Rh2DG236900

Lectin-domain containing receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
23617900 .. 23651607
33708 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG236900.1

Sequence Viewer

Length: 1881 bp
ATGGCCACCGCTCTCATCAACATATCATCAGTACCTATCAATATCCTCATTCTGCTCTTCATTCTGCCTTCAGCTTGCTCAACTAATTTCAAAATAGCACGATTTGATGCAACTGCAGCCAACATAGTCTATGAGGGAGATGCAGTCCCTTCTGTGGGAGTCATTGAACTCATTGACAAAGTCAACTATGTTTGCCGCGTTGGCAGGGCCACCTATGCTGAGAGAGTTCCATTATGGGACTCTCATGCTGGGAAGGCTGCTGACTTCACAACCCATTTCTCATTCATCGTTGACACACAAGGCGCAGCTACTTATGGCAGTGGATTCGGATTCTTTCTCGCTCCTTTTGGATTTCAAATCCCGCTGAATTCAGCTGGTGGATTTCTTGGTCTATTTAACACCACAACCAGTGACTTTGCTGGGAACCATATTGTTCTAGTTGAGTTTGATTCCTACGTAAACCCTGACTGGGATCCTGCATATCAGCATGTGGGGATCAACAACAACTCAATTGCTTCCGTTGTGACGACCCCTTGGAATGTTAGCTTACACGATGGAGACACTACTGATGTGTGGATTTCCTACAATGCTACAACAACAAGTCTAAGTGTTCAGTGGAGCTACCAAAATACCCCTGCTTCAGCAGAGGAGACAACTAGCATCTCTTACCAAATTGATCTTATGGAAGTCCTGCCTGAGTGGATCATAATTGGATTTTCAGCTGGTACTAGTCAATATATGGAGCGAAATAAGATTGTCTCATGGGAATTCAACTCAACTCTGGATAGAAAATATCCTGGTTCAAGTACCGGAAAACATGCAAAGAAGATGATGATGATAATTGTAATTACACTACTAGCAGTTTCAGTGGTTTCTCTGATAGTTGGGATGATTACAGCAAAAACTCTGGGGTTGTGTCGTTCCCGGTTGAAGAAAACAGAGAAAAAAGAAGAGGAGATAGAAGTACCTGCAGTAATAGCCACTGGAAACTTAGCACCAATCATTGAAGAAAATAGTGAAGGAGAAGCAGGACAGCATGTGGGGATCAACAAAAACTCAATTTCTTCTGTTGCGAGCACGCCTTGGAATGTTAGCTTACACGATGGAGACACTACTGATGTATGGATCACCTACAGTGCTACAACAACCACACTCAGTGTCAATTGGAGCTACCGAACTACCCCTGCTTCTGCAGAGGAGACAACTAGTCTTTCATACCAAATTGATCTGGCAAAAGTCCTGCCTGAGTGGGTCACAGTTGGATTTTCAGCTGGTACTGGTGGAGACGCTGGGACACGAAATCAGATTGAATCGTGGGAATTCAATTCGACTTTGGATAGGAAGTATCCCGGTCCAGGTCTCGGAAAGGGTGCAAAGAAGATCTTAGTGATAATAGCAGTACTGGTGGCAGTTTCAGTGGTTTCTCTGATTGCTGGGATGGTTGCAGCAAACATTCCGAGGTTGTACAGGTGGAGAAACAAAAAAGGAATCGTGACAGAACCAGGAGCAGAGGAAGAAAGATTGACTTCAATCAATCAAGACAGTAGTAGTGACAGAAGAGCCGGAATGAGAAGGTTCCCTTATTCAGAAATCGAAAGAGCTACAAACAACTTCTCCAAGGAGGCTATTGGAGACATGGAGACTTGGAGGCTTGGAGATATCAGCAATAGGAATGATGCCACTGGGCACCCTGCTACTGTGACTACTGGAGGGATGGTTGAGGTTTGGGGTGATATACAGCTTGCAGCACTGCGTGCACTTTTGGCATCTTTCTTGTCTTCATCTCGTGTCCGCCCCCCTTACTTAGCTCAGGGTGTTGATCTTTTCTGTAGAGGGCAGCTTCCATACCAAAAAGCAAGGGTGGTACATTTCTTCAAATGA

Protein Analysis

626

Amino Acids

68.23

Weight (kDa)

5.6

Isoelectric Point (pI)

