Rw3G021740

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
Physical Location & Seq
Reverse (-)
26364573 .. 26366904
2332 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G021740.1

Sequence Viewer

Length: 1887 bp
ATGTTTCTTATTGTTAGCTGCAGGAAAACAGCCTTTAGCATCTTCATTTTCATCAATTTTCTTTCTCTCTTTGTTAATCCCCTTTCGTTCGATCTATCCCAATTCAACCCTGACACAAAGACCATACTGTATGAAGGCGACGCCACACCTAAAGGACATGTCGAACTCACCCCAGTCACTGAAATGCTCCGCGTAGGGCGGTTTACTCATACAGAGCCTTTCCATCTGTGGAACTCTGCTACCCGGTCAGTAGCACACTTCAGTACCCATTTCACTTTCCTGATCGATACTAATGGAAAAAAAAATTACTCTGATGGATTTGCTTTTTTCATTGCTCCTGTTGGCTATCCAATTCCACCCAACTCTGCTGGTAGTGTTCTTGGACTATTCAATAGCACCACTGCATTGTCCCATAACCAAATTGTCATGGTTGAGTTTGATACATTCCAAGATGAGTGGGATCCCCCGAGACCCCATGTTGGGATCAATGTAAATAATATCTCATCAGCCATTACCGCCAGCTTGGATTTCAACAGCACCAAGGTAGTTAAGGCATGGATAACTTACAATGCTACCACAAAGATCCTCAGTGTTCTTTGGACTGACGAGGACACCCTAAATCCTAGTACTACTCCTCTTTCTCACCAAATCGAATTCCCCAATATTTTGCCAGAATTTGTTACAGTTGGGTTTTCAGGTGCTACCGGAAGACACATTGAGAACCATATAATAACATCATGGGAATTCAATTCCAAGTTGGATTCTGATGAGGTGAATAATATAGGAAAATGGAAGACATTCTTGATAGTGGCAGTCACTGCTATTCCTTTGTTTATTTTGGTACTTGGTGTGGCCTTGTGTTGGTTCTTGGTAAACAGGCAGATAAATAAGAATATTGAAGGACATGAATACCACTTCAATGCTGCAGTGCCTTCTGTAACTAGGGATCTCGAGAGACTATCCTTGCCAGGACGATTTTCTTATCAAGAATTAGTTGCAGCCACCATTGGTTTTGCAAATGATAGAAGGCTAGGCCAAGGAGGCTCGGGACAGGTATATAGAGGAGTCATACCAGATCTTGGCTGTGTGGTTGCTGTGAAGAGAATCTTTGCTGAATCTGAGCACCAGGAGAAAATTTTCATCAATGAAGTGAAAATCATAAGCCGCTTAATACATAAAAACCTGGTGCAGTTCATTGGATGGTGTCATGAGCAAGGTGAATGTTTACTTGTTTATGCATACATGCCGAATAGCAGCCTTGATGCTCATCTCTTTGGCAGTAGAGCAACCTTGCAATGGGATTTCCGGTACAAGATAGCCTTAGGCTTAGCTTCGGCCCTTCATTATCTACATGAAGATGCAGAGCAATGTGTCCTTCACAGGGATATTAAATCAGCTAACATATTGTTAGACAACGATTTTAGCACTAAGCTTGGAGATTTTGGGATTGCTAAGCTTGTAGATGCGCGGTTGAGGACTAGGGCAACAGGGGTGGCAGGGACTTTCGGCTACATGGCCCCAGAATATGCTTTTCAAGGGAGGGCCAGCAAAGAGTCGGACATGTTTAGTTTTGGAGTTGTAGCCTTGGAGATTGCTTGTGGAAGGCAGACTTATTACGAAGGAGAATATCACATGCCACTTTTCGAGTGGGTTTGGCAGTTTTACCTTGCAGGAAATGTTCTCAAGGCAGCTGACGAGAGATTGGATATGAAATATGATCCAAGTGAAATGGAATGCTTGTTAATCGTGGGATTATGGTGCACTCACCTCAATTGTAAGGAGAGACCAAAAGCAGGACAAGTGATGAAGGTTCTGTTGCTTGAAGCGCCATGGCCACAACTTCCACGTGATAGGCATACGCATCATCATGGTCTATATGAACAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

