Rh1CG253000

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Reverse (-)
51635442 .. 51636444
1003 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG253000.1

Sequence Viewer

Length: 804 bp
ATGTCTGCAAGCAGCAGCAGCAGCAGCACGCAAGCAATCTGCTTCTGTAATATTTGCTTCCTAATTATTTTCATCAATTTCCTCTCTCACTTTGCTCATCCACTCTCCTTCAATATAGATCGGTTCGACCAGAGTGGAAATGGAGTTGTCTGTGATGGTGATGCGCATGTCAAGTTTTCATCCGGAGTGATCGGGCTCAACACAGTCACTTATTACCCTAGTACTAGCACTGGACATGCTACGTATGAAGAGCCTTTGCATCTATGGGACAATGCTACTGGGTCACTGGCAGACTTCACTACTCATTTCACTTTCGTGGTCGACTCTGGTTTTTACAACTTCAGCGATGGATTTGCCTTTTTCCTTGCTCCTGTTGGCTTTGGTATTCCACTCAACTCTGGCGGTAGTGAACTGGGATTATTCAACACCACCACCAATTTTAATGCCAAGATTGTAACCGTAGAGTTCGACACCTGGGCAGACAAGGGCAATGGTACCGATTGGGATCCAGACTGGCCGCATATTGGGATAAACATCAATGAAATCTCTTCGGTTACGTCCGCCAAATGGAATGCCAGTAACATCATCGGGAAGACAGGTAATGCATGGATTACTTACAACGCTACTGCCAACAACCTTTCTGTCTTTTGGACATTCAAGGAAAACACAAACCCCGTTTTTCCAGGCAATACTACTTCTTCCCTTACTTACCATGTTGACTTGCGAAAGTCATATGTTGGTTTATGGTATCAAGGAATCGGAGAAACAATTACTCAGGCGAAGTCTCTGATCTTGACTGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

267

Amino Acids

29.11

Weight (kDa)

4.9

Isoelectric Point (pI)

