MD03G1234100.v1.1

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Reverse (-)
31973598 .. 31975844
2247 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1234100.v1.1.491

Sequence Viewer

Length: 2247 bp
ATGGCTGCCCATGATTTGGCTATCATCGCACTCCTCTCACCGAAGCTTGATCATCACTTCCTTGTTATTCTCCTGCTGCTGTTAATCCCTTGTGCAGCTCCGTTTTCTTTTGAATTTCCCACTTTCCGACGAAGTGATCACACCAACAGTACGGAAGAGTTGAAAAAATTAGTTACCGAGGGAGATGCTGTTATCGGCAACCAATCCATTTGCCTCACTGAAGGCAGCCTGGGTGTGGAAACAAATAAAGCTAATGGAAGTGTTGGCCGTGCTACCTACAGCGAACCCTTCCTGCTCCGGGACAATAATACAGGAAAACTTGCTGATTTCAGCACAAGTTTCACGTTCATGATTGATACGAAAAACAGTACCACCCCCTCCTATGTCGAGGGGCTGGCCTTCTTCTTAGCGCCAAATGGATCCTTACTCAACCGAGCACTTGGAGTAGGTAGCAGTATGGGCCTTGCTGTCAACAGCTCCGTGGAAAATGTTACTGAGCCAAGAAATGAGTACCCGTTTGTGGCAGTGGAGTTTCATATGCACAGGCCAACTGTGGAGGATCCAGACGGCGGTCGTGTGGGGATTGACATCAACTCTGTCAAGTCTAATATTACCAGGCCCTGGAATAGTGGAATTCTGGAAGGAAAACTTAGTCGTGCTTGGATTCGTTATAATTCAAGCTCGAAAAATCTTAGTGTTTCCTTCACCACTTATGCCAATGATACCCACGAGCAAGTAGTTGGTTCTCTCATTTACATGGTTGATCTGAATAAATACTTGCCGGATTGGGTCATCGTTGGCTTTTCTGCTTCAACAGGTGCTTCTTCTGCTCTGCACATCACCTCGTGGAATTTCACTTCTACTCTGATTGATGATGAATCTCTAGCTCTTTCGGGCGAACAAAAAAAGCAAGAATCTCCAGTTCCGACCCCAGGCCGTAGTTCTAAAGCCAAGTCAAGAAAACGCAAGAAATCTCTGGCGGTGATTATCGGTAGTACTACTGGTGGTGGTGGATTCATCTTGATTTGTGTCGTAGGTTTGGGTGTGTTCAACTCGTGCAAGAAAAGAATAGTGAGAGAAAGGACTGATACAAAGCTTATGAGTCCTCATGACTCAGTTGACCAGTTACAGAAGGTGATTGGCGGCCCCAGGCAGTTTTCGTACAGCGAATTGGCTTCCGCGACAGGACATTTTAGTGAGAGAGAAAAGCTTGGAGACGGAAACTTTGGGGTGGTTTACAAGGGCTACCTAAAAGACTTGGACTCCTACGCTGCTGTTGAGAAGATATCATTAGGACCTGAAACGGGGATCAAGGAAGTTGTATCAGAAGTGAGGATCATCAGTCGACTTAGGCATCGGAATCTGATGCAACTCATCGGTTGGTGCCACAAAGAAAGACAACTCCTACTGGCTTTCGAGTTCATGCCCAAAGGTAGGTTAGATGCTCATTTGTTCGAAGAAGAAAGCTCGTTAGTTTGGGAGGTACGATACAAAATTGCTCAAGGCTTAGCCTCCGGGTTGCTCTATCTACAACAAGAATTGGAACATTTTGTGCTGCATACGGATGTCAAATCCAGGAACGTTATGTTGGATTCAAATTTCAACCCTAAACTAGGGGGGTTTGGGTTAGCAAAGCTTCTGGACCACGAAGAAGGAATAGACAATCTTATTGCCGGAACCTATGGCTACATGGCTCCTGAATTCTTTACAGACGGTAAATATTCCAAGAAAACAGATGTCTACAGCTTCGGAGTTGTTGCTTTGGAAATAGCCTGCGGGAGAAAACCCATTGATCACCAGGCAGAAAGGAGTAAAATCGATATGGTGGAATGGGTTTGGGAGCTTTATGAAGAAGGGAAAGTCACAGAAGCAGCTGACCCAAAATTGTGTGGGATTTTTGATGAGCAGCAGATGGAGTGCTTGATGATTGTCGGATTGTGGTGTGCTCATCCGTGTGACAGTTCAAGACCTTCAATTCAAGAAGCAATTCGAGTGCTTAACTTTGAACTTCCATTGCCAGATCTCCCACCAAAGAAGCCAATTTTTCCATCATCTCCTTCATTGTCACCTCCTCCTTCAATGTCACTCTCGAGGTTGACTAGCACTAATGCTTCTGAATCTCGCCTGTACACAATCTTTCTCGCAGTCAGCTTTGTATTGAGGCTGCGCACCGCCATGATGAATAGAAAAAAGAGAGGAGATGAAGCGAGAGAGAATGCAGGATGGATTAGGGAGTCGGGTTTCTGA

