FvH4_3g23100

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
16185700 .. 16188058
2359 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g23100.t1

Sequence Viewer

Length: 2097 bp
ATGGTTGTCATTCACAACTGTGGGAATGTTATCATGATACAGTTTCATGAGTACTACTCACCAAAGCAGCGCCTTCAATTCCTTCTTCTTCTCTTCTTTCTGCTAACCCCTTCTGCAACCTCATTAACCTTCAATTTCTCCAGCTTCTCCAATGCAAACAATATAAGAACCGAGAATCATGCTAATCTCGACAAGCAAGTCCTCCGACTCACCAACAGTGCTGTAGATGAATTACAGGTGGAGAGCGTCGGTCGAGCCACTTACGACGAACCCTTCCTCCTCCAGGACGCCACCGGAAAGCTCGCTGATTTTACTACACATTTCACCTTTGTCATCGATTCACTACGTGAAACCGCCTACGCAGACGGGCTAGTGTTCTTCATCGCGCCAAACGGATCCGTACTTAACACAACCCTAGGAAGAGGAGGTGCCCTCGGCCTGCCGGTGGAAAACCCTATAGATGGCCCTTCAAGAAATATTGGGTACAACTTTGTGGCGGTGGAGTTTGATATCTTCAAGAATAGTCTGACATCGGTTGACGATCCCACCGGAAATCATGCCGGTATCGATGTCAACTCTCTCAAGTCCTTGAACACCAAACCTTGGAATGGTAATATTACGTATGGAAGAAACAACAGCGCTACGGTCAGTTACGATTCCAGCACAAAAAATCTTAGCGTTGCCTTCACCACATTTGTTAATGGTGCCCAACAGATGGACTATCTTTCTCACCAAGTTGATCTGAAAGAGTACTTGCCCAACTTGGTCATTGCCGGGTTCTCTGCTGCGACCGGTGCTAACATTGCTGTGCACAAGATTCTCTCATGGAATTTTTCTTCTACTGACCTGGCTATTGCTAAGCCAGGAAATGGGGTGAGTACAGGACTAGTCGTTGGTTTGAGTGTTGGTGGATTCATTGTCTTGGTTGGTGTGTTGTCACTGGTTTGGTTCATCTTTTGGAAGAAAAGAAAAGGAGGGGAAAGTGATGATGAAGATCCCATGGGACTTAATGACTCTATCGATGACGAATTTGAGAAGGGGACAGGCCCTAGGAAGTTTTCGTATAGCGAGTTGGCTCGAGCAACAAATAATTTTGTAGAGGGAGAAAAGCTTGGAGAGGGAGGATTTGGAGGGGTTTATAGAGGCTTCATAAAAGACTTGAATTCATATGTTGCTGTTAAGAGGGTATCCAAGGGATCTAAGCAAGGACTTAAGGAGTATGCATCAGAAGTAAGGATCATCAGTCGGCTTAGGCATCGGAATCTGGTGCAACTTATTGGTTGGTGCCATGAAAAGGGTGAGCTCCTGCTTGTGTATGAGTACATGCCCAACGGGAGTTTGGATTCCCATATATTCAAATTGAAAAGCTTGTTGAATTGGAGAGTAAGATACAAGGTTGCTCAAGGGTTGGCCTCCGGATTATTTTACCTACACGAAGAATGGGAACAATGTGTTTTGCATAGGGATATCAAATCCAGCAACATCATGTTGGATTCAAATTTCAACGTCAAGCTTGGGGATTTCGGGCTAGCTCGACTTGTGGACCATGGAAAGCAGTCGGAAACAACAATTGTAGCTGGAACCAGAGGCTACATGGCTCTGGAATATGTTACCACAGGAAAAGCTAGCAAGGAATCGGATGTCTACAGCTTCGGAGTTGTTGCTTTGGAAATAGCCTGCGGAAGAAAATCTATTGATCTCAAGTTACCAAGTACTCAAATAAACATGGTGCAGTGGGTTTGGGAGCTTTATGGAGAAGGGAAAGTGATCGAAGCCGCCGATCCTGTACTTTCAGGAGATTTCGATGCGAAACAAATGGAGTGCTTGATGATTGTTGGGTTATGGTGTGCTCATCCGGACTACCGTATGAGACCTTCAATACAACAAGCAATTCAAGTGCTTAACTTCGAAGTTCCATTGCCTAGTCTACCACCACAGATGCCGATGGCCACCTTTCCTCTTTCAATATCTTTATCCATGTCGTCTGGTTATACCACCAGCTCTGTAGAAGGGAGAACTGATCAGTCTTCAGGCAACGGCTATACGACTAATTCCTCACAGTTCACAACATCTTCTGCAACAGCATCGCTTCTGTAA

