RLG00000033769

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
31930408 .. 31932531
2124 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033769

Sequence Viewer

Length: 1959 bp
ATGACATCAATCCGGTCAGGATATCTTCAATTCCTTGTTGCACTAAGACTGTATCTCTTGATCTTTCTCTTCTGCCCTTCTGCAACTCCATTAAGCTTTAATTTCCCGAGCTTTAATCAAGATGATATTGTCAATATAACTCGGGAAGGAAGCGCTTTTATTGACAACAACTTTCTCCGCCTCACCAGAAGCGCACAAGACGACCGGCCGGGTGGAATTGGTCGAGCCAAGTACAACCAGCCCTTCCTGCTCGGAGAAAATACCACCGGAAAACTCGCCGATTTCACTACAAATTTTACCTTCTCCATTTATGCGCCAAATGATGACGAATTAAAATGGGGTGCCGGTGATGGACTAGCCTTCTTCTTAGCGCCAGACGGGTCCGAACTCAACAGCTCAGCAGGCTTTGCTCTCGGCCTCCCCTTGTATCATCAGTACCCATTTGTGGCGGTGGAATTCGATATCTACATGAACTTCGAAGCCCTCCCCAACACAAATGAAACCGTCGACGACCCGTCCGGCGATCATGTGGGAATCGACGTCAACACAGTCAAGTCATTGACTACCAGGGCTTGGAATGGTAGCATTATCAATGGACAAAACAATGATGTCCGGATCAGTTATAGTTCTAGCACAAAAAATCTTAGCGTTGCCTTCACAACCTTTTTGATGAATGGTACCAAAAAGATGAGCTATATTTCTTACACAGTCGATCTGAAGAACGTCTTACCGGATCGGGTCATTGTTGGGTTCTCGGCTTCAACAGGTGGAGCTTATGCTATATTTAAGATCGTCTCGTGGAATTTTACTTCAACTGCTCTGGTTGATGAGAATGCCAGGGAAAACACTCCGGTAAGTGTACTTTCTGCTCCTGCGCCTAGCCCTATGGCTAGTTCTAATCCCAACTCCGGCAATAAAGGACTAGTTGTTGGGTTGGGGGTTGGTGCAAGTATTATTCTAGTTGGTGGGTTGGCTTTGGTCTGCTTTATCTTTTGGAAGAAAAAAGAAACGACGGTCGACGGTGATGAAGATCCTATGGTTGGTGATGCCACTGACGATGAATTTGAACAAGGGACCGGTCCCAGAAAGTTTTTGTACGGCGATTTAGTCCGGGCAACTGGTAACTTTCAAGAGGAAGAAAAGCTTGGCCAAGGAGGATTTGGTGGGGTTTATAAGGGATTCATAAAGGACTTGAACTCATATGTAGCAGTGAAGAGGATATCCAAAGGATCTAAACAAGGAGTGAAGGAGTATGCATCAGAAGTAAGGATCATAAGTCGACTTAGGCATCGAAATCTGGTGCAACTCATTGGTTGGTGCCACAAGAAAAAAGAACTCCTGCTTGTTTACGAGTTCATGCCCAACGGCAGTTTAGATTCACATTTGTTCAAACAAAGAACTCGGCTTGTGGATCATGGAAAACAATCACAAACAACAGTTTTGGCTGGAACAATGGGCTACATGGCTCCTGAATGTGCTACTACTGGAAAAGCTAGTAAGGAAACAGATGTCTATAGTTTTGGAATCGTTGCTTTGGAGATAGCATGTGGGAGAAGACCGATTGATGTCAATATGGGAAGAGATCAAGTCAATATTGTAGAATGGGTTTGGAAGCTATATGGAGAAGGGAGAGTCATTGAAACAGCCGATCCAAAACTCTGCGGTGATTTTGATGAGAAACAAGTAGAGTGTTTAATCATTGTTGGGTTGTGGTGTGCTCACCCAGACTACTTGATGAGGCCTTCGATACAACAAGCGATTCAAGTACTTAACTTCGAAGTTCCAGTGCCAATTCTTCCATCGAAATTCCCTGTGGCGACCTATATTGCTTCTGCAGTATCGTTCTCCAAGTTTTCCAACAATAATACTGGTTCAAGTATAGGTCAAAGCGAGCCTTCTACCACTGGTTATAGCACATATTCCTCACAGTTCACTACATCTTCTACAACAGACTCTTAA

