Rroxscaffold_5G00344530

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Reverse (-)
14650196 .. 14652184
1989 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00344530.1

Sequence Viewer

Length: 1989 bp
ATGGCAATAAATTTTCATTCTCTTAGGGGCTCGAAAAATTTCTCTATTACCTTCTTCACTTTCATCAATTTTTTGCTTCCCTTTTCCCATCCACTTTCCTTCAGTATAAGCCGCTTTGAGCCAGGTGCAAAGAACATACATTATGATGGTGATGCTGATCCTTCTTCGTTCGGAATGATTGAACTAAACCCAATCGATTCATTCCGTGTTGGCCGGGCTACATATGCAAAACCTCTGCACTTATGGGATGAGGGCTCACTGGCAGACTTCACCAGTAATTTCTCTTTCACAGTCGACACTTTTAACAATAGCTTAGGCTATTTTGCAGATGGTCTTGTCTTTTTCCTTGCTCCTGTTGATTATCCAATTCCACCCAACTCTAATGGTTCTAATCTAGGACTATTCAACAGCACAACTCGTTATGCAGCTTCCCAAAACCAAGTTGTAATGGTTGAGTTAGACACTTTCCCAAACATAGAGTATGATCCACCAGCACCGCATGTTGGGATAAATATCAACACCATCTCATCAGTTGTTAATGCTAGTTGGGATGCTAGCCTTCACAGTGGGAAAGTGGGTCATGTCCAGATAGCTTATAATGCTACCACCTACAACCTCAGTGTGTTTTGGACATATGAGGATAACTTGAACCCAGATTATGGGAGCACTAATTCTTCTCTTTCTTATATTATTGACTTAAGAAAGGTTCTGCCTGAGTGGGTTACCATTGGATTCTCAGCTGCTACTGGAGCGGTGGATGAGCGGCACGTTATATATTCATGGGATTTCAGTTCTGATTTGGATTCAGAAGAGACTAGCAAGAATGAGTGGATGTCAATCTTGATCGAGGTGGTTGCAGCTTCTTTGTTCGGTTTGTTGCTTGGGTGGACCATATATTGGTTCGTCAGAAGGAAGAGGATAAGAAGACTAGCCTCGAAAGATGCAAAAGGAAATGGCAATTACTCCAATGCTGATGTACCCCGCTCTATAAATGCAGATCTTGAGAGAGTAACCTTACCAAAACAATTTGCTTACCAAGAATTACTTGCAGCCACCGATGGCTTTGCAGATGGTAGTATATTAGGCCAAGGAGGTTCTGGACGAGTTTATAAAGGAATCCTTCGGGACCTAGGATTTACAGTTGCTGTCAAGATGATTATTGCAGAATCTGATCCGAACTATGAGAAAACATTCACCAATGAAGTTAAGATCATAAGCCGCTTAATCCATCGGAACCTGGTGCAATTTATTGGATGGTGTTACAAGGAAGGAGAATGTCTACTTGTTTATGCCTACATGCCAAACAGCAGCCTTGATAAGCATCTGTTTGGCTCCAGAACAACCCTACAGTGGCATTTGAGGCATAAGATCGCTTTAGATCTAGCCTCAGCCCTTCATTACCTGCATGAAGATGCAGAGCAGCCAGTACTTCATAGGGATATCAAATCAGCTAACGTCTTGTTGGACAAGGATTTCAACTGTAAGCTCGGTGATTTTGGGATTTCTAAACTTGTGGATCCCCGGTTTAGGACTCAGACAACGAGGGTGGTAGGGACTTTGGGATACATCGCCCCAGAATACGCAAACGAAGGGAGGGCCAGTAAAGAATCAGACATGTTTAGTTTTGGAGTTCTGACCTTGGAACTTGCATGTGGAGATAGGGCTTACCAGGATGAAAGATTTCAGGTCGCACTTGTCAGTCAGGTTTGGCGACATTACCTTTCTGGAAATCTTCTGGATGTAGCTGATAAGAGACTGGATATGATATTTGATCAAAGGCAAATGAAATGCTTGTTAAATGTGGGATTATGGTGCACCAACCCTAACAGCAAGGAGAGACCAAAAGCTGGAGATGTAATGAAGGTGCTTCAGCTTGAAGCACCACTGCCGGAACTTCCACATGACATGCATGACCGTCCACTGCCTCAACGTCAAGATCAAGCTGGATCTTCTCACTTATCCTTAACTTCTAGCTTAGAATGTCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

662

Amino Acids

74.39

Weight (kDa)

5.76

Isoelectric Point (pI)

