RchiOBHm_Chr4g0399611

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
16895762 .. 16897868
2107 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ37172

Sequence Viewer

Length: 2031 bp
ATGGATTGCATTTGGGTTTTGCTTGGAATGTCACTGAGCAGTATGGCAATAAATTTTCATTCTCTTAGGCACTCGAAAAATTTCTCTATTACCTTCTTCACTTTCATCAATTTTTTGCTTCCCTTTTCCCATCCACTTTCCTTCAGTATAAGCCGCTTTGAGCCAGGTGCAAAGAACATACATTATGATGGTGATGCTGCTCCTTCTTCATTTGGAATGATTGAACTCAACCCAATCGATTCATTCCGTGTTGGCCGGGCTACATATGCAAAACCTCTGCACTTATGGGACAAGGGCTCACTTGCAGACTTCACCAGTAATTTCTCTTTCACAGTCGACACTTTTAACAATCGCTTAGGCCATTTTGCAGATGGACTTGTCTTTTTCCTTGCTCCTGTTGATTATCCAATTCCACCCAACTCTAATGGTTCTAATCTAGGACTATTCAACAGCACAACTCGTTATGCAGCTTCCCAAAACCAAGTTGTAACGGTTGAGTTAGACACTTTCCCAAACATAGAGTATGATCCACCAGCACCGCATGTTGGGATAAATATCAACACCATCTCATCAGTTGTTAATGCTAGTTGGGATGCTAGCCTTCACAGTGGGAAAGTGGGTCATATCCAGATAGCTTATAATGCTACCACCTACAACCTCAGTGTGTTTTGGACATATGAGGATAACTTGAACCCAGATTATGGGAGCACTAATTCTTCTCTTTCTTATATTATTGACTTAAGAAAGGTTCTGCCTGAGTGGGTTACCATTGGATTCTCAGCTGCTACTGGAGCGGTGGATGAGCGGCACGTTATATATTCATGGGATTTCAGTTCTGATTTGGATTCAGAAGAGACTAGCAAGAATGAGTGGATGGCAATCTTGATCGAGGTGGCTGCAGCTTCTTTGTTCGGTTTGTTGCTTGGGTGGACCATATATTGGTTCGTCAGAAGGAAGAGGATAAGAAGACTAGCCTCGAAAGATGCAAAAGGAAATGGCAATTACTCCAATGCTGATGTACCCCGCTCTATAAATGCAGATCTTGAGAGAGCATCCTTACCAAAACAATTTGCTTACCAAGAATTACTTAAAGCCACCGATGGCTTTGCAGATGGTAGTATATTAGGCCAAGGAGGTTCTGGACGAGTTTATAAAGGAATCCTTCGGGACCTAGGACTCACAGTTGCTGTCAAGATGATTATTGCAGAATCTGATCCGAACTATGAGAAAACATTCACCAATGAAGTTAAGATCATAAGCCGCTTAATCCATCGGAACCTGGTGCAATTTATTGGATGGTGTTACAAGGAAGGAGAATGCCTACTTGTTTATGCCTACATGCCTAACAGCAGCCTTGATAAGCATCTGTTTGGCTCCAGGACAACCCTACAGTGGCATTTGAGGCATAAGATCGCTTTAGATCTAGCCTCAGCCCTTCATTACCTGCATGAAGATGCAGAGCAGCCAGTACTTCATAGGGATATCAAATCAGCTAACGTCTTGTTGGACAAGGATTTCAACTGTAAGCTCGGTGATTTTGGGATTTCTAAACTTGTGGATCCCCGGTTTAGGACTCAGACAACGAGGGTGGTAGGGACTTTGGGATACATCGCGCCAGAATATGCAAATGAAGGGAGGGCCAGTAAAGAATCAGACATGTTTAGTTTTGGAGTTCTGGCCTTGGAACTTGCATGTGGAGATAGGGCTTACCAGGATGAAAGATTTCAGGTCGCACTTGTCAGTCAGGTTTGGCGACATTACCTTTCTGGAAATGTTCTGGATGTAGCTGATAAGAGACTGGATATGATATTTGATCAAAGGCAAATGAAATGCTTGTTAAATGTGGGATTATGGTGCACCAACCCTAACAGCAAGGAAAGACCAAAAGCTGGAGATGTAATGAAGGTGCTTCAGCTTGAAGCACCACTGCCGGAACTTCCACATGACATGCATGACCGTTCACTGCCTCAACGTCAAGATCAAGCTGGATCTTCTCACTTATCCTTAACTTCTAGCTTAGAATGTCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

