RchiOBHm_Chr2g0108161

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
19651040 .. 19653244
2205 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48210

Sequence Viewer

Length: 1995 bp
ATGATGTCTCTAATAAGGATGGCAACTTTTGGTCTTCACCACTACTTGAATAATTGCAGTATTATGCACTTGATCATCTCCATCAATTTCCTCCTTATTCCCCTTTGCCATACACTTTCCTTCAATATCAGTCACTTCGATAATTCTGCAACTAAGATACTCTACGACGGCGATGCAGCGCCTTCTTCCGACGGTTCGGGATTCATTGAACTCAATAGAGATGAAGCTTGTCTTGTTGGCTGGGCGAGATATGCAGAGCCGTTGCACTTGTGGGAGGGGTCGTCACTTGCTGCAGACTTCACTACTGACTTCTCCTTCGTTGTGCACTTTCTTAACAGCAGCGAAATTGGTGATGGGCTTTCCTTCTTCCTCGCTCCGGTCCACTTTACAATTCCACCCAACTCCCGCGGTCCTTTGATGGGTTTGTTCAACGCAACCACTCAGTTGGCAGTCTCCCAAAACCAGCTTGTGACGGTTGAGTTCGACACTACATCCAATCCAGTCTGGGATCCACCGGTGACGCACATCGGGATCAACGACAGGAGCGTCAGGTCAGTTGTTAATGCCAGCTGGGATCCTCTCAGTGGGAAACCGTGTCATGCACGGATAGCGTACAATGCTACCACCAACAACCTCACTGTGCTTTGGACATACGAAGAAAATTTCGAGGCAAATTCTTCCCTTTCCTATCCTATTGACCTGAAAATGTCTCTCCCGGAGTGGGTTAGAATTGGATTTGCATCTTCTACAGGCCTTTTCCATGAGCGGCATGTTATAAGATCATGGGAATTCAGTAGTTCAGAAATAAAGTCTGATGCGAGCCGAAGGAGGATAGTCTTGAGGATTGGGGTCGCTGTAGGAGCAGTAGTTCTTTTCTTGATTTTGGTGCTTTATGTATCCTACCGGTGGGTCGTAGGGAAGCGGATAAAGAGGACCCGTGGAGAAGGAATTGAGTCGAATGACTCCTCCAGGGTTGCATTGTCTCCCATAAATTCAGATCTTCAGATACTAGCCTTGCCAAGACAATTTACTTATCAAGAACTAGTTGCAGCCACCAATGGCTTCGCAAAAGACAGAAGGCTAGGCCAAGGAGGATCCGGACAAGTTTATAAAGGGATCATACAAGATCTAGGCTGTGCAGTTGCTGTGAAGAGAATCTTTGCACAATCCGACAAGTATGAGAAAATCTTCATCAACGAAGTCAAGATCATAAGCCGAATAATACATAAAAACTTGGTGCAGTTTATTGGATGGTGCCATGAGCAAGGCGAATGCTTACTTGTATATGCATACATGTCTAACAGTAGCCTTGACACGCATCTATTTGGCTCCAGGGCAACCTTGAAGTGGGGCTTTCGGTATAAGATAGCTTTAGGCTTGGCCTCGGCGCTTCATTATCTACACGAGGAAGCAGAGCAGTGTGTCCTTCATAGGGATATCAAATCAGCTAACGTTCTGTTGGACAACGATTTTAGCACTAAACTTGGTGATTTTGGGATTGCTAAGCTTGTGGATTCGCGGTTAAGGTCTCAGACTACAGGGGTAGTCGGGACTGTAGTCGGGACTTTTGGGTACATAGCTCCAGAATACGCTAGTGAAGGGAGGGCAAGCAAAGAATCAGATATTTTTAGCTTCGGAGTTGTGGCCTTGGAAATTGCTTGTGGAAGGACGACTTACCACGACGGAGAATTCCACTCATCGCTTTATAGGTGGGTTTGGCATTTGTACCTTGCAGGAAACTTACTGGATGCAGCTGATGAGAGATTGGGTGTAGATTTTGATCAAAATGAAATGGAGTGCTTGTTAATTGTTGGATTATGGTGCACTCATCCCAACTGCAAAGAAAGGCCAAAAGCAGGACAAGTGATTAAGGTTCTCCAGCTTGAAGCACCATTGCCAAATCTTCCACATAGCATGCCTGATTACCCAATGCCTCAACCTCAGCAACAAGATCAATCCGGTTCCTCTCAGCCTCAGTTGTCACTAACTGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