Protein Analysis

699

Amino Acids

76.79

Weight (kDa)

5.84

Isoelectric Point (pI)

30.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 42 - 284 4.5e-59 Legume lectin domain
Pkinase PF00069 366 - 632 1.9e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 368 - 564 5.8e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 197
AccB1I GGYRCC 3 cut(s) 428, 704, 1284
AccB7I CCANNNNNTGG 3 cut(s) 603, 715, 869
AccI GTMKAC 2 cut(s) 1644, 1927
AccII CGCG 1 cut(s) 386
AccIII TCCGGA 2 cut(s) 1415, 1855
AciI CCGC 4 cut(s) 354, 497, 1680, 1776
AclWI GGATC 7 cut(s) 390, 403, 536, 989, 1204, 1244, 1775
AcoI YGGCCR 1 cut(s) 1947
AcsI RAATTY 4 cut(s) 829, 1028, 1162, 1498
AcuI CTGAAG 1 cut(s) 2013
AcyI GRCGYC 1 cut(s) 288
AdeI CACNNNGTG 1 cut(s) 347
AfaI GTAC 8 cut(s) 53, 402, 485, 752, 880, 1322, 1714, 1788
AfeI AGCGCT 1 cut(s) 640
AfiI CCNNNNNNNGG 8 cut(s) 283, 445, 461, 603, 608, 715, 869, 1294
AflII CTTAAG 1 cut(s) 1211
AgeI ACCGGT 1 cut(s) 791
AhlI ACTAGT 1 cut(s) 886
AjnI CCWGG 3 cut(s) 282, 846, 862
AleI CACNNNNGTG 1 cut(s) 18
AloI GAACNNNNNNTCC 2 cut(s) 261, 293
Alw21I GWGCWC 3 cut(s) 813, 1305, 1852
Alw26I GTCTC 1 cut(s) 1864
Alw44I GTGCAC 1 cut(s) 809
AlwI GGATC 7 cut(s) 390, 403, 536, 989, 1204, 1244, 1775
Ama87I CYCGRG 1 cut(s) 1077
Aor13HI TCCGGA 2 cut(s) 1415, 1855
Aor51HI AGCGCT 1 cut(s) 640
AoxI GGCC 5 cut(s) 436, 463, 1045, 1410, 1947
ApaLI GTGCAC 1 cut(s) 809
ApeKI GCWGC 2 cut(s) 67, 785
ApoI RAATTY 4 cut(s) 829, 1028, 1162, 1498
AsiGI ACCGGT 1 cut(s) 791
AspA2I CCTAGG 2 cut(s) 415, 1049
AspLEI GCGC 3 cut(s) 72, 388, 641
AspS9I GGNCC 3 cut(s) 464, 1046, 1543
AsuC2I CCSGG 1 cut(s) 775
AsuHPI GGTGA 7 cut(s) 51, 202, 316, 679, 722, 886, 1310
AsuII TTCGAA 1 cut(s) 1908
AsuNHI GCTAGC 2 cut(s) 1528, 1625
AvaI CYCGRG 1 cut(s) 1077
AvaII GGWCC 1 cut(s) 1543
AvrII CCTAGG 2 cut(s) 415, 1049
