RLG00000033360

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
26229123 .. 26231306
2184 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033360

Sequence Viewer

Length: 1869 bp
ATGGCTGTCAACATAACAGCACTCCAATTCTCACCAGAGTGGCTTCAGTTCCTTCTTCTTCTCTTGTTTGTTTTAACCTTGTCTGCAACTCCATTGACTTTCAACTTCTCCAGCTTTCCCGCCAACACCAAGACTCTATTTCTAGAGGGAGATGCTTTCACCGACGGCTCCCTCCGACTCACCAAAAGTTCTCTTGATGACGCAATAAACTGGAGCACCGGTAGAGCCACCTTCGGTGAATCGTTCCTCCTCCGGCAGAATGAAAAACTAGCTGATTTCACTTCAAGTTTCATATTCTCCATCAACACCCCCAATGTCACCAACTGCGGTGACGGCTTGGTGTTCTTCCTTGCTCCAAACGGTTCCTTACTCGACCAGGCCTTAGGAAGAGGTAGCAAACTTGGCCTCCCTGTCAACATTACGCTGCCAAAATTTACCACCAGCTACGCGTTTGTGGCAATCGAGTTTGATATCTTCCCTAATGGGCCTAATTCAGACCAACCAACAATCGAAGATCCTGATTACGATCATGTGGGGATCGACATCAACTCTGTCAAGTCTAATCTTACCACGGAATGGAGTGGTGGTATCATTGAAGGAAAACAAAATAATGCCACAATTAGCTACAACTCTAGCTCAAAAAATCTTAGTGTTGCCTTCACTACTTTTGTAGATCGTTACAGGAAAGTACAGGTGATCAAAAAAATTTATTGCTTGATTGATCTGCTTCAATACTTGCCCGATAGGGTCATTGTTGGATTCTCTGCTTCCACGGGTGTTGCAGTTGCTCTGCATAAGATCATTGCATGGAATTTTACCTCCACTCTTCTGGAGGATGATAATTCGACAAACAACAATCCTCTGGCTCGCAATAGTGCGACAACATCCAACAACAACGTAGGACTAGCTGTCGGATTGGGTGTTGGTGGATGTGTTACCTTGGTTGGTGCATTGGCTTTGGTTTGGTACGTCTTCTGCAGGAAGAAGAGGGGAACAGCTGGGGAAAGTACTACTGATGATGATACTTTGGATATTCATGATTTGGTTCCTGATGAATTCGAAAAGGGGATAGGCTCCAGGAAGTTTTCCTACAATGAATTGGCCCAAGCAACTAACAATTTTGCACAAGGAGAAAAGCTTGGGGAAGGAGGATTTGGCCGAGTTTATAGAGGCTGCATCAAAGATTTGGACTCATATGTCGCTGTTAAGAAGATATCCCGAGGGTCCAAACAAGGGTTGAAGGAGTATGCAGCAGAAGTGAGTATCATCAGTCAGCTGAGGCATCGGAATCTAGTGCAACTAATTGGTTGGTGCCACGAAAAGAAACTCCTACTTGTCTACGAATATATGCCCAACGGAAGCTTAGATGCTCATCTGTTCAAAGAAGAAAGCATGTTAACTTGGGAGGTGAGGTATGAAGAGAGGCAAATCAATATGGTGAAGTGGGTTTGGGAGCTCTATGGAGATGGGAAAATTATCGAAGCAGCTGATCCGAAACTGCGTGGAGAGTTTGATGTGAAACAAATGGAGTGTTTATTGATGGTTGGGTTGTGGTGCGCTCGTCCGGATTACAATTTCAGGCCCTTGATACAAGAAGCAATACGAGTGCTTAACTTCGAAGTTCCATTGCCTGTTCTCCCACCAAAGATGTCAATGGATTTTGGTCTTCCATTATCACTCTCAACGTTGTCCAATAGCGACGCTACTGGAGGTCAAAGTGAGCCATCCATCAATTCTTCACAGTTGGCGGTATCTTCTACAACAAACTCTAATCCATCAGCAACATTTCAGTACGCAGAGTTACCATTACTTGTTGCTAGTAAATTTGATAATCTCTATTCTCGAGTTTTTCATGAATTTATGTTATAA

