RchiOBHm_Chr5g0037251

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
31603722 .. 31606003
2282 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31599

Sequence Viewer

Length: 2166 bp
ATGGTTGTCAATCACTCCGGTGACATGGGATCAATCTGGTCAGGAAAACTTCGATTCCTTCTTGCACCAAGACTGTATCTCTTGATCTTTCTCTTCTGTCCTTCTGCAACTCCATTAAGCTTTAATTTCCCGAGCTTTAATCAAGATGATGATATTGCCAATATAACTCTAGAATCAGTCGCTGATATTAACAACGGATTTCTCTACCTCACCAGAAGCGCAGAAGACCAACCAAAGGGTGGAACTGGTCGAGCTACCTACAAGCAACCCTTCCTGCTCCGACAAAATGCAACCAGAAAACTCGCCGATTTCACCACAACTTTTACATTCTCCATTTATGCGCCAGATGATGCCAATTTAACATGGGGTGCCGGTGATGGACTGGCCTTCTTCTTAGCGCCAGACGGGTCCGAACTCAACAGCTCAAACGACGACGGCTTTGCTCTCGGCCTCCCCTTGTATCATCGGTACCCATTTGTGGCGGTGGAATTTGATATCTACAAGAACGTCAACGAATCCATCCCCAACACAAATGAAACCTTCGACGACCCATTCGAATCCGACGATCATGTGGGTATCGACGTCAACACTGTCAAGTCGTTGACTACCAGGCCTTGGAATGGTAGTATTATCGATGGACAAAACAATGATGTCCGGATCAGTTACAATTCTAGCACAAAAAATCTTAGCGTTGCCTTCACAACTTTTGTGAAGAATGGTGCCAAGGAGATGAGCTATATTAATCACACAGTCGATCTGATGAAGCATGTCTTACCGGATCGGGTCATTGTTGGGTTCTCGGCTTCAACAGGTAACGCTTCTGCTATATTTAGGATCGTCTCGTGGAATTTTACTTCAACTCCTCTGGTTGATGAGAATGCCAGGGACAACACTCCGGTAAGTGTACCTTCTGCTCCTGCGCCTAGCCCTATGGCTAGTTCTGATCCCAACTCCGGCAATAAAGGACTAGTTGTTGGGTTGGGGGTTGGTGCAAGTATTATTCTAGTTGGTGGGTTGGCTTTGGTCTGCTTTATCTTTTGGAAGAAGAAAGAAACGACGGACAGTGATGAAGATCCTATCGTTGGTGATGCCACTGACGATGAATTTGAACAAGGGACCGGTCCCAGAAAGTTTTTGTACGGCGATTTAGTCCGGGCAACTGGTAACTTTCAAGAGGAAGAAAAGCTTGGCCAGGGAGGATTTGGTGGGGTTTATAAGGGATTCATAAAGGACTTGAACTCATATGTAGCTGTGAAGAGGATATCCAAAGGATCTAAACAAGGAGTGAAGGAGTACGCAACAGAAGTAAGGATCATAAGTCGACTTAGGCATCGGAATCTGGTGCAACTCATTGGTTGGTGCCACAAGAAAAAAGAACTCCTGCTTGTTTACGAGTTCATGCCCAACGGCAGTTTAGATTCACATTTGTTCAAACAAAAAAGTTTGTTAACTTGGGAGGCCAGGTACAAAATAGCTAACGGCTTGGCATCGGGGTTGCTTTATCTACACGAAGGATGGGAACAATGCGTTTTGCACAGAGACATCAAATCTAGCAATATCATGTTAGATTCCAATTTCAACGCAAAACTTGGGGATTTTGGGTTAGCTCGGCTTGTGGATCATGGCAAACAATCACAAACAACGGTTTTGGCTGGAACAATGGGCTACATGGCTCCTGAATGTGCTACTACTGGAAAAGCTAGTAAGGAAACAGATGTCTATAGTTTTGGAATCGTTGCTTTGGAGATAGCATGTGGGAGAAAACCGATTGATGTCAATATGGGAAGAGATCAAATCAATATTGTAGAATGGGTTTGGAAGCTATATGGAGAAGGGAGAGTCGTTGAAACAGCCGATCCAAAACTCTGCGGTGATTTTGATGAGAAACAAGTAGAGTGTTTAATCATTGTTGGGTTGTGGTGTGCTCACCCAGACTACGTGATGAGGCCTTCGATACAACAAGCGATTCAAGTACTTAACTTCGAAGTTCCGGTGCCAATTCTTCCATCGAAATTCCCTGTGGCGACCTATTTTGCTTCTGCAGTATCGTTCTCCAAGTTTTCCGACAATAATAGCGGTTCAAGTAGAGGTCAAAGCGAGCCTTCTACCAATGGTTATAGCACATATTCCTCACAGTTCACTACATCTTCTACAACAGACTCTTAA