Protein Analysis

749

Amino Acids

82.84

Weight (kDa)

6.44

Isoelectric Point (pI)

41.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 36 - 292 3e-54 Legume lectin domain
Pkinase PF00069 399 - 663 1.4e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 401 - 610 2.3e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 672
Acc16I TGCGCA 1 cut(s) 2168
AccB1I GGYRCC 1 cut(s) 1383
AccB7I CCANNNNNTGG 2 cut(s) 16, 621
AccI GTMKAC 2 cut(s) 1345, 1740
AccII CGCG 1 cut(s) 1181
AciI CCGC 6 cut(s) 570, 980, 1143, 1179, 1776, 2172
AclI AACGTT 1 cut(s) 1581
AclWI GGATC 6 cut(s) 414, 427, 554, 567, 1316, 1343
AcoI YGGCCR 1 cut(s) 265
AcsI RAATTY 5 cut(s) 113, 633, 850, 1597, 1700
AcuI CTGAAG 1 cut(s) 240
AdeI CACNNNGTG 1 cut(s) 846
AfaI GTAC 7 cut(s) 151, 370, 512, 997, 1163, 1485, 2129
AjnI CCWGG 7 cut(s) 228, 614, 620, 931, 1148, 1574, 1797
AjuI GAANNNNNNNTTGG 2 cut(s) 1571, 1603
Alw21I GWGCWC 2 cut(s) 439, 1948
Alw26I GTCTC 1 cut(s) 1209
AlwI GGATC 6 cut(s) 414, 427, 554, 567, 1316, 1343
AlwNI CAGNNNCTG 1 cut(s) 621
Ama87I CYCGRG 1 cut(s) 2089
AoxI GGCC 7 cut(s) 265, 396, 460, 545, 617, 934, 1144
ApeKI GCWGC 9 cut(s) 5, 76, 95, 225, 1271, 1555, 1871, 1906, 2164
ApoI RAATTY 5 cut(s) 113, 633, 850, 1597, 1700
ArsI GACNNNNNNTTYG 2 cut(s) 1208, 1240
Asp700I GAANNNNTTC 1 cut(s) 1986
AspLEI GCGC 2 cut(s) 412, 2169
AspS9I GGNCC 5 cut(s) 460, 618, 1145, 1295, 1642
AsuC2I CCSGG 2 cut(s) 299, 1516
AsuHPI GGTGA 7 cut(s) 30, 697, 832, 994, 1147, 1787, 2058
AsuII TTCGAA 1 cut(s) 1455
AvaI CYCGRG 1 cut(s) 2089
AvaII GGWCC 2 cut(s) 1295, 1642
BamHI GGATCC 2 cut(s) 419, 559
BanI GGYRCC 1 cut(s) 1383
BauI CACGAG 3 cut(s) 728, 844, 1054
Bbv12I GWGCWC 2 cut(s) 439, 1948
BbvI GCAGC 8 cut(s) 63, 107, 237, 1258, 1542, 1883, 1918, 2151
BccI CCATC 3 cut(s) 1906, 2056, 2217
BceAI ACGGC 3 cut(s) 252, 583, 921
BcgI CGANNNNNNTGC 2 cut(s) 167, 201
BciT130I CCWGG 7 cut(s) 230, 616, 622, 933, 1150, 1576, 1799