39.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 32 - 275 8.6e-67 Legume lectin domain
Lectin_L-type_dom PF18483 44 - 257 7e-07 Legume lectin beta-barrel domain
Pkinase PF00069 357 - 620 3.3e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 360 - 559 1.5e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 597, 1110
Acc36I ACCTGC 1 cut(s) 1410
AccB7I CCANNNNNTGG 3 cut(s) 659, 897, 1847
AccBSI CCGCTC 3 cut(s) 752, 763, 984
AccI GTMKAC 2 cut(s) 294, 1279
AciI CCGC 6 cut(s) 112, 497, 752, 763, 982, 1219
AclWI GGATC 6 cut(s) 152, 479, 1166, 1511, 1524, 1954
AcoI YGGCCR 1 cut(s) 211
AcsI RAATTY 2 cut(s) 10, 37
AcuI CTGAAG 2 cut(s) 85, 1853
AfaI GTAC 2 cut(s) 978, 1428
AfiI CCNNNNNNNGG 6 cut(s) 503, 659, 897, 1350, 1527, 1847
AflII CTTAAG 1 cut(s) 697
AflIII ACRYGT 1 cut(s) 1614
AgsI TTSAA 5 cut(s) 182, 406, 649, 1477, 1877
AjnI CCWGG 3 cut(s) 121, 1236, 1668
Alw21I GWGCWC 2 cut(s) 668, 1817
Alw26I GTCTC 3 cut(s) 806, 1747, 1831
Alw44I GTGCAC 1 cut(s) 1813
AlwI GGATC 6 cut(s) 152, 479, 1166, 1511, 1524, 1954
AlwNI CAGNNNCTG 2 cut(s) 1145, 1169
AoxI GGCC 3 cut(s) 211, 1084, 1596
ApaLI GTGCAC 1 cut(s) 1813
ApeKI GCWGC 6 cut(s) 425, 740, 857, 1049, 1308, 1420
ApoI RAATTY 2 cut(s) 10, 37
Asp700I GAANNNNTTC 3 cut(s) 38, 1190, 1680
AspA2I CCTAGG 1 cut(s) 1129
AspS9I GGNCC 3 cut(s) 888, 1126, 1596
AsuC2I CCSGG 2 cut(s) 215, 1522
AsuHPI GGTGA 4 cut(s) 161, 262, 1186, 1502
AsuNHI GCTAGC 1 cut(s) 554
AvaII GGWCC 2 cut(s) 888, 1126
AvrII CCTAGG 1 cut(s) 1129
BaeGI GKGCMC 1 cut(s) 1817
BamHI GGATCC 1 cut(s) 1516
BanII GRGCYC 2 cut(s) 32, 257
BbsI GAAGAC 1 cut(s) 931
Bbv12I GWGCWC 2 cut(s) 668, 1817
BbvCI CCTCAGC 1 cut(s) 1387
BbvI GCAGC 6 cut(s) 437, 727, 869, 1061, 1320, 1432
BccI CCATC 8 cut(s) 96, 140, 323, 530, 1052, 1064, 1236, 1248
BcgI CGANNNNNNTGC 4 cut(s) 836, 870, 1046, 1080
BciT130I CCWGG 3 cut(s) 123, 1238, 1670
BciVI GTATCC 1 cut(s) 1556
BclI TGATCA 1 cut(s) 1771
BcnI CCSGG 2 cut(s) 215, 1522
BcoDI GTCTC 3 cut(s) 806, 1747, 1831
BfaI CTAG 8 cut(s) 395, 543, 555, 816, 929, 1130, 1382, 1971
BfmI CTRYAG 1 cut(s) 1346
BfrI CTTAAG 1 cut(s) 697
BfuAI ACCTGC 1 cut(s) 1410
BfuI GTATCC 1 cut(s) 1556
BglII AGATCT 2 cut(s) 997, 1378
BisI GCNGC 9 cut(s) 112, 426, 741, 764, 858, 1050, 1219, 1309, 1421
BlnI CCTAGG 1 cut(s) 1129
BlsI GCNGC 9 cut(s) 113, 427, 742, 765, 859, 1051, 1220, 1310, 1422
