Rroxscaffold_2G00135630

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
73212690 .. 73214254
1565 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00135630.1

Sequence Viewer

Length: 1461 bp
ATGGAACTCAACACAGCAGATTATTTCCGTGTTGGCCGGGCAACCTATGCAGAGCCGTTGCACTTGTGGGAGGGGTCGTCACTTGCTTCGGACTTCACTACTAACTTCTCCTTCGTTGTGGACACTCTTAACAAAAGCAGCTTTGCTGATGGGTTTGCCATCTTCCTCGCTCCGGTCCACTATCCCATTCCACCTAACTCCGGCAGTTGTGATCTAGGCTTGTTCAACACCACCACTCGTTTTGCAGCCTCCCAAAACCAGCTTGTGGCGGTTGAGTTCGACACTTTGTCCAACCCCTGGGATCCACAGGGGCCGCACATTGGGATCAACGACAAGACCATCTCCTCAGGGCCGCACATTGGGATCAACGACAAGACTCTCCTCAGCTGGGATCCTGTCCTCCACAGTGGGAAAGATTGTCATGCACAGATAACATACAATGCTACCACCAACCACCTCATTTTGTCTTGGGCATACGAAAAAAGTTTGGCGCCGAATAATTCTTCCCTTTCCATTACTATTGACCTGAGAAAGTCTCTCCCGGAGTGGGTTACAATTGGATTTTCATCTGCTACAGGCCTTGTTTTTGAGCGGCACGTTATAAGTTCATGGGAATTCAGTAGTTCAGAGTTGAACTCCGATGCGAACCAAAGGAAGAATAAAAAGGAGAGGAGGATAGTCTTGAAGATTGTGGTCGCTGCAGCAGCAGCAGTTCTTTTCTTGATTTTGATGCTTTATGTGGCCTACCGGTGGGTCGTACGGCAGCGGATAAAGAGGACTCGTGGAGATAGAATTGAGTCGAATGAATCCTCCAGTGTTGCATTGTCCTCCATAAATCCAAGACAATTTACTTATCAAGAACTGGTTGCAGCCACCAATGGCTTCGCAAACGATAGAAGGCTAGGCCAGGGAGGATCAGGACAAGTTTATAAAGGGATCATTCAAGATCTAGGATGTGTAGCTGCTGTGAAGAGAATCTTTGCACAATCCGACAAGCACTATGAGAAGATCTTCATCAACGAAGTCAAAATCATAAGCCGCATTATACATAAAAACTTGGTGCACTTCGTTGGATGGTGTCATGCGCAAGGCGAATGCATGCTTGTTTATGAATACATGCCTAACAGTAGCCTTGACACGCATCTATTTGGCTCTAGAGCAACCTTGCAGTGGGAGTTTAGGAATAGAATAGCTTTAGGCTTGGCCTCGGCGCTTCATTATCTACACGAGGATGCAGAGCAGTGTGTCCTTCATAGGGATATCAAATCAGCTAATGTTCTGCTGGACAACGATTTCAACACTAAACTTGGTGATTTTGGGATTGCTAAGCTCGTGGATCTGCGGCTAAGGTCTCAGACTACAGGGGTAGTCGGGACTTTTGGATACATGGCTCCAGAATATGTTATTCAAGGGAGGGCAAGCAAAGAATCAGACATGTTTAGCTTCGGAGTTGTGGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

486

Amino Acids

54.2

Weight (kDa)

7.27

Isoelectric Point (pI)

37.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 3 - 220 2.1e-53 Legume lectin domain
Pkinase PF00069 296 - 485 3.8e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 298 - 485 3.2e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 602, 930
Acc16I TGCGCA 1 cut(s) 1086
AccB1I GGYRCC 1 cut(s) 490
AccB7I CCANNNNNTGG 2 cut(s) 265, 297