32.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 28 - 263 2.1e-66 Legume lectin domain
Lectin_legB PF00139 343 - 446 6.9e-27 Legume lectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 976
AccB1I GGYRCC 1 cut(s) 1686
AccBSI CCGCTC 1 cut(s) 11
AccII CGCG 1 cut(s) 198
AciI CCGC 4 cut(s) 9, 196, 362, 1792
AclWI GGATC 6 cut(s) 467, 480, 503, 710, 1052, 1133
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 3 cut(s) 367, 767, 1319
AcuI CTGAAG 2 cut(s) 54, 624
AdeI CACNNNGTG 2 cut(s) 1157, 1754
AfaI GTAC 8 cut(s) 33, 727, 808, 966, 1276, 1401, 1466, 1866
AfiI CCNNNNNNNGG 5 cut(s) 154, 155, 469, 1355, 1361
AhdI GACNNNNNGTC 1 cut(s) 1206
AhlI ACTAGT 2 cut(s) 728, 1205
AjnI CCWGG 3 cut(s) 796, 1354, 1501
Alw21I GWGCWC 2 cut(s) 1079, 1759
Alw26I GTCTC 9 cut(s) 552, 644, 763, 1101, 1193, 1278, 1364, 1626, 1634
Alw44I GTGCAC 1 cut(s) 1755
AlwI GGATC 6 cut(s) 467, 480, 503, 710, 1052, 1133
AoxI GGCC 2 cut(s) 3, 207
ApaLI GTGCAC 1 cut(s) 1755
ApeKI GCWGC 6 cut(s) 116, 257, 305, 1445, 1745, 1837
ApoI RAATTY 3 cut(s) 367, 767, 1319
AspLEI GCGC 1 cut(s) 305
AspS9I GGNCC 2 cut(s) 207, 1352
AsuC2I CCSGG 2 cut(s) 925, 1350
AsuHPI GGTGA 2 cut(s) 1120, 1742
AvaII GGWCC 1 cut(s) 1352
BaeGI GKGCMC 2 cut(s) 1689, 1759
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 472
BanI GGYRCC 1 cut(s) 1686
BauI CACGAG 1 cut(s) 1785
BbsI GAAGAC 1 cut(s) 1770
Bbv12I GWGCWC 2 cut(s) 1079, 1759
BbvI GCAGC 6 cut(s) 128, 244, 317, 1457, 1757, 1849
BccI CCATC 4 cut(s) 548, 1097, 1432, 1708
BcgI CGANNNNNNTGC 2 cut(s) 307, 341
BciT130I CCWGG 3 cut(s) 798, 1356, 1503
BciVI GTATCC 1 cut(s) 1356
BcnI CCSGG 2 cut(s) 925, 1350
BcoDI GTCTC 9 cut(s) 552, 644, 763, 1101, 1193, 1278, 1364, 1626, 1634
BcuI ACTAGT 2 cut(s) 728, 1205
BfaI CTAG 5 cut(s) 437, 657, 729, 857, 1206
BfmI CTRYAG 5 cut(s) 114, 969, 1132, 1191, 1828
BfuAI ACCTGC 1 cut(s) 976
BfuI GTATCC 1 cut(s) 1356
BglI GCCNNNNNGGC 1 cut(s) 201
BglII AGATCT 1 cut(s) 1380
BisI GCNGC 7 cut(s) 117, 196, 258, 306, 1446, 1746, 1838
BlsI GCNGC 7 cut(s) 118, 197, 259, 307, 1447, 1747, 1839
BmcAI AGTACT 1 cut(s) 1401
Bme1390I CCNGG 5 cut(s) 798, 925, 1350, 1356, 1503
Bme18I GGWCC 1 cut(s) 1352
BmeRI GACNNNNNGTC 1 cut(s) 1206
BmgT120I GGNCC 2 cut(s) 207, 1352
BmiI GGNNCC 4 cut(s) 425, 474, 1577, 1688
BmrFI CCNGG 5 cut(s) 798, 925, 1350, 1356, 1503
BmrI ACTGGG 2 cut(s) 478, 1692
BmsI GCATC 5 cut(s) 97, 130, 669, 1666, 1775
BmuI ACTGGG 2 cut(s) 478, 1692