Protein Analysis

653

Amino Acids

71.37

Weight (kDa)

5.5

Isoelectric Point (pI)

32.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 31 - 280 1.9e-57 Legume lectin domain
Lectin_L-type_dom PF18483 55 - 260 6.7e-13 Legume lectin beta-barrel domain
Pkinase PF00069 376 - 464 9.3e-18 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 378 - 488 8.2e-19 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 474 - 587 3.4e-08 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 476 - 522 1.1e-06 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1173
AatII GACGTC 1 cut(s) 543
Acc65I GGTACC 1 cut(s) 677
AccB1I GGYRCC 3 cut(s) 341, 677, 1317
AccB7I CCANNNNNTGG 1 cut(s) 573
AccI GTMKAC 3 cut(s) 507, 1017, 1279
AccIII TCCGGA 1 cut(s) 612
AciI CCGC 3 cut(s) 178, 449, 1662
AclWI GGATC 7 cut(s) 623, 741, 1025, 1237, 1277, 1419, 1643
AcoI YGGCCR 2 cut(s) 206, 1147
AcsI RAATTY 5 cut(s) 292, 455, 802, 1061, 1805
AcuI CTGAAG 1 cut(s) 737
AcyI GRCGYC 1 cut(s) 540
AfaI GTAC 6 cut(s) 233, 437, 679, 861, 1097, 1767
AfeI AGCGCT 1 cut(s) 154
AfiI CCNNNNNNNGG 4 cut(s) 445, 573, 908, 1040
AgeI ACCGGT 1 cut(s) 1076
AhdI GACNNNNNGTC 1 cut(s) 514
AhlI ACTAGT 1 cut(s) 922
AjnI CCWGG 2 cut(s) 566, 836
AjuI GAANNNNNNNTTGG 2 cut(s) 1128, 1160
AluBI AGCT 8 cut(s) 96, 111, 396, 693, 773, 1144, 1493, 1615
AluI AGCT 8 cut(s) 96, 111, 396, 693, 773, 1144, 1493, 1615
Alw21I GWGCWC 1 cut(s) 1720
Alw26I GTCTC 1 cut(s) 799
AlwI GGATC 7 cut(s) 623, 741, 1025, 1237, 1277, 1419, 1643
Ama87I CYCGRG 2 cut(s) 106, 141
Aor13HI TCCGGA 1 cut(s) 612
Aor51HI AGCGCT 1 cut(s) 154
AoxI GGCC 4 cut(s) 206, 415, 1147, 1739
ApoI RAATTY 5 cut(s) 292, 455, 802, 1061, 1805
ArsI GACNNNNNNTTYG 2 cut(s) 1046, 1078
AsiGI ACCGGT 1 cut(s) 1076
Asp718I GGTACC 1 cut(s) 677
AspLEI GCGC 5 cut(s) 155, 194, 316, 373, 877
AspS9I GGNCC 3 cut(s) 381, 1074, 1079
AsuC2I CCSGG 2 cut(s) 210, 1112
AsuHPI GGTGA 6 cut(s) 175, 359, 1034, 1055, 1676, 1712
AsuII TTCGAA 2 cut(s) 477, 1776
AvaI CYCGRG 2 cut(s) 106, 141
AvaII GGWCC 3 cut(s) 381, 1074, 1079
BalI TGGCCA 1 cut(s) 1149
BanI GGYRCC 3 cut(s) 341, 677, 1317
BauI CACGAG 1 cut(s) 796
BbsI GAAGAC 1 cut(s) 1561
Bbv12I GWGCWC 1 cut(s) 1720
BccI CCATC 2 cut(s) 344, 1807
BceAI ACGGC 2 cut(s) 1114, 1381
BciT130I CCWGG 2 cut(s) 568, 838
BcnI CCSGG 2 cut(s) 210, 1112