BaeGI GKGCMC 3 cut(s) 433, 709, 813
BalI TGGCCA 1 cut(s) 1949
BamHI GGATCC 1 cut(s) 395
BanI GGYRCC 3 cut(s) 428, 704, 1284
BanII GRGCYC 1 cut(s) 1305
BarI GAAGNNNNNNTAC 2 cut(s) 1858, 1890
BbsI GAAGAC 1 cut(s) 2019
Bbv12I GWGCWC 3 cut(s) 813, 1305, 1852
BbvI GCAGC 2 cut(s) 79, 772
BccI CCATC 3 cut(s) 455, 709, 1939
BceAI ACGGC 1 cut(s) 2053
BcgI CGANNNNNNTGC 3 cut(s) 161, 195, 2067
BciT130I CCWGG 3 cut(s) 284, 848, 864
BciVI GTATCC 1 cut(s) 1198
BclI TGATCA 1 cut(s) 2020
BcnI CCSGG 1 cut(s) 775
BcoDI GTCTC 1 cut(s) 1864
BcuI ACTAGT 1 cut(s) 886
BfaI CTAG 7 cut(s) 371, 416, 887, 1050, 1529, 1626, 1923
BfmI CTRYAG 4 cut(s) 222, 456, 1645, 2004
BfoI RGCGCY 2 cut(s) 73, 642
BfrI CTTAAG 1 cut(s) 1211
BfuI GTATCC 1 cut(s) 1198
BisI GCNGC 3 cut(s) 68, 786, 1776
BlnI CCTAGG 2 cut(s) 415, 1049
BlpI GCTNAGC 1 cut(s) 858
BlsI GCNGC 3 cut(s) 69, 787, 1777
BmcAI AGTACT 3 cut(s) 53, 752, 1714
Bme1390I CCNGG 4 cut(s) 284, 775, 848, 864
Bme18I GGWCC 1 cut(s) 1543
BmeT110I CYCGRG 1 cut(s) 1077
BmgT120I GGNCC 3 cut(s) 464, 1046, 1543
BmiI GGNNCC 5 cut(s) 397, 430, 706, 1286, 1582
BmrFI CCNGG 4 cut(s) 284, 775, 848, 864
BmsI GCATC 5 cut(s) 1232, 1264, 1795, 1929, 2093
BmtI GCTAGC 2 cut(s) 1532, 1629
BpiI GAAGAC 1 cut(s) 2019
BplI GAGNNNNNCTC 4 cut(s) 41, 73, 417, 449
BpmI CTGGAG 2 cut(s) 124, 266
Bpu10I CCTNAGC 1 cut(s) 1250
Bpu1102I GCTNAGC 1 cut(s) 858
Bpu14I TTCGAA 1 cut(s) 1908
BpuEI CTTGAG 3 cut(s) 566, 1386, 1685
BpuMI CCSGG 1 cut(s) 775
Bsa29I ATCGAT 3 cut(s) 336, 567, 1020
BsaAI YACGTR 2 cut(s) 347, 621
BsaBI GATNNNNATC 1 cut(s) 993
BsaHI GRCGYC 1 cut(s) 288
BsaI GGTCTC 1 cut(s) 1864
BsaJI CCNNGG 7 cut(s) 415, 433, 602, 999, 1049, 1191, 1546
BsaWI WCCGGW 5 cut(s) 293, 548, 791, 1415, 1855
BsaXI ACNNNNNCTCC 2 cut(s) 261, 291
Bsc4I CCNNNNNNNGG 8 cut(s) 283, 445, 461, 603, 608, 715, 869, 1294
Bse118I RCCGGY 3 cut(s) 442, 560, 791
Bse1I ACTGG 1 cut(s) 945
Bse3DI GCAATG 3 cut(s) 768, 801, 1916
Bse8I GATNNNNATC 1 cut(s) 993
BseAI TCCGGA 2 cut(s) 1415, 1855
BseBI CCWGG 3 cut(s) 284, 848, 864
BseCI ATCGAT 3 cut(s) 336, 567, 1020