664

Amino Acids

74.02

Weight (kDa)

6.09

Isoelectric Point (pI)

49.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 39 - 275 2.4e-60 Legume lectin domain
Pkinase PF00069 356 - 568 4e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 358 - 561 4.4e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 776, 1110
AasI GACNNNNNNGTC 1 cut(s) 545
AccB1I GGYRCC 1 cut(s) 1254
AccBSI CCGCTC 1 cut(s) 766
AccII CGCG 2 cut(s) 408, 1519
AccIII TCCGGA 1 cut(s) 1097
AciI CCGC 5 cut(s) 406, 408, 766, 922, 1519
AclI AACGTT 1 cut(s) 1452
AclWI GGATC 8 cut(s) 503, 516, 539, 569, 582, 1089, 1102, 1124
AcsI RAATTY 5 cut(s) 661, 673, 788, 991, 1688
AcuI CTGAAG 1 cut(s) 986
AfaI GTAC 3 cut(s) 614, 1574, 1727
AfiI CCNNNNNNNGG 8 cut(s) 376, 419, 584, 721, 906, 1347, 1432, 1856
AflIII ACRYGT 1 cut(s) 1293
AgeI ACCGGT 2 cut(s) 514, 903
AgsI TTSAA 6 cut(s) 49, 124, 209, 430, 1345, 1886
AhlI ACTAGT 1 cut(s) 1042
AjnI CCWGG 2 cut(s) 968, 1331
AloI GAACNNNNNNTCC 2 cut(s) 852, 884
Alw21I GWGCWC 2 cut(s) 327, 1826
Alw26I GTCTC 5 cut(s) 12, 457, 714, 987, 1533
Alw44I GTGCAC 2 cut(s) 323, 1822
AlwI GGATC 8 cut(s) 503, 516, 539, 569, 582, 1089, 1102, 1124
AlwNI CAGNNNCTG 1 cut(s) 1145
Aor13HI TCCGGA 1 cut(s) 1097
AoxI GGCC 5 cut(s) 751, 1084, 1380, 1644, 1847
ApaLI GTGCAC 2 cut(s) 323, 1822
ApeKI GCWGC 5 cut(s) 176, 290, 339, 1049, 1751
ApoI RAATTY 5 cut(s) 661, 673, 788, 991, 1688
ArsI GACNNNNNNTTYG 2 cut(s) 299, 331
AsiGI ACCGGT 2 cut(s) 514, 903
Asp700I GAANNNNTTC 1 cut(s) 1187
AspLEI GCGC 2 cut(s) 181, 1390
AspS9I GGNCC 3 cut(s) 379, 410, 933
AsuC2I CCSGG 1 cut(s) 716
AsuHPI GGTGA 4 cut(s) 29, 362, 529, 1499
AvaII GGWCC 3 cut(s) 379, 410, 933
BaeGI GKGCMC 2 cut(s) 327, 1826
BamHI GGATCC 3 cut(s) 508, 574, 1094
BanI GGYRCC 1 cut(s) 1254
BauI CACGAG 1 cut(s) 1403
BbsI GAAGAC 1 cut(s) 26
Bbv12I GWGCWC 2 cut(s) 327, 1826
BbvCI CCTCAGC 1 cut(s) 1941
BbvI GCAGC 5 cut(s) 188, 277, 351, 1061, 1763
BccI CCATC 5 cut(s) 13, 89, 347, 412, 1245
BceAI ACGGC 2 cut(s) 184, 244
BcgI CGANNNNNNTGC 4 cut(s) 128, 155, 162, 189
BciT130I CCWGG 2 cut(s) 970, 1333
BciVI GTATCC 1 cut(s) 907