AccBSI CCGCTC 1 cut(s) 592
AciI CCGC 7 cut(s) 269, 314, 353, 592, 766, 1039, 1342
AclWI GGATC 9 cut(s) 296, 309, 332, 371, 386, 399, 922, 944, 1344
AcoI YGGCCR 1 cut(s) 34
AcsI RAATTY 1 cut(s) 614
AcyI GRCGYC 1 cut(s) 491
AfaI GTAC 1 cut(s) 759
AflIII ACRYGT 1 cut(s) 1434
AgeI ACCGGT 1 cut(s) 747
AgsI TTSAA 6 cut(s) 226, 634, 685, 944, 1297, 1409
AhdI GACNNNNNGTC 1 cut(s) 286
AjnI CCWGG 2 cut(s) 296, 906
AluBI AGCT 8 cut(s) 141, 262, 387, 962, 1193, 1271, 1330, 1443
AluI AGCT 8 cut(s) 141, 262, 387, 962, 1193, 1271, 1330, 1443
Alw21I GWGCWC 1 cut(s) 1065
Alw26I GTCTC 2 cut(s) 540, 1356
Alw44I GTGCAC 1 cut(s) 1061
AlwI GGATC 9 cut(s) 296, 309, 332, 371, 386, 399, 922, 944, 1344
AoxI GGCC 8 cut(s) 34, 311, 350, 577, 741, 904, 1203, 1455
ApaLI GTGCAC 1 cut(s) 1061
ApeKI GCWGC 9 cut(s) 138, 245, 698, 701, 704, 707, 763, 869, 962
ApoI RAATTY 1 cut(s) 614
AsiGI ACCGGT 1 cut(s) 747
Asp700I GAANNNNTTC 1 cut(s) 1010
AspLEI GCGC 3 cut(s) 493, 1087, 1213
AspS9I GGNCC 3 cut(s) 175, 311, 350
AsuC2I CCSGG 2 cut(s) 38, 542
AsuHPI GGTGA 1 cut(s) 1322
AvaII GGWCC 1 cut(s) 175
AxyI CCTNAGG 1 cut(s) 346
BaeGI GKGCMC 1 cut(s) 1065
BamHI GGATCC 2 cut(s) 301, 391
BanI GGYRCC 1 cut(s) 490
BauI CACGAG 3 cut(s) 780, 1226, 1331
Bbv12I GWGCWC 1 cut(s) 1065
BbvCI CCTCAGC 1 cut(s) 383
BbvI GCAGC 9 cut(s) 150, 257, 685, 713, 716, 719, 775, 881, 949
BccI CCATC 4 cut(s) 143, 167, 347, 1068
BceAI ACGGC 2 cut(s) 40, 776
BciT130I CCWGG 2 cut(s) 298, 908
BciVI GTATCC 1 cut(s) 1376
BcnI CCSGG 2 cut(s) 38, 542
BcoDI GTCTC 2 cut(s) 540, 1356
BfaI CTAG 5 cut(s) 215, 902, 950, 1155, 1459
BfmI CTRYAG 3 cut(s) 573, 699, 1359
BfoI RGCGCY 2 cut(s) 494, 1214
BfuI GTATCC 1 cut(s) 1376
BglII AGATCT 2 cut(s) 946, 1008
BlpI GCTNAGC 1 cut(s) 1326
Bme1390I CCNGG 4 cut(s) 38, 298, 542, 908
Bme18I GGWCC 1 cut(s) 175
BmeRI GACNNNNNGTC 1 cut(s) 286
BmgT120I GGNCC 3 cut(s) 175, 311, 350
BmiI GGNNCC 5 cut(s) 303, 312, 393, 492, 1392
BmrFI CCNGG 4 cut(s) 38, 298, 542, 908
BmsI GCATC 4 cut(s) 631, 720, 1150, 1222
BplI GAGNNNNNCTC 4 cut(s) 520, 552, 620, 652
BpmI CTGGAG 2 cut(s) 796, 1377
Bpu10I CCTNAGC 2 cut(s) 383, 1346
Bpu1102I GCTNAGC 1 cut(s) 1326