Protein Analysis

721

Amino Acids

79.25

Weight (kDa)

5.39

Isoelectric Point (pI)

31.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 39 - 295 7.9e-55 Legume lectin domain
Lectin_L-type_dom PF18483 60 - 275 4.5e-12 Legume lectin beta-barrel domain
Pkinase PF00069 390 - 656 6.8e-52 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 392 - 592 1.1e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1215
AatII GACGTC 1 cut(s) 585
Acc65I GGTACC 1 cut(s) 468
AccB1I GGYRCC 5 cut(s) 368, 468, 719, 1359, 1993
AccB7I CCANNNNNTGG 2 cut(s) 239, 615
AccI GTMKAC 1 cut(s) 1321
AccIII TCCGGA 1 cut(s) 654
AciI CCGC 3 cut(s) 482, 1869, 2076
AcoI YGGCCR 1 cut(s) 1189
AcsI RAATTY 4 cut(s) 488, 847, 1103, 2012
AcyI GRCGYC 1 cut(s) 582
AfaI GTAC 6 cut(s) 470, 906, 1139, 1295, 1466, 1974
AfiI CCNNNNNNNGG 7 cut(s) 235, 239, 478, 615, 620, 953, 1082
AgeI ACCGGT 1 cut(s) 1118
AhlI ACTAGT 1 cut(s) 967
AjnI CCWGG 4 cut(s) 608, 881, 1191, 1460
AjuI GAANNNNNNNTTGG 2 cut(s) 1170, 1202
AleI CACNNNNGTG 1 cut(s) 18
Alw21I GWGCWC 1 cut(s) 1927
Alw26I GTCTC 2 cut(s) 844, 1533
AlwNI CAGNNNCTG 1 cut(s) 182
Ama87I CYCGRG 1 cut(s) 130
Aor13HI TCCGGA 1 cut(s) 654
AoxI GGCC 6 cut(s) 384, 448, 611, 1189, 1458, 1946
ApoI RAATTY 4 cut(s) 488, 847, 1103, 2012
ArsI GACNNNNNNTTYG 6 cut(s) 422, 454, 536, 568, 1088, 1120
AseI ATTAAT 1 cut(s) 741
AsiGI ACCGGT 1 cut(s) 1118
Asp718I GGTACC 1 cut(s) 468
AspLEI GCGC 4 cut(s) 221, 343, 400, 922
AspS9I GGNCC 3 cut(s) 408, 1116, 1121
AsuC2I CCSGG 1 cut(s) 1154
AsuHPI GGTGA 7 cut(s) 32, 202, 304, 386, 1097, 1883, 1919
AsuII TTCGAA 2 cut(s) 555, 1983
AvaI CYCGRG 1 cut(s) 130
AvaII GGWCC 3 cut(s) 408, 1116, 1121
BalI TGGCCA 1 cut(s) 1191
BanI GGYRCC 5 cut(s) 368, 468, 719, 1359, 1993
BauI CACGAG 1 cut(s) 841
BbsI GAAGAC 1 cut(s) 231
Bbv12I GWGCWC 1 cut(s) 1927
BccI CCATC 5 cut(s) 371, 527, 629, 1509, 2014
BceAI ACGGC 4 cut(s) 451, 1156, 1423, 1495
BcgI CGANNNNNNTGC 2 cut(s) 422, 456
BciT130I CCWGG 4 cut(s) 610, 883, 1193, 1462
BcnI CCSGG 1 cut(s) 1154
BcoDI GTCTC 2 cut(s) 844, 1533
BcuI ACTAGT 1 cut(s) 967
BfaI CTAG 8 cut(s) 170, 672, 924, 936, 968, 1004, 1551, 1701
BfmI CTRYAG 2 cut(s) 1720, 2040
BfoI RGCGCY 1 cut(s) 401
BmcAI AGTACT 1 cut(s) 1974
Bme1390I CCNGG 5 cut(s) 610, 883, 1154, 1193, 1462
Bme18I GGWCC 3 cut(s) 408, 1116, 1121
