Rw5G020620

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
27212934 .. 27216836
3903 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G020620.1

Sequence Viewer

Length: 2064 bp
ATGGCTGTCAAAAACACATTCCGATTATTCCTAAAGCAGTTTCAATTGGTTCTTCTTCTCTTAATACTGTTGCCCTTCTCTGCAACACCATTGACCTTCAATTTCCCCAGCTTTGCCCTTGATGTTACCGCCAATGTATCTATATCTATGGAGGGAGATGCTTTGCTCGATGGGGCCCTCCGCCTCACCAAAAGTACCGTCGACTTTCAAAAGTACCAAAGCGTCGGCCGAGCGACCTATCACCAACCCTTCCTCCTCCGCCAAAAATCCACCGGAAAACTCGCTGATTTTACATCAAGTTTCAAGTTCGCCATTGACTCCGGCAACAGCACCTCCTACGGTGATGGGCTGGCCTTCTTCATAGCGCCGGCCGGGTCCTCACTGAACTCCAGATTAGGGGAAGGTAGAAGTCTTGGCCTCCCTGTCAACACTACGCTGGAAAACTATACCATGTGGACTACTGAATACCCGTTTGTGGCGGTCGAGTTTGATATCTTCCCCAATATTATCGTTGATTGGGGTGTAAATTACACTCATGTGGGCATCGACATCAACTCCGTCAGGTCTAAAGTTACCGAGCCATGGACTGGTGGTATTATGACAGGGAATGAAAATAATGCCACAGTTACATACAACTCCACCTCGAAAAATCTTAGTGTTGCCTTCACTACGTTTGAAAACGAAGTCCAGGTGATCAAAAATTTTTATTTCTCAGTTGATCTGCTCCAATACTTGCCCGATAGGGTCATTGTTGGTTTCTCGGCAGCAACAGGTGCTCTGACTGCTCTACATAAGATCAATTCTTGGAGCTTTGATTCAACTCCATTGGTAGATGAAAACAGCACATCAATTTTATCTGATCCAAAGGTAAAACCCAAGTCAGGAAATGCCAATGTTAGACTAGTAGTTGGGTTGGTTGTTGGGGGAGCTGTTATCTTGGCTGGTGTGTTGGGTTTGCTTTGGTTCATCTTCTGCAGGAAGAGGAAGGAAACAGCTGATGAAAGTAGTGATGATGATACTGGGATACTTCATGATTTGAACCCTGAAGAATTCGAAAAGGGGACAGGCCCAAAGAAGTTTTCATACAATGAATTGGCCCTTGCAACTAGTAATTTTGAAAAGGGAGAAAAGCTTGGGGAGGGAGGGTTTGGTGGAGTTTACAAGGGCTTCATCAAAGATATGAACACGTATGTAGCTGTTAAGAAGATATCAAGGGGGTCTAAACAAGGGCTGAAGGAGTATGGAGCAGAAGTGAGTATCATTAGTCGGCTAAGGCATCGGAATCTGGTCCAACTCATCGGTTGGTGTTATGAAAAGAAACTCCTACTTGTCTACGAATTTATGCCCAATGGTTGCTTGGATTCTCATTTGTTCAAAGAAAAAAGTTTGTTAACTTGGGATGTAAGATACAAAATTGCACATGGATTGGCCTCGGGATTGCTCTATCTACACCAAGGATGGGAGCAATGTGTGCTGCACAGGGATATCAAATCCAGCAATGTTATGCTGGATTCCAATTTTAACGCGAAACTTGGAGATTTTGGGTTAGCCAAACTTGTAGACCATGGAAAACTATCGAAAACAACAATTGTGGCCGGAACCATGGGCTACATGGCTACGGAATATGTTACAACGGGAAAGGCTAGCAAGGAAACAGATGTCTATAGTTTTGGAGTTGTTGCTTTGGAAATAGCTTGTGGGAGAAAACCAATTGATCACAGCTATGAAGAAAAACAGAGCAATATGGTCGAGTGGGTTTGGGAGCTCTATGGAGAAGGGAAAATCATTGAAGCAGCCGACCCAAGATTGTGCGGGGAATTTGATGAGAAGCAAATGGAGTGCTTGATGAAGGTTGGGTTATGGTGTGCTCATCCGGATTACAACTCTAGGCCTTTGATACAACAAGCAATCCAAGTGCTTAACTTTGAAATTCCATTCCCCAATCTCCCATTGACTATGCCGGTGCCCTTTGCTCTAACTGTCGATGTCTACAGGATGTCTCACTCAAAACTCTCAGCGCAAGCTCCAGAATGTTGCTCCAAACTTCCTCAAATATGGGGCTAA