BclI TGATCA 3 cut(s) 49, 136, 1792
BcnI CCSGG 2 cut(s) 299, 1516
BcoDI GTCTC 1 cut(s) 1209
BfaI CTAG 3 cut(s) 884, 1613, 2100
BfmI CTRYAG 2 cut(s) 277, 1741
BfoI RGCGCY 1 cut(s) 413
BglII AGATCT 1 cut(s) 2020
BlpI GCTNAGC 1 cut(s) 1507
BmcAI AGTACT 1 cut(s) 997
Bme1390I CCNGG 9 cut(s) 230, 299, 616, 622, 933, 1150, 1516, 1576, 1799
Bme18I GGWCC 2 cut(s) 1295, 1642
BmeT110I CYCGRG 1 cut(s) 2089
BmgT120I GGNCC 5 cut(s) 460, 618, 1145, 1295, 1642
BmiI GGNNCC 6 cut(s) 421, 561, 1147, 1385, 1678, 1695
BmrFI CCNGG 9 cut(s) 230, 299, 616, 622, 933, 1150, 1516, 1576, 1799
BmsI GCATC 4 cut(s) 175, 1356, 1363, 1432
BoxI GACNNNNGTC 1 cut(s) 570
BpmI CTGGAG 1 cut(s) 903
Bpu1102I GCTNAGC 1 cut(s) 1507
Bpu14I TTCGAA 1 cut(s) 1455
BpuEI CTTGAG 1 cut(s) 1485
BpuMI CCSGG 2 cut(s) 299, 1516
Bsa29I ATCGAT 1 cut(s) 1818
BsaBI GATNNNNATC 1 cut(s) 587
BsaJI CCNNGG 6 cut(s) 177, 229, 480, 620, 931, 1148
BsaXI ACNNNNNCTCC 4 cut(s) 174, 204, 1247, 1277
Bse1I ACTGG 4 cut(s) 920, 1006, 1123, 1413
Bse3DI GCAATG 1 cut(s) 2012
Bse8I GATNNNNATC 1 cut(s) 587
BseBI CCWGG 7 cut(s) 230, 616, 622, 933, 1150, 1576, 1799
BseCI ATCGAT 1 cut(s) 1818
BseDI CCNNGG 6 cut(s) 177, 229, 480, 620, 931, 1148
BseGI GGATG 3 cut(s) 1570, 1948, 2228
BseJI GATNNNNATC 1 cut(s) 587
BseMI GCAATG 1 cut(s) 2012
BseMII CTCAG 2 cut(s) 486, 1128
BseNI ACTGG 4 cut(s) 920, 1006, 1123, 1413
BseRI GAGGAG 3 cut(s) 23, 2061, 2211
BseXI GCAGC 8 cut(s) 63, 107, 237, 1258, 1542, 1883, 1918, 2151
BsgI GTGCAG 2 cut(s) 114, 818
Bsh1236I CGCG 1 cut(s) 1181
Bsh1285I CGRYCG 1 cut(s) 574
BshFI GGCC 7 cut(s) 267, 398, 462, 547, 619, 936, 1146
BshNI GGYRCC 1 cut(s) 1383
BshVI ATCGAT 1 cut(s) 1818
BsiEI CGRYCG 1 cut(s) 574
BsiHKAI GWGCWC 2 cut(s) 439, 1948
BsiHKCI CYCGRG 1 cut(s) 2089
BsiSI CCGG 4 cut(s) 298, 782, 1515, 1674
BslFI GGGAC 1 cut(s) 314
BsmAI GTCTC 1 cut(s) 1209
BsmBI CGTCTC 1 cut(s) 1209
BsmFI GGGAC 1 cut(s) 314
BsmI GAATGC 1 cut(s) 2221
BsnI GGCC 7 cut(s) 267, 398, 462, 547, 619, 936, 1146
BsoBI CYCGRG 1 cut(s) 2089
Bsp119I TTCGAA 1 cut(s) 1455
Bsp1286I GDGCHC 2 cut(s) 439, 1948
Bsp1407I TGTACA 1 cut(s) 2127
Bsp143I GATC 9 cut(s) 49, 136, 419, 559, 763, 1308, 1335, 1792, 2020
Bsp1720I GCTNAGC 1 cut(s) 1507