BseDI CCNNGG 7 cut(s) 415, 433, 602, 999, 1049, 1191, 1546
BseGI GGATG 2 cut(s) 1645, 1852
BseJI GATNNNNATC 1 cut(s) 993
BseLI CCNNNNNNNGG 8 cut(s) 283, 445, 461, 603, 608, 715, 869, 1294
BseMI GCAATG 3 cut(s) 768, 801, 1916
BseNI ACTGG 1 cut(s) 945
BseRI GAGGAG 2 cut(s) 269, 438
BseSI GKGCMC 3 cut(s) 433, 709, 813
BseXI GCAGC 2 cut(s) 79, 772
BsgI GTGCAG 1 cut(s) 1751
Bsh1236I CGCG 1 cut(s) 386
Bsh1285I CGRYCG 2 cut(s) 253, 792
BshFI GGCC 5 cut(s) 438, 465, 1047, 1412, 1949
BshNI GGYRCC 3 cut(s) 428, 704, 1284
BshTI ACCGGT 1 cut(s) 791
BshVI ATCGAT 3 cut(s) 336, 567, 1020
BsiEI CGRYCG 2 cut(s) 253, 792
BsiHKAI GWGCWC 3 cut(s) 813, 1305, 1852
BsiHKCI CYCGRG 1 cut(s) 1077
BsiSI CCGG 8 cut(s) 294, 443, 549, 561, 774, 792, 1416, 1856
BslFI GGGAC 2 cut(s) 1017, 1054
BslI CCNNNNNNNGG 8 cut(s) 283, 445, 461, 603, 608, 715, 869, 1294
BsmAI GTCTC 1 cut(s) 1864
BsmFI GGGAC 2 cut(s) 1017, 1054
BsnI GGCC 5 cut(s) 438, 465, 1047, 1412, 1949
Bso31I GGTCTC 1 cut(s) 1864
BsoBI CYCGRG 1 cut(s) 1077
Bsp119I TTCGAA 1 cut(s) 1908
Bsp1286I GDGCHC 5 cut(s) 433, 709, 813, 1305, 1852
Bsp13I TCCGGA 2 cut(s) 1415, 1855
Bsp1720I GCTNAGC 1 cut(s) 858
Bsp19I CCATGG 2 cut(s) 999, 1546
BspACI CCGC 4 cut(s) 354, 497, 1680, 1776
BspANI GGCC 5 cut(s) 438, 465, 1047, 1412, 1949
BspDI ATCGAT 3 cut(s) 336, 567, 1020
BspEI TCCGGA 2 cut(s) 1415, 1855
BspFNI CGCG 1 cut(s) 386
BspHI TCATGA 2 cut(s) 33, 46
BspLI GGNNCC 5 cut(s) 397, 430, 706, 1286, 1582
BspOI GCTAGC 2 cut(s) 1532, 1629
BspPI GGATC 7 cut(s) 390, 403, 536, 989, 1204, 1244, 1775
BspT104I TTCGAA 1 cut(s) 1908
BspT107I GGYRCC 3 cut(s) 428, 704, 1284
BspTI CTTAAG 1 cut(s) 1211
BspTNI GGTCTC 1 cut(s) 1864
BsrDI GCAATG 3 cut(s) 768, 801, 1916
BsrFI RCCGGY 3 cut(s) 442, 560, 791
BsrI ACTGG 1 cut(s) 945
BssAI RCCGGY 3 cut(s) 442, 560, 791
BssECI CCNNGG 7 cut(s) 415, 433, 602, 999, 1049, 1191, 1546
BssNI GRCGYC 1 cut(s) 288
BssT1I CCWWGG 6 cut(s) 415, 602, 999, 1049, 1191, 1546
Bst2UI CCWGG 3 cut(s) 284, 848, 864
Bst4CI ACNGT 6 cut(s) 20, 42, 218, 646, 1865, 2061
Bst6I CTCTTC 2 cut(s) 98, 415
BstACI GRCGYC 1 cut(s) 288