BpiI GAAGAC 1 cut(s) 1770
BpmI CTGGAG 1 cut(s) 1728
Bpu10I CCTNAGC 1 cut(s) 1809
BpuMI CCSGG 2 cut(s) 925, 1350
BsaAI YACGTR 1 cut(s) 457
BsaI GGTCTC 1 cut(s) 1364
BsaJI CCNNGG 4 cut(s) 533, 1082, 1457, 1617
BsaWI WCCGGW 1 cut(s) 809
BsaXI ACNNNNNCTCC 6 cut(s) 129, 159, 1598, 1628, 1701, 1731
Bsc4I CCNNNNNNNGG 5 cut(s) 154, 155, 469, 1355, 1361
Bse1I ACTGG 7 cut(s) 408, 473, 988, 1282, 1407, 1687, 1711
BseBI CCWGG 3 cut(s) 798, 1356, 1503
BseDI CCNNGG 4 cut(s) 533, 1082, 1457, 1617
BseGI GGATG 3 cut(s) 894, 1443, 1719
BseLI CCNNNNNNNGG 5 cut(s) 154, 155, 469, 1355, 1361
BseMII CTCAG 5 cut(s) 210, 687, 1168, 1236, 1823
BseNI ACTGG 7 cut(s) 408, 473, 988, 1282, 1407, 1687, 1711
BseRI GAGGAG 3 cut(s) 662, 968, 1211
BseSI GKGCMC 2 cut(s) 1689, 1759
BseXI GCAGC 6 cut(s) 128, 244, 317, 1457, 1757, 1849
BseYI CCCAGC 4 cut(s) 248, 419, 1289, 1433
Bsh1236I CGCG 1 cut(s) 198
BshFI GGCC 2 cut(s) 5, 209
BshNI GGYRCC 1 cut(s) 1686
BsiHKAI GWGCWC 2 cut(s) 1079, 1759
BsiSI CCGG 4 cut(s) 810, 925, 1350, 1563
BslFI GGGAC 3 cut(s) 131, 251, 1306
BslI CCNNNNNNNGG 5 cut(s) 154, 155, 469, 1355, 1361
BsmAI GTCTC 9 cut(s) 552, 644, 763, 1101, 1193, 1278, 1364, 1626, 1634
BsmBI CGTCTC 1 cut(s) 1278
BsmFI GGGAC 3 cut(s) 131, 251, 1306
BsnI GGCC 2 cut(s) 5, 209
Bso31I GGTCTC 1 cut(s) 1364
Bsp1286I GDGCHC 3 cut(s) 1079, 1689, 1759
Bsp1407I TGTACA 1 cut(s) 1464
Bsp143I GATC 9 cut(s) 472, 495, 676, 702, 1044, 1125, 1225, 1380, 1819
BspACI CCGC 4 cut(s) 9, 196, 362, 1792
BspANI GGCC 2 cut(s) 5, 209
BspCNI CTCAG 5 cut(s) 211, 688, 1167, 1237, 1822
BspFNI CGCG 1 cut(s) 198
BspLI GGNNCC 4 cut(s) 425, 474, 1577, 1688
BspMAI CTGCAG 3 cut(s) 118, 973, 1195
BspMI ACCTGC 1 cut(s) 976
BspPI GGATC 6 cut(s) 467, 480, 503, 710, 1052, 1133
BspQI GCTCTTC 2 cut(s) 62, 1552
BspT107I GGYRCC 1 cut(s) 1686
BspTNI GGTCTC 1 cut(s) 1364
BsrBI CCGCTC 1 cut(s) 11
BsrGI TGTACA 1 cut(s) 1464
BsrI ACTGG 7 cut(s) 408, 473, 988, 1282, 1407, 1687, 1711
BssECI CCNNGG 4 cut(s) 533, 1082, 1457, 1617
BssMI GATC 9 cut(s) 472, 495, 676, 702, 1044, 1125, 1225, 1380, 1819
BssSI CACGAG 1 cut(s) 1785
BssT1I CCWWGG 3 cut(s) 533, 1082, 1617
Bst2BI CACGAG 1 cut(s) 1785
Bst2UI CCWGG 3 cut(s) 798, 1356, 1503
Bst4CI ACNGT 4 cut(s) 1136, 1258, 1544, 1699
Bst6I CTCTTC 3 cut(s) 62, 945, 1552
BstAPI GCANNNNNTGC 1 cut(s) 1754
BstAUI TGTACA 1 cut(s) 1464
BstBAI YACGTR 1 cut(s) 457
BstC8I GCNNGC 5 cut(s) 76, 1075, 1079, 1743, 1755