BcoDI GTCTC 1 cut(s) 799
BcuI ACTAGT 1 cut(s) 922
BfaI CTAG 7 cut(s) 356, 630, 879, 891, 923, 959, 1494
BfmI CTRYAG 2 cut(s) 1513, 1833
BfoI RGCGCY 2 cut(s) 156, 374
BlpI GCTNAGC 1 cut(s) 397
BmcAI AGTACT 1 cut(s) 1767
Bme1390I CCNGG 4 cut(s) 210, 568, 838, 1112
Bme18I GGWCC 3 cut(s) 381, 1074, 1079
BmeRI GACNNNNNGTC 1 cut(s) 514
BmeT110I CYCGRG 2 cut(s) 106, 141
BmgT120I GGNCC 3 cut(s) 381, 1074, 1079
BmiI GGNNCC 7 cut(s) 343, 382, 679, 1075, 1081, 1319, 1467
BmrFI CCNGG 4 cut(s) 210, 568, 838, 1112
BmsI GCATC 3 cut(s) 1036, 1265, 1297
BpiI GAAGAC 1 cut(s) 1561
Bpu1102I GCTNAGC 1 cut(s) 397
Bpu14I TTCGAA 2 cut(s) 477, 1776
BpuMI CCSGG 2 cut(s) 210, 1112
BsaBI GATNNNNATC 1 cut(s) 1029
BsaHI GRCGYC 1 cut(s) 540
BsaJI CCNNGG 3 cut(s) 567, 837, 1150
BsaWI WCCGGW 6 cut(s) 12, 266, 612, 730, 850, 1076
Bsc4I CCNNNNNNNGG 4 cut(s) 445, 573, 908, 1040
Bse118I RCCGGY 3 cut(s) 204, 344, 1076
Bse1I ACTGG 5 cut(s) 1123, 1489, 1784, 1873, 1909
Bse8I GATNNNNATC 1 cut(s) 1029
BseAI TCCGGA 1 cut(s) 612
BseBI CCWGG 2 cut(s) 568, 838
BseDI CCNNGG 3 cut(s) 567, 837, 1150
BseJI GATNNNNATC 1 cut(s) 1029
BseLI CCNNNNNNNGG 4 cut(s) 445, 573, 908, 1040
BseMII CTCAG 1 cut(s) 411
BseNI ACTGG 5 cut(s) 1123, 1489, 1784, 1873, 1909
BseX3I CGGCCG 1 cut(s) 206
Bsh1285I CGRYCG 3 cut(s) 205, 209, 1017
BshFI GGCC 4 cut(s) 208, 417, 1149, 1741
BshNI GGYRCC 3 cut(s) 341, 677, 1317
BshTI ACCGGT 1 cut(s) 1076
BsiEI CGRYCG 3 cut(s) 205, 209, 1017
BsiHKAI GWGCWC 1 cut(s) 1720
BsiHKCI CYCGRG 2 cut(s) 106, 141
BslFI GGGAC 2 cut(s) 1065, 1087
BslI CCNNNNNNNGG 4 cut(s) 445, 573, 908, 1040
BsmAI GTCTC 1 cut(s) 799
BsmBI CGTCTC 1 cut(s) 799
BsmFI GGGAC 2 cut(s) 1065, 1087
BsmI GAATGC 1 cut(s) 838
BsnI GGCC 4 cut(s) 208, 417, 1149, 1741
BsoBI CYCGRG 2 cut(s) 106, 141
Bsp119I TTCGAA 2 cut(s) 477, 1776
Bsp1286I GDGCHC 1 cut(s) 1720
Bsp13I TCCGGA 1 cut(s) 612
Bsp1720I GCTNAGC 1 cut(s) 397
BspACI CCGC 3 cut(s) 178, 449, 1662
BspANI GGCC 4 cut(s) 208, 417, 1149, 1741
BspCNI CTCAG 1 cut(s) 410
BspEI TCCGGA 1 cut(s) 612
BspLI GGNNCC 7 cut(s) 343, 382, 679, 1075, 1081, 1319, 1467
BspMAI CTGCAG 1 cut(s) 1837
BspPI GGATC 7 cut(s) 623, 741, 1025, 1237, 1277, 1419, 1643
BspT104I TTCGAA 2 cut(s) 477, 1776
BspT107I GGYRCC 3 cut(s) 341, 677, 1317
BsrFI RCCGGY 3 cut(s) 204, 344, 1076
BsrI ACTGG 5 cut(s) 1123, 1489, 1784, 1873, 1909
