MD11G1254900.v1.1

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Reverse (-)
36764832 .. 36766928
2097 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1254900.v1.1.491

Sequence Viewer

Length: 2097 bp
ATGTCAATTTTCCAGTCTCTCTCTCTCAAAACAAAAATGGATCACAAAAGCTCTCCAATCATCACACCAATTCACTCACCAAACCATCTTCTATTCGTCATTGTCTTGCTTCTTTTATTCCATTATGCAACTCCATTAACCTACAATTTCTCCAGCTTTCCCAACAGCACTATCAACAGTTCGATATCTCTAGAGGGAGATGCTTATACTGACGGCCAATTCATCCAACTCGCCAAAATCTATGAAACAGCCGCACTTAGAAAGAACGGGAGCGTCGGTCGAGTAACTTACCGCGAACCCTTCCTCCTCCGTGAAAACGCCACTGGAAAACTTGGCGATTTCACCACACATTTCACGTTTGAAATGGACCCGCTAAACAATAAATATGCCGACGGGCTCGCCTTCTTCGTGGCGCCAAACGGTTCCTTGCTCAACTACACACTAGGAAGAGGCGGCAGCCTCGGCCTCCCCGTGGAGCACCTAAACTCAACTCAGTCAAGGAGTCAGTATCCCTTTGTTGCGGTGGAGTTTGATATCTACTGGAATGCGAGGTCAAACATCGGTGACCCGGAAGGCGATCATGTGGGAATCGACATCAACTCTGTCAAGTCTTATATCACCACCAAGCCTTGGAATGGAAGTATTTTGGATGGGAAGCAAAATGGTGCTTGGATTAGTTATAATTCCGGCTCAAAAAATCTTAGTGTTGCTTTCACTAGTTATGTAAATGGTAGCCAGTTGACGACTTATCTTGATTACATAGTTAATCTGGAACAATACTTACCGGATTGGGTCATTGTTGGGTTCTCCGCTGCCTCCGGTGCTCGGACAACTCAATTCATGATCAAATCATGGAGTTTCAATTCTACACTAGTTCCTCCGCCAAGATCCAGCTCAGGAAGTAACAATATAGCACTGGCTGTTGGGTTGGGCCTCGGTGGATTTATTGCGTTGGTAAGTTTTGTTTTGTGTATCTTGTGGAAGAAAAGGGCACGAGGAAAAACTAATACCAATGAAGACCCTACAATTCATGAGTTGATTGATGGCGAATTTGGAAAAGGGACCAGCCCAAGGATGTTTTCATACAAAGAGTTGGCTTTAGCAACAAGTAATTTTGCAGAGGTAGAAAAGCTTGGAGAGGGAGGATTTGGTGGGGTTTATCGAGGATATATAAAAGACTTGAAGTCATATGTTGCTGTCAAGAAGATATCAAGCAAATCTAAACAAGGGTTGAAGGAGTTTGCATCTGAAGTAAGGATCATTAGTCAACTTAGGCATCGAAATCTTGTGCAACTCATTGGTTGGTGCCACAAAAAGAAACTCCTACTCGTGTATGAGTTTATGCCCAATGGCAGCCTTGATTCTCATCTTTTCGCTGAAAAATGCTTATTACTTTGGGGGTTAAGATACAAAATTGCTCAAGGCTTGGCCTCTGGGTTGCTCTATCTACACCAAGAGTGGGAGCAATGCGTGCTACACAGGGATATCAAATCTAGCAATGTTATGTTGGATTCAAATTTCAATGCTAAACTTGGTGATTTTGGGCTAGCTCGACTTGTTGATCATGGAAAACAATCTCAAACAACAATAGTGGCTGGAACAAGGGGCTACATGGCTTTGGAATATGTTATCACAGGAAAGGCTAGCAAGGAATCAGATGTCTACAGCTTCGGAATTGTTGCTTTGGAAATAGCATGTGGGAGAAAACCCATCGATCTCGGTTTAGAGAGTAGCCAAGTTGAAATGGTGGAATGGGTTTGGGAGCTTTACGGAGAAGGGAAAGTCATTGAAGCAGCTGACCCGAAACTGCACGGAGATTTTGATGAAAAAGAGATGGAGTGTTTGTTGATTGTCGGGTTGTGGTGTGCTCATCCGGACTATCACTTTAGGCCTTCCATACAACGAGCGATTCAAGTGCTTAACTTTGAAGTTCCGTTGCCCATTCTCCCAACAAACATGCCTGTAGCCACATATTTAGCTCCTCCAGTAGTACTCTCAATGTTGTCTGGTGATACTAGTACTACTACAAGCTATGAAAAAGGGCAAACGTCTCATCGGTCATCTGGGAGTGCGTTTTCTTATAGAACTGGTTCGTGA