BmeT110I CYCGRG 1 cut(s) 130
BmgT120I GGNCC 3 cut(s) 408, 1116, 1121
BmiI GGNNCC 9 cut(s) 370, 409, 470, 721, 1117, 1123, 1361, 1674, 1995
BmrFI CCNGG 5 cut(s) 610, 883, 1154, 1193, 1462
BmsI GCATC 4 cut(s) 340, 1078, 1339, 1496
BpiI GAAGAC 1 cut(s) 231
Bpu14I TTCGAA 2 cut(s) 555, 1983
BpuMI CCSGG 1 cut(s) 1154
Bsa29I ATCGAT 1 cut(s) 633
BsaAI YACGTR 1 cut(s) 1939
BsaBI GATNNNNATC 1 cut(s) 1071
BsaHI GRCGYC 1 cut(s) 582
BsaJI CCNNGG 4 cut(s) 614, 723, 882, 1192
BsaWI WCCGGW 6 cut(s) 17, 654, 775, 895, 1118, 1990
BsaXI ACNNNNNCTCC 4 cut(s) 844, 874, 1448, 1478
Bsc4I CCNNNNNNNGG 7 cut(s) 235, 239, 478, 615, 620, 953, 1082
Bse118I RCCGGY 2 cut(s) 371, 1118
Bse1I ACTGG 4 cut(s) 250, 387, 1165, 1696
Bse8I GATNNNNATC 1 cut(s) 1071
BseAI TCCGGA 1 cut(s) 654
BseBI CCWGG 4 cut(s) 610, 883, 1193, 1462
BseCI ATCGAT 1 cut(s) 633
BseDI CCNNGG 4 cut(s) 614, 723, 882, 1192
BseGI GGATG 2 cut(s) 519, 1520
BseJI GATNNNNATC 1 cut(s) 1071
BseLI CCNNNNNNNGG 7 cut(s) 235, 239, 478, 615, 620, 953, 1082
BseNI ACTGG 4 cut(s) 250, 387, 1165, 1696
BseRI GAGGAG 1 cut(s) 852
BshFI GGCC 6 cut(s) 386, 450, 613, 1191, 1460, 1948
BshNI GGYRCC 5 cut(s) 368, 468, 719, 1359, 1993
BshTI ACCGGT 1 cut(s) 1118
BshVI ATCGAT 1 cut(s) 633
BsiHKAI GWGCWC 1 cut(s) 1927
BsiHKCI CYCGRG 1 cut(s) 130
BsiSI CCGG 9 cut(s) 18, 372, 655, 776, 896, 954, 1119, 1153, 1991
BslFI GGGAC 3 cut(s) 899, 1107, 1129
BslI CCNNNNNNNGG 7 cut(s) 235, 239, 478, 615, 620, 953, 1082
BsmAI GTCTC 2 cut(s) 844, 1533
BsmBI CGTCTC 1 cut(s) 844
BsmFI GGGAC 3 cut(s) 899, 1107, 1129
BsmI GAATGC 1 cut(s) 883
BsnI GGCC 6 cut(s) 386, 450, 613, 1191, 1460, 1948
BsoBI CYCGRG 1 cut(s) 130
Bsp119I TTCGAA 2 cut(s) 555, 1983
Bsp1286I GDGCHC 1 cut(s) 1927
Bsp13I TCCGGA 1 cut(s) 654
BspACI CCGC 3 cut(s) 482, 1869, 2076
BspANI GGCC 6 cut(s) 386, 450, 613, 1191, 1460, 1948
BspDI ATCGAT 1 cut(s) 633
BspEI TCCGGA 1 cut(s) 654
BspLI GGNNCC 9 cut(s) 370, 409, 470, 721, 1117, 1123, 1361, 1674, 1995
BspMAI CTGCAG 1 cut(s) 2044
BspT104I TTCGAA 2 cut(s) 555, 1983
BspT107I GGYRCC 5 cut(s) 368, 468, 719, 1359, 1993
BsrFI RCCGGY 2 cut(s) 371, 1118
BsrI ACTGG 4 cut(s) 250, 387, 1165, 1696
BssAI RCCGGY 2 cut(s) 371, 1118
BssECI CCNNGG 4 cut(s) 614, 723, 882, 1192
BssNI GRCGYC 1 cut(s) 582
BssSI CACGAG 1 cut(s) 841
BssT1I CCWWGG 2 cut(s) 614, 723