BstDEI CTNAG 9 cut(s) 219, 605, 696, 991, 1154, 1245, 1384, 1804, 1809
BstF5I GGATG 3 cut(s) 894, 1443, 1719
BstFNI CGCG 1 cut(s) 198
BstHHI GCGC 1 cut(s) 305
BstKTI GATC 9 cut(s) 475, 498, 679, 705, 1047, 1128, 1228, 1383, 1822
BstMAI GTCTC 9 cut(s) 552, 644, 763, 1101, 1193, 1278, 1364, 1626, 1634
BstMBI GATC 9 cut(s) 472, 495, 676, 702, 1044, 1125, 1225, 1380, 1819
BstMWI GCNNNNNNNGC 7 cut(s) 116, 201, 215, 254, 977, 1754, 1763
BstNI CCWGG 3 cut(s) 798, 1356, 1503
BstNSI RCATGY 3 cut(s) 491, 821, 1040
BstSCI CCNGG 5 cut(s) 796, 923, 1348, 1354, 1501
BstSFI CTRYAG 5 cut(s) 114, 969, 1132, 1191, 1828
BstSLI GKGCMC 2 cut(s) 1689, 1759
BstSNI TACGTA 1 cut(s) 457
BstUI CGCG 1 cut(s) 198
BstV1I GCAGC 6 cut(s) 128, 244, 317, 1457, 1757, 1849
BstV2I GAAGAC 1 cut(s) 1770
BstX2I RGATCY 2 cut(s) 472, 1380
BstYI RGATCY 2 cut(s) 472, 1380
BsuI GTATCC 1 cut(s) 1356
BsuRI GGCC 2 cut(s) 5, 209
BtsCI GGATG 3 cut(s) 894, 1443, 1719
BtsI GCAGTG 2 cut(s) 325, 1748
BveI ACCTGC 1 cut(s) 976
Cac8I GCNNGC 5 cut(s) 76, 1075, 1079, 1743, 1755
CfoI GCGC 1 cut(s) 305
Cfr13I GGNCC 2 cut(s) 207, 1352
CseI GACGC 1 cut(s) 1295
Csp6I GTAC 8 cut(s) 32, 726, 807, 965, 1275, 1400, 1465, 1865
CviAII CATG 6 cut(s) 245, 488, 762, 818, 1037, 1636
CviQI GTAC 8 cut(s) 32, 726, 807, 965, 1275, 1400, 1465, 1865
DdeI CTNAG 9 cut(s) 219, 605, 696, 991, 1154, 1245, 1384, 1804, 1809
DpnI GATC 9 cut(s) 474, 497, 678, 704, 1046, 1127, 1227, 1382, 1821
DpnII GATC 9 cut(s) 472, 495, 676, 702, 1044, 1125, 1225, 1380, 1819
DraIII CACNNNGTG 2 cut(s) 1157, 1754
DriI GACNNNNNGTC 1 cut(s) 1206
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 3 cut(s) 62, 945, 1552
Eam1105I GACNNNNNGTC 1 cut(s) 1206
EarI CTCTTC 3 cut(s) 62, 945, 1552
EciI GGCGGA 1 cut(s) 1781
Eco105I TACGTA 1 cut(s) 457
Eco130I CCWWGG 3 cut(s) 533, 1082, 1617
Eco31I GGTCTC 1 cut(s) 1364
Eco32I GATATC 1 cut(s) 1660
Eco47I GGWCC 1 cut(s) 1352
Eco57I CTGAAG 2 cut(s) 54, 624
EcoRI GAATTC 3 cut(s) 367, 767, 1319
EcoRII CCWGG 3 cut(s) 796, 1354, 1501
EcoRV GATATC 1 cut(s) 1660
EcoT14I CCWWGG 3 cut(s) 533, 1082, 1617
ErhI CCWWGG 3 cut(s) 533, 1082, 1617
Esp3I CGTCTC 1 cut(s) 1278
FaeI CATG 6 cut(s) 248, 491, 765, 821, 1040, 1639
FalI AAGNNNNNCTT 6 cut(s) 1367, 1399, 1510, 1542, 1564, 1596
FaqI GGGAC 3 cut(s) 131, 251, 1306
FatI CATG 6 cut(s) 244, 487, 761, 817, 1036, 1635
FauI CCCGC 1 cut(s) 369
Fnu4HI GCNGC 7 cut(s) 117, 196, 258, 306, 1446, 1746, 1838