BmcAI AGTACT 1 cut(s) 1428
Bme1390I CCNGG 5 cut(s) 123, 215, 1238, 1522, 1670
Bme18I GGWCC 2 cut(s) 888, 1126
BmgT120I GGNCC 3 cut(s) 888, 1126, 1596
BmiI GGNNCC 4 cut(s) 1127, 1235, 1333, 1518
BmrFI CCNGG 5 cut(s) 123, 215, 1238, 1522, 1670
BmsI GCATC 5 cut(s) 142, 541, 931, 1330, 1402
BmtI GCTAGC 1 cut(s) 558
BpiI GAAGAC 1 cut(s) 931
BpmI CTGGAG 3 cut(s) 768, 1318, 1869
Bpu10I CCTNAGC 2 cut(s) 313, 1387
BpuEI CTTGAG 1 cut(s) 1022
BpuMI CCSGG 2 cut(s) 215, 1522
Bsa29I ATCGAT 1 cut(s) 195
BsaBI GATNNNNATC 4 cut(s) 156, 512, 836, 1320
BsaI GGTCTC 1 cut(s) 1831
BsaJI CCNNGG 4 cut(s) 1087, 1129, 1520, 1638
BsaXI ACNNNNNCTCC 2 cut(s) 1585, 1615
Bsc4I CCNNNNNNNGG 6 cut(s) 503, 659, 897, 1350, 1527, 1847
Bse1I ACTGG 6 cut(s) 264, 273, 751, 1424, 1599, 1761
Bse8I GATNNNNATC 4 cut(s) 156, 512, 836, 1320
BseBI CCWGG 3 cut(s) 123, 1238, 1670
BseCI ATCGAT 1 cut(s) 195
BseDI CCNNGG 4 cut(s) 1087, 1129, 1520, 1638
BseGI GGATG 8 cut(s) 88, 253, 556, 763, 837, 1259, 1678, 1744
BseJI GATNNNNATC 4 cut(s) 156, 512, 836, 1320
BseLI CCNNNNNNNGG 6 cut(s) 503, 659, 897, 1350, 1527, 1847
BseMII CTCAG 5 cut(s) 631, 705, 750, 1401, 1547
BseNI ACTGG 6 cut(s) 264, 273, 751, 1424, 1599, 1761
BseSI GKGCMC 1 cut(s) 1817
BseXI GCAGC 6 cut(s) 437, 727, 869, 1061, 1320, 1432
BsgI GTGCAG 1 cut(s) 221
BshFI GGCC 3 cut(s) 213, 1086, 1598
BshVI ATCGAT 1 cut(s) 195
BsiHKAI GWGCWC 2 cut(s) 668, 1817
BsiSI CCGG 3 cut(s) 214, 1522, 1889
BslFI GGGAC 2 cut(s) 1139, 1567
BslI CCNNNNNNNGG 6 cut(s) 503, 659, 897, 1350, 1527, 1847
BsmAI GTCTC 3 cut(s) 806, 1747, 1831
BsmFI GGGAC 2 cut(s) 1139, 1567
BsnI GGCC 3 cut(s) 213, 1086, 1598
Bso31I GGTCTC 1 cut(s) 1831
Bsp1286I GDGCHC 4 cut(s) 32, 257, 668, 1817
BspACI CCGC 6 cut(s) 112, 497, 752, 763, 982, 1219
BspANI GGCC 3 cut(s) 213, 1086, 1598
BspCNI CTCAG 5 cut(s) 630, 706, 749, 1400, 1546
BspDI ATCGAT 1 cut(s) 195
BspLI GGNNCC 4 cut(s) 1127, 1235, 1333, 1518
BspMI ACCTGC 1 cut(s) 1410
BspOI GCTAGC 1 cut(s) 558
BspPI GGATC 6 cut(s) 152, 479, 1166, 1511, 1524, 1954
BspTI CTTAAG 1 cut(s) 697
BspTNI GGTCTC 1 cut(s) 1831
BsrBI CCGCTC 3 cut(s) 752, 763, 984
BsrI ACTGG 6 cut(s) 264, 273, 751, 1424, 1599, 1761
BssECI CCNNGG 4 cut(s) 1087, 1129, 1520, 1638
BssT1I CCWWGG 3 cut(s) 1087, 1129, 1638
Bst2UI CCWGG 3 cut(s) 123, 1238, 1670