Protein Analysis

687

Amino Acids

76.24

Weight (kDa)

6.27

Isoelectric Point (pI)

24.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 31 - 282 6e-58 Legume lectin domain
Pkinase PF00069 372 - 638 1.7e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 373 - 583 1.9e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1963
AccB7I CCANNNNNTGG 1 cut(s) 587
AccI GTMKAC 4 cut(s) 201, 1332, 1560, 1989
AccII CGCG 1 cut(s) 1526
AccIII TCCGGA 1 cut(s) 1873
AciI CCGC 5 cut(s) 129, 181, 259, 479, 1812
AclWI GGATC 1 cut(s) 854
AcoI YGGCCR 3 cut(s) 226, 369, 1593
AcsI RAATTY 5 cut(s) 700, 1049, 1337, 1817, 1929
AcuI CTGAAG 2 cut(s) 1065, 1253
AfaI GTAC 2 cut(s) 196, 215
AfiI CCNNNNNNNGG 6 cut(s) 396, 475, 582, 587, 881, 1459
AflIII ACRYGT 1 cut(s) 1185
AhlI ACTAGT 2 cut(s) 901, 1106
AjnI CCWGG 1 cut(s) 687
AjuI GAANNNNNNNTTGG 2 cut(s) 1063, 1095
AleI CACNNNNGTG 1 cut(s) 536
Alw21I GWGCWC 3 cut(s) 778, 1767, 1870
Alw26I GTCTC 1 cut(s) 2004
AlwI GGATC 1 cut(s) 854
Ama87I CYCGRG 1 cut(s) 1432
Aor13HI TCCGGA 1 cut(s) 1873
ApaI GGGCCC 1 cut(s) 178
ApeKI GCWGC 3 cut(s) 764, 1474, 1793
ApoI RAATTY 5 cut(s) 700, 1049, 1337, 1817, 1929
ArsI GACNNNNNNTTYG 2 cut(s) 183, 215
AspLEI GCGC 2 cut(s) 367, 2020
AspS9I GGNCC 6 cut(s) 174, 175, 375, 1067, 1096, 1288
AsuC2I CCSGG 1 cut(s) 373
AsuHPI GGTGA 4 cut(s) 178, 233, 353, 703
AsuII TTCGAA 1 cut(s) 1053
AsuNHI GCTAGC 1 cut(s) 1643
AvaI CYCGRG 1 cut(s) 1432
AvaII GGWCC 2 cut(s) 375, 1288
BaeGI GKGCMC 2 cut(s) 178, 1968
BanI GGYRCC 1 cut(s) 1963
BanII GRGCYC 2 cut(s) 178, 1767
BarI GAAGNNNNNNTAC 2 cut(s) 1067, 1099
Bbv12I GWGCWC 3 cut(s) 778, 1767, 1870
BbvI GCAGC 3 cut(s) 776, 1461, 1805
BccI CCATC 3 cut(s) 164, 338, 1452
BcgI CGANNNNNNTGC 2 cut(s) 1729, 1763
BciT130I CCWGG 1 cut(s) 689
BciVI GTATCC 1 cut(s) 1017
BclI TGATCA 2 cut(s) 693, 1714
BcnI CCSGG 1 cut(s) 373
BcoDI GTCTC 1 cut(s) 2004
BcuI ACTAGT 2 cut(s) 901, 1106
