RchiOBHm_Chr5g0059491

L-type lectin-domain containing receptor kinase IX.1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000038
Physical Location & Seq
Forward (+)
64433908 .. 64435017
1110 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ33609

Sequence Viewer

Length: 1110 bp
ATGGGGACAGAAGATTTGAAGGGGATTAAGGTGGCTGCACTACCTTCTTTATTTGATTTTATTCTTGGAGTTGGTGTATCCATATATTGTTTGGTGGCAAGCAAGCGAAGGAAGAGCAGTGGCGTAATCGGTAATAATGACCTTGACAGACAAGCCTTACCAAAGCAGTTTAGTCCCGAAGAATTGCATGCTGCCACCAATGGCTTCGCACCACATAGAAGACTAGTCCGAGAAGGGTCTGGACAAGTTTATAGAGGACTGCTACAAGGTCTAGGCCGTGAAGTAGCTATCAAGAAAATCTGGACAGGAACTGATCAACACTATGAGGAAACTTTTATGAATGAAGTCAAAATAATAAGCCGCTTAATCCATCGAAATATGGTGCAATTCATTGGATGGTGTCATGATCAAGAGCGCAACGAGTGCTTGGTTGTTTATGAATACATGCCAAATGGCAGCCTTGACCAGCATCTATTTGGCCGTAGAAACAGCCTGCAATGGAATTCAAGGTACAAGGTAGCTTTAGGCTTGGCCAGAGCCCTTCAATACCTACATGAAGATGCAGAGGATTGTGTCTTTCACAGGGACATCAAGTCGGCTGACGTGTTGTTGGACAAGGATTTAAGAACTAAACTTGGTGATTTTGGGATTTCTAAGCGAATGGATTCCCAGTTCCCAACTCAGACAACAGAAGTTGTTGGTTCCCAACTCAGACAACGTACAGAAGTTGTTGGGACTGTGGATTACATAGCCACCGAATATGCTATTGAAGGGAAGGCTAGTAAAGAATCTGACATGTCTAGTTTTAAAGTTGTGGCCTTAGAAATTGCTTGTGGAAGGAAGAGTTACAGTTTCAATGACAACTTGTCACTTTATAAGTGGGTTTGGAAATTGTACCTTGAAGGGCATCTTCTCGATGCAGCTGATGAAAGATTGGAAACGGAATTTGAACAAGAAGAAATGAAATGCTTGTTAATTGTGGGATTATGGTGTACGCATCCCCATAATAAGGAAAGACCAAACGCAGGACAAGTGATGAAAGTACTTGAGCTTGAAGAACCATTGCCCGCACTGCCACTAGACATGCATCTTCAACAGTCCCTGCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase

Protein Analysis

369

Amino Acids

42.04

Weight (kDa)

6.09

Isoelectric Point (pI)