Protein Analysis

699

Amino Acids

77.27

Weight (kDa)

7.64

Isoelectric Point (pI)

29.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 47 - 296 5e-58 Legume lectin domain
Lectin_L-type_dom PF18483 58 - 279 4.2e-06 Legume lectin beta-barrel domain
Pkinase PF00069 373 - 580 2.3e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 375 - 572 1.3e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 681
AccB1I GGYRCC 2 cut(s) 412, 1305
AccB7I CCANNNNNTGG 1 cut(s) 630
AccI GTMKAC 1 cut(s) 1662
AccII CGCG 1 cut(s) 294
AccIII TCCGGA 1 cut(s) 1873
AciI CCGC 7 cut(s) 252, 292, 371, 453, 521, 810, 881
AclWI GGATC 3 cut(s) 48, 882, 1265
AcoI YGGCCR 1 cut(s) 214
AcsI RAATTY 2 cut(s) 1049, 1516
AcuI CTGAAG 1 cut(s) 1269
AcyI GRCGYC 1 cut(s) 413
AfaI GTAC 2 cut(s) 1992, 2020
AfiI CCNNNNNNNGG 6 cut(s) 472, 630, 635, 825, 1071, 1459
AhdI GACNNNNNGTC 1 cut(s) 1183
AhlI ACTAGT 3 cut(s) 716, 871, 2015
AjuI GAANNNNNNNTTGG 2 cut(s) 1063, 1095
AloI GAACNNNNNNTCC 2 cut(s) 288, 320
Alw21I GWGCWC 3 cut(s) 480, 826, 1870
Alw26I GTCTC 2 cut(s) 21, 2055
AlwI GGATC 3 cut(s) 48, 882, 1265
Aor13HI TCCGGA 1 cut(s) 1873
AoxI GGCC 5 cut(s) 214, 463, 931, 1428, 1889
ApeKI GCWGC 4 cut(s) 456, 812, 1353, 1793
ApoI RAATTY 2 cut(s) 1049, 1516
Asp700I GAANNNNTTC 1 cut(s) 2089
AspLEI GCGC 1 cut(s) 415
AspS9I GGNCC 3 cut(s) 367, 931, 1062
AsuC2I CCSGG 1 cut(s) 569
AsuHPI GGTGA 6 cut(s) 69, 334, 575, 610, 1547, 2021
AsuNHI GCTAGC 2 cut(s) 1546, 1643
AvaII GGWCC 2 cut(s) 367, 1062
BaeGI GKGCMC 1 cut(s) 994
BanI GGYRCC 2 cut(s) 412, 1305
BanII GRGCYC 1 cut(s) 399
BauI CACGAG 2 cut(s) 993, 1328
BbsI GAAGAC 1 cut(s) 1023
Bbv12I GWGCWC 3 cut(s) 480, 826, 1870
BbvI GCAGC 4 cut(s) 468, 799, 1365, 1805
BccI CCATC 5 cut(s) 93, 644, 1037, 1718, 1828
BceAI ACGGC 1 cut(s) 229
BcgI CGANNNNNNTGC 2 cut(s) 1897, 1931
BciVI GTATCC 1 cut(s) 519
BclI TGATCA 2 cut(s) 843, 1561
BcnI CCSGG 1 cut(s) 569
BcoDI GTCTC 2 cut(s) 21, 2055
BcuI ACTAGT 3 cut(s) 716, 871, 2015
BfaI CTAG 8 cut(s) 191, 443, 717, 872, 1494, 1547, 1644, 2016