BpuMI CCSGG 2 cut(s) 38, 542
BsaBI GATNNNNATC 2 cut(s) 565, 1013
BsaHI GRCGYC 1 cut(s) 491
BsaI GGTCTC 1 cut(s) 1356
BsaJI CCNNGG 4 cut(s) 296, 297, 907, 1206
BsaWI WCCGGW 2 cut(s) 172, 747
BsaXI ACNNNNNCTCC 2 cut(s) 62, 92
Bse118I RCCGGY 1 cut(s) 747
Bse1I ACTGG 2 cut(s) 813, 867
Bse21I CCTNAGG 1 cut(s) 346
Bse8I GATNNNNATC 2 cut(s) 565, 1013
BseBI CCWGG 2 cut(s) 298, 908
BseDI CCNNGG 4 cut(s) 296, 297, 907, 1206
BseGI GGATG 3 cut(s) 959, 1079, 1237
BseJI GATNNNNATC 2 cut(s) 565, 1013
BseMII CTCAG 4 cut(s) 360, 397, 518, 1367
BseNI ACTGG 2 cut(s) 813, 867
BseRI GAGGAG 3 cut(s) 334, 371, 685
BseSI GKGCMC 1 cut(s) 1065
BseXI GCAGC 9 cut(s) 150, 257, 685, 713, 716, 719, 775, 881, 949
BseYI CCCAGC 1 cut(s) 387
BshFI GGCC 8 cut(s) 36, 313, 352, 579, 743, 906, 1205, 1457
BshNI GGYRCC 1 cut(s) 490
BshTI ACCGGT 1 cut(s) 747
BsiHKAI GWGCWC 1 cut(s) 1065
BsiSI CCGG 5 cut(s) 37, 173, 201, 542, 748
BsiWI CGTACG 1 cut(s) 757
BslFI GGGAC 1 cut(s) 1387
BsmAI GTCTC 2 cut(s) 540, 1356
BsmFI GGGAC 1 cut(s) 1387
BsmI GAATGC 1 cut(s) 1100
BsnI GGCC 8 cut(s) 36, 313, 352, 579, 743, 906, 1205, 1457
Bso31I GGTCTC 1 cut(s) 1356
Bsp1286I GDGCHC 1 cut(s) 1065
Bsp1720I GCTNAGC 1 cut(s) 1326
BspACI CCGC 7 cut(s) 269, 314, 353, 592, 766, 1039, 1342
BspANI GGCC 8 cut(s) 36, 313, 352, 579, 743, 906, 1205, 1457
BspCNI CTCAG 4 cut(s) 359, 396, 519, 1366
BspLI GGNNCC 5 cut(s) 303, 312, 393, 492, 1392
BspMAI CTGCAG 1 cut(s) 703
BspPI GGATC 9 cut(s) 296, 309, 332, 371, 386, 399, 922, 944, 1344
BspT107I GGYRCC 1 cut(s) 490
BspTNI GGTCTC 1 cut(s) 1356
BsrBI CCGCTC 1 cut(s) 592
BsrFI RCCGGY 1 cut(s) 747
BsrI ACTGG 2 cut(s) 813, 867
BssAI RCCGGY 1 cut(s) 747
BssECI CCNNGG 4 cut(s) 296, 297, 907, 1206
BssNI GRCGYC 1 cut(s) 491
BssSI CACGAG 3 cut(s) 780, 1226, 1331
Bst2BI CACGAG 3 cut(s) 780, 1226, 1331
Bst2UI CCWGG 2 cut(s) 298, 908
Bst4CI ACNGT 2 cut(s) 407, 1127
Bst6I CTCTTC 1 cut(s) 965
BstACI GRCGYC 1 cut(s) 491
BstAPI GCANNNNNTGC 1 cut(s) 47
BstC8I GCNNGC 2 cut(s) 1100, 1420
BstDEI CTNAG 6 cut(s) 346, 383, 527, 1326, 1346, 1353
BstF5I GGATG 3 cut(s) 959, 1079, 1237
BstH2I RGCGCY 2 cut(s) 494, 1214
BstHHI GCGC 3 cut(s) 493, 1087, 1213