Bst2BI CACGAG 1 cut(s) 841
Bst2UI CCWGG 4 cut(s) 610, 883, 1193, 1462
Bst4CI ACNGT 6 cut(s) 75, 592, 751, 1064, 1645, 2136
Bst6I CTCTTC 3 cut(s) 98, 1250, 1780
BstACI GRCGYC 1 cut(s) 582
BstBAI YACGTR 1 cut(s) 1939
BstBI TTCGAA 2 cut(s) 555, 1983
BstC8I GCNNGC 1 cut(s) 2099
BstDEI CTNAG 3 cut(s) 394, 686, 1325
BstF5I GGATG 2 cut(s) 519, 1520
BstH2I RGCGCY 1 cut(s) 401
BstHHI GCGC 4 cut(s) 221, 343, 400, 922
BstMAI GTCTC 2 cut(s) 844, 1533
BstNI CCWGG 4 cut(s) 610, 883, 1193, 1462
BstNSI RCATGY 2 cut(s) 770, 1755
BstSCI CCNGG 5 cut(s) 608, 881, 1152, 1191, 1460
BstSFI CTRYAG 2 cut(s) 1720, 2040
BstV2I GAAGAC 1 cut(s) 231
BstX2I RGATCY 2 cut(s) 1072, 1271
BstYI RGATCY 2 cut(s) 1072, 1271
Bsu15I ATCGAT 1 cut(s) 633
BsuRI GGCC 6 cut(s) 386, 450, 613, 1191, 1460, 1948
BsuTUI ATCGAT 1 cut(s) 633
BtsCI GGATG 2 cut(s) 519, 1520
BtsIMutI CAGTG 3 cut(s) 588, 1069, 1092
Cac8I GCNNGC 1 cut(s) 2099
CaiI CAGNNNCTG 1 cut(s) 182
CfoI GCGC 4 cut(s) 221, 343, 400, 922
Cfr10I RCCGGY 2 cut(s) 371, 1118
Cfr13I GGNCC 3 cut(s) 408, 1116, 1121
ClaI ATCGAT 1 cut(s) 633
Csp6I GTAC 6 cut(s) 469, 905, 1138, 1294, 1465, 1973
CspAI ACCGGT 1 cut(s) 1118
CviAII CATG 9 cut(s) 25, 363, 569, 767, 1399, 1561, 1622, 1669, 1752
CviQI GTAC 6 cut(s) 469, 905, 1138, 1294, 1465, 1973
DdeI CTNAG 3 cut(s) 394, 686, 1325
EaeI YGGCCR 1 cut(s) 1189
Eam1104I CTCTTC 3 cut(s) 98, 1250, 1780
EarI CTCTTC 3 cut(s) 98, 1250, 1780
Eco130I CCWWGG 2 cut(s) 614, 723
Eco147I AGGCCT 2 cut(s) 613, 1948
Eco32I GATATC 2 cut(s) 496, 1263
Eco47I GGWCC 3 cut(s) 408, 1116, 1121
Eco88I CYCGRG 1 cut(s) 130
EcoRII CCWGG 4 cut(s) 608, 881, 1191, 1460
EcoRV GATATC 2 cut(s) 496, 1263
EcoT14I CCWWGG 2 cut(s) 614, 723
ErhI CCWWGG 2 cut(s) 614, 723
Esp3I CGTCTC 1 cut(s) 844
FaeI CATG 9 cut(s) 28, 366, 572, 770, 1402, 1564, 1625, 1672, 1755
FaqI GGGAC 3 cut(s) 899, 1107, 1129
FatI CATG 9 cut(s) 24, 362, 568, 766, 1398, 1560, 1621, 1668, 1751
FauNDI CATATG 1 cut(s) 1243
FblI GTMKAC 1 cut(s) 1321
FokI GGATG 2 cut(s) 506, 1527
FspBI CTAG 8 cut(s) 170, 672, 924, 936, 968, 1004, 1551, 1701
GlaI GCGC 4 cut(s) 220, 342, 399, 921
HaeII RGCGCY 1 cut(s) 401
HaeIII GGCC 6 cut(s) 386, 450, 613, 1191, 1460, 1948
HapII CCGG 9 cut(s) 18, 372, 655, 776, 896, 954, 1119, 1153, 1991
HhaI GCGC 4 cut(s) 221, 343, 400, 922
Hin1I GRCGYC 1 cut(s) 582