23.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 35 - 244 1.8e-48 Legume lectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 165
Acc65I GGTACC 1 cut(s) 494
AccB1I GGYRCC 1 cut(s) 494
AccI GTMKAC 1 cut(s) 321
AccIII TCCGGA 1 cut(s) 182
AciI CCGC 3 cut(s) 402, 518, 561
AclWI GGATC 2 cut(s) 500, 513
AcoI YGGCCR 1 cut(s) 515
AcuI CTGAAG 1 cut(s) 325
AfaI GTAC 2 cut(s) 223, 496
AfiI CCNNNNNNNGG 2 cut(s) 524, 567
AgsI TTSAA 3 cut(s) 112, 424, 658
AjnI CCWGG 2 cut(s) 473, 682
AleI CACNNNNGTG 1 cut(s) 314
Alw26I GTCTC 1 cut(s) 789
AlwI GGATC 2 cut(s) 500, 513
Aor13HI TCCGGA 1 cut(s) 182
AoxI GGCC 1 cut(s) 515
ApeKI GCWGC 5 cut(s) 12, 15, 18, 21, 24
Asp718I GGTACC 1 cut(s) 494
AspLEI GCGC 1 cut(s) 166
AsuHPI GGTGA 1 cut(s) 170
BamHI GGATCC 1 cut(s) 505
BanI GGYRCC 1 cut(s) 494
BanII GRGCYC 1 cut(s) 198
BbsI GAAGAC 1 cut(s) 599
BbvI GCAGC 5 cut(s) 24, 27, 30, 33, 36
BccI CCATC 2 cut(s) 149, 341
BcgI CGANNNNNNTGC 2 cut(s) 335, 369
BciT130I CCWGG 2 cut(s) 475, 684
BcoDI GTCTC 1 cut(s) 789
BfaI CTAG 3 cut(s) 219, 225, 802
BisI GCNGC 6 cut(s) 13, 16, 19, 22, 25, 518
BlsI GCNGC 6 cut(s) 14, 17, 20, 23, 26, 519
BmcAI AGTACT 1 cut(s) 223
Bme1390I CCNGG 2 cut(s) 475, 684
BmiI GGNNCC 2 cut(s) 496, 507
BmrFI CCNGG 2 cut(s) 475, 684
BmrI ACTGGG 2 cut(s) 288, 422
BmsI GCATC 2 cut(s) 151, 268
BmuI ACTGGG 2 cut(s) 288, 422
BpiI GAAGAC 1 cut(s) 599
BsaAI YACGTR 1 cut(s) 243
BsaBI GATNNNNATC 2 cut(s) 504, 533
BsaJI CCNNGG 1 cut(s) 474
BsaWI WCCGGW 1 cut(s) 182
Bsc4I CCNNNNNNNGG 2 cut(s) 524, 567
Bse1I ACTGG 7 cut(s) 235, 283, 291, 417, 518, 576, 802
Bse3DI GCAATG 1 cut(s) 496
Bse8I GATNNNNATC 2 cut(s) 504, 533
BseAI TCCGGA 1 cut(s) 182
BseBI CCWGG 2 cut(s) 475, 684
BseDI CCNNGG 1 cut(s) 474
BseGI GGATG 2 cut(s) 97, 179
BseJI GATNNNNATC 2 cut(s) 504, 533
BseLI CCNNNNNNNGG 2 cut(s) 524, 567
BseMI GCAATG 1 cut(s) 496
BseMII CTCAG 1 cut(s) 788
BseNI ACTGG 7 cut(s) 235, 283, 291, 417, 518, 576, 802
BseXI GCAGC 5 cut(s) 24, 27, 30, 33, 36
BshFI GGCC 1 cut(s) 517
BshNI GGYRCC 1 cut(s) 494
BsiSI CCGG 1 cut(s) 183
BslFI GGGAC 1 cut(s) 281
BslI CCNNNNNNNGG 2 cut(s) 524, 567
BsmAI GTCTC 1 cut(s) 789
BsmFI GGGAC 1 cut(s) 281
BsmI GAATGC 1 cut(s) 577
BsnI GGCC 1 cut(s) 517
Bsp1286I GDGCHC 1 cut(s) 198
Bsp13I TCCGGA 1 cut(s) 182
Bsp143I GATC 4 cut(s) 118, 189, 505, 789
BspACI CCGC 3 cut(s) 402, 518, 561
BspANI GGCC 1 cut(s) 517
BspCNI CTCAG 1 cut(s) 787
BspEI TCCGGA 1 cut(s) 182