BfaI CTAG 4 cut(s) 902, 1107, 1644, 1887
BfmI CTRYAG 3 cut(s) 973, 1663, 1990
BfoI RGCGCY 1 cut(s) 368
BfuI GTATCC 1 cut(s) 1017
BisI GCNGC 3 cut(s) 765, 1475, 1794
BlsI GCNGC 3 cut(s) 766, 1476, 1795
Bme1390I CCNGG 2 cut(s) 373, 689
Bme18I GGWCC 2 cut(s) 375, 1288
BmeT110I CYCGRG 1 cut(s) 1432
BmgT120I GGNCC 6 cut(s) 174, 175, 375, 1067, 1096, 1288
BmiI GGNNCC 5 cut(s) 175, 176, 376, 1600, 1965
BmrFI CCNGG 2 cut(s) 373, 689
BmrI ACTGGG 1 cut(s) 1029
BmsI GCATC 3 cut(s) 148, 552, 1285
BmtI GCTAGC 1 cut(s) 1647
BmuI ACTGGG 1 cut(s) 1029
BpmI CTGGAG 2 cut(s) 373, 2010
Bpu10I CCTNAGC 1 cut(s) 1271
Bpu14I TTCGAA 1 cut(s) 1053
BpuMI CCSGG 1 cut(s) 373
BsaAI YACGTR 1 cut(s) 1188
BsaJI CCNNGG 5 cut(s) 581, 1431, 1453, 1564, 1602
BsaWI WCCGGW 2 cut(s) 272, 1873
Bsc4I CCNNNNNNNGG 6 cut(s) 396, 475, 582, 587, 881, 1459
Bse118I RCCGGY 2 cut(s) 367, 1960
Bse1I ACTGG 2 cut(s) 592, 1024
Bse3DI GCAATG 2 cut(s) 1472, 1504
BseAI TCCGGA 1 cut(s) 1873
BseBI CCWGG 1 cut(s) 689
BseDI CCNNGG 5 cut(s) 581, 1431, 1453, 1564, 1602
BseGI GGATG 4 cut(s) 1405, 1463, 1870, 2001
BseLI CCNNNNNNNGG 6 cut(s) 396, 475, 582, 587, 881, 1459
BseMI GCAATG 2 cut(s) 1472, 1504
BseMII CTCAG 2 cut(s) 726, 2028
BseNI ACTGG 2 cut(s) 592, 1024
BseRI GAGGAG 1 cut(s) 245
BseSI GKGCMC 2 cut(s) 178, 1968
BseX3I CGGCCG 2 cut(s) 226, 369
BseXI GCAGC 3 cut(s) 776, 1461, 1805
BseYI CCCAGC 1 cut(s) 107
BsgI GTGCAG 1 cut(s) 1460
Bsh1236I CGCG 1 cut(s) 1526
Bsh1285I CGRYCG 3 cut(s) 229, 372, 483
BshNI GGYRCC 1 cut(s) 1963
BsiEI CGRYCG 3 cut(s) 229, 372, 483
BsiHKAI GWGCWC 3 cut(s) 778, 1767, 1870
BsiHKCI CYCGRG 1 cut(s) 1432
BsiSI CCGG 7 cut(s) 273, 321, 368, 372, 1596, 1874, 1961
BslFI GGGAC 1 cut(s) 1075
BslI CCNNNNNNNGG 6 cut(s) 396, 475, 582, 587, 881, 1459
BsmAI GTCTC 1 cut(s) 2004
BsmFI GGGAC 1 cut(s) 1075
BsoBI CYCGRG 1 cut(s) 1432
Bsp119I TTCGAA 1 cut(s) 1053
Bsp120I GGGCCC 1 cut(s) 174
Bsp1286I GDGCHC 5 cut(s) 178, 778, 1767, 1870, 1968
Bsp13I TCCGGA 1 cut(s) 1873
Bsp143I GATC 5 cut(s) 693, 718, 795, 859, 1714
Bsp19I CCATGG 3 cut(s) 581, 1564, 1602
BspACI CCGC 5 cut(s) 129, 181, 259, 479, 1812