Bst4CI ACNGT 6 cut(s) 292, 566, 1141, 1350, 1481, 1916
Bst6I CTCTTC 2 cut(s) 804, 908
BstAFI CTTAAG 1 cut(s) 697
BstC8I GCNNGC 1 cut(s) 556
BstDEI CTNAG 8 cut(s) 23, 313, 617, 714, 736, 1387, 1533, 1975
BstEII GGTNACC 1 cut(s) 721
BstF5I GGATG 8 cut(s) 88, 253, 556, 763, 837, 1259, 1678, 1744
BstMAI GTCTC 3 cut(s) 806, 1747, 1831
BstMWI GCNNNNNNNGC 4 cut(s) 224, 599, 749, 1360
BstNI CCWGG 3 cut(s) 123, 1238, 1670
BstNSI RCATGY 5 cut(s) 503, 1300, 1618, 1653, 1909
BstPI GGTNACC 1 cut(s) 721
BstSCI CCNGG 5 cut(s) 121, 213, 1236, 1520, 1668
BstSFI CTRYAG 1 cut(s) 1346
BstSLI GKGCMC 1 cut(s) 1817
BstV1I GCAGC 6 cut(s) 437, 727, 869, 1061, 1320, 1432
BstV2I GAAGAC 1 cut(s) 931
BstX2I RGATCY 4 cut(s) 997, 1378, 1516, 1946
BstYI RGATCY 4 cut(s) 997, 1378, 1516, 1946
Bsu15I ATCGAT 1 cut(s) 195
BsuI GTATCC 1 cut(s) 1556
BsuRI GGCC 3 cut(s) 213, 1086, 1598
BsuTUI ATCGAT 1 cut(s) 195
BtgZI GCGATG 1 cut(s) 1552
BtsCI GGATG 8 cut(s) 88, 253, 556, 763, 837, 1259, 1678, 1744
BtsI GCAGTG 2 cut(s) 1883, 1919
BtsIMutI CAGTG 6 cut(s) 257, 571, 625, 1355, 1883, 1919
BveI ACCTGC 1 cut(s) 1410
Cac8I GCNNGC 1 cut(s) 556
CaiI CAGNNNCTG 2 cut(s) 1145, 1169
Cfr13I GGNCC 3 cut(s) 888, 1126, 1596
ClaI ATCGAT 1 cut(s) 195
CsiI ACCWGGT 1 cut(s) 1236
Csp6I GTAC 2 cut(s) 977, 1427
CspCI CAANNNNNGTGG 2 cut(s) 1527, 1562
CviQI GTAC 2 cut(s) 977, 1427
DdeI CTNAG 8 cut(s) 23, 313, 617, 714, 736, 1387, 1533, 1975
EaeI YGGCCR 1 cut(s) 211
Eam1104I CTCTTC 2 cut(s) 804, 908
EarI CTCTTC 2 cut(s) 804, 908
Eco130I CCWWGG 3 cut(s) 1087, 1129, 1638
Eco24I GRGCYC 2 cut(s) 32, 257
Eco31I GGTCTC 1 cut(s) 1831
Eco32I GATATC 1 cut(s) 1441
Eco47I GGWCC 2 cut(s) 888, 1126
Eco57I CTGAAG 2 cut(s) 85, 1853
Eco91I GGTNACC 1 cut(s) 721
EcoO109I RGGNCCY 1 cut(s) 1126
EcoO65I GGTNACC 1 cut(s) 721
EcoRII CCWGG 3 cut(s) 121, 1236, 1668
EcoRV GATATC 1 cut(s) 1441
EcoT14I CCWWGG 3 cut(s) 1087, 1129, 1638
EcoT22I ATGCAT 1 cut(s) 1911
EcoT38I GRGCYC 2 cut(s) 32, 257
ErhI CCWWGG 3 cut(s) 1087, 1129, 1638
FalI AAGNNNNNCTT 4 cut(s) 1029, 1061, 1104, 1136
FaqI GGGAC 2 cut(s) 1139, 1567
FauI CCCGC 1 cut(s) 989
FauNDI CATATG 2 cut(s) 223, 634
FbaI TGATCA 1 cut(s) 1771
FblI GTMKAC 2 cut(s) 294, 1279
Fnu4HI GCNGC 9 cut(s) 112, 426, 741, 764, 858, 1050, 1219, 1309, 1421
FokI GGATG 8 cut(s) 75, 260, 563, 770, 844, 1266, 1685, 1751
FriOI GRGCYC 2 cut(s) 32, 257