BstMAI GTCTC 2 cut(s) 540, 1356
BstMWI GCNNNNNNNGC 3 cut(s) 47, 704, 707
BstNI CCWGG 2 cut(s) 298, 908
BstNSI RCATGY 3 cut(s) 1102, 1120, 1438
BstSCI CCNGG 4 cut(s) 36, 296, 540, 906
BstSFI CTRYAG 3 cut(s) 573, 699, 1359
BstSLI GKGCMC 1 cut(s) 1065
BstV1I GCAGC 9 cut(s) 150, 257, 685, 713, 716, 719, 775, 881, 949
BstX2I RGATCY 5 cut(s) 301, 391, 946, 1008, 1336
BstYI RGATCY 5 cut(s) 301, 391, 946, 1008, 1336
Bsu36I CCTNAGG 1 cut(s) 346
BsuI GTATCC 1 cut(s) 1376
BsuRI GGCC 8 cut(s) 36, 313, 352, 579, 743, 906, 1205, 1457
BtsCI GGATG 3 cut(s) 959, 1079, 1237
BtsI GCAGTG 2 cut(s) 1175, 1247
BtsIMutI CAGTG 4 cut(s) 412, 820, 1175, 1247
Cac8I GCNNGC 2 cut(s) 1100, 1420
CfoI GCGC 3 cut(s) 493, 1087, 1213
Cfr10I RCCGGY 1 cut(s) 747
Cfr13I GGNCC 3 cut(s) 175, 311, 350
Csp6I GTAC 1 cut(s) 758
CspAI ACCGGT 1 cut(s) 747
CspCI CAANNNNNGTGG 2 cut(s) 223, 258
CviAII CATG 7 cut(s) 422, 609, 1082, 1099, 1117, 1387, 1435
CviQI GTAC 1 cut(s) 758
DdeI CTNAG 6 cut(s) 346, 383, 527, 1326, 1346, 1353
DinI GGCGCC 1 cut(s) 492
DriI GACNNNNNGTC 1 cut(s) 286
EaeI YGGCCR 1 cut(s) 34
Eam1104I CTCTTC 1 cut(s) 965
Eam1105I GACNNNNNGTC 1 cut(s) 286
EarI CTCTTC 1 cut(s) 965
Eco147I AGGCCT 1 cut(s) 579
Eco31I GGTCTC 1 cut(s) 1356
Eco32I GATATC 1 cut(s) 1261
Eco47I GGWCC 1 cut(s) 175
Eco81I CCTNAGG 1 cut(s) 346
EcoRI GAATTC 1 cut(s) 614
EcoRII CCWGG 2 cut(s) 296, 906
EcoRV GATATC 1 cut(s) 1261
EcoT22I ATGCAT 1 cut(s) 1100
EgeI GGCGCC 1 cut(s) 492
EheI GGCGCC 1 cut(s) 492
FaeI CATG 7 cut(s) 425, 612, 1085, 1102, 1120, 1390, 1438
FalI AAGNNNNNCTT 2 cut(s) 962, 994
FaqI GGGAC 1 cut(s) 1387
FatI CATG 7 cut(s) 421, 608, 1081, 1098, 1116, 1386, 1434
FokI GGATG 3 cut(s) 966, 1086, 1244
FspBI CTAG 5 cut(s) 215, 902, 950, 1155, 1459
FspI TGCGCA 1 cut(s) 1086
GlaI GCGC 3 cut(s) 492, 1086, 1212
GsaI CCCAGC 1 cut(s) 391
GsuI CTGGAG 2 cut(s) 796, 1377
HaeII RGCGCY 2 cut(s) 494, 1214
HaeIII GGCC 8 cut(s) 36, 313, 352, 579, 743, 906, 1205, 1457
HapII CCGG 5 cut(s) 37, 173, 201, 542, 748
HhaI GCGC 3 cut(s) 493, 1087, 1213
Hin1I GRCGYC 1 cut(s) 491
Hin1II CATG 7 cut(s) 425, 612, 1085, 1102, 1120, 1390, 1438
Hin6I GCGC 3 cut(s) 491, 1085, 1211