BssAI RCCGGY 3 cut(s) 204, 344, 1076
BssECI CCNNGG 3 cut(s) 567, 837, 1150
BssNI GRCGYC 1 cut(s) 540
BssSI CACGAG 1 cut(s) 796
BssT1I CCWWGG 1 cut(s) 1150
Bst2BI CACGAG 1 cut(s) 796
Bst2UI CCWGG 2 cut(s) 568, 838
Bst4CI ACNGT 8 cut(s) 51, 505, 550, 709, 1015, 1022, 1438, 1929
Bst6I CTCTTC 3 cut(s) 74, 1208, 1573
BstACI GRCGYC 1 cut(s) 540
BstAPI GCANNNNNTGC 1 cut(s) 407
BstBI TTCGAA 2 cut(s) 477, 1776
BstC8I GCNNGC 2 cut(s) 403, 1892
BstDEI CTNAG 5 cut(s) 44, 367, 397, 644, 1283
BstH2I RGCGCY 2 cut(s) 156, 374
BstHHI GCGC 5 cut(s) 155, 194, 316, 373, 877
BstMAI GTCTC 1 cut(s) 799
BstMCI CGRYCG 3 cut(s) 205, 209, 1017
BstMWI GCNNNNNNNGC 3 cut(s) 247, 402, 407
BstNI CCWGG 2 cut(s) 568, 838
BstNSI RCATGY 1 cut(s) 1548
BstSCI CCNGG 4 cut(s) 208, 566, 836, 1110
BstSFI CTRYAG 2 cut(s) 1513, 1833
BstV2I GAAGAC 1 cut(s) 1561
BstX2I RGATCY 2 cut(s) 1030, 1229
BstYI RGATCY 2 cut(s) 1030, 1229
BstZI CGGCCG 1 cut(s) 206
BsuRI GGCC 4 cut(s) 208, 417, 1149, 1741
BtsI GCAGTG 1 cut(s) 1215
BtsIMutI CAGTG 4 cut(s) 1050, 1215, 1791, 1902
Cac8I GCNNGC 2 cut(s) 403, 1892
CfoI GCGC 5 cut(s) 155, 194, 316, 373, 877
Cfr10I RCCGGY 3 cut(s) 204, 344, 1076
Cfr13I GGNCC 3 cut(s) 381, 1074, 1079
Csp6I GTAC 6 cut(s) 232, 436, 678, 860, 1096, 1766
CspAI ACCGGT 1 cut(s) 1076
CviAII CATG 6 cut(s) 469, 527, 1357, 1415, 1462, 1545
CviQI GTAC 6 cut(s) 232, 436, 678, 860, 1096, 1766
DdeI CTNAG 5 cut(s) 44, 367, 397, 644, 1283
DriI GACNNNNNGTC 1 cut(s) 514
EaeI YGGCCR 2 cut(s) 206, 1147
EagI CGGCCG 1 cut(s) 206
Eam1104I CTCTTC 3 cut(s) 74, 1208, 1573
Eam1105I GACNNNNNGTC 1 cut(s) 514
EarI CTCTTC 3 cut(s) 74, 1208, 1573
EciI GGCGGA 1 cut(s) 167
EclXI CGGCCG 1 cut(s) 206
Eco130I CCWWGG 1 cut(s) 1150
Eco147I AGGCCT 1 cut(s) 1741
Eco32I GATATC 3 cut(s) 23, 463, 1221
Eco47I GGWCC 3 cut(s) 381, 1074, 1079
Eco47III AGCGCT 1 cut(s) 154
Eco52I CGGCCG 1 cut(s) 206
Eco57I CTGAAG 1 cut(s) 737
Eco88I CYCGRG 2 cut(s) 106, 141
EcoRI GAATTC 1 cut(s) 455
EcoRII CCWGG 2 cut(s) 566, 836
EcoRV GATATC 3 cut(s) 23, 463, 1221
EcoT14I CCWWGG 1 cut(s) 1150
EcoT22I ATGCAT 1 cut(s) 1258
ErhI CCWWGG 1 cut(s) 1150
Esp3I CGTCTC 1 cut(s) 799
FaeI CATG 6 cut(s) 472, 530, 1360, 1418, 1465, 1548
FalI AAGNNNNNCTT 6 cut(s) 710, 742, 1128, 1160, 1879, 1911
FaqI GGGAC 2 cut(s) 1065, 1087
FatI CATG 6 cut(s) 468, 526, 1356, 1414, 1461, 1544