676

Amino Acids

75.87

Weight (kDa)

6.1

Isoelectric Point (pI)

40.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 46 - 289 5.6e-67 Legume lectin domain
Lectin_L-type_dom PF18483 58 - 271 1.4e-07 Legume lectin beta-barrel domain
Pkinase PF00069 371 - 634 2.1e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 374 - 573 1.3e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 639, 1152
Acc36I ACCTGC 1 cut(s) 1452
AccB7I CCANNNNNTGG 3 cut(s) 701, 939, 1889
AccBSI CCGCTC 3 cut(s) 794, 805, 1026
AccI GTMKAC 1 cut(s) 336
AccII CGCG 1 cut(s) 1613
AciI CCGC 6 cut(s) 154, 539, 794, 805, 1024, 1261
AclWI GGATC 5 cut(s) 521, 1208, 1553, 1566, 1996
AcoI YGGCCR 1 cut(s) 253
AcsI RAATTY 2 cut(s) 52, 79
AcuI CTGAAG 2 cut(s) 127, 1895
AfaI GTAC 2 cut(s) 1020, 1470
AfiI CCNNNNNNNGG 6 cut(s) 545, 701, 939, 1392, 1569, 1889
AflII CTTAAG 1 cut(s) 739
AflIII ACRYGT 1 cut(s) 1656
AgsI TTSAA 5 cut(s) 224, 448, 691, 1519, 1919
AjnI CCWGG 4 cut(s) 163, 1278, 1376, 1710
Alw21I GWGCWC 2 cut(s) 710, 1859
Alw26I GTCTC 2 cut(s) 848, 1789
Alw44I GTGCAC 1 cut(s) 1855
AlwI GGATC 5 cut(s) 521, 1208, 1553, 1566, 1996
AlwNI CAGNNNCTG 2 cut(s) 1187, 1211
AoxI GGCC 5 cut(s) 253, 358, 1126, 1638, 1677
ApaLI GTGCAC 1 cut(s) 1855
ApeKI GCWGC 7 cut(s) 197, 467, 782, 896, 899, 1350, 1462
ApoI RAATTY 2 cut(s) 52, 79
Asp700I GAANNNNTTC 3 cut(s) 80, 1232, 1722
AspA2I CCTAGG 1 cut(s) 1171
AspLEI GCGC 1 cut(s) 1615
AspS9I GGNCC 3 cut(s) 930, 1168, 1638
AsuC2I CCSGG 2 cut(s) 257, 1564
AsuHPI GGTGA 4 cut(s) 203, 304, 1228, 1544
AsuNHI GCTAGC 1 cut(s) 596
AvaII GGWCC 2 cut(s) 930, 1168
AvrII CCTAGG 1 cut(s) 1171
BaeGI GKGCMC 1 cut(s) 1859
BamHI GGATCC 1 cut(s) 1558
BanII GRGCYC 1 cut(s) 299
BbsI GAAGAC 1 cut(s) 973
Bbv12I GWGCWC 2 cut(s) 710, 1859
BbvCI CCTCAGC 1 cut(s) 1429
BbvI GCAGC 7 cut(s) 184, 479, 769, 883, 911, 1362, 1474
BccI CCATC 9 cut(s) 138, 182, 365, 572, 868, 1094, 1106, 1278, 1290
BcgI CGANNNNNNTGC 4 cut(s) 878, 912, 1088, 1122