BclI TGATCA 2 cut(s) 72, 1780
BcnI CCSGG 1 cut(s) 716
BcoDI GTCTC 5 cut(s) 12, 457, 714, 987, 1533
BcuI ACTAGT 1 cut(s) 1042
BfaI CTAG 5 cut(s) 1010, 1043, 1082, 1130, 1593
BfmI CTRYAG 5 cut(s) 291, 747, 855, 1536, 1554
BfoI RGCGCY 2 cut(s) 182, 1391
BfuI GTATCC 1 cut(s) 907
BglII AGATCT 2 cut(s) 997, 1126
BisI GCNGC 6 cut(s) 177, 291, 340, 767, 1050, 1752
BlpI GCTNAGC 1 cut(s) 1503
BlsI GCNGC 6 cut(s) 178, 292, 341, 768, 1051, 1753
Bme1390I CCNGG 3 cut(s) 716, 970, 1333
Bme18I GGWCC 3 cut(s) 379, 410, 933
BmgT120I GGNCC 3 cut(s) 379, 410, 933
BmiI GGNNCC 7 cut(s) 510, 576, 935, 1096, 1256, 1330, 1963
BmrFI CCNGG 3 cut(s) 716, 970, 1333
BmsI GCATC 5 cut(s) 163, 749, 805, 1327, 1738
BoxI GACNNNNGTC 1 cut(s) 1556
BpiI GAAGAC 1 cut(s) 26
BpmI CTGGAG 4 cut(s) 952, 1315, 1566, 1862
Bpu10I CCTNAGC 1 cut(s) 1941
Bpu1102I GCTNAGC 1 cut(s) 1503
BpuEI CTTGAG 1 cut(s) 859
BpuMI CCSGG 1 cut(s) 716
BsaBI GATNNNNATC 2 cut(s) 739, 1779
BsaI GGTCTC 1 cut(s) 1533
BsaJI CCNNGG 7 cut(s) 406, 937, 969, 1087, 1332, 1383, 1647
BsaWI WCCGGW 5 cut(s) 376, 514, 903, 1097, 1958
BsaXI ACNNNNNCTCC 6 cut(s) 266, 296, 852, 882, 1787, 1817
Bsc4I CCNNNNNNNGG 8 cut(s) 376, 419, 584, 721, 906, 1347, 1432, 1856
Bse118I RCCGGY 2 cut(s) 514, 903
Bse1I ACTGG 2 cut(s) 500, 1749
Bse3DI GCAATG 1 cut(s) 1892
Bse8I GATNNNNATC 2 cut(s) 739, 1779
BseAI TCCGGA 1 cut(s) 1097
BseBI CCWGG 2 cut(s) 970, 1333
BseDI CCNNGG 7 cut(s) 406, 937, 969, 1087, 1332, 1383, 1647
BseGI GGATG 5 cut(s) 24, 491, 1256, 1753, 1828
BseJI GATNNNNATC 2 cut(s) 739, 1779
BseLI CCNNNNNNNGG 8 cut(s) 376, 419, 584, 721, 906, 1347, 1432, 1856
BseMI GCAATG 1 cut(s) 1892
BseMII CTCAG 7 cut(s) 455, 595, 1544, 1955, 1980, 1982, 1988
BseNI ACTGG 2 cut(s) 500, 1749
BseRI GAGGAG 1 cut(s) 955
BseSI GKGCMC 2 cut(s) 327, 1826
BseXI GCAGC 5 cut(s) 188, 277, 351, 1061, 1763
BseYI CCCAGC 2 cut(s) 240, 570
BsgI GTGCAG 2 cut(s) 1158, 1259
Bsh1236I CGCG 2 cut(s) 408, 1519
BshFI GGCC 5 cut(s) 753, 1086, 1382, 1646, 1849
BshNI GGYRCC 1 cut(s) 1254
BshTI ACCGGT 2 cut(s) 514, 903
BsiHKAI GWGCWC 2 cut(s) 327, 1826
BsiSI CCGG 6 cut(s) 377, 515, 716, 904, 1098, 1959
BslFI GGGAC 2 cut(s) 1564, 1576