BstAFI CTTAAG 1 cut(s) 1211
BstBAI YACGTR 2 cut(s) 347, 621
BstBI TTCGAA 1 cut(s) 1908
BstC8I GCNNGC 5 cut(s) 303, 440, 1530, 1627, 1678
BstDEI CTNAG 4 cut(s) 674, 858, 1200, 1250
BstDSI CCRYGG 2 cut(s) 999, 1546
BstENI CCTNNNNNAGG 1 cut(s) 281
BstF5I GGATG 2 cut(s) 1645, 1852
BstFNI CGCG 1 cut(s) 386
BstH2I RGCGCY 2 cut(s) 73, 642
BstHHI GCGC 3 cut(s) 72, 388, 641
BstMAI GTCTC 1 cut(s) 1864
BstMCI CGRYCG 2 cut(s) 253, 792
BstMWI GCNNNNNNNGC 2 cut(s) 794, 803
BstNI CCWGG 3 cut(s) 284, 848, 864
BstNSI RCATGY 1 cut(s) 1327
BstSCI CCNGG 4 cut(s) 282, 773, 846, 862
BstSFI CTRYAG 4 cut(s) 222, 456, 1645, 2004
BstSLI GKGCMC 3 cut(s) 433, 709, 813
BstSNI TACGTA 1 cut(s) 621
BstUI CGCG 1 cut(s) 386
BstV1I GCAGC 2 cut(s) 79, 772
BstV2I GAAGAC 1 cut(s) 2019
BstX2I RGATCY 3 cut(s) 395, 994, 1196
BstYI RGATCY 3 cut(s) 395, 994, 1196
Bsu15I ATCGAT 3 cut(s) 336, 567, 1020
BsuI GTATCC 1 cut(s) 1198
BsuRI GGCC 5 cut(s) 438, 465, 1047, 1412, 1949
BsuTUI ATCGAT 3 cut(s) 336, 567, 1020
BtgI CCRYGG 2 cut(s) 999, 1546
BtgZI GCGATG 2 cut(s) 367, 2070
BtsCI GGATG 2 cut(s) 1645, 1852
BtsI GCAGTG 1 cut(s) 1739
BtsIMutI CAGTG 3 cut(s) 223, 938, 1739
Cac8I GCNNGC 5 cut(s) 303, 440, 1530, 1627, 1678
CciI TCATGA 2 cut(s) 33, 46
CfoI GCGC 3 cut(s) 72, 388, 641
Cfr10I RCCGGY 3 cut(s) 442, 560, 791
Cfr13I GGNCC 3 cut(s) 464, 1046, 1543
ClaI ATCGAT 3 cut(s) 336, 567, 1020
CseI GACGC 2 cut(s) 235, 296
Csp6I GTAC 8 cut(s) 52, 401, 484, 751, 879, 1321, 1713, 1787
CspAI ACCGGT 1 cut(s) 791
CviQI GTAC 8 cut(s) 52, 401, 484, 751, 879, 1321, 1713, 1787
DdeI CTNAG 4 cut(s) 674, 858, 1200, 1250
DraIII CACNNNGTG 1 cut(s) 347
DrdI GACNNNNNNGTC 1 cut(s) 197
DseDI GACNNNNNNGTC 1 cut(s) 197
EaeI YGGCCR 1 cut(s) 1947
Eam1104I CTCTTC 2 cut(s) 98, 415
EarI CTCTTC 2 cut(s) 98, 415
Ecl136II GAGCTC 1 cut(s) 1303
Eco105I TACGTA 1 cut(s) 621
Eco130I CCWWGG 6 cut(s) 415, 602, 999, 1049, 1191, 1546
Eco24I GRGCYC 1 cut(s) 1305
Eco31I GGTCTC 1 cut(s) 1864
Eco32I GATATC 2 cut(s) 511, 1468
Eco47I GGWCC 1 cut(s) 1543
Eco47III AGCGCT 1 cut(s) 640
Eco53kI GAGCTC 1 cut(s) 1303