BciT130I CCWGG 4 cut(s) 165, 1280, 1378, 1712
BciVI GTATCC 1 cut(s) 1598
BclI TGATCA 1 cut(s) 1813
BcnI CCSGG 2 cut(s) 257, 1564
BcoDI GTCTC 2 cut(s) 848, 1789
BfaI CTAG 8 cut(s) 437, 585, 597, 858, 971, 1172, 1424, 2013
BfmI CTRYAG 2 cut(s) 897, 1388
BfrI CTTAAG 1 cut(s) 739
BfuAI ACCTGC 1 cut(s) 1452
BfuI GTATCC 1 cut(s) 1598
BglII AGATCT 2 cut(s) 1039, 1420
BlnI CCTAGG 1 cut(s) 1171
BmcAI AGTACT 1 cut(s) 1470
Bme1390I CCNGG 6 cut(s) 165, 257, 1280, 1378, 1564, 1712
Bme18I GGWCC 2 cut(s) 930, 1168
BmgT120I GGNCC 3 cut(s) 930, 1168, 1638
BmiI GGNNCC 4 cut(s) 1169, 1277, 1375, 1560
BmrFI CCNGG 6 cut(s) 165, 257, 1280, 1378, 1564, 1712
BmsI GCATC 6 cut(s) 184, 583, 973, 1061, 1372, 1444
BmtI GCTAGC 1 cut(s) 600
BpiI GAAGAC 1 cut(s) 973
BpmI CTGGAG 3 cut(s) 810, 1360, 1911
Bpu10I CCTNAGC 2 cut(s) 355, 1429
BpuEI CTTGAG 1 cut(s) 1064
BpuMI CCSGG 2 cut(s) 257, 1564
Bsa29I ATCGAT 1 cut(s) 237
BsaBI GATNNNNATC 3 cut(s) 554, 878, 1362
BsaJI CCNNGG 4 cut(s) 1129, 1171, 1562, 1680
BsaXI ACNNNNNCTCC 2 cut(s) 1627, 1657
Bsc4I CCNNNNNNNGG 6 cut(s) 545, 701, 939, 1392, 1569, 1889
Bse1I ACTGG 5 cut(s) 315, 793, 1466, 1641, 1803
Bse8I GATNNNNATC 3 cut(s) 554, 878, 1362
BseBI CCWGG 4 cut(s) 165, 1280, 1378, 1712
BseCI ATCGAT 1 cut(s) 237
BseDI CCNNGG 4 cut(s) 1129, 1171, 1562, 1680
BseGI GGATG 8 cut(s) 130, 598, 805, 879, 1052, 1301, 1720, 1786
BseJI GATNNNNATC 3 cut(s) 554, 878, 1362
BseLI CCNNNNNNNGG 6 cut(s) 545, 701, 939, 1392, 1569, 1889
BseMII CTCAG 6 cut(s) 26, 673, 747, 792, 1443, 1589
BseNI ACTGG 5 cut(s) 315, 793, 1466, 1641, 1803
BseSI GKGCMC 1 cut(s) 1859
BseXI GCAGC 7 cut(s) 184, 479, 769, 883, 911, 1362, 1474
BsgI GTGCAG 1 cut(s) 263
Bsh1236I CGCG 1 cut(s) 1613
BshFI GGCC 5 cut(s) 255, 360, 1128, 1640, 1679
BshVI ATCGAT 1 cut(s) 237
BsiHKAI GWGCWC 2 cut(s) 710, 1859
BsiSI CCGG 3 cut(s) 256, 1564, 1931
BslFI GGGAC 3 cut(s) 302, 1181, 1609
BslI CCNNNNNNNGG 6 cut(s) 545, 701, 939, 1392, 1569, 1889
BsmAI GTCTC 2 cut(s) 848, 1789
BsmFI GGGAC 3 cut(s) 302, 1181, 1609
BsmI GAATGC 1 cut(s) 1322
BsnI GGCC 5 cut(s) 255, 360, 1128, 1640, 1679
Bsp1286I GDGCHC 3 cut(s) 299, 710, 1859