BfmI CTRYAG 2 cut(s) 1663, 1962
BfoI RGCGCY 1 cut(s) 416
BfuI GTATCC 1 cut(s) 519
BisI GCNGC 6 cut(s) 252, 454, 457, 813, 1354, 1794
BlsI GCNGC 6 cut(s) 253, 455, 458, 814, 1355, 1795
BmcAI AGTACT 2 cut(s) 1992, 2020
Bme1390I CCNGG 1 cut(s) 569
Bme18I GGWCC 2 cut(s) 367, 1062
BmeRI GACNNNNNGTC 1 cut(s) 1183
BmgT120I GGNCC 3 cut(s) 367, 931, 1062
BmiI GGNNCC 5 cut(s) 369, 414, 424, 1063, 1307
BmrFI CCNGG 1 cut(s) 569
BmsI GCATC 3 cut(s) 190, 1253, 1285
BmtI GCTAGC 2 cut(s) 1550, 1647
BpiI GAAGAC 1 cut(s) 1023
BpmI CTGGAG 2 cut(s) 136, 1968
Bpu10I CCTNAGC 1 cut(s) 895
BpuEI CTTGAG 1 cut(s) 1404
BpuMI CCSGG 1 cut(s) 569
Bsa29I ATCGAT 1 cut(s) 1713
BsaBI GATNNNNATC 1 cut(s) 1365
BsaHI GRCGYC 1 cut(s) 413
BsaJI CCNNGG 5 cut(s) 460, 471, 629, 934, 1070
BsaWI WCCGGW 3 cut(s) 784, 818, 1873
BsaXI ACNNNNNCTCC 8 cut(s) 134, 164, 262, 288, 292, 318, 1829, 1859
Bsc4I CCNNNNNNNGG 6 cut(s) 472, 630, 635, 825, 1071, 1459
Bse1I ACTGG 7 cut(s) 13, 328, 545, 736, 921, 1985, 2092
Bse3DI GCAATG 2 cut(s) 1472, 1504
Bse8I GATNNNNATC 1 cut(s) 1365
BseAI TCCGGA 1 cut(s) 1873
BseCI ATCGAT 1 cut(s) 1713
BseDI CCNNGG 5 cut(s) 460, 471, 629, 934, 1070
BseGI GGATG 4 cut(s) 222, 655, 1080, 1870
BseJI GATNNNNATC 1 cut(s) 1365
BseLI CCNNNNNNNGG 6 cut(s) 472, 630, 635, 825, 1071, 1459
BseMI GCAATG 2 cut(s) 1472, 1504
BseMII CTCAG 2 cut(s) 506, 909
BseNI ACTGG 7 cut(s) 13, 328, 545, 736, 921, 1985, 2092
BseRI GAGGAG 2 cut(s) 296, 1971
BseSI GKGCMC 1 cut(s) 994
BseXI GCAGC 4 cut(s) 468, 799, 1365, 1805
BsgI GTGCAG 1 cut(s) 1793
Bsh1236I CGCG 1 cut(s) 294
Bsh1285I CGRYCG 1 cut(s) 280
BshFI GGCC 5 cut(s) 216, 465, 933, 1430, 1891
BshNI GGYRCC 2 cut(s) 412, 1305
BshVI ATCGAT 1 cut(s) 1713
BsiEI CGRYCG 1 cut(s) 280
BsiHKAI GWGCWC 3 cut(s) 480, 826, 1870
BsiSI CCGG 5 cut(s) 569, 687, 785, 819, 1874
BslFI GGGAC 1 cut(s) 1075
BslI CCNNNNNNNGG 6 cut(s) 472, 630, 635, 825, 1071, 1459
BsmAI GTCTC 2 cut(s) 21, 2055
BsmBI CGTCTC 1 cut(s) 2055
BsmFI GGGAC 1 cut(s) 1075
BsmI GAATGC 1 cut(s) 550
BsnI GGCC 5 cut(s) 216, 465, 933, 1430, 1891
Bsp1286I GDGCHC 5 cut(s) 399, 480, 826, 994, 1870
Bsp13I TCCGGA 1 cut(s) 1873