HinP1I GCGC 3 cut(s) 491, 1085, 1211
HinfI GANTC 6 cut(s) 376, 778, 797, 806, 975, 1427
HpaII CCGG 5 cut(s) 37, 173, 201, 542, 748
HphI GGTGA 1 cut(s) 1322
Hpy166II GTNNAC 3 cut(s) 121, 178, 1063
Hpy188I TCNGA 7 cut(s) 91, 628, 640, 991, 1356, 1432, 1448
Hpy188III TCNNGA 8 cut(s) 682, 721, 857, 918, 944, 1155, 1372, 1394
Hpy8I GTNNAC 3 cut(s) 121, 178, 1063
HpyAV CCTTC 3 cut(s) 121, 891, 1259
HpyCH4III ACNGT 2 cut(s) 407, 1127
HpyCH4IV ACGT 1 cut(s) 597
HpyF10VI GCNNNNNNNGC 3 cut(s) 47, 704, 707
HpyF3I CTNAG 6 cut(s) 346, 383, 527, 1326, 1346, 1353
HpySE526I ACGT 1 cut(s) 597
Hsp92I GRCGYC 1 cut(s) 491
Hsp92II CATG 7 cut(s) 425, 612, 1085, 1102, 1120, 1390, 1438
HspAI GCGC 3 cut(s) 491, 1085, 1211
KasI GGCGCC 1 cut(s) 490
LmnI GCTCC 2 cut(s) 175, 1396
Lsp1109I GCAGC 9 cut(s) 150, 257, 685, 713, 716, 719, 775, 881, 949
LweI GCATC 4 cut(s) 631, 720, 1150, 1222
MaeI CTAG 5 cut(s) 215, 902, 950, 1155, 1459
MaeII ACGT 1 cut(s) 597
MaeIII GTNAC 2 cut(s) 78, 550
MbiI CCGCTC 1 cut(s) 592
MboII GAAGA 7 cut(s) 154, 495, 667, 697, 982, 1003, 1018
MfeI CAATTG 1 cut(s) 555
MflI RGATCY 5 cut(s) 301, 391, 946, 1008, 1336
MhlI GDGCHC 1 cut(s) 1065
MluCI AATT 5 cut(s) 499, 555, 614, 792, 845
Mly113I GGCGCC 1 cut(s) 491
MlyI GAGTC 3 cut(s) 370, 772, 806
MmeI TCCRAC 3 cut(s) 315, 1014, 1051
Mph1103I ATGCAT 1 cut(s) 1100
MroXI GAANNNNTTC 1 cut(s) 1010
MseI TTAA 1 cut(s) 129
MslI CAYNNNNRTG 1 cut(s) 1230
MspA1I CMGCKG 2 cut(s) 387, 766
MspI CCGG 5 cut(s) 37, 173, 201, 542, 748
MspR9I CCNGG 4 cut(s) 38, 298, 542, 908
MunI CAATTG 1 cut(s) 555
Mva1269I GAATGC 1 cut(s) 1100
MvaI CCWGG 2 cut(s) 298, 908
MwoI GCNNNNNNNGC 3 cut(s) 47, 704, 707
NarI GGCGCC 1 cut(s) 491
NciI CCSGG 2 cut(s) 38, 542
NlaIII CATG 7 cut(s) 425, 612, 1085, 1102, 1120, 1390, 1438
NlaIV GGNNCC 5 cut(s) 303, 312, 393, 492, 1392
NmeAIII GCCGAG 1 cut(s) 1187
NmuCI GTSAC 1 cut(s) 78
NsbI TGCGCA 1 cut(s) 1086
NsiI ATGCAT 1 cut(s) 1100
NspI RCATGY 3 cut(s) 1102, 1120, 1438
PaeI GCATGC 1 cut(s) 1102
PasI CCCWGGG 1 cut(s) 297
PceI AGGCCT 1 cut(s) 579
PciI ACATGT 1 cut(s) 1434
PctI GAATGC 1 cut(s) 1100
PdmI GAANNNNTTC 1 cut(s) 1010