BspACI CCGC 6 cut(s) 154, 539, 794, 805, 1024, 1261
BspANI GGCC 5 cut(s) 255, 360, 1128, 1640, 1679
BspCNI CTCAG 6 cut(s) 27, 672, 748, 791, 1442, 1588
BspDI ATCGAT 1 cut(s) 237
BspFNI CGCG 1 cut(s) 1613
BspLI GGNNCC 4 cut(s) 1169, 1277, 1375, 1560
BspMAI CTGCAG 1 cut(s) 901
BspMI ACCTGC 1 cut(s) 1452
BspOI GCTAGC 1 cut(s) 600
BspPI GGATC 5 cut(s) 521, 1208, 1553, 1566, 1996
BspTI CTTAAG 1 cut(s) 739
BsrBI CCGCTC 3 cut(s) 794, 805, 1026
BsrI ACTGG 5 cut(s) 315, 793, 1466, 1641, 1803
BssECI CCNNGG 4 cut(s) 1129, 1171, 1562, 1680
BssT1I CCWWGG 3 cut(s) 1129, 1171, 1680
Bst2UI CCWGG 4 cut(s) 165, 1280, 1378, 1712
Bst4CI ACNGT 7 cut(s) 334, 493, 608, 1183, 1392, 1523, 1958
Bst6I CTCTTC 2 cut(s) 846, 950
BstAFI CTTAAG 1 cut(s) 739
BstC8I GCNNGC 1 cut(s) 598
BstDEI CTNAG 9 cut(s) 35, 65, 355, 659, 756, 778, 1429, 1575, 2017
BstEII GGTNACC 1 cut(s) 763
BstF5I GGATG 8 cut(s) 130, 598, 805, 879, 1052, 1301, 1720, 1786
BstFNI CGCG 1 cut(s) 1613
BstHHI GCGC 1 cut(s) 1615
BstMAI GTCTC 2 cut(s) 848, 1789
BstMWI GCNNNNNNNGC 4 cut(s) 266, 641, 791, 1402
BstNI CCWGG 4 cut(s) 165, 1280, 1378, 1712
BstNSI RCATGY 5 cut(s) 545, 1342, 1660, 1695, 1951
BstPI GGTNACC 1 cut(s) 763
BstSCI CCNGG 6 cut(s) 163, 255, 1278, 1376, 1562, 1710
BstSFI CTRYAG 2 cut(s) 897, 1388
BstSLI GKGCMC 1 cut(s) 1859
BstUI CGCG 1 cut(s) 1613
BstV1I GCAGC 7 cut(s) 184, 479, 769, 883, 911, 1362, 1474
BstV2I GAAGAC 1 cut(s) 973
BstX2I RGATCY 4 cut(s) 1039, 1420, 1558, 1988
BstYI RGATCY 4 cut(s) 1039, 1420, 1558, 1988
Bsu15I ATCGAT 1 cut(s) 237
BsuI GTATCC 1 cut(s) 1598
BsuRI GGCC 5 cut(s) 255, 360, 1128, 1640, 1679
BsuTUI ATCGAT 1 cut(s) 237
BtgZI GCGATG 1 cut(s) 1594
BtsCI GGATG 8 cut(s) 130, 598, 805, 879, 1052, 1301, 1720, 1786
BtsI GCAGTG 2 cut(s) 1925, 1961
BtsIMutI CAGTG 6 cut(s) 32, 613, 667, 1397, 1925, 1961
BveI ACCTGC 1 cut(s) 1452
Cac8I GCNNGC 1 cut(s) 598
CaiI CAGNNNCTG 2 cut(s) 1187, 1211
CfoI GCGC 1 cut(s) 1615
Cfr13I GGNCC 3 cut(s) 930, 1168, 1638
ClaI ATCGAT 1 cut(s) 237
CsiI ACCWGGT 1 cut(s) 1278
Csp6I GTAC 2 cut(s) 1019, 1469
CspCI CAANNNNNGTGG 2 cut(s) 1569, 1604