Hin1II CATG 9 cut(s) 28, 366, 572, 770, 1402, 1564, 1625, 1672, 1755
Hin6I GCGC 4 cut(s) 219, 341, 398, 920
HinP1I GCGC 4 cut(s) 219, 341, 398, 920
HincII GTYRAC 5 cut(s) 511, 586, 603, 1322, 1449
HindII GTYRAC 5 cut(s) 511, 586, 603, 1322, 1449
HindIII AAGCTT 2 cut(s) 118, 1184
HpaI GTTAAC 1 cut(s) 1449
HpaII CCGG 9 cut(s) 18, 372, 655, 776, 896, 954, 1119, 1153, 1991
HphI GGTGA 7 cut(s) 32, 202, 304, 386, 1097, 1883, 1919
Hpy166II GTNNAC 8 cut(s) 511, 586, 603, 905, 1322, 1390, 1449, 2139
Hpy188I TCNGA 7 cut(s) 281, 412, 562, 759, 943, 1335, 2065
Hpy188III TCNNGA 8 cut(s) 42, 82, 130, 143, 170, 655, 1172, 1676
Hpy8I GTNNAC 8 cut(s) 511, 586, 603, 905, 1322, 1390, 1449, 2139
Hpy99I CGWCG 6 cut(s) 434, 437, 548, 566, 584, 1060
HpyCH4III ACNGT 6 cut(s) 75, 592, 751, 1064, 1645, 2136
HpyCH4IV ACGT 3 cut(s) 507, 582, 1938
HpyCH4V TGCA 7 cut(s) 65, 107, 290, 992, 1345, 1534, 2042
HpyF3I CTNAG 3 cut(s) 394, 686, 1325
HpySE526I ACGT 3 cut(s) 507, 582, 1938
Hsp92I GRCGYC 1 cut(s) 582
Hsp92II CATG 9 cut(s) 28, 366, 572, 770, 1402, 1564, 1625, 1672, 1755
HspAI GCGC 4 cut(s) 219, 341, 398, 920
Kpn2I TCCGGA 1 cut(s) 654
KpnI GGTACC 1 cut(s) 472
KspAI GTTAAC 1 cut(s) 1449
LmnI GCTCC 3 cut(s) 282, 919, 1678
LweI GCATC 4 cut(s) 340, 1078, 1339, 1496
MaeI CTAG 8 cut(s) 170, 672, 924, 936, 968, 1004, 1551, 1701
MaeII ACGT 3 cut(s) 507, 582, 1938
MaeIII GTNAC 4 cut(s) 20, 662, 812, 1163
MflI RGATCY 2 cut(s) 1072, 1271
MhlI GDGCHC 1 cut(s) 1927
MlsI TGGCCA 1 cut(s) 1191
MluCI AATT 9 cut(s) 124, 355, 488, 667, 847, 1103, 1573, 1998, 2012
MluNI TGGCCA 1 cut(s) 1191
MlyI GAGTC 2 cut(s) 1848, 2153
MmeI TCCRAC 3 cut(s) 304, 585, 2088
Mox20I TGGCCA 1 cut(s) 1191
MroI TCCGGA 1 cut(s) 654
MscI TGGCCA 1 cut(s) 1191
MslI CAYNNNNRTG 1 cut(s) 18
Msp20I TGGCCA 1 cut(s) 1191
MspI CCGG 9 cut(s) 18, 372, 655, 776, 896, 954, 1119, 1153, 1991
MspR9I CCNGG 5 cut(s) 610, 883, 1154, 1193, 1462
Mva1269I GAATGC 1 cut(s) 883
MvaI CCWGG 4 cut(s) 610, 883, 1193, 1462
NciI CCSGG 1 cut(s) 1154
NdeI CATATG 1 cut(s) 1243
NlaIII CATG 9 cut(s) 28, 366, 572, 770, 1402, 1564, 1625, 1672, 1755
NlaIV GGNNCC 9 cut(s) 370, 409, 470, 721, 1117, 1123, 1361, 1674, 1995
NmeAIII GCCGAG 3 cut(s) 426, 779, 1588
NmuCI GTSAC 1 cut(s) 20
NspI RCATGY 2 cut(s) 770, 1755
NspV TTCGAA 2 cut(s) 555, 1983