BslI CCNNNNNNNGG 8 cut(s) 376, 419, 584, 721, 906, 1347, 1432, 1856
BsmAI GTCTC 5 cut(s) 12, 457, 714, 987, 1533
BsmFI GGGAC 2 cut(s) 1564, 1576
BsmI GAATGC 1 cut(s) 1277
BsnI GGCC 5 cut(s) 753, 1086, 1382, 1646, 1849
Bso31I GGTCTC 1 cut(s) 1533
Bsp1286I GDGCHC 2 cut(s) 327, 1826
Bsp13I TCCGGA 1 cut(s) 1097
Bsp1720I GCTNAGC 1 cut(s) 1503
BspACI CCGC 5 cut(s) 406, 408, 766, 922, 1519
BspANI GGCC 5 cut(s) 753, 1086, 1382, 1646, 1849
BspCNI CTCAG 7 cut(s) 454, 594, 1543, 1954, 1981, 1981, 1987
BspEI TCCGGA 1 cut(s) 1097
BspFNI CGCG 2 cut(s) 408, 1519
BspLI GGNNCC 7 cut(s) 510, 576, 935, 1096, 1256, 1330, 1963
BspMAI CTGCAG 1 cut(s) 295
BspPI GGATC 8 cut(s) 503, 516, 539, 569, 582, 1089, 1102, 1124
BspT107I GGYRCC 1 cut(s) 1254
BspTNI GGTCTC 1 cut(s) 1533
BsrBI CCGCTC 1 cut(s) 766
BsrDI GCAATG 1 cut(s) 1892
BsrFI RCCGGY 2 cut(s) 514, 903
BsrI ACTGG 2 cut(s) 500, 1749
BssAI RCCGGY 2 cut(s) 514, 903
BssECI CCNNGG 7 cut(s) 406, 937, 969, 1087, 1332, 1383, 1647
BssSI CACGAG 1 cut(s) 1403
BssT1I CCWWGG 2 cut(s) 1087, 1647
Bst2BI CACGAG 1 cut(s) 1403
Bst2UI CCWGG 2 cut(s) 970, 1333
Bst4CI ACNGT 6 cut(s) 194, 475, 594, 640, 1304, 1555
Bst6I CTCTTC 1 cut(s) 1145
BstC8I GCNNGC 4 cut(s) 568, 820, 1609, 1916
BstDEI CTNAG 9 cut(s) 153, 441, 581, 1503, 1530, 1941, 1968, 1974, 1989
BstDSI CCRYGG 2 cut(s) 406, 937
BstF5I GGATG 5 cut(s) 24, 491, 1256, 1753, 1828
BstFNI CGCG 2 cut(s) 408, 1519
BstH2I RGCGCY 2 cut(s) 182, 1391
BstHHI GCGC 2 cut(s) 181, 1390
BstMAI GTCTC 5 cut(s) 12, 457, 714, 987, 1533
BstMWI GCNNNNNNNGC 4 cut(s) 251, 608, 617, 860
BstNI CCWGG 2 cut(s) 970, 1333
BstNSI RCATGY 3 cut(s) 773, 1297, 1918
BstPAI GACNNNNGTC 1 cut(s) 1556
BstSCI CCNGG 3 cut(s) 714, 968, 1331
BstSFI CTRYAG 5 cut(s) 291, 747, 855, 1536, 1554
BstSLI GKGCMC 2 cut(s) 327, 1826
BstUI CGCG 2 cut(s) 408, 1519
BstV1I GCAGC 5 cut(s) 188, 277, 351, 1061, 1763
BstV2I GAAGAC 1 cut(s) 26
BstX2I RGATCY 5 cut(s) 508, 574, 997, 1094, 1126
BstXI CCANNNNNNTGG 1 cut(s) 445
BstYI RGATCY 5 cut(s) 508, 574, 997, 1094, 1126
BsuI GTATCC 1 cut(s) 907
BsuRI GGCC 5 cut(s) 753, 1086, 1382, 1646, 1849
BtgI CCRYGG 2 cut(s) 406, 937
BtgZI GCGATG 2 cut(s) 186, 1683
BtsCI GGATG 5 cut(s) 24, 491, 1256, 1753, 1828