FokI GGATG 3 cut(s) 901, 1450, 1726
Fsp4HI GCNGC 7 cut(s) 117, 196, 258, 306, 1446, 1746, 1838
FspBI CTAG 5 cut(s) 437, 657, 729, 857, 1206
GlaI GCGC 1 cut(s) 304
GluI GCNGC 7 cut(s) 117, 196, 258, 306, 1446, 1746, 1838
GsaI CCCAGC 4 cut(s) 252, 423, 1293, 1437
GsuI CTGGAG 1 cut(s) 1728
HaeIII GGCC 2 cut(s) 5, 209
HapII CCGG 4 cut(s) 810, 925, 1350, 1563
HgaI GACGC 1 cut(s) 1295
HhaI GCGC 1 cut(s) 305
Hin1II CATG 6 cut(s) 248, 491, 765, 821, 1040, 1639
Hin6I GCGC 1 cut(s) 303
HinP1I GCGC 1 cut(s) 303
HincII GTYRAC 2 cut(s) 184, 292
HindII GTYRAC 2 cut(s) 184, 292
HinfI GANTC 7 cut(s) 159, 239, 324, 330, 449, 1310, 1488
HpaII CCGG 4 cut(s) 810, 925, 1350, 1563
HphI GGTGA 2 cut(s) 1120, 1742
Hpy166II GTNNAC 4 cut(s) 184, 292, 460, 1757
Hpy188I TCNGA 7 cut(s) 329, 879, 1305, 1364, 1428, 1458, 1588
Hpy188III TCNNGA 3 cut(s) 782, 1492, 1538
Hpy8I GTNNAC 4 cut(s) 184, 292, 460, 1757
HpyAV CCTTC 5 cut(s) 78, 159, 247, 1013, 1566
HpyCH4III ACNGT 4 cut(s) 1136, 1258, 1544, 1699
HpyCH4IV ACGT 1 cut(s) 456
HpyF10VI GCNNNNNNNGC 7 cut(s) 116, 201, 215, 254, 977, 1754, 1763
HpyF3I CTNAG 9 cut(s) 219, 605, 696, 991, 1154, 1245, 1384, 1804, 1809
HpySE526I ACGT 1 cut(s) 456
Hsp92II CATG 6 cut(s) 248, 491, 765, 821, 1040, 1639
HspAI GCGC 1 cut(s) 303
Kzo9I GATC 9 cut(s) 472, 495, 676, 702, 1044, 1125, 1225, 1380, 1819
LguI GCTCTTC 2 cut(s) 62, 1552
LmnI GCTCC 5 cut(s) 346, 618, 742, 1167, 1505
Lsp1109I GCAGC 6 cut(s) 128, 244, 317, 1457, 1757, 1849
LweI GCATC 5 cut(s) 97, 130, 669, 1666, 1775
MaeI CTAG 5 cut(s) 437, 657, 729, 857, 1206
MaeII ACGT 1 cut(s) 456
MaeIII GTNAC 6 cut(s) 410, 523, 1252, 1492, 1550, 1699
MalI GATC 9 cut(s) 474, 497, 678, 704, 1046, 1127, 1227, 1382, 1821
MbiI CCGCTC 1 cut(s) 11
MboI GATC 9 cut(s) 472, 495, 676, 702, 1044, 1125, 1225, 1380, 1819
MfeI CAATTG 2 cut(s) 510, 1162
MflI RGATCY 2 cut(s) 472, 1380
MhlI GDGCHC 3 cut(s) 1079, 1689, 1759
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 2 cut(s) 168, 233
MmeI TCCRAC 1 cut(s) 1240
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 1 cut(s) 396
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 4 cut(s) 364, 374, 722, 1271
MspI CCGG 4 cut(s) 810, 925, 1350, 1563
MspR9I CCNGG 5 cut(s) 798, 925, 1350, 1356, 1503
MunI CAATTG 2 cut(s) 510, 1162
MvaI CCWGG 3 cut(s) 798, 1356, 1503
MvnI CGCG 1 cut(s) 198
MwoI GCNNNNNNNGC 7 cut(s) 116, 201, 215, 254, 977, 1754, 1763
NciI CCSGG 2 cut(s) 925, 1350