CviAII CATG 9 cut(s) 542, 822, 1339, 1448, 1657, 1692, 1943, 1948, 1952
CviQI GTAC 2 cut(s) 1019, 1469
DdeI CTNAG 9 cut(s) 35, 65, 355, 659, 756, 778, 1429, 1575, 2017
EaeI YGGCCR 1 cut(s) 253
Eam1104I CTCTTC 2 cut(s) 846, 950
EarI CTCTTC 2 cut(s) 846, 950
Eco130I CCWWGG 3 cut(s) 1129, 1171, 1680
Eco24I GRGCYC 1 cut(s) 299
Eco32I GATATC 1 cut(s) 1483
Eco47I GGWCC 2 cut(s) 930, 1168
Eco57I CTGAAG 2 cut(s) 127, 1895
Eco91I GGTNACC 1 cut(s) 763
EcoO109I RGGNCCY 1 cut(s) 1168
EcoO65I GGTNACC 1 cut(s) 763
EcoRII CCWGG 4 cut(s) 163, 1278, 1376, 1710
EcoRV GATATC 1 cut(s) 1483
EcoT14I CCWWGG 3 cut(s) 1129, 1171, 1680
EcoT22I ATGCAT 1 cut(s) 1953
EcoT38I GRGCYC 1 cut(s) 299
ErhI CCWWGG 3 cut(s) 1129, 1171, 1680
FaeI CATG 9 cut(s) 545, 825, 1342, 1451, 1660, 1695, 1946, 1951, 1955
FalI AAGNNNNNCTT 4 cut(s) 1071, 1103, 1146, 1178
FaqI GGGAC 3 cut(s) 302, 1181, 1609
FatI CATG 9 cut(s) 541, 821, 1338, 1447, 1656, 1691, 1942, 1947, 1951
FauI CCCGC 1 cut(s) 1031
FauNDI CATATG 2 cut(s) 265, 676
FbaI TGATCA 1 cut(s) 1813
FblI GTMKAC 1 cut(s) 336
FokI GGATG 8 cut(s) 117, 605, 812, 886, 1039, 1308, 1727, 1793
FriOI GRGCYC 1 cut(s) 299
FspBI CTAG 8 cut(s) 437, 585, 597, 858, 971, 1172, 1424, 2013
GlaI GCGC 1 cut(s) 1614
GsuI CTGGAG 3 cut(s) 810, 1360, 1911
HaeIII GGCC 5 cut(s) 255, 360, 1128, 1640, 1679
HapII CCGG 3 cut(s) 256, 1564, 1931
HhaI GCGC 1 cut(s) 1615
Hin1II CATG 9 cut(s) 545, 825, 1342, 1451, 1660, 1695, 1946, 1951, 1955
Hin6I GCGC 1 cut(s) 1613
HinP1I GCGC 1 cut(s) 1613
HincII GTYRAC 1 cut(s) 337
HindII GTYRAC 1 cut(s) 337
HinfI GANTC 8 cut(s) 239, 774, 845, 1158, 1176, 1208, 1573, 1649
HpaII CCGG 3 cut(s) 256, 1564, 1931
HphI GGTGA 4 cut(s) 203, 304, 1228, 1544
Hpy166II GTNNAC 4 cut(s) 337, 930, 1857, 1961
Hpy188I TCNGA 8 cut(s) 838, 850, 950, 1213, 1218, 1275, 1578, 1654
Hpy188III TCNNGA 9 cut(s) 628, 883, 1043, 1140, 1166, 1192, 1767, 1778, 1976
Hpy8I GTNNAC 4 cut(s) 337, 930, 1857, 1961
HpyCH4III ACNGT 7 cut(s) 334, 493, 608, 1183, 1392, 1523, 1958
HpyCH4IV ACGT 3 cut(s) 810, 1497, 1972
HpyF10VI GCNNNNNNNGC 4 cut(s) 266, 641, 791, 1402
HpyF3I CTNAG 9 cut(s) 35, 65, 355, 659, 756, 778, 1429, 1575, 2017