Fsp4HI GCNGC 9 cut(s) 112, 426, 741, 764, 858, 1050, 1219, 1309, 1421
FspBI CTAG 8 cut(s) 395, 543, 555, 816, 929, 1130, 1382, 1971
GluI GCNGC 9 cut(s) 112, 426, 741, 764, 858, 1050, 1219, 1309, 1421
GsuI CTGGAG 3 cut(s) 768, 1318, 1869
HaeIII GGCC 3 cut(s) 213, 1086, 1598
HapII CCGG 3 cut(s) 214, 1522, 1889
HincII GTYRAC 1 cut(s) 295
HindII GTYRAC 1 cut(s) 295
HinfI GANTC 7 cut(s) 197, 732, 803, 1116, 1166, 1531, 1607
HpaII CCGG 3 cut(s) 214, 1522, 1889
HphI GGTGA 4 cut(s) 161, 262, 1186, 1502
Hpy166II GTNNAC 5 cut(s) 295, 888, 1280, 1815, 1919
Hpy8I GTNNAC 5 cut(s) 295, 888, 1280, 1815, 1919
HpyCH4III ACNGT 6 cut(s) 292, 566, 1141, 1350, 1481, 1916
HpyCH4IV ACGT 3 cut(s) 768, 1455, 1930
HpyF10VI GCNNNNNNNGC 4 cut(s) 224, 599, 749, 1360
HpyF3I CTNAG 8 cut(s) 23, 313, 617, 714, 736, 1387, 1533, 1975
HpySE526I ACGT 3 cut(s) 768, 1455, 1930
Ksp22I TGATCA 1 cut(s) 1771
LmnI GCTCC 4 cut(s) 355, 663, 749, 1337
Lsp1109I GCAGC 6 cut(s) 437, 727, 869, 1061, 1320, 1432
LweI GCATC 5 cut(s) 142, 541, 931, 1330, 1402
MabI ACCWGGT 1 cut(s) 1236
MaeI CTAG 8 cut(s) 395, 543, 555, 816, 929, 1130, 1382, 1971
MaeII ACGT 3 cut(s) 768, 1455, 1930
MaeIII GTNAC 3 cut(s) 721, 1009, 1259
MbiI CCGCTC 3 cut(s) 752, 763, 984
MboII GAAGA 9 cut(s) 46, 156, 666, 821, 925, 936, 1421, 1724, 1941
MflI RGATCY 4 cut(s) 997, 1378, 1516, 1946
MhlI GDGCHC 4 cut(s) 32, 257, 668, 1817
MlyI GAGTC 1 cut(s) 1525
MmeI TCCRAC 1 cut(s) 1443
Mph1103I ATGCAT 1 cut(s) 1911
MroXI GAANNNNTTC 3 cut(s) 38, 1190, 1680
MseI TTAA 8 cut(s) 303, 537, 698, 1206, 1223, 1796, 1964, 1987
MslI CAYNNNNRTG 2 cut(s) 144, 1410
MspA1I CMGCKG 1 cut(s) 740
MspCI CTTAAG 1 cut(s) 697
MspI CCGG 3 cut(s) 214, 1522, 1889
MspR9I CCNGG 5 cut(s) 123, 215, 1238, 1522, 1670
MvaI CCWGG 3 cut(s) 123, 1238, 1670
MwoI GCNNNNNNNGC 4 cut(s) 224, 599, 749, 1360
NciI CCSGG 2 cut(s) 215, 1522
NdeI CATATG 2 cut(s) 223, 634
NheI GCTAGC 1 cut(s) 554
NlaIV GGNNCC 4 cut(s) 1127, 1235, 1333, 1518
NsiI ATGCAT 1 cut(s) 1911
NspI RCATGY 5 cut(s) 503, 1300, 1618, 1653, 1909
PciI ACATGT 1 cut(s) 1614
PdmI GAANNNNTTC 3 cut(s) 38, 1190, 1680
PfeI GAWTC 6 cut(s) 197, 732, 803, 1116, 1166, 1607
PflMI CCANNNNNTGG 3 cut(s) 659, 897, 1847
PkrI GCNGC 9 cut(s) 113, 427, 742, 765, 859, 1051, 1220, 1310, 1422
PleI GAGTC 1 cut(s) 1525
PpsI GAGTC 1 cut(s) 1525
PpuMI RGGWCCY 1 cut(s) 1126