Protein Analysis

623

Amino Acids

68.85

Weight (kDa)

5.21

Isoelectric Point (pI)

31.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 32 - 284 1.8e-52 Legume lectin domain
Lectin_L-type_dom PF18483 52 - 267 5.2e-07 Legume lectin beta-barrel domain
Pkinase PF00069 375 - 470 5.3e-16 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 376 - 468 6.6e-18 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1867
AasI GACNNNNNNGTC 1 cut(s) 1196
AccB1I GGYRCC 1 cut(s) 1311
AccB7I CCANNNNNTGG 1 cut(s) 576
AccI GTMKAC 1 cut(s) 1338
AccII CGCG 1 cut(s) 449
AccIII TCCGGA 1 cut(s) 1564
AciI CCGC 3 cut(s) 120, 327, 1748
AclI AACGTT 1 cut(s) 1685
AclWI GGATC 3 cut(s) 509, 545, 1484
AcoI YGGCCR 1 cut(s) 1156
AcsI RAATTY 6 cut(s) 431, 705, 811, 1055, 1823, 1856
AcuI CTGAAG 1 cut(s) 29
AfaI GTAC 4 cut(s) 690, 968, 1009, 1793
AfiI CCNNNNNNNGG 2 cut(s) 576, 1233
AflIII ACRYGT 1 cut(s) 447
AgeI ACCGGT 1 cut(s) 218
AgsI TTSAA 6 cut(s) 103, 285, 596, 731, 1240, 1381
AhdI GACNNNNNGTC 1 cut(s) 908
AjnI CCWGG 2 cut(s) 375, 1076
AjuI GAANNNNNNNTTGG 2 cut(s) 1137, 1169
AleI CACNNNNGTG 1 cut(s) 37
Alw21I GWGCWC 2 cut(s) 218, 1458
AlwI GGATC 3 cut(s) 509, 545, 1484
Ama87I CYCGRG 2 cut(s) 1218, 1842
Aor13HI TCCGGA 1 cut(s) 1564
AoxI GGCC 6 cut(s) 378, 403, 485, 1101, 1156, 1580
ApeKI GCWGC 4 cut(s) 424, 1173, 1250, 1484
ApoI RAATTY 6 cut(s) 431, 705, 811, 1055, 1823, 1856
AsiGI ACCGGT 1 cut(s) 218
AspLEI GCGC 1 cut(s) 1559
AspS9I GGNCC 4 cut(s) 485, 1102, 1224, 1581
AsuHPI GGTGA 9 cut(s) 24, 151, 172, 248, 310, 341, 706, 1420, 1450
AsuII TTCGAA 2 cut(s) 1059, 1617
AvaI CYCGRG 2 cut(s) 1218, 1842
AvaII GGWCC 1 cut(s) 1224
AxyI CCTNAGG 1 cut(s) 382
BanI GGYRCC 1 cut(s) 1311
BanII GRGCYC 1 cut(s) 1458
BarI GAAGNNNNNNTAC 2 cut(s) 1073, 1105
BbsI GAAGAC 2 cut(s) 964, 1658
Bbv12I GWGCWC 2 cut(s) 218, 1458
BbvCI CCTCAGC 1 cut(s) 1277
BbvI GCAGC 4 cut(s) 411, 1160, 1262, 1496
BccI CCATC 6 cut(s) 308, 1460, 1534, 1732, 1736, 1783
BceAI ACGGC 2 cut(s) 181, 349
BciT130I CCWGG 2 cut(s) 377, 1078