Bsp143I GATC 7 cut(s) 40, 577, 843, 887, 1257, 1561, 1714
BspACI CCGC 7 cut(s) 252, 292, 371, 453, 521, 810, 881
BspANI GGCC 5 cut(s) 216, 465, 933, 1430, 1891
BspCNI CTCAG 2 cut(s) 505, 908
BspDI ATCGAT 1 cut(s) 1713
BspEI TCCGGA 1 cut(s) 1873
BspFNI CGCG 1 cut(s) 294
BspHI TCATGA 2 cut(s) 840, 1030
BspLI GGNNCC 5 cut(s) 369, 414, 424, 1063, 1307
BspOI GCTAGC 2 cut(s) 1550, 1647
BspPI GGATC 3 cut(s) 48, 882, 1265
BspT107I GGYRCC 2 cut(s) 412, 1305
BsrDI GCAATG 2 cut(s) 1472, 1504
BsrI ACTGG 7 cut(s) 13, 328, 545, 736, 921, 1985, 2092
BssECI CCNNGG 5 cut(s) 460, 471, 629, 934, 1070
BssMI GATC 7 cut(s) 40, 577, 843, 887, 1257, 1561, 1714
BssNI GRCGYC 1 cut(s) 413
BssSI CACGAG 2 cut(s) 993, 1328
BssT1I CCWWGG 2 cut(s) 629, 1070
Bst2BI CACGAG 2 cut(s) 993, 1328
Bst4CI ACNGT 2 cut(s) 179, 422
Bst6I CTCTTC 1 cut(s) 442
BstACI GRCGYC 1 cut(s) 413
BstAPI GCANNNNNTGC 1 cut(s) 1471
BstC8I GCNNGC 4 cut(s) 399, 1472, 1548, 1645
BstDEI CTNAG 5 cut(s) 257, 492, 701, 895, 1271
BstDSI CCRYGG 1 cut(s) 471
BstEII GGTNACC 1 cut(s) 563
BstF5I GGATG 4 cut(s) 222, 655, 1080, 1870
BstFNI CGCG 1 cut(s) 294
BstH2I RGCGCY 1 cut(s) 416
BstHHI GCGC 1 cut(s) 415
BstKTI GATC 7 cut(s) 43, 580, 846, 890, 1260, 1564, 1717
BstMAI GTCTC 2 cut(s) 21, 2055
BstMBI GATC 7 cut(s) 40, 577, 843, 887, 1257, 1561, 1714
BstMCI CGRYCG 1 cut(s) 280
BstMWI GCNNNNNNNGC 3 cut(s) 462, 821, 1471
BstNSI RCATGY 2 cut(s) 1698, 1960
BstPI GGTNACC 1 cut(s) 563
BstSCI CCNGG 1 cut(s) 567
BstSFI CTRYAG 2 cut(s) 1663, 1962
BstSLI GKGCMC 1 cut(s) 994
BstUI CGCG 1 cut(s) 294
BstV1I GCAGC 4 cut(s) 468, 799, 1365, 1805
BstV2I GAAGAC 1 cut(s) 1023
BstX2I RGATCY 1 cut(s) 887
BstYI RGATCY 1 cut(s) 887
Bsu15I ATCGAT 1 cut(s) 1713
BsuI GTATCC 1 cut(s) 519
BsuRI GGCC 5 cut(s) 216, 465, 933, 1430, 1891
BsuTUI ATCGAT 1 cut(s) 1713
BtgI CCRYGG 1 cut(s) 471
BtsCI GGATG 4 cut(s) 222, 655, 1080, 1870
BtsIMutI CAGTG 2 cut(s) 321, 914
Cac8I GCNNGC 4 cut(s) 399, 1472, 1548, 1645
CciI TCATGA 2 cut(s) 840, 1030
CfoI GCGC 1 cut(s) 415
Cfr13I GGNCC 3 cut(s) 367, 931, 1062
ClaI ATCGAT 1 cut(s) 1713
CseI GACGC 1 cut(s) 262
Csp6I GTAC 2 cut(s) 1991, 2019
CspCI CAANNNNNGTGG 2 cut(s) 1572, 1607