628

Amino Acids

70.9

Weight (kDa)

6.08

Isoelectric Point (pI)

37.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 28 - 259 6.3e-65 Legume lectin domain
Pkinase PF00069 339 - 603 6.5e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 341 - 540 1.2e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1079
AccII CGCG 2 cut(s) 192, 1468
AciI CCGC 5 cut(s) 190, 199, 516, 1165, 1468
AclWI GGATC 6 cut(s) 455, 468, 491, 577, 954, 1712
AcoI YGGCCR 1 cut(s) 1832
AcsI RAATTY 4 cut(s) 653, 674, 743, 1134
AcuI CTGAAG 1 cut(s) 244
AcvI CACGTG 1 cut(s) 1847
AcyI GRCGYC 1 cut(s) 141
AfaI GTAC 4 cut(s) 265, 628, 843, 1310
AfiI CCNNNNNNNGG 7 cut(s) 479, 480, 861, 1079, 1296, 1381, 1793
AflIII ACRYGT 2 cut(s) 157, 1560
AgsI TTSAA 8 cut(s) 106, 391, 532, 748, 899, 919, 1535, 1823
AjnI CCWGG 3 cut(s) 967, 1125, 1182
AluBI AGCT 7 cut(s) 18, 522, 1331, 1397, 1432, 1456, 1691
AluI AGCT 7 cut(s) 18, 522, 1331, 1397, 1432, 1456, 1691
Alw21I GWGCWC 2 cut(s) 1125, 1763
Alw26I GTCTC 3 cut(s) 463, 949, 1777
Alw44I GTGCAC 1 cut(s) 1759
AlwI GGATC 6 cut(s) 455, 468, 491, 577, 954, 1712
AlwNI CAGNNNCTG 2 cut(s) 179, 818
Ama87I CYCGRG 3 cut(s) 466, 950, 1045
AoxI GGCC 6 cut(s) 852, 1033, 1335, 1515, 1542, 1832
ApaLI GTGCAC 1 cut(s) 1759
ApeKI GCWGC 5 cut(s) 18, 923, 998, 1254, 1688
ApoI RAATTY 4 cut(s) 653, 674, 743, 1134
Asp700I GAANNNNTTC 2 cut(s) 797, 1136
AspLEI GCGC 2 cut(s) 1468, 1828
AspS9I GGNCC 3 cut(s) 1336, 1516, 1542
AsuC2I CCSGG 1 cut(s) 244
AsuHPI GGTGA 5 cut(s) 160, 635, 784, 1229, 1757
AvaI CYCGRG 3 cut(s) 466, 950, 1045
AxyI CCTNAGG 1 cut(s) 1321
BaeGI GKGCMC 1 cut(s) 1763
BaeI ACNNNNGTAYC 2 cut(s) 247, 280
BalI TGGCCA 1 cut(s) 1834
BamHI GGATCC 1 cut(s) 460
BbrPI CACGTG 1 cut(s) 1847
BbsI GAAGAC 2 cut(s) 715, 800
Bbv12I GWGCWC 2 cut(s) 1125, 1763
BbvI GCAGC 5 cut(s) 5, 910, 1010, 1266, 1700
BccI CCATC 3 cut(s) 231, 308, 1194
BciT130I CCWGG 3 cut(s) 969, 1127, 1184
BcnI CCSGG 1 cut(s) 244
BcoDI GTCTC 3 cut(s) 463, 949, 1777
BfaI CTAG 4 cut(s) 624, 942, 1031, 1479
BfmI CTRYAG 2 cut(s) 19, 924