BclI TGATCA 1 cut(s) 696
BfaI CTAG 6 cut(s) 143, 269, 633, 905, 1292, 1818
BfmI CTRYAG 1 cut(s) 976
BisI GCNGC 4 cut(s) 425, 1174, 1251, 1485
BlsI GCNGC 4 cut(s) 426, 1175, 1252, 1486
BmcAI AGTACT 1 cut(s) 1009
Bme1390I CCNGG 2 cut(s) 377, 1078
Bme18I GGWCC 1 cut(s) 1224
BmeRI GACNNNNNGTC 1 cut(s) 908
BmeT110I CYCGRG 2 cut(s) 1218, 1842
BmgT120I GGNCC 4 cut(s) 485, 1102, 1224, 1581
BmiI GGNNCC 6 cut(s) 169, 364, 1047, 1075, 1225, 1313
BmrFI CCNGG 2 cut(s) 377, 1078
BmsI GCATC 4 cut(s) 142, 1185, 1291, 1357
BpiI GAAGAC 2 cut(s) 964, 1658
BpmI CTGGAG 5 cut(s) 94, 232, 851, 1060, 1728
Bpu10I CCTNAGC 1 cut(s) 1277
Bpu14I TTCGAA 2 cut(s) 1059, 1617
BsaBI GATNNNNATC 3 cut(s) 525, 542, 1371
BsaJI CCNNGG 4 cut(s) 570, 771, 939, 1219
BsaWI WCCGGW 2 cut(s) 218, 1564
BsaXI ACNNNNNCTCC 8 cut(s) 205, 235, 390, 420, 571, 601, 1397, 1427
Bsc4I CCNNNNNNNGG 2 cut(s) 576, 1233
Bse118I RCCGGY 1 cut(s) 218
Bse1I ACTGG 2 cut(s) 215, 1711
Bse21I CCTNAGG 1 cut(s) 382
Bse3DI GCAATG 2 cut(s) 801, 1625
Bse8I GATNNNNATC 3 cut(s) 525, 542, 1371
BseAI TCCGGA 1 cut(s) 1564
BseBI CCWGG 2 cut(s) 377, 1078
BseDI CCNNGG 4 cut(s) 570, 771, 939, 1219
BseGI GGATG 4 cut(s) 841, 884, 935, 1724
BseJI GATNNNNATC 3 cut(s) 525, 542, 1371
BseLI CCNNNNNNNGG 2 cut(s) 576, 1233
BseMI GCAATG 2 cut(s) 801, 1625
BseMII CTCAG 1 cut(s) 1268
BseNI ACTGG 2 cut(s) 215, 1711
BseRI GAGGAG 1 cut(s) 239
BseXI GCAGC 4 cut(s) 411, 1160, 1262, 1496
BseYI CCCAGC 1 cut(s) 998
Bsh1236I CGCG 1 cut(s) 449
BshFI GGCC 6 cut(s) 380, 405, 487, 1103, 1158, 1582
BshNI GGYRCC 1 cut(s) 1311
BshTI ACCGGT 1 cut(s) 218
BsiHKAI GWGCWC 2 cut(s) 218, 1458
BsiHKCI CYCGRG 2 cut(s) 1218, 1842
BsiSI CCGG 3 cut(s) 219, 253, 1565
BslI CCNNNNNNNGG 2 cut(s) 576, 1233
BsnI GGCC 6 cut(s) 380, 405, 487, 1103, 1158, 1582
BsoBI CYCGRG 2 cut(s) 1218, 1842
Bsp119I TTCGAA 2 cut(s) 1059, 1617
Bsp1286I GDGCHC 2 cut(s) 218, 1458
Bsp13I TCCGGA 1 cut(s) 1564
Bsp143I GATC 8 cut(s) 514, 526, 537, 673, 696, 721, 798, 1489
BspACI CCGC 3 cut(s) 120, 327, 1748
BspANI GGCC 6 cut(s) 380, 405, 487, 1103, 1158, 1582
