPPI RGGWCCY 1 cut(s) 930
PspXI VCTCGAGB 1 cut(s) 6
PstI CTGCAG 1 cut(s) 292
PsuI RGATCY 5 cut(s) 505, 571, 994, 1091, 1123
PvuII CAGCTG 1 cut(s) 1739
RsaI GTAC 3 cut(s) 611, 1559, 1712
RsaNI GTAC 3 cut(s) 610, 1558, 1711
RseI CAYNNNNRTG 1 cut(s) 1404
SacII CCGCGG 1 cut(s) 406
SaqAI TTAA 6 cut(s) 330, 558, 1520, 1790, 1854, 1999
SatI GCNGC 6 cut(s) 288, 337, 764, 858, 1047, 1737
Sau96I GGNCC 3 cut(s) 376, 407, 930
SchI GAGTC 1 cut(s) 953
ScrFI CCNGG 3 cut(s) 713, 967, 1330
SduI GDGCHC 1 cut(s) 324
SfaNI GCATC 5 cut(s) 160, 746, 1324, 1396, 1723
SfcI CTRYAG 4 cut(s) 288, 744, 852, 1533
Sfr274I CTCGAG 1 cut(s) 6
Sfr303I CCGCGG 1 cut(s) 406
SgrAI CRCCGGYG 1 cut(s) 511
SgrBI CCGCGG 1 cut(s) 406
SinI GGWCC 3 cut(s) 376, 407, 930
SlaI CTCGAG 1 cut(s) 6
SmiMI CAYNNNNRTG 1 cut(s) 1404
SmlI CTYRAG 2 cut(s) 6, 835
SmoI CTYRAG 2 cut(s) 6, 835
SpeI ACTAGT 1 cut(s) 1039
SseBI AGGCCT 1 cut(s) 750
SsiI CCGC 5 cut(s) 403, 405, 763, 919, 1516
SspMI CTAG 6 cut(s) 564, 1040, 1079, 1127, 1578, 1977
StuI AGGCCT 1 cut(s) 750
StyD4I CCNGG 3 cut(s) 711, 965, 1328
StyI CCWWGG 2 cut(s) 1084, 1632
TaaI ACNGT 7 cut(s) 167, 191, 472, 591, 637, 1301, 1990
TaiI ACGT 2 cut(s) 611, 1452
TaqI TCGA 5 cut(s) 7, 135, 480, 663, 875
TauI GCSGC 1 cut(s) 766
TfiI GAWTC 4 cut(s) 198, 1152, 1511, 1601
Tru1I TTAA 6 cut(s) 330, 558, 1520, 1790, 1854, 1999
Tru9I TTAA 6 cut(s) 330, 558, 1520, 1790, 1854, 1999
TscAI CASTG 6 cut(s) 180, 586, 640, 1149, 1421, 1993
TseFI GTSAC 4 cut(s) 128, 279, 466, 514
TseI GCWGC 5 cut(s) 287, 336, 857, 1046, 1736
Tsp45I GTSAC 4 cut(s) 128, 279, 466, 514
TspDTI ATGAA 6 cut(s) 190, 234, 1177, 1379, 1415, 1788
TspGWI ACGGA 2 cut(s) 616, 1683
TspRI CASTG 6 cut(s) 180, 586, 640, 1149, 1421, 1993
VneI GTGCAC 1 cut(s) 320
VpaK11BI GGWCC 3 cut(s) 376, 407, 930
VspI ATTAAT 1 cut(s) 1854
XapI RAATTY 5 cut(s) 658, 670, 785, 988, 1673
XceI RCATGY 2 cut(s) 770, 1294
XhoI CTCGAG 1 cut(s) 6
XmnI GAANNNNTTC 1 cut(s) 1184
XspI CTAG 6 cut(s) 564, 1040, 1079, 1127, 1578, 1977
Zsp2I ATGCAT 1 cut(s) 1288
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.