51.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 80 - 295 2.1e-35 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 80 - 347 6.6e-35 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 876
AciI CCGC 2 cut(s) 361, 1068
AcoI YGGCCR 2 cut(s) 478, 531
AcsI RAATTY 2 cut(s) 502, 944
AfaI GTAC 5 cut(s) 512, 721, 896, 994, 1044
AfiI CCNNNNNNNGG 2 cut(s) 1009, 1025
AflIII ACRYGT 2 cut(s) 603, 795
AgsI TTSAA 9 cut(s) 19, 507, 545, 770, 856, 902, 950, 1055, 1094
AhdI GACNNNNNGTC 2 cut(s) 592, 865
AhlI ACTAGT 1 cut(s) 223
AjiI CACGTC 1 cut(s) 604
AloI GAACNNNNNNTCC 2 cut(s) 656, 688
AluBI AGCT 4 cut(s) 287, 521, 923, 1051
AluI AGCT 4 cut(s) 287, 521, 923, 1051
AlwNI CAGNNNCTG 2 cut(s) 311, 1102
AoxI GGCC 4 cut(s) 274, 478, 531, 816
ApeKI GCWGC 4 cut(s) 35, 191, 456, 920
ApoI RAATTY 2 cut(s) 502, 944
ArsI GACNNNNNNTTYG 1 cut(s) 30
Asp700I GAANNNNTTC 1 cut(s) 664
AspLEI GCGC 1 cut(s) 417
AsuHPI GGTGA 1 cut(s) 650
BalI TGGCCA 1 cut(s) 533
BanII GRGCYC 1 cut(s) 541
BbsI GAAGAC 1 cut(s) 226
BbvI GCAGC 4 cut(s) 22, 178, 468, 932
BccI CCATC 2 cut(s) 378, 390
BceAI ACGGC 2 cut(s) 261, 465
BciVI GTATCC 1 cut(s) 88
BclI TGATCA 2 cut(s) 313, 406
BcuI ACTAGT 1 cut(s) 223
BfaI CTAG 5 cut(s) 224, 272, 780, 801, 1079
BfuI GTATCC 1 cut(s) 88
BisI GCNGC 5 cut(s) 36, 192, 361, 457, 921
BlsI GCNGC 5 cut(s) 37, 193, 362, 458, 922
BmcAI AGTACT 1 cut(s) 1044
BmeRI GACNNNNNGTC 2 cut(s) 592, 865
BmgBI CACGTC 1 cut(s) 604
BmiI GGNNCC 1 cut(s) 703
BmrI ACTGGG 1 cut(s) 664
BmsI GCATC 6 cut(s) 478, 550, 907, 916, 1006, 1096
BmuI ACTGGG 1 cut(s) 664
BpiI GAAGAC 1 cut(s) 226
BpuEI CTTGAG 1 cut(s) 1067
BsaXI ACNNNNNCTCC 2 cut(s) 60, 90
Bsc4I CCNNNNNNNGG 2 cut(s) 1009, 1025
Bse1I ACTGG 1 cut(s) 670
Bse3DI GCAATG 2 cut(s) 503, 1061
BseGI GGATG 2 cut(s) 401, 997
BseLI CCNNNNNNNGG 2 cut(s) 1009, 1025
BseMI GCAATG 2 cut(s) 503, 1061
BseMII CTCAG 2 cut(s) 695, 724
BseNI ACTGG 1 cut(s) 670
BseXI GCAGC 4 cut(s) 22, 178, 468, 932
BsgI GTGCAG 1 cut(s) 21
BshFI GGCC 4 cut(s) 276, 480, 533, 818
BslFI GGGAC 5 cut(s) 19, 159, 599, 748, 1084
BslI CCNNNNNNNGG 2 cut(s) 1009, 1025
BsmFI GGGAC 5 cut(s) 19, 159, 599, 748, 1084
BsnI GGCC 4 cut(s) 276, 480, 533, 818
Bsp1286I GDGCHC 1 cut(s) 541
Bsp143I GATC 2 cut(s) 313, 406
BspACI CCGC 2 cut(s) 361, 1068
BspANI GGCC 4 cut(s) 276, 480, 533, 818
BspCNI CTCAG 2 cut(s) 694, 723
BspHI TCATGA 1 cut(s) 403
BspLI GGNNCC 1 cut(s) 703
BspQI GCTCTTC 1 cut(s) 107
BsrDI GCAATG 2 cut(s) 503, 1061
BsrI ACTGG 1 cut(s) 670
BssMI GATC 2 cut(s) 313, 406
Bst4CI ACNGT 3 cut(s) 739, 851, 1098
Bst6I CTCTTC 2 cut(s) 107, 836
BstAPI GCANNNNNTGC 1 cut(s) 423
BstC8I GCNNGC 5 cut(s) 100, 104, 189, 494, 1068