BspACI CCGC 6 cut(s) 570, 980, 1143, 1179, 1776, 2172
BspANI GGCC 7 cut(s) 267, 398, 462, 547, 619, 936, 1146
BspCNI CTCAG 2 cut(s) 487, 1127
BspDI ATCGAT 1 cut(s) 1818
BspFNI CGCG 1 cut(s) 1181
BspHI TCATGA 2 cut(s) 348, 1108
BspLI GGNNCC 6 cut(s) 421, 561, 1147, 1385, 1678, 1695
BspPI GGATC 6 cut(s) 414, 427, 554, 567, 1316, 1343
BspT104I TTCGAA 1 cut(s) 1455
BspT107I GGYRCC 1 cut(s) 1383
BsrDI GCAATG 1 cut(s) 2012
BsrGI TGTACA 1 cut(s) 2127
BsrI ACTGG 4 cut(s) 920, 1006, 1123, 1413
BssECI CCNNGG 6 cut(s) 177, 229, 480, 620, 931, 1148
BssMI GATC 9 cut(s) 49, 136, 419, 559, 763, 1308, 1335, 1792, 2020
BssSI CACGAG 3 cut(s) 728, 844, 1054
Bst2BI CACGAG 3 cut(s) 728, 844, 1054
Bst2UI CCWGG 7 cut(s) 230, 616, 622, 933, 1150, 1576, 1799
Bst4CI ACNGT 5 cut(s) 149, 368, 553, 1715, 1961
Bst6I CTCTTC 1 cut(s) 150
BstAUI TGTACA 1 cut(s) 2127
BstBI TTCGAA 1 cut(s) 1455
BstC8I GCNNGC 2 cut(s) 396, 1774
BstDEI CTNAG 7 cut(s) 406, 495, 650, 692, 1114, 1349, 1507
BstDSI CCRYGG 1 cut(s) 480
BstENI CCTNNNNNAGG 1 cut(s) 1611
BstF5I GGATG 3 cut(s) 1570, 1948, 2228
BstFNI CGCG 1 cut(s) 1181
BstH2I RGCGCY 1 cut(s) 413
BstHHI GCGC 2 cut(s) 412, 2169
BstKTI GATC 9 cut(s) 52, 139, 422, 562, 766, 1311, 1338, 1795, 2023
BstMAI GTCTC 1 cut(s) 1209
BstMBI GATC 9 cut(s) 49, 136, 419, 559, 763, 1308, 1335, 1792, 2020
BstMCI CGRYCG 1 cut(s) 574
BstMWI GCNNNNNNNGC 3 cut(s) 26, 459, 827
BstNI CCWGG 7 cut(s) 230, 616, 622, 933, 1150, 1576, 1799
BstPAI GACNNNNGTC 1 cut(s) 570
BstSCI CCNGG 9 cut(s) 228, 297, 614, 620, 931, 1148, 1514, 1574, 1797
BstSFI CTRYAG 2 cut(s) 277, 1741
BstUI CGCG 1 cut(s) 1181
BstV1I GCAGC 8 cut(s) 63, 107, 237, 1258, 1542, 1883, 1918, 2151
BstX2I RGATCY 3 cut(s) 419, 559, 2020
BstYI RGATCY 3 cut(s) 419, 559, 2020
Bsu15I ATCGAT 1 cut(s) 1818
BsuRI GGCC 7 cut(s) 267, 398, 462, 547, 619, 936, 1146
BsuTUI ATCGAT 1 cut(s) 1818
BtgI CCRYGG 1 cut(s) 480
BtgZI GCGATG 1 cut(s) 10
BtsCI GGATG 3 cut(s) 1570, 1948, 2228
BtsI GCAGTG 1 cut(s) 531
BtsIMutI CAGTG 2 cut(s) 216, 531
Cac8I GCNNGC 2 cut(s) 396, 1774
CaiI CAGNNNCTG 1 cut(s) 621
CciI TCATGA 2 cut(s) 348, 1108
CfoI GCGC 2 cut(s) 412, 2169
Cfr13I GGNCC 5 cut(s) 460, 618, 1145, 1295, 1642
ClaI ATCGAT 1 cut(s) 1818