BspLI GGNNCC 2 cut(s) 496, 507
BspPI GGATC 2 cut(s) 500, 513
BspQI GCTCTTC 1 cut(s) 243
BspT107I GGYRCC 1 cut(s) 494
BsrDI GCAATG 1 cut(s) 496
BsrI ACTGG 7 cut(s) 235, 283, 291, 417, 518, 576, 802
BssECI CCNNGG 1 cut(s) 474
BssMI GATC 4 cut(s) 118, 189, 505, 789
Bst2UI CCWGG 2 cut(s) 475, 684
Bst4CI ACNGT 2 cut(s) 205, 460
Bst6I CTCTTC 2 cut(s) 243, 553
BstBAI YACGTR 1 cut(s) 243
BstC8I GCNNGC 3 cut(s) 10, 29, 33
BstDEI CTNAG 1 cut(s) 774
BstF5I GGATG 2 cut(s) 97, 179
BstHHI GCGC 1 cut(s) 166
BstKTI GATC 4 cut(s) 121, 192, 508, 792
BstMAI GTCTC 1 cut(s) 789
BstMBI GATC 4 cut(s) 118, 189, 505, 789
BstMWI GCNNNNNNNGC 3 cut(s) 18, 21, 24
BstNI CCWGG 2 cut(s) 475, 684
BstNSI RCATGY 2 cut(s) 170, 239
BstSCI CCNGG 2 cut(s) 473, 682
BstSNI TACGTA 1 cut(s) 243
BstV1I GCAGC 5 cut(s) 24, 27, 30, 33, 36
BstV2I GAAGAC 1 cut(s) 599
BstX2I RGATCY 1 cut(s) 505
BstYI RGATCY 1 cut(s) 505
BsuRI GGCC 1 cut(s) 517
BtgZI GCGATG 1 cut(s) 360
BtsCI GGATG 2 cut(s) 97, 179
BtsIMutI CAGTG 2 cut(s) 228, 284
Cac8I GCNNGC 3 cut(s) 10, 29, 33
CfoI GCGC 1 cut(s) 166
Csp6I GTAC 2 cut(s) 222, 495
CviAII CATG 4 cut(s) 167, 236, 606, 713
CviJI RGCY 5 cut(s) 196, 253, 378, 517, 801
CviKI_1 RGCY 5 cut(s) 196, 253, 378, 517, 801
CviQI GTAC 2 cut(s) 222, 495
DdeI CTNAG 1 cut(s) 774
DpnI GATC 4 cut(s) 120, 191, 507, 791
DpnII GATC 4 cut(s) 118, 189, 505, 789
EaeI YGGCCR 1 cut(s) 515
Eam1104I CTCTTC 2 cut(s) 243, 553
EarI CTCTTC 2 cut(s) 243, 553
EciI GGCGGA 1 cut(s) 550
Eco105I TACGTA 1 cut(s) 243
Eco24I GRGCYC 1 cut(s) 198
Eco57I CTGAAG 1 cut(s) 325
EcoRII CCWGG 2 cut(s) 473, 682
EcoT22I ATGCAT 1 cut(s) 607
EcoT38I GRGCYC 1 cut(s) 198
FaeI CATG 4 cut(s) 170, 239, 609, 716
FaqI GGGAC 1 cut(s) 281
FatI CATG 4 cut(s) 166, 235, 605, 712
FauNDI CATATG 1 cut(s) 733
FblI GTMKAC 1 cut(s) 321
Fnu4HI GCNGC 6 cut(s) 13, 16, 19, 22, 25, 518
FokI GGATG 2 cut(s) 84, 166
FriOI GRGCYC 1 cut(s) 198
Fsp4HI GCNGC 6 cut(s) 13, 16, 19, 22, 25, 518
FspAI RTGCGCAY 1 cut(s) 165
FspBI CTAG 3 cut(s) 219, 225, 802
FspI TGCGCA 1 cut(s) 165
GlaI GCGC 1 cut(s) 165
GluI GCNGC 6 cut(s) 13, 16, 19, 22, 25, 518
HaeIII GGCC 1 cut(s) 517
HapII CCGG 1 cut(s) 183
HhaI GCGC 1 cut(s) 166
Hin1II CATG 4 cut(s) 170, 239, 609, 716
Hin6I GCGC 1 cut(s) 164
HinP1I GCGC 1 cut(s) 164
HincII GTYRAC 2 cut(s) 322, 718
HindII GTYRAC 2 cut(s) 322, 718
HinfI GANTC 2 cut(s) 323, 756
HpaII CCGG 1 cut(s) 183
HphI GGTGA 1 cut(s) 170
Hpy166II GTNNAC 3 cut(s) 322, 410, 718