PfeI GAWTC 3 cut(s) 806, 975, 1427
Pfl23II CGTACG 1 cut(s) 757
PflMI CCANNNNNTGG 2 cut(s) 265, 297
PfoI TCCNGGA 1 cut(s) 540
PinAI ACCGGT 1 cut(s) 747
PleI GAGTC 3 cut(s) 370, 772, 805
PluTI GGCGCC 1 cut(s) 494
PpsI GAGTC 3 cut(s) 370, 772, 805
PscI ACATGT 1 cut(s) 1434
PsiI TTATAA 2 cut(s) 602, 930
Psp6I CCWGG 2 cut(s) 296, 906
PspFI CCCAGC 1 cut(s) 387
PspGI CCWGG 2 cut(s) 296, 906
PspLI CGTACG 1 cut(s) 757
PspN4I GGNNCC 5 cut(s) 303, 312, 393, 492, 1392
PspPI GGNCC 3 cut(s) 175, 311, 350
PstI CTGCAG 1 cut(s) 703
PsuI RGATCY 5 cut(s) 301, 391, 946, 1008, 1336
PvuII CAGCTG 1 cut(s) 387
RsaI GTAC 1 cut(s) 759
RsaNI GTAC 1 cut(s) 758
RseI CAYNNNNRTG 1 cut(s) 1230
SaqAI TTAA 1 cut(s) 129
Sau96I GGNCC 3 cut(s) 175, 311, 350
SchI GAGTC 3 cut(s) 370, 772, 806
ScrFI CCNGG 4 cut(s) 38, 298, 542, 908
SduI GDGCHC 1 cut(s) 1065
SfaNI GCATC 4 cut(s) 631, 720, 1150, 1222
SfcI CTRYAG 3 cut(s) 573, 699, 1359
SfoI GGCGCC 1 cut(s) 492
SinI GGWCC 1 cut(s) 175
SmiMI CAYNNNNRTG 1 cut(s) 1230
SphI GCATGC 1 cut(s) 1102
Sse9I AATT 5 cut(s) 499, 555, 614, 792, 845
SseBI AGGCCT 1 cut(s) 579
SsiI CCGC 7 cut(s) 269, 314, 353, 592, 766, 1039, 1342
SspDI GGCGCC 1 cut(s) 490
SspMI CTAG 5 cut(s) 215, 902, 950, 1155, 1459
StuI AGGCCT 1 cut(s) 579
StyD4I CCNGG 4 cut(s) 36, 296, 540, 906
TaaI ACNGT 2 cut(s) 407, 1127
TaiI ACGT 1 cut(s) 600
TaqI TCGA 2 cut(s) 279, 800
TasI AATT 5 cut(s) 499, 555, 614, 792, 845
TauI GCSGC 5 cut(s) 316, 355, 595, 1041, 1345
TfiI GAWTC 3 cut(s) 806, 975, 1427
Tru1I TTAA 1 cut(s) 129
Tru9I TTAA 1 cut(s) 129
TscAI CASTG 4 cut(s) 412, 820, 1175, 1247
TseFI GTSAC 1 cut(s) 78
TseI GCWGC 9 cut(s) 138, 245, 698, 701, 704, 707, 763, 869, 962
Tsp45I GTSAC 1 cut(s) 78
TspDTI ATGAA 7 cut(s) 555, 597, 819, 1003, 1125, 1205, 1241
TspGWI ACGGA 1 cut(s) 17
TspRI CASTG 4 cut(s) 412, 820, 1175, 1247
Van91I CCANNNNNTGG 2 cut(s) 265, 297
VneI GTGCAC 1 cut(s) 1061
VpaK11BI GGWCC 1 cut(s) 175
XapI RAATTY 1 cut(s) 614
XbaI TCTAGA 1 cut(s) 1154
XceI RCATGY 3 cut(s) 1102, 1120, 1438
XmnI GAANNNNTTC 1 cut(s) 1010
XspI CTAG 5 cut(s) 215, 902, 950, 1155, 1459
Zsp2I ATGCAT 1 cut(s) 1100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.