Eco57I CTGAAG 1 cut(s) 2013
Eco88I CYCGRG 1 cut(s) 1077
EcoICRI GAGCTC 1 cut(s) 1303
EcoNI CCTNNNNNAGG 1 cut(s) 281
EcoO109I RGGNCCY 1 cut(s) 1046
EcoRI GAATTC 1 cut(s) 1162
EcoRII CCWGG 3 cut(s) 282, 846, 862
EcoRV GATATC 2 cut(s) 511, 1468
EcoT14I CCWWGG 6 cut(s) 415, 602, 999, 1049, 1191, 1546
EcoT22I ATGCAT 1 cut(s) 1225
EcoT38I GRGCYC 1 cut(s) 1305
ErhI CCWWGG 6 cut(s) 415, 602, 999, 1049, 1191, 1546
FaqI GGGAC 2 cut(s) 1017, 1054
FauNDI CATATG 1 cut(s) 1168
FbaI TGATCA 1 cut(s) 2020
FblI GTMKAC 2 cut(s) 1644, 1927
Fnu4HI GCNGC 3 cut(s) 68, 786, 1776
FokI GGATG 2 cut(s) 1652, 1839
FriOI GRGCYC 1 cut(s) 1305
Fsp4HI GCNGC 3 cut(s) 68, 786, 1776
FspBI CTAG 7 cut(s) 371, 416, 887, 1050, 1529, 1626, 1923
GlaI GCGC 3 cut(s) 71, 387, 640
GluI GCNGC 3 cut(s) 68, 786, 1776
GsuI CTGGAG 2 cut(s) 124, 266
HaeII RGCGCY 2 cut(s) 73, 642
HaeIII GGCC 5 cut(s) 438, 465, 1047, 1412, 1949
HapII CCGG 8 cut(s) 294, 443, 549, 561, 774, 792, 1416, 1856
HgaI GACGC 2 cut(s) 235, 296
HhaI GCGC 3 cut(s) 72, 388, 641
Hin1I GRCGYC 1 cut(s) 288
Hin6I GCGC 3 cut(s) 70, 386, 639
HinP1I GCGC 3 cut(s) 70, 386, 639
HincII GTYRAC 2 cut(s) 538, 574
HindII GTYRAC 2 cut(s) 538, 574
HindIII AAGCTT 3 cut(s) 1109, 1366, 1511
HpaII CCGG 8 cut(s) 294, 443, 549, 561, 774, 792, 1416, 1856
HphI GGTGA 7 cut(s) 51, 202, 316, 679, 722, 886, 1310
Hpy166II GTNNAC 7 cut(s) 538, 574, 811, 1543, 1645, 1928, 2064
Hpy188I TCNGA 8 cut(s) 206, 528, 744, 1228, 1260, 1561, 1639, 1655
Hpy188III TCNNGA 9 cut(s) 34, 47, 188, 471, 517, 1416, 1601, 1794, 1856
Hpy8I GTNNAC 7 cut(s) 538, 574, 811, 1543, 1645, 1928, 2064
Hpy99I CGWCG 2 cut(s) 251, 269
HpyCH4III ACNGT 6 cut(s) 20, 42, 218, 646, 1865, 2061
HpyCH4IV ACGT 3 cut(s) 346, 620, 1506
HpyCH4V TGCA 8 cut(s) 116, 155, 811, 1223, 1270, 1459, 1732, 2078
HpyF10VI GCNNNNNNNGC 2 cut(s) 794, 803
HpyF3I CTNAG 4 cut(s) 674, 858, 1200, 1250
HpySE526I ACGT 3 cut(s) 346, 620, 1506
Hsp92I GRCGYC 1 cut(s) 288
HspAI GCGC 3 cut(s) 70, 386, 639
Kpn2I TCCGGA 2 cut(s) 1415, 1855
Ksp22I TGATCA 1 cut(s) 2020
LmnI GCTCC 2 cut(s) 1308, 1744