BfoI RGCGCY 1 cut(s) 1829
BglI GCCNNNNNGGC 1 cut(s) 1041
BglII AGATCT 1 cut(s) 1075
BisI GCNGC 6 cut(s) 19, 924, 999, 1165, 1255, 1689
BlpI GCTNAGC 2 cut(s) 1327, 1452
BlsI GCNGC 6 cut(s) 20, 925, 1000, 1166, 1256, 1690
BmcAI AGTACT 1 cut(s) 628
Bme1390I CCNGG 4 cut(s) 244, 969, 1127, 1184
BmeT110I CYCGRG 3 cut(s) 466, 950, 1045
BmgT120I GGNCC 3 cut(s) 1336, 1516, 1542
BmiI GGNNCC 2 cut(s) 462, 1518
BmrFI CCNGG 4 cut(s) 244, 969, 1127, 1184
BmrI ACTGGG 1 cut(s) 167
BmsI GCATC 5 cut(s) 48, 1252, 1348, 1453, 1870
BmuI ACTGGG 1 cut(s) 167
BpiI GAAGAC 2 cut(s) 715, 800
Bpu1102I GCTNAGC 2 cut(s) 1327, 1452
BpuEI CTTGAG 1 cut(s) 1667
BpuMI CCSGG 1 cut(s) 244
Bsa29I ATCGAT 1 cut(s) 285
BsaAI YACGTR 1 cut(s) 1847
BsaBI GATNNNNATC 1 cut(s) 1266
BsaHI GRCGYC 1 cut(s) 141
BsaI GGTCTC 2 cut(s) 463, 1777
BsaJI CCNNGG 4 cut(s) 540, 1036, 1584, 1829
BsaWI WCCGGW 2 cut(s) 704, 1305
Bsc4I CCNNNNNNNGG 7 cut(s) 479, 480, 861, 1079, 1296, 1381, 1793
Bse1I ACTGG 1 cut(s) 173
Bse21I CCTNAGG 1 cut(s) 1321
Bse3DI GCAATG 3 cut(s) 330, 1301, 1373
Bse8I GATNNNNATC 1 cut(s) 1266
BseBI CCWGG 3 cut(s) 969, 1127, 1184
BseCI ATCGAT 1 cut(s) 285
BseDI CCNNGG 4 cut(s) 540, 1036, 1584, 1829
BseGI GGATG 1 cut(s) 1205
BseJI GATNNNNATC 1 cut(s) 1266
BseLI CCNNNNNNNGG 7 cut(s) 479, 480, 861, 1079, 1296, 1381, 1793
BseMI GCAATG 3 cut(s) 330, 1301, 1373
BseMII CTCAG 2 cut(s) 601, 1110
BseNI ACTGG 1 cut(s) 173
BseRI GAGGAG 2 cut(s) 624, 1077
BseSI GKGCMC 1 cut(s) 1763
BseXI GCAGC 5 cut(s) 5, 910, 1010, 1266, 1700
BsgI GTGCAG 1 cut(s) 1208
Bsh1236I CGCG 2 cut(s) 192, 1468
BshFI GGCC 6 cut(s) 854, 1035, 1337, 1517, 1544, 1834
BshVI ATCGAT 1 cut(s) 285
BsiHKAI GWGCWC 2 cut(s) 1125, 1763
BsiHKCI CYCGRG 3 cut(s) 466, 950, 1045
BsiSI CCGG 3 cut(s) 244, 705, 1306
BslFI GGGAC 3 cut(s) 394, 1062, 1513
BslI CCNNNNNNNGG 7 cut(s) 479, 480, 861, 1079, 1296, 1381, 1793
BsmAI GTCTC 3 cut(s) 463, 949, 1777
BsmFI GGGAC 3 cut(s) 394, 1062, 1513
BsmI GAATGC 1 cut(s) 1739
BsnI GGCC 6 cut(s) 854, 1035, 1337, 1517, 1544, 1834
Bso31I GGTCTC 2 cut(s) 463, 1777
BsoBI CYCGRG 3 cut(s) 466, 950, 1045
Bsp1286I GDGCHC 2 cut(s) 1125, 1763