BspCNI CTCAG 2 cut(s) 725, 2027
BspEI TCCGGA 1 cut(s) 1873
BspFNI CGCG 1 cut(s) 1526
BspHI TCATGA 1 cut(s) 1030
BspLI GGNNCC 5 cut(s) 175, 176, 376, 1600, 1965
BspMAI CTGCAG 1 cut(s) 977
BspOI GCTAGC 1 cut(s) 1647
BspPI GGATC 1 cut(s) 854
BspT104I TTCGAA 1 cut(s) 1053
BspT107I GGYRCC 1 cut(s) 1963
BsrDI GCAATG 2 cut(s) 1472, 1504
BsrFI RCCGGY 2 cut(s) 367, 1960
BsrI ACTGG 2 cut(s) 592, 1024
BssAI RCCGGY 2 cut(s) 367, 1960
BssECI CCNNGG 5 cut(s) 581, 1431, 1453, 1564, 1602
BssMI GATC 5 cut(s) 693, 718, 795, 859, 1714
BssT1I CCWWGG 4 cut(s) 581, 1453, 1564, 1602
Bst2UI CCWGG 1 cut(s) 689
Bst4CI ACNGT 5 cut(s) 69, 199, 341, 625, 1981
Bst6I CTCTTC 1 cut(s) 974
BstAPI GCANNNNNTGC 2 cut(s) 773, 1471
BstBAI YACGTR 1 cut(s) 1188
BstBI TTCGAA 1 cut(s) 1053
BstC8I GCNNGC 4 cut(s) 351, 369, 1645, 2022
BstDEI CTNAG 4 cut(s) 653, 712, 1271, 2014
BstDSI CCRYGG 3 cut(s) 581, 1564, 1602
BstF5I GGATG 4 cut(s) 1405, 1463, 1870, 2001
BstFNI CGCG 1 cut(s) 1526
BstH2I RGCGCY 1 cut(s) 368
BstHHI GCGC 2 cut(s) 367, 2020
BstKTI GATC 5 cut(s) 696, 721, 798, 862, 1717
BstMAI GTCTC 1 cut(s) 2004
BstMBI GATC 5 cut(s) 693, 718, 795, 859, 1714
BstMCI CGRYCG 3 cut(s) 229, 372, 483
BstMWI GCNNNNNNNGC 3 cut(s) 773, 782, 1471
BstNI CCWGG 1 cut(s) 689
BstSCI CCNGG 2 cut(s) 371, 687
BstSFI CTRYAG 3 cut(s) 973, 1663, 1990
BstSLI GKGCMC 2 cut(s) 178, 1968
BstUI CGCG 1 cut(s) 1526
BstV1I GCAGC 3 cut(s) 776, 1461, 1805
BstZI CGGCCG 2 cut(s) 226, 369
BsuI GTATCC 1 cut(s) 1017
BtgI CCRYGG 3 cut(s) 581, 1564, 1602
BtsCI GGATG 4 cut(s) 1405, 1463, 1870, 2001
BtsIMutI CAGTG 1 cut(s) 380
Cac8I GCNNGC 4 cut(s) 351, 369, 1645, 2022
CciI TCATGA 1 cut(s) 1030
CfoI GCGC 2 cut(s) 367, 2020
Cfr10I RCCGGY 2 cut(s) 367, 1960
Cfr13I GGNCC 6 cut(s) 174, 175, 375, 1067, 1096, 1288
CseI GACGC 1 cut(s) 211
Csp6I GTAC 2 cut(s) 195, 214
CspCI CAANNNNNGTGG 2 cut(s) 1572, 1607
CviAII CATG 8 cut(s) 451, 536, 582, 1031, 1421, 1565, 1603, 1612
CviQI GTAC 2 cut(s) 195, 214
DdeI CTNAG 4 cut(s) 653, 712, 1271, 2014
DpnI GATC 5 cut(s) 695, 720, 797, 861, 1716
DpnII GATC 5 cut(s) 693, 718, 795, 859, 1714