BspCNI CTCAG 1 cut(s) 1269
BspEI TCCGGA 1 cut(s) 1564
BspFNI CGCG 1 cut(s) 449
BspHI TCATGA 2 cut(s) 1036, 1852
BspLI GGNNCC 6 cut(s) 169, 364, 1047, 1075, 1225, 1313
BspMAI CTGCAG 1 cut(s) 980
BspPI GGATC 3 cut(s) 509, 545, 1484
BspT104I TTCGAA 2 cut(s) 1059, 1617
BspT107I GGYRCC 1 cut(s) 1311
BsrDI GCAATG 2 cut(s) 801, 1625
BsrFI RCCGGY 1 cut(s) 218
BsrI ACTGG 2 cut(s) 215, 1711
BssAI RCCGGY 1 cut(s) 218
BssECI CCNNGG 4 cut(s) 570, 771, 939, 1219
BssMI GATC 8 cut(s) 514, 526, 537, 673, 696, 721, 798, 1489
BssT1I CCWWGG 1 cut(s) 939
Bst2UI CCWGG 2 cut(s) 377, 1078
Bst4CI ACNGT 2 cut(s) 362, 1743
Bst6I CTCTTC 4 cut(s) 382, 831, 980, 1413
BstBI TTCGAA 2 cut(s) 1059, 1617
BstC8I GCNNGC 1 cut(s) 868
BstDEI CTNAG 4 cut(s) 382, 647, 1277, 1363
BstDSI CCRYGG 2 cut(s) 570, 771
BstF5I GGATG 4 cut(s) 841, 884, 935, 1724
BstFNI CGCG 1 cut(s) 449
BstHHI GCGC 1 cut(s) 1559
BstKTI GATC 8 cut(s) 517, 529, 540, 676, 699, 724, 801, 1492
BstMBI GATC 8 cut(s) 514, 526, 537, 673, 696, 721, 798, 1489
BstMWI GCNNNNNNNGC 3 cut(s) 333, 402, 455
BstNI CCWGG 2 cut(s) 377, 1078
BstNSI RCATGY 1 cut(s) 1396
BstSCI CCNGG 2 cut(s) 375, 1076
BstSFI CTRYAG 1 cut(s) 976
BstUI CGCG 1 cut(s) 449
BstV1I GCAGC 4 cut(s) 411, 1160, 1262, 1496
BstV2I GAAGAC 2 cut(s) 964, 1658
BstX2I RGATCY 1 cut(s) 514
BstXI CCANNNNNNTGG 1 cut(s) 829
BstYI RGATCY 1 cut(s) 514
Bsu36I CCTNAGG 1 cut(s) 382
BsuRI GGCC 6 cut(s) 380, 405, 487, 1103, 1158, 1582
BtgI CCRYGG 2 cut(s) 570, 771
BtsCI GGATG 4 cut(s) 841, 884, 935, 1724
Cac8I GCNNGC 1 cut(s) 868
CciI TCATGA 2 cut(s) 1036, 1852
CfoI GCGC 1 cut(s) 1559
Cfr10I RCCGGY 1 cut(s) 218
Cfr13I GGNCC 4 cut(s) 485, 1102, 1224, 1581
CseI GACGC 2 cut(s) 209, 1709
Csp6I GTAC 4 cut(s) 689, 967, 1008, 1792
CspAI ACCGGT 1 cut(s) 218
CspCI CAANNNNNGTGG 2 cut(s) 760, 795
CviAII CATG 5 cut(s) 530, 807, 1037, 1393, 1853
CviQI GTAC 4 cut(s) 689, 967, 1008, 1792
DdeI CTNAG 4 cut(s) 382, 647, 1277, 1363
DpnI GATC 8 cut(s) 516, 528, 539, 675, 698, 723, 800, 1491
DpnII GATC 8 cut(s) 514, 526, 537, 673, 696, 721, 798, 1489