CviAII CATG 8 cut(s) 581, 841, 852, 1031, 1565, 1612, 1695, 1957
CviQI GTAC 2 cut(s) 1991, 2019
DdeI CTNAG 5 cut(s) 257, 492, 701, 895, 1271
DinI GGCGCC 1 cut(s) 414
DpnI GATC 7 cut(s) 42, 579, 845, 889, 1259, 1563, 1716
DpnII GATC 7 cut(s) 40, 577, 843, 887, 1257, 1561, 1714
DriI GACNNNNNGTC 1 cut(s) 1183
EaeI YGGCCR 1 cut(s) 214
Eam1104I CTCTTC 1 cut(s) 442
Eam1105I GACNNNNNGTC 1 cut(s) 1183
EarI CTCTTC 1 cut(s) 442
EciI GGCGGA 1 cut(s) 870
Eco130I CCWWGG 2 cut(s) 629, 1070
Eco147I AGGCCT 1 cut(s) 1891
Eco24I GRGCYC 1 cut(s) 399
Eco32I GATATC 4 cut(s) 186, 535, 1209, 1486
Eco47I GGWCC 2 cut(s) 367, 1062
Eco57I CTGAAG 1 cut(s) 1269
Eco91I GGTNACC 1 cut(s) 563
EcoO65I GGTNACC 1 cut(s) 563
EcoRV GATATC 4 cut(s) 186, 535, 1209, 1486
EcoT14I CCWWGG 2 cut(s) 629, 1070
EcoT38I GRGCYC 1 cut(s) 399
EgeI GGCGCC 1 cut(s) 414
EheI GGCGCC 1 cut(s) 414
ErhI CCWWGG 2 cut(s) 629, 1070
Esp3I CGTCTC 1 cut(s) 2055
FaeI CATG 8 cut(s) 584, 844, 855, 1034, 1568, 1615, 1698, 1960
FaqI GGGAC 1 cut(s) 1075
FatI CATG 8 cut(s) 580, 840, 851, 1030, 1564, 1611, 1694, 1956
FauI CCCGC 1 cut(s) 378
FauNDI CATATG 1 cut(s) 1189
FbaI TGATCA 2 cut(s) 843, 1561
FblI GTMKAC 1 cut(s) 1662
Fnu4HI GCNGC 6 cut(s) 252, 454, 457, 813, 1354, 1794
FokI GGATG 4 cut(s) 209, 662, 1087, 1857
FriOI GRGCYC 1 cut(s) 399
Fsp4HI GCNGC 6 cut(s) 252, 454, 457, 813, 1354, 1794
FspBI CTAG 8 cut(s) 191, 443, 717, 872, 1494, 1547, 1644, 2016
GlaI GCGC 1 cut(s) 414
GluI GCNGC 6 cut(s) 252, 454, 457, 813, 1354, 1794
GsuI CTGGAG 2 cut(s) 136, 1968
HaeII RGCGCY 1 cut(s) 416
HaeIII GGCC 5 cut(s) 216, 465, 933, 1430, 1891
HapII CCGG 5 cut(s) 569, 687, 785, 819, 1874
HgaI GACGC 1 cut(s) 262
HhaI GCGC 1 cut(s) 415
Hin1I GRCGYC 1 cut(s) 413
Hin1II CATG 8 cut(s) 584, 844, 855, 1034, 1568, 1615, 1698, 1960
Hin6I GCGC 1 cut(s) 413
HinP1I GCGC 1 cut(s) 413
HincII GTYRAC 2 cut(s) 741, 1268
HindII GTYRAC 2 cut(s) 741, 1268
HindIII AAGCTT 1 cut(s) 1130
HinfI GANTC 6 cut(s) 502, 588, 1361, 1511, 1652, 1909
HpaII CCGG 5 cut(s) 569, 687, 785, 819, 1874
HphI GGTGA 6 cut(s) 69, 334, 575, 610, 1547, 2021
Hpy166II GTNNAC 3 cut(s) 741, 1268, 1663
Hpy188I TCNGA 4 cut(s) 828, 1249, 1657, 1673