OliI CACNNNNGTG 1 cut(s) 18
PceI AGGCCT 2 cut(s) 613, 1948
PcsI WCGNNNNNNNCGW 2 cut(s) 552, 561
PctI GAATGC 1 cut(s) 883
PflMI CCANNNNNTGG 2 cut(s) 239, 615
PinAI ACCGGT 1 cut(s) 1118
PleI GAGTC 2 cut(s) 1847, 2153
PpsI GAGTC 2 cut(s) 1847, 2153
Ppu21I YACGTR 1 cut(s) 1939
PshBI ATTAAT 1 cut(s) 741
PsiI TTATAA 1 cut(s) 1215
Psp6I CCWGG 4 cut(s) 608, 881, 1191, 1460
PspGI CCWGG 4 cut(s) 608, 881, 1191, 1460
PspN4I GGNNCC 9 cut(s) 370, 409, 470, 721, 1117, 1123, 1361, 1674, 1995
PspPI GGNCC 3 cut(s) 408, 1116, 1121
PstI CTGCAG 1 cut(s) 2044
PstNI CAGNNNCTG 1 cut(s) 182
PsuI RGATCY 2 cut(s) 1072, 1271
RsaI GTAC 6 cut(s) 470, 906, 1139, 1295, 1466, 1974
RsaNI GTAC 6 cut(s) 469, 905, 1138, 1294, 1465, 1973
RseI CAYNNNNRTG 1 cut(s) 18
SalI GTCGAC 1 cut(s) 1320
Sau96I GGNCC 3 cut(s) 408, 1116, 1121
ScaI AGTACT 1 cut(s) 1974
SchI GAGTC 2 cut(s) 1848, 2153
ScrFI CCNGG 5 cut(s) 610, 883, 1154, 1193, 1462
SduI GDGCHC 1 cut(s) 1927
SfaNI GCATC 4 cut(s) 340, 1078, 1339, 1496
SfcI CTRYAG 2 cut(s) 1720, 2040
SfuI TTCGAA 2 cut(s) 555, 1983
SinI GGWCC 3 cut(s) 408, 1116, 1121
SmiMI CAYNNNNRTG 1 cut(s) 18
SpeI ACTAGT 1 cut(s) 967
Sse9I AATT 9 cut(s) 124, 355, 488, 667, 847, 1103, 1573, 1998, 2012
SseBI AGGCCT 2 cut(s) 613, 1948
SsiI CCGC 3 cut(s) 482, 1869, 2076
SspI AATATT 1 cut(s) 1801
SspMI CTAG 8 cut(s) 170, 672, 924, 936, 968, 1004, 1551, 1701
StuI AGGCCT 2 cut(s) 613, 1948
StyD4I CCNGG 5 cut(s) 608, 881, 1152, 1191, 1460
StyI CCWWGG 2 cut(s) 614, 723
TaaI ACNGT 6 cut(s) 75, 592, 751, 1064, 1645, 2136
TaiI ACGT 3 cut(s) 510, 585, 1941
TasI AATT 9 cut(s) 124, 355, 488, 667, 847, 1103, 1573, 1998, 2012
TatI WGTACW 1 cut(s) 1972
TscAI CASTG 3 cut(s) 595, 1069, 1099
TseFI GTSAC 1 cut(s) 20
Tsp45I GTSAC 1 cut(s) 20
TspDTI ATGAA 6 cut(s) 549, 776, 1083, 1116, 1213, 1387
TspGWI ACGGA 2 cut(s) 210, 1073
TspRI CASTG 3 cut(s) 595, 1069, 1099
Van91I CCANNNNNTGG 2 cut(s) 239, 615
VpaK11BI GGWCC 3 cut(s) 408, 1116, 1121
VspI ATTAAT 1 cut(s) 741
XapI RAATTY 4 cut(s) 488, 847, 1103, 2012
XbaI TCTAGA 1 cut(s) 169
XceI RCATGY 2 cut(s) 770, 1755
XcmI CCANNNNNNNNNTGG 2 cut(s) 236, 1199
XmiI GTMKAC 1 cut(s) 1321
XspI CTAG 8 cut(s) 170, 672, 924, 936, 968, 1004, 1551, 1701
ZraI GACGTC 1 cut(s) 583
ZrmI AGTACT 1 cut(s) 1974
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.