EaeI YGGCCR 3 cut(s) 226, 369, 1593
EagI CGGCCG 2 cut(s) 226, 369
Eam1104I CTCTTC 1 cut(s) 974
EarI CTCTTC 1 cut(s) 974
EciI GGCGGA 2 cut(s) 170, 248
Ecl136II GAGCTC 1 cut(s) 1765
EclXI CGGCCG 2 cut(s) 226, 369
Eco130I CCWWGG 4 cut(s) 581, 1453, 1564, 1602
Eco147I AGGCCT 1 cut(s) 1891
Eco24I GRGCYC 2 cut(s) 178, 1767
Eco32I GATATC 3 cut(s) 493, 1209, 1486
Eco47I GGWCC 2 cut(s) 375, 1288
Eco52I CGGCCG 2 cut(s) 226, 369
Eco53kI GAGCTC 1 cut(s) 1765
Eco57I CTGAAG 2 cut(s) 1065, 1253
Eco88I CYCGRG 1 cut(s) 1432
EcoICRI GAGCTC 1 cut(s) 1765
EcoO109I RGGNCCY 3 cut(s) 174, 175, 375
EcoRI GAATTC 1 cut(s) 1049
EcoRII CCWGG 1 cut(s) 687
EcoRV GATATC 3 cut(s) 493, 1209, 1486
EcoT14I CCWWGG 4 cut(s) 581, 1453, 1564, 1602
EcoT38I GRGCYC 2 cut(s) 178, 1767
ErhI CCWWGG 4 cut(s) 581, 1453, 1564, 1602
FaeI CATG 8 cut(s) 454, 539, 585, 1034, 1424, 1568, 1606, 1615
FaqI GGGAC 1 cut(s) 1075
FatI CATG 8 cut(s) 450, 535, 581, 1030, 1420, 1564, 1602, 1611
FauI CCCGC 1 cut(s) 1805
FbaI TGATCA 2 cut(s) 693, 1714
FblI GTMKAC 4 cut(s) 201, 1332, 1560, 1989
Fnu4HI GCNGC 3 cut(s) 765, 1475, 1794
FokI GGATG 4 cut(s) 1412, 1470, 1857, 2008
FriOI GRGCYC 2 cut(s) 178, 1767
Fsp4HI GCNGC 3 cut(s) 765, 1475, 1794
FspBI CTAG 4 cut(s) 902, 1107, 1644, 1887
GlaI GCGC 2 cut(s) 366, 2019
GluI GCNGC 3 cut(s) 765, 1475, 1794
GsaI CCCAGC 1 cut(s) 111
GsuI CTGGAG 2 cut(s) 373, 2010
HaeII RGCGCY 1 cut(s) 368
HapII CCGG 7 cut(s) 273, 321, 368, 372, 1596, 1874, 1961
HgaI GACGC 1 cut(s) 211
HhaI GCGC 2 cut(s) 367, 2020
Hin1II CATG 8 cut(s) 454, 539, 585, 1034, 1424, 1568, 1606, 1615
Hin6I GCGC 2 cut(s) 365, 2018
HinP1I GCGC 2 cut(s) 365, 2018
HincII GTYRAC 3 cut(s) 202, 427, 1392
HindII GTYRAC 3 cut(s) 202, 427, 1392
HindIII AAGCTT 1 cut(s) 1130
HinfI GANTC 5 cut(s) 317, 815, 1282, 1361, 1511
HpaI GTTAAC 1 cut(s) 1392
HpaII CCGG 7 cut(s) 273, 321, 368, 372, 1596, 1874, 1961
HphI GGTGA 4 cut(s) 178, 233, 353, 703
Hpy166II GTNNAC 8 cut(s) 202, 427, 456, 1159, 1333, 1392, 1561, 1990
Hpy188I TCNGA 4 cut(s) 23, 780, 859, 1281
Hpy188III TCNNGA 6 cut(s) 390, 882, 1031, 1434, 1874, 2027