Hpy188III TCNNGA 9 cut(s) 191, 752, 770, 841, 897, 1031, 1201, 1874, 2094
Hpy8I GTNNAC 3 cut(s) 741, 1268, 1663
Hpy99I CGWCG 2 cut(s) 278, 395
HpyAV CCTTC 6 cut(s) 310, 412, 566, 1228, 1769, 1902
HpyCH4III ACNGT 2 cut(s) 179, 422
HpyCH4IV ACGT 2 cut(s) 356, 2048
HpyCH4V TGCA 5 cut(s) 128, 1118, 1244, 1291, 1810
HpyF10VI GCNNNNNNNGC 3 cut(s) 462, 821, 1471
HpyF3I CTNAG 5 cut(s) 257, 492, 701, 895, 1271
HpySE526I ACGT 2 cut(s) 356, 2048
Hsp92I GRCGYC 1 cut(s) 413
Hsp92II CATG 8 cut(s) 584, 844, 855, 1034, 1568, 1615, 1698, 1960
HspAI GCGC 1 cut(s) 413
KasI GGCGCC 1 cut(s) 412
Kpn2I TCCGGA 1 cut(s) 1873
Ksp22I TGATCA 2 cut(s) 843, 1561
Kzo9I GATC 7 cut(s) 40, 577, 843, 887, 1257, 1561, 1714
LmnI GCTCC 5 cut(s) 270, 475, 1462, 1762, 1984
Lsp1109I GCAGC 4 cut(s) 468, 799, 1365, 1805
LweI GCATC 3 cut(s) 190, 1253, 1285
MaeI CTAG 8 cut(s) 191, 443, 717, 872, 1494, 1547, 1644, 2016
MaeII ACGT 2 cut(s) 356, 2048
MaeIII GTNAC 3 cut(s) 283, 563, 902
MalI GATC 7 cut(s) 42, 579, 845, 889, 1259, 1563, 1716
MboI GATC 7 cut(s) 40, 577, 843, 887, 1257, 1561, 1714
MboII GAAGA 6 cut(s) 80, 397, 459, 994, 1028, 1216
MflI RGATCY 1 cut(s) 887
MhlI GDGCHC 5 cut(s) 399, 480, 826, 994, 1870
Mly113I GGCGCC 1 cut(s) 413
MlyI GAGTC 1 cut(s) 511
MmeI TCCRAC 2 cut(s) 250, 1488
MroI TCCGGA 1 cut(s) 1873
MroXI GAANNNNTTC 1 cut(s) 2089
MseI TTAA 4 cut(s) 137, 765, 1403, 1920
MspA1I CMGCKG 2 cut(s) 812, 1796
MspI CCGG 5 cut(s) 569, 687, 785, 819, 1874
MspR9I CCNGG 1 cut(s) 569
Mva1269I GAATGC 1 cut(s) 550
MvnI CGCG 1 cut(s) 294
MwoI GCNNNNNNNGC 3 cut(s) 462, 821, 1471
NarI GGCGCC 1 cut(s) 413
NciI CCSGG 1 cut(s) 569
NdeI CATATG 1 cut(s) 1189
NdeII GATC 7 cut(s) 40, 577, 843, 887, 1257, 1561, 1714
NheI GCTAGC 2 cut(s) 1546, 1643
NlaIII CATG 8 cut(s) 584, 844, 855, 1034, 1568, 1615, 1698, 1960
NlaIV GGNNCC 5 cut(s) 369, 414, 424, 1063, 1307
NmeAIII GCCGAG 1 cut(s) 441
NmuCI GTSAC 1 cut(s) 563
NspI RCATGY 2 cut(s) 1698, 1960
PagI TCATGA 2 cut(s) 840, 1030
PceI AGGCCT 1 cut(s) 1891
PcsI WCGNNNNNNNCGW 2 cut(s) 405, 468
PctI GAATGC 1 cut(s) 550
PdmI GAANNNNTTC 1 cut(s) 2089
PfeI GAWTC 5 cut(s) 588, 1361, 1511, 1652, 1909
PflMI CCANNNNNTGG 1 cut(s) 630