Bsp143I GATC 8 cut(s) 91, 282, 460, 483, 582, 946, 1075, 1717
Bsp1720I GCTNAGC 2 cut(s) 1327, 1452
Bsp19I CCATGG 1 cut(s) 1829
BspACI CCGC 5 cut(s) 190, 199, 516, 1165, 1468
BspANI GGCC 6 cut(s) 854, 1035, 1337, 1517, 1544, 1834
BspCNI CTCAG 2 cut(s) 600, 1111
BspDI ATCGAT 1 cut(s) 285
BspFNI CGCG 2 cut(s) 192, 1468
BspHI TCATGA 1 cut(s) 1207
BspLI GGNNCC 2 cut(s) 462, 1518
BspMAI CTGCAG 2 cut(s) 23, 928
BspPI GGATC 6 cut(s) 455, 468, 491, 577, 954, 1712
BspTNI GGTCTC 2 cut(s) 463, 1777
BsrDI GCAATG 3 cut(s) 330, 1301, 1373
BsrI ACTGG 1 cut(s) 173
BssECI CCNNGG 4 cut(s) 540, 1036, 1584, 1829
BssMI GATC 8 cut(s) 91, 282, 460, 483, 582, 946, 1075, 1717
BssNI GRCGYC 1 cut(s) 141
BssT1I CCWWGG 4 cut(s) 540, 1036, 1584, 1829
Bst2UI CCWGG 3 cut(s) 969, 1127, 1184
Bst4CI ACNGT 2 cut(s) 129, 685
Bst6I CTCTTC 1 cut(s) 1094
BstACI GRCGYC 1 cut(s) 141
BstAPI GCANNNNNTGC 1 cut(s) 818
BstBAI YACGTR 1 cut(s) 1847
BstC8I GCNNGC 2 cut(s) 520, 1546
BstDEI CTNAG 6 cut(s) 587, 1119, 1321, 1327, 1428, 1452
BstDSI CCRYGG 1 cut(s) 1829
BstF5I GGATG 1 cut(s) 1205
BstFNI CGCG 2 cut(s) 192, 1468
BstH2I RGCGCY 1 cut(s) 1829
BstHHI GCGC 2 cut(s) 1468, 1828
BstKTI GATC 8 cut(s) 94, 285, 463, 486, 585, 949, 1078, 1720
BstMAI GTCTC 3 cut(s) 463, 949, 1777
BstMBI GATC 8 cut(s) 91, 282, 460, 483, 582, 946, 1075, 1717
BstMWI GCNNNNNNNGC 4 cut(s) 515, 818, 1041, 1825
BstNI CCWGG 3 cut(s) 969, 1127, 1184
BstNSI RCATGY 4 cut(s) 161, 1246, 1564, 1636
BstSCI CCNGG 4 cut(s) 242, 967, 1125, 1182
BstSFI CTRYAG 2 cut(s) 19, 924
BstSLI GKGCMC 1 cut(s) 1763
BstUI CGCG 2 cut(s) 192, 1468
BstV1I GCAGC 5 cut(s) 5, 910, 1010, 1266, 1700
BstV2I GAAGAC 2 cut(s) 715, 800
BstX2I RGATCY 4 cut(s) 460, 582, 946, 1075
BstYI RGATCY 4 cut(s) 460, 582, 946, 1075
Bsu15I ATCGAT 1 cut(s) 285
Bsu36I CCTNAGG 1 cut(s) 1321
BsuRI GGCC 6 cut(s) 854, 1035, 1337, 1517, 1544, 1834
BsuTUI ATCGAT 1 cut(s) 285
BtgI CCRYGG 1 cut(s) 1829
BtsCI GGATG 1 cut(s) 1205
BtsI GCAGTG 3 cut(s) 399, 816, 933
BtsIMutI CAGTG 5 cut(s) 177, 399, 595, 816, 933
Cac8I GCNNGC 2 cut(s) 520, 1546
CaiI CAGNNNCTG 2 cut(s) 179, 818
CciI TCATGA 1 cut(s) 1207