Lsp1109I GCAGC 2 cut(s) 79, 772
LweI GCATC 5 cut(s) 1232, 1264, 1795, 1929, 2093
MaeI CTAG 7 cut(s) 371, 416, 887, 1050, 1529, 1626, 1923
MaeII ACGT 3 cut(s) 346, 620, 1506
MaeIII GTNAC 4 cut(s) 650, 936, 1609, 1704
MfeI CAATTG 1 cut(s) 1569
MflI RGATCY 3 cut(s) 395, 994, 1196
MhlI GDGCHC 5 cut(s) 433, 709, 813, 1305, 1852
MlsI TGGCCA 1 cut(s) 1949
MluNI TGGCCA 1 cut(s) 1949
MlyI GAGTC 2 cut(s) 201, 1007
MmeI TCCRAC 3 cut(s) 229, 1470, 1539
Mox20I TGGCCA 1 cut(s) 1949
Mph1103I ATGCAT 1 cut(s) 1225
MroI TCCGGA 2 cut(s) 1415, 1855
MscI TGGCCA 1 cut(s) 1949
MseI TTAA 7 cut(s) 125, 405, 699, 1008, 1179, 1212, 1902
MslI CAYNNNNRTG 2 cut(s) 18, 806
Msp20I TGGCCA 1 cut(s) 1949
MspCI CTTAAG 1 cut(s) 1211
MspI CCGG 8 cut(s) 294, 443, 549, 561, 774, 792, 1416, 1856
MspR9I CCNGG 4 cut(s) 284, 775, 848, 864
MunI CAATTG 1 cut(s) 1569
MvaI CCWGG 3 cut(s) 284, 848, 864
MvnI CGCG 1 cut(s) 386
MwoI GCNNNNNNNGC 2 cut(s) 794, 803
NciI CCSGG 1 cut(s) 775
NcoI CCATGG 2 cut(s) 999, 1546
NdeI CATATG 1 cut(s) 1168
NheI GCTAGC 2 cut(s) 1528, 1625
NlaIV GGNNCC 5 cut(s) 397, 430, 706, 1286, 1582
NmeAIII GCCGAG 1 cut(s) 414
NmuCI GTSAC 1 cut(s) 936
NsiI ATGCAT 1 cut(s) 1225
NspI RCATGY 1 cut(s) 1327
NspV TTCGAA 1 cut(s) 1908
OliI CACNNNNGTG 1 cut(s) 18
PaeR7I CTCGAG 1 cut(s) 1077
PagI TCATGA 2 cut(s) 33, 46
PcsI WCGNNNNNNNCGW 1 cut(s) 1776
PfeI GAWTC 9 cut(s) 175, 338, 656, 817, 912, 1261, 1343, 1493, 1634
PflMI CCANNNNNTGG 3 cut(s) 603, 715, 869
PfoI TCCNGGA 1 cut(s) 282
PinAI ACCGGT 1 cut(s) 791
PkrI GCNGC 3 cut(s) 69, 787, 1777
PleI GAGTC 2 cut(s) 201, 1007
PpsI GAGTC 2 cut(s) 201, 1007
Ppu21I YACGTR 2 cut(s) 347, 621
Psp124BI GAGCTC 1 cut(s) 1305
Psp6I CCWGG 3 cut(s) 282, 846, 862
PspGI CCWGG 3 cut(s) 282, 846, 862
PspN4I GGNNCC 5 cut(s) 397, 430, 706, 1286, 1582
PspPI GGNCC 3 cut(s) 464, 1046, 1543
PspXI VCTCGAGB 1 cut(s) 1077
PsuI RGATCY 3 cut(s) 395, 994, 1196
RsaI GTAC 8 cut(s) 53, 402, 485, 752, 880, 1322, 1714, 1788
RsaNI GTAC 8 cut(s) 52, 401, 484, 751, 879, 1321, 1713, 1787
RseI CAYNNNNRTG 2 cut(s) 18, 806
SacI GAGCTC 1 cut(s) 1305