Hpy8I GTNNAC 8 cut(s) 202, 427, 456, 1159, 1333, 1392, 1561, 1990
Hpy99I CGWCG 2 cut(s) 203, 227
HpyCH4III ACNGT 5 cut(s) 69, 199, 341, 625, 1981
HpyCH4IV ACGT 2 cut(s) 671, 1187
HpyCH4V TGCA 5 cut(s) 83, 975, 1103, 1418, 1477
HpyF10VI GCNNNNNNNGC 3 cut(s) 773, 782, 1471
HpyF3I CTNAG 4 cut(s) 653, 712, 1271, 2014
HpySE526I ACGT 2 cut(s) 671, 1187
Hsp92II CATG 8 cut(s) 454, 539, 585, 1034, 1424, 1568, 1606, 1615
HspAI GCGC 2 cut(s) 365, 2018
Kpn2I TCCGGA 1 cut(s) 1873
KroI GCCGGC 1 cut(s) 367
KroNI GCCGGC 1 cut(s) 369
Ksp22I TGATCA 2 cut(s) 693, 1714
KspAI GTTAAC 1 cut(s) 1392
Kzo9I GATC 5 cut(s) 693, 718, 795, 859, 1714
LmnI GCTCC 8 cut(s) 729, 807, 926, 1244, 1462, 1762, 2029, 2042
Lsp1109I GCAGC 3 cut(s) 776, 1461, 1805
LweI GCATC 3 cut(s) 148, 552, 1285
MaeI CTAG 4 cut(s) 902, 1107, 1644, 1887
MaeII ACGT 2 cut(s) 671, 1187
MaeIII GTNAC 4 cut(s) 124, 571, 625, 1627
MalI GATC 5 cut(s) 695, 720, 797, 861, 1716
MboI GATC 5 cut(s) 693, 718, 795, 859, 1714
MboII GAAGA 9 cut(s) 44, 47, 349, 487, 961, 991, 1058, 1216, 1739
MfeI CAATTG 3 cut(s) 44, 1587, 1710
MhlI GDGCHC 5 cut(s) 178, 778, 1767, 1870, 1968
MlyI GAGTC 1 cut(s) 311
MmeI TCCRAC 1 cut(s) 1315
MroI TCCGGA 1 cut(s) 1873
MroNI GCCGGC 1 cut(s) 367
MseI TTAA 5 cut(s) 62, 1200, 1391, 1521, 1920
MslI CAYNNNNRTG 2 cut(s) 536, 1722
MspA1I CMGCKG 1 cut(s) 995
MspI CCGG 7 cut(s) 273, 321, 368, 372, 1596, 1874, 1961
MspR9I CCNGG 2 cut(s) 373, 689
MunI CAATTG 3 cut(s) 44, 1587, 1710
MvaI CCWGG 1 cut(s) 689
MvnI CGCG 1 cut(s) 1526
MwoI GCNNNNNNNGC 3 cut(s) 773, 782, 1471
NaeI GCCGGC 1 cut(s) 369
NciI CCSGG 1 cut(s) 373
NcoI CCATGG 3 cut(s) 581, 1564, 1602
NdeII GATC 5 cut(s) 693, 718, 795, 859, 1714
NgoMIV GCCGGC 1 cut(s) 367
NheI GCTAGC 1 cut(s) 1643
NlaIII CATG 8 cut(s) 454, 539, 585, 1034, 1424, 1568, 1606, 1615
NlaIV GGNNCC 5 cut(s) 175, 176, 376, 1600, 1965
NmeAIII GCCGAG 2 cut(s) 254, 740
NspV TTCGAA 1 cut(s) 1053
OliI CACNNNNGTG 1 cut(s) 536
PagI TCATGA 1 cut(s) 1030
PceI AGGCCT 1 cut(s) 1891
PdiI GCCGGC 1 cut(s) 369
PfeI GAWTC 4 cut(s) 815, 1282, 1361, 1511
PflMI CCANNNNNTGG 1 cut(s) 587