BstDEI CTNAG 4 cut(s) 654, 681, 710, 820
BstF5I GGATG 2 cut(s) 401, 997
BstHHI GCGC 1 cut(s) 417
BstKTI GATC 2 cut(s) 316, 409
BstMBI GATC 2 cut(s) 313, 406
BstMWI GCNNNNNNNGC 2 cut(s) 423, 1072
BstNSI RCATGY 4 cut(s) 191, 448, 799, 1087
BstV1I GCAGC 4 cut(s) 22, 178, 468, 932
BstV2I GAAGAC 1 cut(s) 226
BsuI GTATCC 1 cut(s) 88
BsuRI GGCC 4 cut(s) 276, 480, 533, 818
BtrI CACGTC 1 cut(s) 604
BtsCI GGATG 2 cut(s) 401, 997
BtsI GCAGTG 2 cut(s) 124, 1070
BtsIMutI CAGTG 2 cut(s) 124, 1070
Cac8I GCNNGC 5 cut(s) 100, 104, 189, 494, 1068
CaiI CAGNNNCTG 2 cut(s) 311, 1102
CciI TCATGA 1 cut(s) 403
CfoI GCGC 1 cut(s) 417
Csp6I GTAC 5 cut(s) 511, 720, 895, 993, 1043
CviAII CATG 6 cut(s) 188, 404, 445, 554, 796, 1084
CviQI GTAC 5 cut(s) 511, 720, 895, 993, 1043
DdeI CTNAG 4 cut(s) 654, 681, 710, 820
DpnI GATC 2 cut(s) 315, 408
DpnII GATC 2 cut(s) 313, 406
DraI TTTAAA 1 cut(s) 808
DriI GACNNNNNGTC 2 cut(s) 592, 865
EaeI YGGCCR 2 cut(s) 478, 531
Eam1104I CTCTTC 2 cut(s) 107, 836
Eam1105I GACNNNNNGTC 2 cut(s) 592, 865
EarI CTCTTC 2 cut(s) 107, 836
Eco24I GRGCYC 1 cut(s) 541
EcoRI GAATTC 1 cut(s) 502
EcoT22I ATGCAT 1 cut(s) 1089
EcoT38I GRGCYC 1 cut(s) 541
FaeI CATG 6 cut(s) 191, 407, 448, 557, 799, 1087
FalI AAGNNNNNCTT 2 cut(s) 894, 926
FaqI GGGAC 5 cut(s) 19, 159, 599, 748, 1084
FatI CATG 6 cut(s) 187, 403, 444, 553, 795, 1083
FauI CCCGC 1 cut(s) 1075
FbaI TGATCA 2 cut(s) 313, 406
Fnu4HI GCNGC 5 cut(s) 36, 192, 361, 457, 921
FokI GGATG 2 cut(s) 408, 984
FriOI GRGCYC 1 cut(s) 541
Fsp4HI GCNGC 5 cut(s) 36, 192, 361, 457, 921
FspBI CTAG 5 cut(s) 224, 272, 780, 801, 1079
GlaI GCGC 1 cut(s) 416
GluI GCNGC 5 cut(s) 36, 192, 361, 457, 921
HaeIII GGCC 4 cut(s) 276, 480, 533, 818
HhaI GCGC 1 cut(s) 417
Hin1II CATG 6 cut(s) 191, 407, 448, 557, 799, 1087
Hin6I GCGC 1 cut(s) 415
HinP1I GCGC 1 cut(s) 415
HinfI GANTC 2 cut(s) 665, 788
HphI GGTGA 1 cut(s) 650
Hpy166II GTNNAC 1 cut(s) 993
Hpy188I TCNGA 4 cut(s) 230, 684, 713, 793
Hpy188III TCNNGA 7 cut(s) 176, 240, 292, 301, 404, 410, 914
Hpy8I GTNNAC 1 cut(s) 993
HpyAV CCTTC 9 cut(s) 13, 54, 102, 227, 551, 764, 769, 831, 896
HpyCH4III ACNGT 3 cut(s) 739, 851, 1098
HpyCH4IV ACGT 2 cut(s) 603, 718
HpyCH4V TGCA 7 cut(s) 38, 187, 385, 496, 563, 920, 1087
HpyF10VI GCNNNNNNNGC 2 cut(s) 423, 1072
HpyF3I CTNAG 4 cut(s) 654, 681, 710, 820
HpySE526I ACGT 2 cut(s) 603, 718
Hsp92II CATG 6 cut(s) 191, 407, 448, 557, 799, 1087
HspAI GCGC 1 cut(s) 415
Ksp22I TGATCA 2 cut(s) 313, 406
Kzo9I GATC 2 cut(s) 313, 406
LguI GCTCTTC 1 cut(s) 107
LpnPI CCDG 9 cut(s) 225, 286, 291, 479, 506, 547, 568, 683, 1011
Lsp1109I GCAGC 4 cut(s) 22, 178, 468, 932
LweI GCATC 6 cut(s) 478, 550, 907, 916, 1006, 1096