PscI ACATGT 1 cut(s) 1614
PsiI TTATAA 2 cut(s) 597, 1110
Psp5II RGGWCCY 1 cut(s) 1126
Psp6I CCWGG 3 cut(s) 121, 1236, 1668
PspEI GGTNACC 1 cut(s) 721
PspGI CCWGG 3 cut(s) 121, 1236, 1668
PspN4I GGNNCC 4 cut(s) 1127, 1235, 1333, 1518
PspPI GGNCC 3 cut(s) 888, 1126, 1596
PspPPI RGGWCCY 1 cut(s) 1126
PstNI CAGNNNCTG 2 cut(s) 1145, 1169
PsuI RGATCY 4 cut(s) 997, 1378, 1516, 1946
PvuII CAGCTG 1 cut(s) 740
RsaI GTAC 2 cut(s) 978, 1428
RsaNI GTAC 2 cut(s) 977, 1427
RseI CAYNNNNRTG 2 cut(s) 144, 1410
SalI GTCGAC 1 cut(s) 293
SaqAI TTAA 8 cut(s) 303, 537, 698, 1206, 1223, 1796, 1964, 1987
SatI GCNGC 9 cut(s) 112, 426, 741, 764, 858, 1050, 1219, 1309, 1421
Sau96I GGNCC 3 cut(s) 888, 1126, 1596
ScaI AGTACT 1 cut(s) 1428
SchI GAGTC 1 cut(s) 1525
ScrFI CCNGG 5 cut(s) 123, 215, 1238, 1522, 1670
SduI GDGCHC 4 cut(s) 32, 257, 668, 1817
SexAI ACCWGGT 1 cut(s) 1236
SfaNI GCATC 5 cut(s) 142, 541, 931, 1330, 1402
SfcI CTRYAG 1 cut(s) 1346
SinI GGWCC 2 cut(s) 888, 1126
SmiMI CAYNNNNRTG 2 cut(s) 144, 1410
SmlI CTYRAG 2 cut(s) 697, 1001
SmoI CTYRAG 2 cut(s) 697, 1001
SsiI CCGC 6 cut(s) 112, 497, 752, 763, 982, 1219
SspMI CTAG 8 cut(s) 395, 543, 555, 816, 929, 1130, 1382, 1971
StyD4I CCNGG 5 cut(s) 121, 213, 1236, 1520, 1668
StyI CCWWGG 3 cut(s) 1087, 1129, 1638
TaaI ACNGT 6 cut(s) 292, 566, 1141, 1350, 1481, 1916
TaiI ACGT 3 cut(s) 771, 1458, 1933
TaqI TCGA 5 cut(s) 32, 195, 294, 846, 935
TatI WGTACW 1 cut(s) 1426
TauI GCSGC 3 cut(s) 114, 766, 1221
TfiI GAWTC 6 cut(s) 197, 732, 803, 1116, 1166, 1607
Tru1I TTAA 8 cut(s) 303, 537, 698, 1206, 1223, 1796, 1964, 1987
Tru9I TTAA 8 cut(s) 303, 537, 698, 1206, 1223, 1796, 1964, 1987
TscAI CASTG 6 cut(s) 264, 571, 625, 1355, 1890, 1926
TseI GCWGC 6 cut(s) 425, 740, 857, 1049, 1308, 1420
TspGWI ACGGA 1 cut(s) 194
TspRI CASTG 6 cut(s) 264, 571, 625, 1355, 1890, 1926
Van91I CCANNNNNTGG 3 cut(s) 659, 897, 1847
Vha464I CTTAAG 1 cut(s) 697
VneI GTGCAC 1 cut(s) 1813
VpaK11BI GGWCC 2 cut(s) 888, 1126
XapI RAATTY 2 cut(s) 10, 37
XceI RCATGY 5 cut(s) 503, 1300, 1618, 1653, 1909
XcmI CCANNNNNNNNNTGG 1 cut(s) 1094
XmaJI CCTAGG 1 cut(s) 1129
XmiI GTMKAC 2 cut(s) 294, 1279
XmnI GAANNNNTTC 3 cut(s) 38, 1190, 1680
XspI CTAG 8 cut(s) 395, 543, 555, 816, 929, 1130, 1382, 1971
ZrmI AGTACT 1 cut(s) 1428
Zsp2I ATGCAT 1 cut(s) 1911
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.