FauNDI CATATG 1 cut(s) 1201
FblI GTMKAC 3 cut(s) 507, 1017, 1279
FspBI CTAG 7 cut(s) 356, 630, 879, 891, 923, 959, 1494
GlaI GCGC 5 cut(s) 154, 193, 315, 372, 876
HaeII RGCGCY 2 cut(s) 156, 374
HaeIII GGCC 4 cut(s) 208, 417, 1149, 1741
HhaI GCGC 5 cut(s) 155, 194, 316, 373, 877
Hin1I GRCGYC 1 cut(s) 540
Hin1II CATG 6 cut(s) 472, 530, 1360, 1418, 1465, 1548
Hin6I GCGC 5 cut(s) 153, 192, 314, 371, 875
HinP1I GCGC 5 cut(s) 153, 192, 314, 371, 875
HincII GTYRAC 4 cut(s) 508, 544, 1018, 1280
HindII GTYRAC 4 cut(s) 508, 544, 1018, 1280
HindIII AAGCTT 2 cut(s) 94, 1142
HinfI GANTC 7 cut(s) 534, 1179, 1376, 1524, 1632, 1759, 1952
HphI GGTGA 6 cut(s) 175, 359, 1034, 1055, 1676, 1712
Hpy166II GTNNAC 7 cut(s) 508, 544, 860, 1018, 1280, 1348, 1932
Hpy188I TCNGA 4 cut(s) 254, 385, 717, 1261
Hpy188III TCNNGA 8 cut(s) 18, 58, 106, 119, 143, 613, 1130, 1469
Hpy8I GTNNAC 7 cut(s) 508, 544, 860, 1018, 1280, 1348, 1932
Hpy99I CGWCG 5 cut(s) 509, 512, 542, 1015, 1022
HpyCH4III ACNGT 8 cut(s) 51, 505, 550, 709, 1015, 1022, 1438, 1929
HpyCH4IV ACGT 2 cut(s) 540, 723
HpyCH4V TGCA 6 cut(s) 41, 83, 947, 1256, 1303, 1835
HpyF10VI GCNNNNNNNGC 3 cut(s) 247, 402, 407
HpyF3I CTNAG 5 cut(s) 44, 367, 397, 644, 1283
HpySE526I ACGT 2 cut(s) 540, 723
Hsp92I GRCGYC 1 cut(s) 540
Hsp92II CATG 6 cut(s) 472, 530, 1360, 1418, 1465, 1548
HspAI GCGC 5 cut(s) 153, 192, 314, 371, 875
Kpn2I TCCGGA 1 cut(s) 612
KpnI GGTACC 1 cut(s) 681
LmnI GCTCC 3 cut(s) 770, 874, 1471
LweI GCATC 3 cut(s) 1036, 1265, 1297
MaeI CTAG 7 cut(s) 356, 630, 879, 891, 923, 959, 1494
MaeII ACGT 2 cut(s) 540, 723
MaeIII GTNAC 1 cut(s) 1121
MflI RGATCY 2 cut(s) 1030, 1229
MhlI GDGCHC 1 cut(s) 1720
MlsI TGGCCA 1 cut(s) 1149
MluNI TGGCCA 1 cut(s) 1149
MlyI GAGTC 2 cut(s) 1641, 1946
MmeI TCCRAC 1 cut(s) 1881
MnlI CCTC 8 cut(s) 191, 428, 494, 1126, 1148, 1209, 1731, 1933
Mox20I TGGCCA 1 cut(s) 1149
Mph1103I ATGCAT 1 cut(s) 1258
MroI TCCGGA 1 cut(s) 612
MscI TGGCCA 1 cut(s) 1149
MseI TTAA 8 cut(s) 92, 99, 114, 332, 786, 1694, 1770, 1957
Msp20I TGGCCA 1 cut(s) 1149
MspR9I CCNGG 4 cut(s) 210, 568, 838, 1112
Mva1269I GAATGC 1 cut(s) 838
MvaI CCWGG 2 cut(s) 568, 838
MwoI GCNNNNNNNGC 3 cut(s) 247, 402, 407
NciI CCSGG 2 cut(s) 210, 1112
NdeI CATATG 1 cut(s) 1201
NlaIII CATG 6 cut(s) 472, 530, 1360, 1418, 1465, 1548