PkrI GCNGC 6 cut(s) 253, 455, 458, 814, 1355, 1795
PleI GAGTC 1 cut(s) 510
PluTI GGCGCC 1 cut(s) 416
PpsI GAGTC 1 cut(s) 510
PsiI TTATAA 1 cut(s) 681
PspEI GGTNACC 1 cut(s) 563
PspN4I GGNNCC 5 cut(s) 369, 414, 424, 1063, 1307
PspPI GGNCC 3 cut(s) 367, 931, 1062
PsrI GAACNNNNNNTAC 2 cut(s) 765, 797
PsuI RGATCY 1 cut(s) 887
PvuII CAGCTG 1 cut(s) 1796
RsaI GTAC 2 cut(s) 1992, 2020
RsaNI GTAC 2 cut(s) 1991, 2019
SaqAI TTAA 4 cut(s) 137, 765, 1403, 1920
SatI GCNGC 6 cut(s) 252, 454, 457, 813, 1354, 1794
Sau3AI GATC 7 cut(s) 40, 577, 843, 887, 1257, 1561, 1714
Sau96I GGNCC 3 cut(s) 367, 931, 1062
ScaI AGTACT 2 cut(s) 1992, 2020
SchI GAGTC 1 cut(s) 511
ScrFI CCNGG 1 cut(s) 569
SduI GDGCHC 5 cut(s) 399, 480, 826, 994, 1870
SfaNI GCATC 3 cut(s) 190, 1253, 1285
SfcI CTRYAG 2 cut(s) 1663, 1962
SfoI GGCGCC 1 cut(s) 414
SinI GGWCC 2 cut(s) 367, 1062
SmlI CTYRAG 1 cut(s) 1419
SmoI CTYRAG 1 cut(s) 1419
SpeI ACTAGT 3 cut(s) 716, 871, 2015
SseBI AGGCCT 1 cut(s) 1891
SsiI CCGC 7 cut(s) 252, 292, 371, 453, 521, 810, 881
SspDI GGCGCC 1 cut(s) 412
SspMI CTAG 8 cut(s) 191, 443, 717, 872, 1494, 1547, 1644, 2016
StuI AGGCCT 1 cut(s) 1891
StyD4I CCNGG 1 cut(s) 567
StyI CCWWGG 2 cut(s) 629, 1070
TaaI ACNGT 2 cut(s) 179, 422
TaiI ACGT 2 cut(s) 359, 2051
TaqI TCGA 7 cut(s) 182, 280, 591, 1162, 1279, 1552, 1713
TaqII GACCGA 2 cut(s) 266, 2046
TatI WGTACW 2 cut(s) 1990, 2018
TauI GCSGC 2 cut(s) 254, 456
TfiI GAWTC 5 cut(s) 588, 1361, 1511, 1652, 1909
Tru1I TTAA 4 cut(s) 137, 765, 1403, 1920
Tru9I TTAA 4 cut(s) 137, 765, 1403, 1920
TscAI CASTG 2 cut(s) 328, 921
TseFI GTSAC 1 cut(s) 563
TseI GCWGC 4 cut(s) 456, 812, 1353, 1793
Tsp45I GTSAC 1 cut(s) 563
TspDTI ATGAA 8 cut(s) 211, 258, 829, 1019, 1029, 1071, 1839, 2049
TspGWI ACGGA 4 cut(s) 299, 1785, 1827, 1923
TspRI CASTG 2 cut(s) 328, 921
Van91I CCANNNNNTGG 1 cut(s) 630
VpaK11BI GGWCC 2 cut(s) 367, 1062
XapI RAATTY 2 cut(s) 1049, 1516
XbaI TCTAGA 1 cut(s) 190
XceI RCATGY 2 cut(s) 1698, 1960
XmiI GTMKAC 1 cut(s) 1662
XmnI GAANNNNTTC 1 cut(s) 2089
XspI CTAG 8 cut(s) 191, 443, 717, 872, 1494, 1547, 1644, 2016
ZrmI AGTACT 2 cut(s) 1992, 2020
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.