BtsI GCAGTG 1 cut(s) 1424
BtsIMutI CAGTG 3 cut(s) 589, 636, 1424
Cac8I GCNNGC 4 cut(s) 568, 820, 1609, 1916
CaiI CAGNNNCTG 1 cut(s) 1145
CfoI GCGC 2 cut(s) 181, 1390
Cfr10I RCCGGY 2 cut(s) 514, 903
Cfr13I GGNCC 3 cut(s) 379, 410, 933
Cfr42I CCGCGG 1 cut(s) 409
CseI GACGC 2 cut(s) 529, 535
Csp6I GTAC 3 cut(s) 613, 1573, 1726
CspAI ACCGGT 2 cut(s) 514, 903
CviAII CATG 7 cut(s) 599, 761, 770, 783, 1259, 1294, 1915
CviQI GTAC 3 cut(s) 613, 1573, 1726
DdeI CTNAG 9 cut(s) 153, 441, 581, 1503, 1530, 1941, 1968, 1974, 1989
DrdI GACNNNNNNGTC 1 cut(s) 545
DseDI GACNNNNNNGTC 1 cut(s) 545
Eam1104I CTCTTC 1 cut(s) 1145
EarI CTCTTC 1 cut(s) 1145
Eco130I CCWWGG 2 cut(s) 1087, 1647
Eco147I AGGCCT 1 cut(s) 753
Eco31I GGTCTC 1 cut(s) 1533
Eco32I GATATC 1 cut(s) 1438
Eco47I GGWCC 3 cut(s) 379, 410, 933
Eco57I CTGAAG 1 cut(s) 986
EcoO109I RGGNCCY 1 cut(s) 933
EcoRI GAATTC 2 cut(s) 788, 1688
EcoRII CCWGG 2 cut(s) 968, 1331
EcoRV GATATC 1 cut(s) 1438
EcoT14I CCWWGG 2 cut(s) 1087, 1647
EcoT22I ATGCAT 1 cut(s) 1291
ErhI CCWWGG 2 cut(s) 1087, 1647
FaeI CATG 7 cut(s) 602, 764, 773, 786, 1262, 1297, 1918
FalI AAGNNNNNCTT 8 cut(s) 216, 248, 1142, 1174, 1337, 1369, 1657, 1689
FaqI GGGAC 2 cut(s) 1564, 1576
FatI CATG 7 cut(s) 598, 760, 769, 782, 1258, 1293, 1914
FauI CCCGC 1 cut(s) 413
FbaI TGATCA 2 cut(s) 72, 1780
Fnu4HI GCNGC 6 cut(s) 177, 291, 340, 767, 1050, 1752
FokI GGATG 5 cut(s) 31, 478, 1263, 1760, 1815
Fsp4HI GCNGC 6 cut(s) 177, 291, 340, 767, 1050, 1752
FspBI CTAG 5 cut(s) 1010, 1043, 1082, 1130, 1593
GlaI GCGC 2 cut(s) 180, 1389
GluI GCNGC 6 cut(s) 177, 291, 340, 767, 1050, 1752
GsaI CCCAGC 2 cut(s) 244, 574
GsuI CTGGAG 4 cut(s) 952, 1315, 1566, 1862
HaeII RGCGCY 2 cut(s) 182, 1391
HaeIII GGCC 5 cut(s) 753, 1086, 1382, 1646, 1849
HapII CCGG 6 cut(s) 377, 515, 716, 904, 1098, 1959
HgaI GACGC 2 cut(s) 529, 535
HhaI GCGC 2 cut(s) 181, 1390
Hin1II CATG 7 cut(s) 602, 764, 773, 786, 1262, 1297, 1918
Hin6I GCGC 2 cut(s) 179, 1388
HinP1I GCGC 2 cut(s) 179, 1388
HindIII AAGCTT 2 cut(s) 225, 1505
HinfI GANTC 6 cut(s) 201, 953, 962, 1155, 1514, 1616
HpaII CCGG 6 cut(s) 377, 515, 716, 904, 1098, 1959
HphI GGTGA 4 cut(s) 29, 362, 529, 1499