Csp6I GTAC 7 cut(s) 150, 369, 511, 996, 1162, 1484, 2128
CviAII CATG 7 cut(s) 11, 349, 757, 1109, 1423, 1690, 2176
CviQI GTAC 7 cut(s) 150, 369, 511, 996, 1162, 1484, 2128
DdeI CTNAG 7 cut(s) 406, 495, 650, 692, 1114, 1349, 1507
DpnI GATC 9 cut(s) 51, 138, 421, 561, 765, 1310, 1337, 1794, 2022
DpnII GATC 9 cut(s) 49, 136, 419, 559, 763, 1308, 1335, 1792, 2020
DraIII CACNNNGTG 1 cut(s) 846
EaeI YGGCCR 1 cut(s) 265
Eam1104I CTCTTC 1 cut(s) 150
EarI CTCTTC 1 cut(s) 150
Eco32I GATATC 1 cut(s) 1287
Eco47I GGWCC 2 cut(s) 1295, 1642
Eco57I CTGAAG 1 cut(s) 240
Eco88I CYCGRG 1 cut(s) 2089
EcoNI CCTNNNNNAGG 1 cut(s) 1611
EcoO109I RGGNCCY 2 cut(s) 618, 1295
EcoRI GAATTC 2 cut(s) 633, 1700
EcoRII CCWGG 7 cut(s) 228, 614, 620, 931, 1148, 1574, 1797
EcoRV GATATC 1 cut(s) 1287
Esp3I CGTCTC 1 cut(s) 1209
FaeI CATG 7 cut(s) 14, 352, 760, 1112, 1426, 1693, 2179
FalI AAGNNNNNCTT 2 cut(s) 633, 665
FaqI GGGAC 1 cut(s) 314
FatI CATG 7 cut(s) 10, 348, 756, 1108, 1422, 1689, 2175
FauI CCCGC 1 cut(s) 1769
FauNDI CATATG 1 cut(s) 537
FbaI TGATCA 3 cut(s) 49, 136, 1792
FblI GTMKAC 2 cut(s) 1345, 1740
FokI GGATG 3 cut(s) 1577, 1935, 2235
FspBI CTAG 3 cut(s) 884, 1613, 2100
FspI TGCGCA 1 cut(s) 2168
GlaI GCGC 2 cut(s) 411, 2168
GsuI CTGGAG 1 cut(s) 903
HaeII RGCGCY 1 cut(s) 413
HaeIII GGCC 7 cut(s) 267, 398, 462, 547, 619, 936, 1146
HapII CCGG 4 cut(s) 298, 782, 1515, 1674
HhaI GCGC 2 cut(s) 412, 2169
Hin1II CATG 7 cut(s) 14, 352, 760, 1112, 1426, 1693, 2179
Hin6I GCGC 2 cut(s) 410, 2167
HinP1I GCGC 2 cut(s) 410, 2167
HincII GTYRAC 4 cut(s) 472, 1120, 1346, 2097
HindII GTYRAC 4 cut(s) 472, 1120, 1346, 2097
HindIII AAGCTT 4 cut(s) 44, 1094, 1208, 1634
HpaII CCGG 4 cut(s) 298, 782, 1515, 1674
HphI GGTGA 7 cut(s) 30, 697, 832, 994, 1147, 1787, 2058
Hpy166II GTNNAC 7 cut(s) 472, 1120, 1237, 1346, 1741, 2097, 2130
Hpy8I GTNNAC 7 cut(s) 472, 1120, 1237, 1346, 1741, 2097, 2130
Hpy99I CGWCG 1 cut(s) 132
HpyCH4III ACNGT 5 cut(s) 149, 368, 553, 1715, 1961
HpyCH4IV ACGT 2 cut(s) 344, 1581
HpyCH4V TGCA 7 cut(s) 95, 541, 835, 1059, 1369, 1558, 2219
HpyF10VI GCNNNNNNNGC 3 cut(s) 26, 459, 827
HpyF3I CTNAG 7 cut(s) 406, 495, 650, 692, 1114, 1349, 1507
HpySE526I ACGT 2 cut(s) 344, 1581