DrdI GACNNNNNNGTC 1 cut(s) 1196
DriI GACNNNNNGTC 1 cut(s) 908
DseDI GACNNNNNNGTC 1 cut(s) 1196
EaeI YGGCCR 1 cut(s) 1156
Eam1104I CTCTTC 4 cut(s) 382, 831, 980, 1413
Eam1105I GACNNNNNGTC 1 cut(s) 908
EarI CTCTTC 4 cut(s) 382, 831, 980, 1413
Ecl136II GAGCTC 1 cut(s) 1456
Eco130I CCWWGG 1 cut(s) 939
Eco147I AGGCCT 1 cut(s) 380
Eco24I GRGCYC 1 cut(s) 1458
Eco32I GATATC 2 cut(s) 472, 1215
Eco47I GGWCC 1 cut(s) 1224
Eco53kI GAGCTC 1 cut(s) 1456
Eco57I CTGAAG 1 cut(s) 29
Eco81I CCTNAGG 1 cut(s) 382
Eco88I CYCGRG 2 cut(s) 1218, 1842
EcoICRI GAGCTC 1 cut(s) 1456
EcoO109I RGGNCCY 1 cut(s) 1581
EcoRI GAATTC 1 cut(s) 1055
EcoRII CCWGG 2 cut(s) 375, 1076
EcoRV GATATC 2 cut(s) 472, 1215
EcoT14I CCWWGG 1 cut(s) 939
EcoT38I GRGCYC 1 cut(s) 1458
ErhI CCWWGG 1 cut(s) 939
FaeI CATG 5 cut(s) 533, 810, 1040, 1396, 1856
FatI CATG 5 cut(s) 529, 806, 1036, 1392, 1852
FauI CCCGC 1 cut(s) 127
FauNDI CATATG 1 cut(s) 1195
FbaI TGATCA 1 cut(s) 696
FblI GTMKAC 1 cut(s) 1338
Fnu4HI GCNGC 4 cut(s) 425, 1174, 1251, 1485
FokI GGATG 4 cut(s) 848, 871, 942, 1711
FriOI GRGCYC 1 cut(s) 1458
Fsp4HI GCNGC 4 cut(s) 425, 1174, 1251, 1485
FspBI CTAG 6 cut(s) 143, 269, 633, 905, 1292, 1818
GlaI GCGC 1 cut(s) 1558
GluI GCNGC 4 cut(s) 425, 1174, 1251, 1485
GsaI CCCAGC 1 cut(s) 1002
GsuI CTGGAG 5 cut(s) 94, 232, 851, 1060, 1728
HaeIII GGCC 6 cut(s) 380, 405, 487, 1103, 1158, 1582
HapII CCGG 3 cut(s) 219, 253, 1565
HgaI GACGC 2 cut(s) 209, 1709
HhaI GCGC 1 cut(s) 1559
Hin1II CATG 5 cut(s) 533, 810, 1040, 1396, 1856
Hin6I GCGC 1 cut(s) 1557
HinP1I GCGC 1 cut(s) 1557
HincII GTYRAC 3 cut(s) 10, 415, 1398
HindII GTYRAC 3 cut(s) 10, 415, 1398
HindIII AAGCTT 2 cut(s) 1136, 1360
HinfI GANTC 6 cut(s) 133, 177, 239, 759, 1190, 1288
HpaI GTTAAC 1 cut(s) 1398
HpaII CCGG 3 cut(s) 219, 253, 1565
HphI GGTGA 9 cut(s) 24, 151, 172, 248, 310, 341, 706, 1420, 1450
Hpy166II GTNNAC 4 cut(s) 10, 415, 1339, 1398
Hpy188I TCNGA 5 cut(s) 176, 496, 914, 1287, 1494
Hpy8I GTNNAC 4 cut(s) 10, 415, 1339, 1398
Hpy99I CGWCG 2 cut(s) 167, 1703