Hpy166II GTNNAC 3 cut(s) 325, 382, 1824
Hpy188I TCNGA 9 cut(s) 190, 802, 814, 997, 1005, 1171, 1533, 1621, 1637
Hpy8I GTNNAC 3 cut(s) 325, 382, 1824
Hpy99I CGWCG 3 cut(s) 170, 194, 1685
HpyCH4III ACNGT 6 cut(s) 194, 475, 594, 640, 1304, 1555
HpyCH4IV ACGT 1 cut(s) 1452
HpyF10VI GCNNNNNNNGC 4 cut(s) 251, 608, 617, 860
HpyF3I CTNAG 9 cut(s) 153, 441, 581, 1503, 1530, 1941, 1968, 1974, 1989
HpySE526I ACGT 1 cut(s) 1452
Hsp92II CATG 7 cut(s) 602, 764, 773, 786, 1262, 1297, 1918
HspAI GCGC 2 cut(s) 179, 1388
Kpn2I TCCGGA 1 cut(s) 1097
Ksp22I TGATCA 2 cut(s) 72, 1780
KspI CCGCGG 1 cut(s) 409
LmnI GCTCC 5 cut(s) 379, 543, 860, 1334, 1585
Lsp1109I GCAGC 5 cut(s) 188, 277, 351, 1061, 1763
LweI GCATC 5 cut(s) 163, 749, 805, 1327, 1738
MaeI CTAG 5 cut(s) 1010, 1043, 1082, 1130, 1593
MaeII ACGT 1 cut(s) 1452
MaeIII GTNAC 5 cut(s) 131, 282, 469, 517, 1980
MbiI CCGCTC 1 cut(s) 766
MflI RGATCY 5 cut(s) 508, 574, 997, 1094, 1126
MhlI GDGCHC 2 cut(s) 327, 1826
MlyI GAGTC 2 cut(s) 956, 962
MmeI TCCRAC 4 cut(s) 213, 1194, 1440, 1792
Mph1103I ATGCAT 1 cut(s) 1291
MroI TCCGGA 1 cut(s) 1097
MroXI GAANNNNTTC 1 cut(s) 1187
MseI TTAA 5 cut(s) 333, 561, 1523, 1805, 1869
MspA1I CMGCKG 3 cut(s) 408, 570, 1754
MspI CCGG 6 cut(s) 377, 515, 716, 904, 1098, 1959
MspR9I CCNGG 3 cut(s) 716, 970, 1333
Mva1269I GAATGC 1 cut(s) 1277
MvaI CCWGG 2 cut(s) 970, 1333
MvnI CGCG 2 cut(s) 408, 1519
MwoI GCNNNNNNNGC 4 cut(s) 251, 608, 617, 860
NciI CCSGG 1 cut(s) 716
NlaIII CATG 7 cut(s) 602, 764, 773, 786, 1262, 1297, 1918
NlaIV GGNNCC 7 cut(s) 510, 576, 935, 1096, 1256, 1330, 1963
NmeAIII GCCGAG 1 cut(s) 1364
NmuCI GTSAC 5 cut(s) 131, 282, 469, 517, 1980
NsiI ATGCAT 1 cut(s) 1291
NspI RCATGY 3 cut(s) 773, 1297, 1918
PaeI GCATGC 1 cut(s) 1918
PceI AGGCCT 1 cut(s) 753
PciI ACATGT 1 cut(s) 1293
PcsI WCGNNNNNNNCGW 2 cut(s) 534, 543
PctI GAATGC 1 cut(s) 1277
PdmI GAANNNNTTC 1 cut(s) 1187
PfeI GAWTC 4 cut(s) 201, 1155, 1514, 1616
PfoI TCCNGGA 1 cut(s) 714
PinAI ACCGGT 2 cut(s) 514, 903
PkrI GCNGC 6 cut(s) 178, 292, 341, 768, 1051, 1753
PleI GAGTC 2 cut(s) 956, 961
PpsI GAGTC 2 cut(s) 956, 961
PpuMI RGGWCCY 1 cut(s) 933
PscI ACATGT 1 cut(s) 1293
PshAI GACNNNNGTC 1 cut(s) 1556