MaeI CTAG 5 cut(s) 224, 272, 780, 801, 1079
MaeII ACGT 2 cut(s) 603, 718
MaeIII GTNAC 2 cut(s) 845, 867
MalI GATC 2 cut(s) 315, 408
MboI GATC 2 cut(s) 313, 406
MhlI GDGCHC 1 cut(s) 541
MlsI TGGCCA 1 cut(s) 533
MluCI AATT 7 cut(s) 182, 386, 502, 825, 890, 944, 975
MluNI TGGCCA 1 cut(s) 533
MmeI TCCRAC 1 cut(s) 591
MnlI CCTC 3 cut(s) 248, 319, 559
Mox20I TGGCCA 1 cut(s) 533
Mph1103I ATGCAT 1 cut(s) 1089
MroXI GAANNNNTTC 1 cut(s) 664
MscI TGGCCA 1 cut(s) 533
MseI TTAA 6 cut(s) 27, 365, 623, 807, 974, 1108
MslI CAYNNNNRTG 1 cut(s) 558
Msp20I TGGCCA 1 cut(s) 533
MspA1I CMGCKG 1 cut(s) 923
MwoI GCNNNNNNNGC 2 cut(s) 423, 1072
NdeII GATC 2 cut(s) 313, 406
NlaIII CATG 6 cut(s) 191, 407, 448, 557, 799, 1087
NlaIV GGNNCC 1 cut(s) 703
NmuCI GTSAC 1 cut(s) 867
NsiI ATGCAT 1 cut(s) 1089
NspI RCATGY 4 cut(s) 191, 448, 799, 1087
PaeI GCATGC 1 cut(s) 191
PagI TCATGA 1 cut(s) 403
PciI ACATGT 1 cut(s) 795
PciSI GCTCTTC 1 cut(s) 107
PdmI GAANNNNTTC 1 cut(s) 664
PfeI GAWTC 2 cut(s) 665, 788
PkrI GCNGC 5 cut(s) 37, 193, 362, 458, 922
PscI ACATGT 1 cut(s) 795
PsiI TTATAA 1 cut(s) 876
PspN4I GGNNCC 1 cut(s) 703
PstNI CAGNNNCTG 2 cut(s) 311, 1102
PvuII CAGCTG 1 cut(s) 923
RsaI GTAC 5 cut(s) 512, 721, 896, 994, 1044
RsaNI GTAC 5 cut(s) 511, 720, 895, 993, 1043
RseI CAYNNNNRTG 1 cut(s) 558
SapI GCTCTTC 1 cut(s) 107
SaqAI TTAA 6 cut(s) 27, 365, 623, 807, 974, 1108
SatI GCNGC 5 cut(s) 36, 192, 361, 457, 921
Sau3AI GATC 2 cut(s) 313, 406
ScaI AGTACT 1 cut(s) 1044
SduI GDGCHC 1 cut(s) 541
SfaNI GCATC 6 cut(s) 478, 550, 907, 916, 1006, 1096
SmiMI CAYNNNNRTG 1 cut(s) 558
SmlI CTYRAG 1 cut(s) 1046
SmoI CTYRAG 1 cut(s) 1046
SpeI ACTAGT 1 cut(s) 223
SphI GCATGC 1 cut(s) 191
Sse9I AATT 7 cut(s) 182, 386, 502, 825, 890, 944, 975
SsiI CCGC 2 cut(s) 361, 1068
SspMI CTAG 5 cut(s) 224, 272, 780, 801, 1079
TaaI ACNGT 3 cut(s) 739, 851, 1098
TaiI ACGT 2 cut(s) 606, 721
TaqI TCGA 2 cut(s) 373, 915
TasI AATT 7 cut(s) 182, 386, 502, 825, 890, 944, 975
TatI WGTACW 1 cut(s) 1042
TauI GCSGC 1 cut(s) 363
TfiI GAWTC 2 cut(s) 665, 788
Tru1I TTAA 6 cut(s) 27, 365, 623, 807, 974, 1108
Tru9I TTAA 6 cut(s) 27, 365, 623, 807, 974, 1108
TscAI CASTG 2 cut(s) 124, 1077
TseFI GTSAC 1 cut(s) 867
TseI GCWGC 4 cut(s) 35, 191, 456, 920
Tsp45I GTSAC 1 cut(s) 867
TspDTI ATGAA 8 cut(s) 353, 357, 379, 453, 570, 942, 977, 1052
TspGWI ACGGA 1 cut(s) 956
TspRI CASTG 2 cut(s) 124, 1077
XapI RAATTY 2 cut(s) 502, 944
XceI RCATGY 4 cut(s) 191, 448, 799, 1087
XcmI CCANNNNNNNNNTGG 2 cut(s) 88, 473
XmnI GAANNNNTTC 1 cut(s) 664
XspI CTAG 5 cut(s) 224, 272, 780, 801, 1079
ZrmI AGTACT 1 cut(s) 1044
Zsp2I ATGCAT 1 cut(s) 1089
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.