HpyAV CCTTC 6 cut(s) 62, 241, 590, 667, 1139, 1234
HpyCH4III ACNGT 2 cut(s) 362, 1743
HpyCH4IV ACGT 3 cut(s) 897, 969, 1685
HpyF10VI GCNNNNNNNGC 3 cut(s) 333, 402, 455
HpyF3I CTNAG 4 cut(s) 382, 647, 1277, 1363
HpySE526I ACGT 3 cut(s) 897, 969, 1685
Hsp92II CATG 5 cut(s) 533, 810, 1040, 1396, 1856
HspAI GCGC 1 cut(s) 1557
Kpn2I TCCGGA 1 cut(s) 1564
Ksp22I TGATCA 1 cut(s) 696
KspAI GTTAAC 1 cut(s) 1398
Kzo9I GATC 8 cut(s) 514, 526, 537, 673, 696, 721, 798, 1489
LmnI GCTCC 5 cut(s) 173, 213, 358, 1079, 1453
Lsp1109I GCAGC 4 cut(s) 411, 1160, 1262, 1496
LweI GCATC 4 cut(s) 142, 1185, 1291, 1357
MaeI CTAG 6 cut(s) 143, 269, 633, 905, 1292, 1818
MaeII ACGT 3 cut(s) 897, 969, 1685
MaeIII GTNAC 5 cut(s) 316, 329, 677, 934, 1800
MalI GATC 8 cut(s) 516, 528, 539, 675, 698, 723, 800, 1491
MboI GATC 8 cut(s) 514, 526, 537, 673, 696, 721, 798, 1489
MflI RGATCY 1 cut(s) 514
MhlI GDGCHC 2 cut(s) 218, 1458
MluI ACGCGT 1 cut(s) 447
MlyI GAGTC 3 cut(s) 127, 171, 1184
MmeI TCCRAC 4 cut(s) 199, 736, 892, 912
MroI TCCGGA 1 cut(s) 1564
MseI TTAA 4 cut(s) 74, 1206, 1397, 1611
MslI CAYNNNNRTG 1 cut(s) 37
MspA1I CMGCKG 3 cut(s) 998, 1276, 1487
MspI CCGG 3 cut(s) 219, 253, 1565
MspR9I CCNGG 2 cut(s) 377, 1078
MvaI CCWGG 2 cut(s) 377, 1078
MvnI CGCG 1 cut(s) 449
MwoI GCNNNNNNNGC 3 cut(s) 333, 402, 455
NdeI CATATG 1 cut(s) 1195
NdeII GATC 8 cut(s) 514, 526, 537, 673, 696, 721, 798, 1489
NlaIII CATG 5 cut(s) 533, 810, 1040, 1396, 1856
NlaIV GGNNCC 6 cut(s) 169, 364, 1047, 1075, 1225, 1313
NmeAIII GCCGAG 1 cut(s) 1184
NmuCI GTSAC 2 cut(s) 316, 329
NspI RCATGY 1 cut(s) 1396
NspV TTCGAA 2 cut(s) 1059, 1617
OliI CACNNNNGTG 1 cut(s) 37
PaeR7I CTCGAG 1 cut(s) 1842
PagI TCATGA 2 cut(s) 1036, 1852
PceI AGGCCT 1 cut(s) 380
PfeI GAWTC 3 cut(s) 239, 759, 1288
PflMI CCANNNNNTGG 1 cut(s) 576
PfoI TCCNGGA 1 cut(s) 1076
PinAI ACCGGT 1 cut(s) 218
PkrI GCNGC 4 cut(s) 426, 1175, 1252, 1486
PleI GAGTC 3 cut(s) 127, 171, 1184
PpsI GAGTC 3 cut(s) 127, 171, 1184
PsiI TTATAA 1 cut(s) 1867
Psp124BI GAGCTC 1 cut(s) 1458
Psp1406I AACGTT 1 cut(s) 1685