CfoI GCGC 2 cut(s) 1468, 1828
Cfr13I GGNCC 3 cut(s) 1336, 1516, 1542
ClaI ATCGAT 1 cut(s) 285
CseI GACGC 1 cut(s) 149
CsiI ACCWGGT 1 cut(s) 1182
Csp6I GTAC 4 cut(s) 264, 627, 842, 1309
CspCI CAANNNNNGTGG 4 cut(s) 437, 472, 1473, 1508
CviQI GTAC 4 cut(s) 264, 627, 842, 1309
DdeI CTNAG 6 cut(s) 587, 1119, 1321, 1327, 1428, 1452
DpnI GATC 8 cut(s) 93, 284, 462, 485, 584, 948, 1077, 1719
DpnII GATC 8 cut(s) 91, 282, 460, 483, 582, 946, 1075, 1717
EaeI YGGCCR 1 cut(s) 1832
Eam1104I CTCTTC 1 cut(s) 1094
EarI CTCTTC 1 cut(s) 1094
Eco130I CCWWGG 4 cut(s) 540, 1036, 1584, 1829
Eco31I GGTCTC 2 cut(s) 463, 1777
Eco57I CTGAAG 1 cut(s) 244
Eco72I CACGTG 1 cut(s) 1847
Eco81I CCTNAGG 1 cut(s) 1321
Eco88I CYCGRG 3 cut(s) 466, 950, 1045
EcoRI GAATTC 2 cut(s) 653, 743
EcoRII CCWGG 3 cut(s) 967, 1125, 1182
EcoT14I CCWWGG 4 cut(s) 540, 1036, 1584, 1829
EcoT22I ATGCAT 1 cut(s) 1240
ErhI CCWWGG 4 cut(s) 540, 1036, 1584, 1829
FalI AAGNNNNNCTT 8 cut(s) 785, 817, 1091, 1123, 1304, 1336, 1594, 1626
FaqI GGGAC 3 cut(s) 394, 1062, 1513
Fnu4HI GCNGC 6 cut(s) 19, 924, 999, 1165, 1255, 1689
FokI GGATG 1 cut(s) 1212
Fsp4HI GCNGC 6 cut(s) 19, 924, 999, 1165, 1255, 1689
FspBI CTAG 4 cut(s) 624, 942, 1031, 1479
GlaI GCGC 2 cut(s) 1467, 1827
GluI GCNGC 6 cut(s) 19, 924, 999, 1165, 1255, 1689
HaeII RGCGCY 1 cut(s) 1829
HaeIII GGCC 6 cut(s) 854, 1035, 1337, 1517, 1544, 1834
HapII CCGG 3 cut(s) 244, 705, 1306
HgaI GACGC 1 cut(s) 149
HhaI GCGC 2 cut(s) 1468, 1828
Hin1I GRCGYC 1 cut(s) 141
Hin6I GCGC 2 cut(s) 1466, 1826
HinP1I GCGC 2 cut(s) 1466, 1826
HindIII AAGCTT 2 cut(s) 1430, 1454
HinfI GANTC 5 cut(s) 761, 1065, 1104, 1115, 1553
HpaII CCGG 3 cut(s) 244, 705, 1306
HphI GGTGA 5 cut(s) 160, 635, 784, 1229, 1757
Hpy166II GTNNAC 4 cut(s) 204, 874, 1226, 1761
Hpy188I TCNGA 4 cut(s) 313, 766, 1120, 1558
Hpy188III TCNNGA 7 cut(s) 280, 802, 950, 952, 986, 1047, 1208
Hpy8I GTNNAC 4 cut(s) 204, 874, 1226, 1761
Hpy99I CGWCG 1 cut(s) 143
HpyAV CCTTC 9 cut(s) 128, 893, 942, 1020, 1349, 1385, 1596, 1613, 1801
HpyCH4III ACNGT 2 cut(s) 129, 685
HpyCH4IV ACGT 1 cut(s) 1846
HpyF10VI GCNNNNNNNGC 4 cut(s) 515, 818, 1041, 1825