Hsp92II CATG 7 cut(s) 14, 352, 760, 1112, 1426, 1693, 2179
HspAI GCGC 2 cut(s) 410, 2167
Ksp22I TGATCA 3 cut(s) 49, 136, 1792
Kzo9I GATC 9 cut(s) 49, 136, 419, 559, 763, 1308, 1335, 1792, 2020
LmnI GCTCC 5 cut(s) 103, 300, 482, 1699, 1840
Lsp1109I GCAGC 8 cut(s) 63, 107, 237, 1258, 1542, 1883, 1918, 2151
LweI GCATC 4 cut(s) 175, 1356, 1363, 1432
MaeI CTAG 3 cut(s) 884, 1613, 2100
MaeII ACGT 2 cut(s) 344, 1581
MaeIII GTNAC 7 cut(s) 172, 490, 1125, 1861, 1955, 2064, 2082
MalI GATC 9 cut(s) 51, 138, 421, 561, 765, 1310, 1337, 1794, 2022
MboI GATC 9 cut(s) 49, 136, 419, 559, 763, 1308, 1335, 1792, 2020
MboII GAAGA 8 cut(s) 167, 394, 816, 1294, 1469, 1472, 1661, 1862
MflI RGATCY 3 cut(s) 419, 559, 2020
MhlI GDGCHC 2 cut(s) 439, 1948
MlyI GAGTC 4 cut(s) 1106, 1111, 1256, 2243
MmeI TCCRAC 4 cut(s) 151, 950, 1569, 1912
MroXI GAANNNNTTC 1 cut(s) 1986
MseI TTAA 2 cut(s) 83, 1998
MslI CAYNNNNRTG 6 cut(s) 347, 755, 1194, 1563, 1953, 2174
MspA1I CMGCKG 1 cut(s) 1874
MspI CCGG 4 cut(s) 298, 782, 1515, 1674
MspR9I CCNGG 9 cut(s) 230, 299, 616, 622, 933, 1150, 1516, 1576, 1799
Mva1269I GAATGC 1 cut(s) 2221
MvaI CCWGG 7 cut(s) 230, 616, 622, 933, 1150, 1576, 1799
MvnI CGCG 1 cut(s) 1181
MwoI GCNNNNNNNGC 3 cut(s) 26, 459, 827
NciI CCSGG 2 cut(s) 299, 1516
NdeI CATATG 1 cut(s) 537
NdeII GATC 9 cut(s) 49, 136, 419, 559, 763, 1308, 1335, 1792, 2020
NlaIII CATG 7 cut(s) 14, 352, 760, 1112, 1426, 1693, 2179
NlaIV GGNNCC 6 cut(s) 421, 561, 1147, 1385, 1678, 1695
NmuCI GTSAC 4 cut(s) 1861, 1955, 2064, 2082
NsbI TGCGCA 1 cut(s) 2168
NspV TTCGAA 1 cut(s) 1455
PaeR7I CTCGAG 1 cut(s) 2089
PagI TCATGA 2 cut(s) 348, 1108
PctI GAATGC 1 cut(s) 2221
PdmI GAANNNNTTC 1 cut(s) 1986
PfeI GAWTC 7 cut(s) 664, 878, 914, 1014, 1360, 1592, 2117
PflMI CCANNNNNTGG 2 cut(s) 16, 621
PfoI TCCNGGA 2 cut(s) 297, 1574
PleI GAGTC 4 cut(s) 1106, 1110, 1256, 2242
PpsI GAGTC 4 cut(s) 1106, 1110, 1256, 2242
PpuMI RGGWCCY 1 cut(s) 1295
PshAI GACNNNNGTC 1 cut(s) 570
PsiI TTATAA 1 cut(s) 672
Psp1406I AACGTT 1 cut(s) 1581
Psp5II RGGWCCY 1 cut(s) 1295
Psp6I CCWGG 7 cut(s) 228, 614, 620, 931, 1148, 1574, 1797
PspGI CCWGG 7 cut(s) 228, 614, 620, 931, 1148, 1574, 1797
PspN4I GGNNCC 6 cut(s) 421, 561, 1147, 1385, 1678, 1695