SaqAI TTAA 7 cut(s) 125, 405, 699, 1008, 1179, 1212, 1902
SatI GCNGC 3 cut(s) 68, 786, 1776
Sau96I GGNCC 3 cut(s) 464, 1046, 1543
ScaI AGTACT 3 cut(s) 53, 752, 1714
SchI GAGTC 2 cut(s) 201, 1007
ScrFI CCNGG 4 cut(s) 284, 775, 848, 864
SduI GDGCHC 5 cut(s) 433, 709, 813, 1305, 1852
SfaNI GCATC 5 cut(s) 1232, 1264, 1795, 1929, 2093
SfcI CTRYAG 4 cut(s) 222, 456, 1645, 2004
Sfr274I CTCGAG 1 cut(s) 1077
SfuI TTCGAA 1 cut(s) 1908
SinI GGWCC 1 cut(s) 1543
SlaI CTCGAG 1 cut(s) 1077
SmiMI CAYNNNNRTG 2 cut(s) 18, 806
SmlI CTYRAG 5 cut(s) 581, 1077, 1211, 1401, 1700
SmoI CTYRAG 5 cut(s) 581, 1077, 1211, 1401, 1700
SnaBI TACGTA 1 cut(s) 621
SpeI ACTAGT 1 cut(s) 886
SsiI CCGC 4 cut(s) 354, 497, 1680, 1776
SspI AATATT 2 cut(s) 478, 616
SspMI CTAG 7 cut(s) 371, 416, 887, 1050, 1529, 1626, 1923
SstI GAGCTC 1 cut(s) 1305
StyD4I CCNGG 4 cut(s) 282, 773, 846, 862
StyI CCWWGG 6 cut(s) 415, 602, 999, 1049, 1191, 1546
TaaI ACNGT 6 cut(s) 20, 42, 218, 646, 1865, 2061
TaiI ACGT 3 cut(s) 349, 623, 1509
TaqII GACCGA 1 cut(s) 239
TatI WGTACW 6 cut(s) 51, 750, 878, 1320, 1712, 1786
TauI GCSGC 1 cut(s) 1778
TfiI GAWTC 9 cut(s) 175, 338, 656, 817, 912, 1261, 1343, 1493, 1634
Tru1I TTAA 7 cut(s) 125, 405, 699, 1008, 1179, 1212, 1902
Tru9I TTAA 7 cut(s) 125, 405, 699, 1008, 1179, 1212, 1902
TscAI CASTG 3 cut(s) 223, 945, 1739
TseFI GTSAC 1 cut(s) 936
TseI GCWGC 2 cut(s) 67, 785
Tsp45I GTSAC 1 cut(s) 936
TspDTI ATGAA 9 cut(s) 35, 243, 370, 904, 940, 1005, 1138, 1155, 1305
TspGWI ACGGA 2 cut(s) 388, 408
TspRI CASTG 3 cut(s) 223, 945, 1739
Van91I CCANNNNNTGG 3 cut(s) 603, 715, 869
Vha464I CTTAAG 1 cut(s) 1211
VneI GTGCAC 1 cut(s) 809
VpaK11BI GGWCC 1 cut(s) 1543
XagI CCTNNNNNAGG 1 cut(s) 281
XapI RAATTY 4 cut(s) 829, 1028, 1162, 1498
XceI RCATGY 1 cut(s) 1327
XcmI CCANNNNNNNNNTGG 2 cut(s) 1336, 1591
XhoI CTCGAG 1 cut(s) 1077
XmaJI CCTAGG 2 cut(s) 415, 1049
XmiI GTMKAC 2 cut(s) 1644, 1927
XspI CTAG 7 cut(s) 371, 416, 887, 1050, 1529, 1626, 1923
ZrmI AGTACT 3 cut(s) 53, 752, 1714
Zsp2I ATGCAT 1 cut(s) 1225
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.