PsiI TTATAA 2 cut(s) 776, 1110
Psp1406I AACGTT 1 cut(s) 1452
Psp5II RGGWCCY 1 cut(s) 933
Psp6I CCWGG 2 cut(s) 968, 1331
PspFI CCCAGC 2 cut(s) 240, 570
PspGI CCWGG 2 cut(s) 968, 1331
PspN4I GGNNCC 7 cut(s) 510, 576, 935, 1096, 1256, 1330, 1963
PspPI GGNCC 3 cut(s) 379, 410, 933
PspPPI RGGWCCY 1 cut(s) 933
PstI CTGCAG 1 cut(s) 295
PstNI CAGNNNCTG 1 cut(s) 1145
PsuI RGATCY 5 cut(s) 508, 574, 997, 1094, 1126
PvuII CAGCTG 2 cut(s) 570, 1754
RsaI GTAC 3 cut(s) 614, 1574, 1727
RsaNI GTAC 3 cut(s) 613, 1573, 1726
SacII CCGCGG 1 cut(s) 409
SaqAI TTAA 5 cut(s) 333, 561, 1523, 1805, 1869
SatI GCNGC 6 cut(s) 177, 291, 340, 767, 1050, 1752
Sau96I GGNCC 3 cut(s) 379, 410, 933
SchI GAGTC 2 cut(s) 956, 962
ScrFI CCNGG 3 cut(s) 716, 970, 1333
SduI GDGCHC 2 cut(s) 327, 1826
SfaNI GCATC 5 cut(s) 163, 749, 805, 1327, 1738
SfcI CTRYAG 5 cut(s) 291, 747, 855, 1536, 1554
Sfr303I CCGCGG 1 cut(s) 409
SgrAI CRCCGGYG 1 cut(s) 514
SgrBI CCGCGG 1 cut(s) 409
SinI GGWCC 3 cut(s) 379, 410, 933
SmlI CTYRAG 1 cut(s) 838
SmoI CTYRAG 1 cut(s) 838
SpeI ACTAGT 1 cut(s) 1042
SphI GCATGC 1 cut(s) 1918
SseBI AGGCCT 1 cut(s) 753
SsiI CCGC 5 cut(s) 406, 408, 766, 922, 1519
SspMI CTAG 5 cut(s) 1010, 1043, 1082, 1130, 1593
StuI AGGCCT 1 cut(s) 753
StyD4I CCNGG 3 cut(s) 714, 968, 1331
StyI CCWWGG 2 cut(s) 1087, 1647
TaaI ACNGT 6 cut(s) 194, 475, 594, 640, 1304, 1555
TaiI ACGT 1 cut(s) 1455
TaqI TCGA 4 cut(s) 138, 483, 666, 956
TauI GCSGC 1 cut(s) 769
TfiI GAWTC 4 cut(s) 201, 1155, 1514, 1616
Tru1I TTAA 5 cut(s) 333, 561, 1523, 1805, 1869
Tru9I TTAA 5 cut(s) 333, 561, 1523, 1805, 1869
TscAI CASTG 3 cut(s) 589, 643, 1424
TseFI GTSAC 5 cut(s) 131, 282, 469, 517, 1980
TseI GCWGC 5 cut(s) 176, 290, 339, 1049, 1751
Tsp45I GTSAC 5 cut(s) 131, 282, 469, 517, 1980
TspDTI ATGAA 6 cut(s) 193, 237, 1180, 1382, 1418, 1803
TspGWI ACGGA 2 cut(s) 619, 1698
TspRI CASTG 3 cut(s) 589, 643, 1424
VneI GTGCAC 2 cut(s) 323, 1822
VpaK11BI GGWCC 3 cut(s) 379, 410, 933
XapI RAATTY 5 cut(s) 661, 673, 788, 991, 1688
XceI RCATGY 3 cut(s) 773, 1297, 1918
XmnI GAANNNNTTC 1 cut(s) 1187
XspI CTAG 5 cut(s) 1010, 1043, 1082, 1130, 1593
Zsp2I ATGCAT 1 cut(s) 1291
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.