PkrI GCNGC 3 cut(s) 766, 1476, 1795
PleI GAGTC 1 cut(s) 311
PpsI GAGTC 1 cut(s) 311
Ppu21I YACGTR 1 cut(s) 1188
PpuMI RGGWCCY 1 cut(s) 375
Psp124BI GAGCTC 1 cut(s) 1767
Psp5II RGGWCCY 1 cut(s) 375
Psp6I CCWGG 1 cut(s) 687
PspFI CCCAGC 1 cut(s) 107
PspGI CCWGG 1 cut(s) 687
PspN4I GGNNCC 5 cut(s) 175, 176, 376, 1600, 1965
PspOMI GGGCCC 1 cut(s) 174
PspPI GGNCC 6 cut(s) 174, 175, 375, 1067, 1096, 1288
PspPPI RGGWCCY 1 cut(s) 375
PstI CTGCAG 1 cut(s) 977
PvuII CAGCTG 1 cut(s) 995
RsaI GTAC 2 cut(s) 196, 215
RsaNI GTAC 2 cut(s) 195, 214
RseI CAYNNNNRTG 2 cut(s) 536, 1722
SacI GAGCTC 1 cut(s) 1767
SalI GTCGAC 1 cut(s) 200
SaqAI TTAA 5 cut(s) 62, 1200, 1391, 1521, 1920
SatI GCNGC 3 cut(s) 765, 1475, 1794
Sau3AI GATC 5 cut(s) 693, 718, 795, 859, 1714
Sau96I GGNCC 6 cut(s) 174, 175, 375, 1067, 1096, 1288
SchI GAGTC 1 cut(s) 311
ScrFI CCNGG 2 cut(s) 373, 689
SduI GDGCHC 5 cut(s) 178, 778, 1767, 1870, 1968
SfaNI GCATC 3 cut(s) 148, 552, 1285
SfcI CTRYAG 3 cut(s) 973, 1663, 1990
SfuI TTCGAA 1 cut(s) 1053
SinI GGWCC 2 cut(s) 375, 1288
SmiMI CAYNNNNRTG 2 cut(s) 536, 1722
SpeI ACTAGT 2 cut(s) 901, 1106
SseBI AGGCCT 1 cut(s) 1891
SsiI CCGC 5 cut(s) 129, 181, 259, 479, 1812
SspI AATATT 1 cut(s) 505
SspMI CTAG 4 cut(s) 902, 1107, 1644, 1887
SstI GAGCTC 1 cut(s) 1767
StuI AGGCCT 1 cut(s) 1891
StyD4I CCNGG 2 cut(s) 371, 687
StyI CCWWGG 4 cut(s) 581, 1453, 1564, 1602
TaaI ACNGT 5 cut(s) 69, 199, 341, 625, 1981
TaiI ACGT 2 cut(s) 674, 1190
TaqI TCGA 9 cut(s) 168, 201, 483, 546, 644, 1053, 1577, 1749, 1983
TfiI GAWTC 4 cut(s) 815, 1282, 1361, 1511
Tru1I TTAA 5 cut(s) 62, 1200, 1391, 1521, 1920
Tru9I TTAA 5 cut(s) 62, 1200, 1391, 1521, 1920
TscAI CASTG 1 cut(s) 387
TseI GCWGC 3 cut(s) 764, 1474, 1793
TspGWI ACGGA 2 cut(s) 547, 1634
TspRI CASTG 1 cut(s) 387
Van91I CCANNNNNTGG 1 cut(s) 587
VpaK11BI GGWCC 2 cut(s) 375, 1288
XapI RAATTY 5 cut(s) 700, 1049, 1337, 1817, 1929
XcmI CCANNNNNNNNNTGG 2 cut(s) 1354, 1609
XmiI GTMKAC 4 cut(s) 201, 1332, 1560, 1989
XspI CTAG 4 cut(s) 902, 1107, 1644, 1887
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.