HpySE526I ACGT 3 cut(s) 810, 1497, 1972
Hsp92II CATG 9 cut(s) 545, 825, 1342, 1451, 1660, 1695, 1946, 1951, 1955
HspAI GCGC 1 cut(s) 1613
Ksp22I TGATCA 1 cut(s) 1813
LmnI GCTCC 5 cut(s) 205, 397, 705, 791, 1379
Lsp1109I GCAGC 7 cut(s) 184, 479, 769, 883, 911, 1362, 1474
LweI GCATC 6 cut(s) 184, 583, 973, 1061, 1372, 1444
MabI ACCWGGT 1 cut(s) 1278
MaeI CTAG 8 cut(s) 437, 585, 597, 858, 971, 1172, 1424, 2013
MaeII ACGT 3 cut(s) 810, 1497, 1972
MaeIII GTNAC 4 cut(s) 30, 487, 763, 1301
MbiI CCGCTC 3 cut(s) 794, 805, 1026
MboII GAAGA 8 cut(s) 88, 198, 708, 863, 967, 978, 1463, 1983
MflI RGATCY 4 cut(s) 1039, 1420, 1558, 1988
MhlI GDGCHC 3 cut(s) 299, 710, 1859
MlyI GAGTC 2 cut(s) 1170, 1567
MmeI TCCRAC 1 cut(s) 1485
Mph1103I ATGCAT 1 cut(s) 1953
MroXI GAANNNNTTC 3 cut(s) 80, 1232, 1722
MseI TTAA 9 cut(s) 345, 579, 740, 1089, 1248, 1265, 1838, 2006, 2029
MslI CAYNNNNRTG 2 cut(s) 186, 1452
MspA1I CMGCKG 1 cut(s) 782
MspCI CTTAAG 1 cut(s) 739
MspI CCGG 3 cut(s) 256, 1564, 1931
MspR9I CCNGG 6 cut(s) 165, 257, 1280, 1378, 1564, 1712
Mva1269I GAATGC 1 cut(s) 1322
MvaI CCWGG 4 cut(s) 165, 1280, 1378, 1712
MvnI CGCG 1 cut(s) 1613
MwoI GCNNNNNNNGC 4 cut(s) 266, 641, 791, 1402
NciI CCSGG 2 cut(s) 257, 1564
NdeI CATATG 2 cut(s) 265, 676
NheI GCTAGC 1 cut(s) 596
NlaIII CATG 9 cut(s) 545, 825, 1342, 1451, 1660, 1695, 1946, 1951, 1955
NlaIV GGNNCC 4 cut(s) 1169, 1277, 1375, 1560
NmuCI GTSAC 1 cut(s) 30
NsiI ATGCAT 1 cut(s) 1953
NspI RCATGY 5 cut(s) 545, 1342, 1660, 1695, 1951
PciI ACATGT 1 cut(s) 1656
PctI GAATGC 1 cut(s) 1322
PdmI GAANNNNTTC 3 cut(s) 80, 1232, 1722
PfeI GAWTC 6 cut(s) 239, 774, 845, 1158, 1208, 1649
PflMI CCANNNNNTGG 3 cut(s) 701, 939, 1889
PfoI TCCNGGA 1 cut(s) 1376
PleI GAGTC 2 cut(s) 1170, 1567
PpsI GAGTC 2 cut(s) 1170, 1567
PpuMI RGGWCCY 1 cut(s) 1168
PscI ACATGT 1 cut(s) 1656
PsiI TTATAA 2 cut(s) 639, 1152
Psp5II RGGWCCY 1 cut(s) 1168
Psp6I CCWGG 4 cut(s) 163, 1278, 1376, 1710
PspEI GGTNACC 1 cut(s) 763
PspGI CCWGG 4 cut(s) 163, 1278, 1376, 1710
PspN4I GGNNCC 4 cut(s) 1169, 1277, 1375, 1560
PspPI GGNCC 3 cut(s) 930, 1168, 1638