HpyF3I CTNAG 6 cut(s) 587, 1119, 1321, 1327, 1428, 1452
HpySE526I ACGT 1 cut(s) 1846
Hsp92I GRCGYC 1 cut(s) 141
HspAI GCGC 2 cut(s) 1466, 1826
Kzo9I GATC 8 cut(s) 91, 282, 460, 483, 582, 946, 1075, 1717
LmnI GCTCC 2 cut(s) 192, 340
Lsp1109I GCAGC 5 cut(s) 5, 910, 1010, 1266, 1700
LweI GCATC 5 cut(s) 48, 1252, 1348, 1453, 1870
MabI ACCWGGT 1 cut(s) 1182
MaeI CTAG 4 cut(s) 624, 942, 1031, 1479
MaeII ACGT 1 cut(s) 1846
MaeIII GTNAC 4 cut(s) 175, 679, 814, 937
MalI GATC 8 cut(s) 93, 284, 462, 485, 584, 948, 1077, 1719
MboI GATC 8 cut(s) 91, 282, 460, 483, 582, 946, 1075, 1717
MboII GAAGA 5 cut(s) 34, 720, 805, 1111, 1367
MfeI CAATTG 1 cut(s) 1771
MflI RGATCY 4 cut(s) 460, 582, 946, 1075
MhlI GDGCHC 2 cut(s) 1125, 1763
MlsI TGGCCA 1 cut(s) 1834
MluNI TGGCCA 1 cut(s) 1834
MlyI GAGTC 2 cut(s) 1074, 1562
MmeI TCCRAC 2 cut(s) 738, 1536
MnlI CCTC 9 cut(s) 596, 601, 645, 763, 1034, 1055, 1467, 1533, 1778
Mox20I TGGCCA 1 cut(s) 1834
Mph1103I ATGCAT 1 cut(s) 1240
MroXI GAANNNNTTC 2 cut(s) 797, 1136
MscI TGGCCA 1 cut(s) 1834
MseI TTAA 5 cut(s) 75, 549, 1169, 1389, 1742
MslI CAYNNNNRTG 4 cut(s) 182, 918, 1356, 1866
Msp20I TGGCCA 1 cut(s) 1834
MspA1I CMGCKG 1 cut(s) 1691
MspI CCGG 3 cut(s) 244, 705, 1306
MspR9I CCNGG 4 cut(s) 244, 969, 1127, 1184
MunI CAATTG 1 cut(s) 1771
Mva1269I GAATGC 1 cut(s) 1739
MvaI CCWGG 3 cut(s) 969, 1127, 1184
MvnI CGCG 2 cut(s) 192, 1468
MwoI GCNNNNNNNGC 4 cut(s) 515, 818, 1041, 1825
NciI CCSGG 1 cut(s) 244
NcoI CCATGG 1 cut(s) 1829
NdeII GATC 8 cut(s) 91, 282, 460, 483, 582, 946, 1075, 1717
NlaIV GGNNCC 2 cut(s) 462, 1518
NmuCI GTSAC 2 cut(s) 175, 814
NsiI ATGCAT 1 cut(s) 1240
NspI RCATGY 4 cut(s) 161, 1246, 1564, 1636
PaeR7I CTCGAG 1 cut(s) 950
PagI TCATGA 1 cut(s) 1207
PciI ACATGT 2 cut(s) 157, 1560
PctI GAATGC 1 cut(s) 1739
PdmI GAANNNNTTC 2 cut(s) 797, 1136
PfeI GAWTC 3 cut(s) 761, 1104, 1115
PflMI CCANNNNNTGG 1 cut(s) 1079
PkrI GCNGC 6 cut(s) 20, 925, 1000, 1166, 1256, 1690
PleI GAGTC 2 cut(s) 1073, 1561
PmaCI CACGTG 1 cut(s) 1847
PmlI CACGTG 1 cut(s) 1847
PpsI GAGTC 2 cut(s) 1073, 1561
Ppu21I YACGTR 1 cut(s) 1847
PscI ACATGT 2 cut(s) 157, 1560