NlaIV GGNNCC 7 cut(s) 343, 382, 679, 1075, 1081, 1319, 1467
NmeAIII GCCGAG 3 cut(s) 393, 734, 1381
NsiI ATGCAT 1 cut(s) 1258
NspI RCATGY 1 cut(s) 1548
NspV TTCGAA 2 cut(s) 477, 1776
PceI AGGCCT 1 cut(s) 1741
PctI GAATGC 1 cut(s) 838
PfeI GAWTC 5 cut(s) 534, 1179, 1376, 1524, 1759
PflMI CCANNNNNTGG 1 cut(s) 573
PinAI ACCGGT 1 cut(s) 1076
PleI GAGTC 2 cut(s) 1640, 1946
PpsI GAGTC 2 cut(s) 1640, 1946
PsiI TTATAA 1 cut(s) 1173
Psp6I CCWGG 2 cut(s) 566, 836
PspGI CCWGG 2 cut(s) 566, 836
PspN4I GGNNCC 7 cut(s) 343, 382, 679, 1075, 1081, 1319, 1467
PspPI GGNCC 3 cut(s) 381, 1074, 1079
PstI CTGCAG 1 cut(s) 1837
PsuI RGATCY 2 cut(s) 1030, 1229
RsaI GTAC 6 cut(s) 233, 437, 679, 861, 1097, 1767
RsaNI GTAC 6 cut(s) 232, 436, 678, 860, 1096, 1766
SalI GTCGAC 3 cut(s) 506, 1016, 1278
SaqAI TTAA 8 cut(s) 92, 99, 114, 332, 786, 1694, 1770, 1957
Sau96I GGNCC 3 cut(s) 381, 1074, 1079
ScaI AGTACT 1 cut(s) 1767
SchI GAGTC 2 cut(s) 1641, 1946
ScrFI CCNGG 4 cut(s) 210, 568, 838, 1112
SduI GDGCHC 1 cut(s) 1720
SfaNI GCATC 3 cut(s) 1036, 1265, 1297
SfcI CTRYAG 2 cut(s) 1513, 1833
SfuI TTCGAA 2 cut(s) 477, 1776
SgrDI CGTCGACG 1 cut(s) 506
SinI GGWCC 3 cut(s) 381, 1074, 1079
SpeI ACTAGT 1 cut(s) 922
SseBI AGGCCT 1 cut(s) 1741
SsiI CCGC 3 cut(s) 178, 449, 1662
SspI AATATT 1 cut(s) 1594
SspMI CTAG 7 cut(s) 356, 630, 879, 891, 923, 959, 1494
StuI AGGCCT 1 cut(s) 1741
StyD4I CCNGG 4 cut(s) 208, 566, 836, 1110
StyI CCWWGG 1 cut(s) 1150
TaaI ACNGT 8 cut(s) 51, 505, 550, 709, 1015, 1022, 1438, 1929
TaiI ACGT 2 cut(s) 543, 726
TaqII GACCGA 1 cut(s) 1573
TatI WGTACW 3 cut(s) 231, 859, 1765
TfiI GAWTC 5 cut(s) 534, 1179, 1376, 1524, 1759
Tru1I TTAA 8 cut(s) 92, 99, 114, 332, 786, 1694, 1770, 1957
Tru9I TTAA 8 cut(s) 92, 99, 114, 332, 786, 1694, 1770, 1957
TscAI CASTG 4 cut(s) 1057, 1215, 1791, 1909
TspDTI ATGAA 7 cut(s) 485, 513, 686, 1041, 1074, 1171, 1345
TspRI CASTG 4 cut(s) 1057, 1215, 1791, 1909
Van91I CCANNNNNTGG 1 cut(s) 573
VpaK11BI GGWCC 3 cut(s) 381, 1074, 1079
XapI RAATTY 5 cut(s) 292, 455, 802, 1061, 1805
XceI RCATGY 1 cut(s) 1548
XcmI CCANNNNNNNNNTGG 1 cut(s) 1157
XmiI GTMKAC 3 cut(s) 507, 1017, 1279
XspI CTAG 7 cut(s) 356, 630, 879, 891, 923, 959, 1494
ZraI GACGTC 1 cut(s) 541
ZrmI AGTACT 1 cut(s) 1767
Zsp2I ATGCAT 1 cut(s) 1258
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.