Psp6I CCWGG 2 cut(s) 375, 1076
PspFI CCCAGC 1 cut(s) 998
PspGI CCWGG 2 cut(s) 375, 1076
PspN4I GGNNCC 6 cut(s) 169, 364, 1047, 1075, 1225, 1313
PspPI GGNCC 4 cut(s) 485, 1102, 1224, 1581
PstI CTGCAG 1 cut(s) 980
PsuI RGATCY 1 cut(s) 514
PvuII CAGCTG 3 cut(s) 998, 1276, 1487
RsaI GTAC 4 cut(s) 690, 968, 1009, 1793
RsaNI GTAC 4 cut(s) 689, 967, 1008, 1792
RseI CAYNNNNRTG 1 cut(s) 37
SacI GAGCTC 1 cut(s) 1458
SaqAI TTAA 4 cut(s) 74, 1206, 1397, 1611
SatI GCNGC 4 cut(s) 425, 1174, 1251, 1485
Sau3AI GATC 8 cut(s) 514, 526, 537, 673, 696, 721, 798, 1489
Sau96I GGNCC 4 cut(s) 485, 1102, 1224, 1581
ScaI AGTACT 1 cut(s) 1009
SchI GAGTC 3 cut(s) 127, 171, 1184
ScrFI CCNGG 2 cut(s) 377, 1078
SduI GDGCHC 2 cut(s) 218, 1458
SfaNI GCATC 4 cut(s) 142, 1185, 1291, 1357
SfcI CTRYAG 1 cut(s) 976
Sfr274I CTCGAG 1 cut(s) 1842
SfuI TTCGAA 2 cut(s) 1059, 1617
SinI GGWCC 1 cut(s) 1224
SlaI CTCGAG 1 cut(s) 1842
SmiMI CAYNNNNRTG 1 cut(s) 37
SmlI CTYRAG 1 cut(s) 1842
SmoI CTYRAG 1 cut(s) 1842
SseBI AGGCCT 1 cut(s) 380
SsiI CCGC 3 cut(s) 120, 327, 1748
SspMI CTAG 6 cut(s) 143, 269, 633, 905, 1292, 1818
SstI GAGCTC 1 cut(s) 1458
StuI AGGCCT 1 cut(s) 380
StyD4I CCNGG 2 cut(s) 375, 1076
StyI CCWWGG 1 cut(s) 939
TaaI ACNGT 2 cut(s) 362, 1743
TaiI ACGT 3 cut(s) 900, 972, 1688
TaqI TCGA 9 cut(s) 372, 462, 510, 540, 845, 1059, 1479, 1617, 1843
TatI WGTACW 2 cut(s) 688, 1007
TfiI GAWTC 3 cut(s) 239, 759, 1288
Tru1I TTAA 4 cut(s) 74, 1206, 1397, 1611
Tru9I TTAA 4 cut(s) 74, 1206, 1397, 1611
TseFI GTSAC 2 cut(s) 316, 329
TseI GCWGC 4 cut(s) 424, 1173, 1250, 1484
Tsp45I GTSAC 2 cut(s) 316, 329
TspDTI ATGAA 8 cut(s) 276, 280, 1025, 1068, 1110, 1431, 1841, 1869
TspGWI ACGGA 2 cut(s) 587, 1371
Van91I CCANNNNNTGG 1 cut(s) 576
VpaK11BI GGWCC 1 cut(s) 1224
XapI RAATTY 6 cut(s) 431, 705, 811, 1055, 1823, 1856
XbaI TCTAGA 1 cut(s) 142
XceI RCATGY 1 cut(s) 1396
XhoI CTCGAG 1 cut(s) 1842
XmiI GTMKAC 1 cut(s) 1338
XspI CTAG 6 cut(s) 143, 269, 633, 905, 1292, 1818
ZrmI AGTACT 1 cut(s) 1009
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.