Psp6I CCWGG 3 cut(s) 967, 1125, 1182
PspCI CACGTG 1 cut(s) 1847
PspGI CCWGG 3 cut(s) 967, 1125, 1182
PspN4I GGNNCC 2 cut(s) 462, 1518
PspPI GGNCC 3 cut(s) 1336, 1516, 1542
PstI CTGCAG 2 cut(s) 23, 928
PstNI CAGNNNCTG 2 cut(s) 179, 818
PsuI RGATCY 4 cut(s) 460, 582, 946, 1075
PvuII CAGCTG 1 cut(s) 1691
RsaI GTAC 4 cut(s) 265, 628, 843, 1310
RsaNI GTAC 4 cut(s) 264, 627, 842, 1309
RseI CAYNNNNRTG 4 cut(s) 182, 918, 1356, 1866
SaqAI TTAA 5 cut(s) 75, 549, 1169, 1389, 1742
SatI GCNGC 6 cut(s) 19, 924, 999, 1165, 1255, 1689
Sau3AI GATC 8 cut(s) 91, 282, 460, 483, 582, 946, 1075, 1717
Sau96I GGNCC 3 cut(s) 1336, 1516, 1542
ScaI AGTACT 1 cut(s) 628
SchI GAGTC 2 cut(s) 1074, 1562
ScrFI CCNGG 4 cut(s) 244, 969, 1127, 1184
SduI GDGCHC 2 cut(s) 1125, 1763
SexAI ACCWGGT 1 cut(s) 1182
SfaNI GCATC 5 cut(s) 48, 1252, 1348, 1453, 1870
SfcI CTRYAG 2 cut(s) 19, 924
Sfr274I CTCGAG 1 cut(s) 950
SlaI CTCGAG 1 cut(s) 950
SmiMI CAYNNNNRTG 4 cut(s) 182, 918, 1356, 1866
SmlI CTYRAG 2 cut(s) 950, 1682
SmoI CTYRAG 2 cut(s) 950, 1682
SsiI CCGC 5 cut(s) 190, 199, 516, 1165, 1468
SspI AATATT 2 cut(s) 664, 895
SspMI CTAG 4 cut(s) 624, 942, 1031, 1479
StyD4I CCNGG 4 cut(s) 242, 967, 1125, 1182
StyI CCWWGG 4 cut(s) 540, 1036, 1584, 1829
TaaI ACNGT 2 cut(s) 129, 685
TaiI ACGT 1 cut(s) 1849
TaqI TCGA 6 cut(s) 90, 162, 285, 651, 951, 1644
TatI WGTACW 1 cut(s) 626
TauI GCSGC 1 cut(s) 1167
TfiI GAWTC 3 cut(s) 761, 1104, 1115
Tru1I TTAA 5 cut(s) 75, 549, 1169, 1389, 1742
Tru9I TTAA 5 cut(s) 75, 549, 1169, 1389, 1742
TscAI CASTG 5 cut(s) 184, 406, 595, 823, 933
TseFI GTSAC 2 cut(s) 175, 814
TseI GCWGC 5 cut(s) 18, 923, 998, 1254, 1688
Tsp45I GTSAC 2 cut(s) 175, 814
TspRI CASTG 5 cut(s) 184, 406, 595, 823, 933
Van91I CCANNNNNTGG 1 cut(s) 1079
VneI GTGCAC 1 cut(s) 1759
XapI RAATTY 4 cut(s) 653, 674, 743, 1134
XceI RCATGY 4 cut(s) 161, 1246, 1564, 1636
XcmI CCANNNNNNNNNTGG 1 cut(s) 1644
XhoI CTCGAG 1 cut(s) 950
XmnI GAANNNNTTC 2 cut(s) 797, 1136
XspI CTAG 4 cut(s) 624, 942, 1031, 1479
ZrmI AGTACT 1 cut(s) 628
Zsp2I ATGCAT 1 cut(s) 1240
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.