PspPI GGNCC 5 cut(s) 460, 618, 1145, 1295, 1642
PspPPI RGGWCCY 1 cut(s) 1295
PstNI CAGNNNCTG 1 cut(s) 621
PsuI RGATCY 3 cut(s) 419, 559, 2020
PvuII CAGCTG 1 cut(s) 1874
RsaI GTAC 7 cut(s) 151, 370, 512, 997, 1163, 1485, 2129
RsaNI GTAC 7 cut(s) 150, 369, 511, 996, 1162, 1484, 2128
RseI CAYNNNNRTG 6 cut(s) 347, 755, 1194, 1563, 1953, 2174
SalI GTCGAC 1 cut(s) 1344
SaqAI TTAA 2 cut(s) 83, 1998
Sau3AI GATC 9 cut(s) 49, 136, 419, 559, 763, 1308, 1335, 1792, 2020
Sau96I GGNCC 5 cut(s) 460, 618, 1145, 1295, 1642
ScaI AGTACT 1 cut(s) 997
SchI GAGTC 4 cut(s) 1106, 1111, 1256, 2243
ScrFI CCNGG 9 cut(s) 230, 299, 616, 622, 933, 1150, 1516, 1576, 1799
SduI GDGCHC 2 cut(s) 439, 1948
SfaNI GCATC 4 cut(s) 175, 1356, 1363, 1432
SfcI CTRYAG 2 cut(s) 277, 1741
Sfr274I CTCGAG 1 cut(s) 2089
SfuI TTCGAA 1 cut(s) 1455
SinI GGWCC 2 cut(s) 1295, 1642
SlaI CTCGAG 1 cut(s) 2089
SmiMI CAYNNNNRTG 6 cut(s) 347, 755, 1194, 1563, 1953, 2174
SmlI CTYRAG 2 cut(s) 1500, 2089
SmoI CTYRAG 2 cut(s) 1500, 2089
SsiI CCGC 6 cut(s) 570, 980, 1143, 1179, 1776, 2172
SspI AATATT 2 cut(s) 610, 1721
SspMI CTAG 3 cut(s) 884, 1613, 2100
StyD4I CCNGG 9 cut(s) 228, 297, 614, 620, 931, 1148, 1514, 1574, 1797
TaaI ACNGT 5 cut(s) 149, 368, 553, 1715, 1961
TaiI ACGT 2 cut(s) 347, 1584
TaqI TCGA 8 cut(s) 387, 683, 1345, 1416, 1455, 1818, 1990, 2090
TatI WGTACW 2 cut(s) 995, 2127
TauI GCSGC 1 cut(s) 1146
TfiI GAWTC 7 cut(s) 664, 878, 914, 1014, 1360, 1592, 2117
Tru1I TTAA 2 cut(s) 83, 1998
Tru9I TTAA 2 cut(s) 83, 1998
TscAI CASTG 2 cut(s) 223, 531
TseFI GTSAC 4 cut(s) 1861, 1955, 2064, 2082
TseI GCWGC 9 cut(s) 5, 76, 95, 225, 1271, 1555, 1871, 1906, 2164
Tsp45I GTSAC 4 cut(s) 1861, 1955, 2064, 2082
TspDTI ATGAA 9 cut(s) 337, 524, 891, 1006, 1411, 1863, 2049, 2195, 2217
TspGWI ACGGA 6 cut(s) 90, 167, 469, 1233, 1577, 1941
TspRI CASTG 2 cut(s) 223, 531
Van91I CCANNNNNTGG 2 cut(s) 16, 621
VpaK11BI GGWCC 2 cut(s) 1295, 1642
XagI CCTNNNNNAGG 1 cut(s) 1611
XapI RAATTY 5 cut(s) 113, 633, 850, 1597, 1700
XhoI CTCGAG 1 cut(s) 2089
XmiI GTMKAC 2 cut(s) 1345, 1740
XmnI GAANNNNTTC 1 cut(s) 1986
XspI CTAG 3 cut(s) 884, 1613, 2100
ZrmI AGTACT 1 cut(s) 997
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.