NdeII GATC 9 cut(s) 472, 495, 676, 702, 1044, 1125, 1225, 1380, 1819
NlaIII CATG 6 cut(s) 248, 491, 765, 821, 1040, 1639
NlaIV GGNNCC 4 cut(s) 425, 474, 1577, 1688
NmuCI GTSAC 6 cut(s) 410, 523, 1252, 1492, 1550, 1699
NspI RCATGY 3 cut(s) 491, 821, 1040
PciSI GCTCTTC 2 cut(s) 62, 1552
PfeI GAWTC 5 cut(s) 324, 330, 449, 1310, 1488
PflFI GACNNNGTC 1 cut(s) 179
PkrI GCNGC 7 cut(s) 118, 197, 259, 307, 1447, 1747, 1839
PleI GAGTC 2 cut(s) 167, 233
PpsI GAGTC 2 cut(s) 167, 233
Ppu21I YACGTR 1 cut(s) 457
Psp6I CCWGG 3 cut(s) 796, 1354, 1501
PspFI CCCAGC 4 cut(s) 248, 419, 1289, 1433
PspGI CCWGG 3 cut(s) 796, 1354, 1501
PspN4I GGNNCC 4 cut(s) 425, 474, 1577, 1688
PspPI GGNCC 2 cut(s) 207, 1352
PstI CTGCAG 3 cut(s) 118, 973, 1195
PsuI RGATCY 2 cut(s) 472, 1380
PsyI GACNNNGTC 1 cut(s) 179
PvuII CAGCTG 3 cut(s) 374, 722, 1271
RsaI GTAC 8 cut(s) 33, 727, 808, 966, 1276, 1401, 1466, 1866
RsaNI GTAC 8 cut(s) 32, 726, 807, 965, 1275, 1400, 1465, 1865
SapI GCTCTTC 2 cut(s) 62, 1552
SaqAI TTAA 1 cut(s) 396
SatI GCNGC 7 cut(s) 117, 196, 258, 306, 1446, 1746, 1838
Sau3AI GATC 9 cut(s) 472, 495, 676, 702, 1044, 1125, 1225, 1380, 1819
Sau96I GGNCC 2 cut(s) 207, 1352
ScaI AGTACT 1 cut(s) 1401
SchI GAGTC 2 cut(s) 168, 233
ScrFI CCNGG 5 cut(s) 798, 925, 1350, 1356, 1503
SduI GDGCHC 3 cut(s) 1079, 1689, 1759
SfaNI GCATC 5 cut(s) 97, 130, 669, 1666, 1775
SfcI CTRYAG 5 cut(s) 114, 969, 1132, 1191, 1828
SinI GGWCC 1 cut(s) 1352
SnaBI TACGTA 1 cut(s) 457
SpeI ACTAGT 2 cut(s) 728, 1205
SsiI CCGC 4 cut(s) 9, 196, 362, 1792
SspMI CTAG 5 cut(s) 437, 657, 729, 857, 1206
StyD4I CCNGG 5 cut(s) 796, 923, 1348, 1354, 1501
StyI CCWWGG 3 cut(s) 533, 1082, 1617
TaaI ACNGT 4 cut(s) 1136, 1258, 1544, 1699
TaiI ACGT 1 cut(s) 459
TaqI TCGA 2 cut(s) 1328, 1593
TatI WGTACW 2 cut(s) 1399, 1464
TauI GCSGC 1 cut(s) 198
TfiI GAWTC 5 cut(s) 324, 330, 449, 1310, 1488
Tru1I TTAA 1 cut(s) 396
Tru9I TTAA 1 cut(s) 396
TseFI GTSAC 6 cut(s) 410, 523, 1252, 1492, 1550, 1699
TseI GCWGC 6 cut(s) 116, 257, 305, 1445, 1745, 1837
Tsp45I GTSAC 6 cut(s) 410, 523, 1252, 1492, 1550, 1699
TspDTI ATGAA 4 cut(s) 49, 274, 1203, 1770
TspGWI ACGGA 1 cut(s) 508
Tth111I GACNNNGTC 1 cut(s) 179
VneI GTGCAC 1 cut(s) 1755
VpaK11BI GGWCC 1 cut(s) 1352
XapI RAATTY 3 cut(s) 367, 767, 1319
XceI RCATGY 3 cut(s) 491, 821, 1040
XspI CTAG 5 cut(s) 437, 657, 729, 857, 1206
ZrmI AGTACT 1 cut(s) 1401
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.