PspPPI RGGWCCY 1 cut(s) 1168
PstI CTGCAG 1 cut(s) 901
PstNI CAGNNNCTG 2 cut(s) 1187, 1211
PsuI RGATCY 4 cut(s) 1039, 1420, 1558, 1988
PvuII CAGCTG 1 cut(s) 782
RsaI GTAC 2 cut(s) 1020, 1470
RsaNI GTAC 2 cut(s) 1019, 1469
RseI CAYNNNNRTG 2 cut(s) 186, 1452
SalI GTCGAC 1 cut(s) 335
SaqAI TTAA 9 cut(s) 345, 579, 740, 1089, 1248, 1265, 1838, 2006, 2029
Sau96I GGNCC 3 cut(s) 930, 1168, 1638
ScaI AGTACT 1 cut(s) 1470
SchI GAGTC 2 cut(s) 1170, 1567
ScrFI CCNGG 6 cut(s) 165, 257, 1280, 1378, 1564, 1712
SduI GDGCHC 3 cut(s) 299, 710, 1859
SexAI ACCWGGT 1 cut(s) 1278
SfaNI GCATC 6 cut(s) 184, 583, 973, 1061, 1372, 1444
SfcI CTRYAG 2 cut(s) 897, 1388
SinI GGWCC 2 cut(s) 930, 1168
SmiMI CAYNNNNRTG 2 cut(s) 186, 1452
SmlI CTYRAG 2 cut(s) 739, 1043
SmoI CTYRAG 2 cut(s) 739, 1043
SsiI CCGC 6 cut(s) 154, 539, 794, 805, 1024, 1261
SspMI CTAG 8 cut(s) 437, 585, 597, 858, 971, 1172, 1424, 2013
StyD4I CCNGG 6 cut(s) 163, 255, 1278, 1376, 1562, 1710
StyI CCWWGG 3 cut(s) 1129, 1171, 1680
TaaI ACNGT 7 cut(s) 334, 493, 608, 1183, 1392, 1523, 1958
TaiI ACGT 3 cut(s) 813, 1500, 1975
TaqI TCGA 5 cut(s) 74, 237, 336, 888, 977
TatI WGTACW 1 cut(s) 1468
TauI GCSGC 3 cut(s) 156, 808, 1263
TfiI GAWTC 6 cut(s) 239, 774, 845, 1158, 1208, 1649
Tru1I TTAA 9 cut(s) 345, 579, 740, 1089, 1248, 1265, 1838, 2006, 2029
Tru9I TTAA 9 cut(s) 345, 579, 740, 1089, 1248, 1265, 1838, 2006, 2029
TscAI CASTG 6 cut(s) 39, 613, 667, 1397, 1932, 1968
TseFI GTSAC 1 cut(s) 30
TseI GCWGC 7 cut(s) 197, 467, 782, 896, 899, 1350, 1462
Tsp45I GTSAC 1 cut(s) 30
TspGWI ACGGA 1 cut(s) 236
TspRI CASTG 6 cut(s) 39, 613, 667, 1397, 1932, 1968
Van91I CCANNNNNTGG 3 cut(s) 701, 939, 1889
Vha464I CTTAAG 1 cut(s) 739
VneI GTGCAC 1 cut(s) 1855
VpaK11BI GGWCC 2 cut(s) 930, 1168
XapI RAATTY 2 cut(s) 52, 79
XceI RCATGY 5 cut(s) 545, 1342, 1660, 1695, 1951
XcmI CCANNNNNNNNNTGG 2 cut(s) 368, 1136
XmaJI CCTAGG 1 cut(s) 1171
XmiI GTMKAC 1 cut(s) 336
XmnI GAANNNNTTC 3 cut(s) 80, 1232, 1722
XspI CTAG 8 cut(s) 437, 585, 597, 858, 971, 1172, 1424, 2013
ZrmI AGTACT 1 cut(s) 1470
Zsp2I ATGCAT 1 cut(s) 1953
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.