Hpy188I TCNGA 2 cut(s) 761, 789
Hpy188III TCNNGA 4 cut(s) 183, 509, 589, 793
Hpy8I GTNNAC 3 cut(s) 322, 410, 718
HpyAV CCTTC 1 cut(s) 118
HpyCH4III ACNGT 2 cut(s) 205, 460
HpyCH4IV ACGT 2 cut(s) 242, 557
HpyCH4V TGCA 3 cut(s) 8, 259, 605
HpyF10VI GCNNNNNNNGC 3 cut(s) 18, 21, 24
HpyF3I CTNAG 1 cut(s) 774
HpySE526I ACGT 2 cut(s) 242, 557
Hsp92II CATG 4 cut(s) 170, 239, 609, 716
HspAI GCGC 1 cut(s) 164
Kpn2I TCCGGA 1 cut(s) 182
KpnI GGTACC 1 cut(s) 498
Kzo9I GATC 4 cut(s) 118, 189, 505, 789
LguI GCTCTTC 1 cut(s) 243
LmnI GCTCC 1 cut(s) 373
Lsp1109I GCAGC 5 cut(s) 24, 27, 30, 33, 36
LweI GCATC 2 cut(s) 151, 268
MaeI CTAG 3 cut(s) 219, 225, 802
MaeII ACGT 2 cut(s) 242, 557
MaeIII GTNAC 5 cut(s) 205, 282, 454, 553, 578
MalI GATC 4 cut(s) 120, 191, 507, 791
MboI GATC 4 cut(s) 118, 189, 505, 789
MboII GAAGA 4 cut(s) 260, 540, 604, 690
MflI RGATCY 1 cut(s) 505
MhlI GDGCHC 1 cut(s) 198
MluCI AATT 4 cut(s) 63, 76, 436, 768
MlyI GAGTC 1 cut(s) 317
MnlI CCTC 1 cut(s) 92
Mph1103I ATGCAT 1 cut(s) 607
MroI TCCGGA 1 cut(s) 182
MseI TTAA 1 cut(s) 441
MslI CAYNNNNRTG 1 cut(s) 314
MspI CCGG 1 cut(s) 183
MspR9I CCNGG 2 cut(s) 475, 684
Mva1269I GAATGC 1 cut(s) 577
MvaI CCWGG 2 cut(s) 475, 684
MwoI GCNNNNNNNGC 3 cut(s) 18, 21, 24
NdeI CATATG 1 cut(s) 733
NdeII GATC 4 cut(s) 118, 189, 505, 789
NlaIII CATG 4 cut(s) 170, 239, 609, 716
NlaIV GGNNCC 2 cut(s) 496, 507
NmuCI GTSAC 2 cut(s) 205, 282
NsbI TGCGCA 1 cut(s) 165
NsiI ATGCAT 1 cut(s) 607
NspI RCATGY 2 cut(s) 170, 239
OliI CACNNNNGTG 1 cut(s) 314
PciSI GCTCTTC 1 cut(s) 243
PctI GAATGC 1 cut(s) 577
PfeI GAWTC 1 cut(s) 756
PkrI GCNGC 6 cut(s) 14, 17, 20, 23, 26, 519
PleI GAGTC 1 cut(s) 317
PpsI GAGTC 1 cut(s) 317
Ppu21I YACGTR 1 cut(s) 243
Psp6I CCWGG 2 cut(s) 473, 682
PspGI CCWGG 2 cut(s) 473, 682
PspN4I GGNNCC 2 cut(s) 496, 507
PsuI RGATCY 1 cut(s) 505
RsaI GTAC 2 cut(s) 223, 496
RsaNI GTAC 2 cut(s) 222, 495
RseI CAYNNNNRTG 1 cut(s) 314
SalI GTCGAC 1 cut(s) 320
SapI GCTCTTC 1 cut(s) 243
SaqAI TTAA 1 cut(s) 441
SatI GCNGC 6 cut(s) 13, 16, 19, 22, 25, 518
Sau3AI GATC 4 cut(s) 118, 189, 505, 789
ScaI AGTACT 1 cut(s) 223
SchI GAGTC 1 cut(s) 317
ScrFI CCNGG 2 cut(s) 475, 684
SduI GDGCHC 1 cut(s) 198
SetI ASST 5 cut(s) 245, 476, 560, 601, 639
SfaNI GCATC 2 cut(s) 151, 268
SmiMI CAYNNNNRTG 1 cut(s) 314
SnaBI TACGTA 1 cut(s) 243
Sse9I AATT 4 cut(s) 63, 76, 436, 768
SsiI CCGC 3 cut(s) 402, 518, 561
SspI AATATT 1 cut(s) 52
SspMI CTAG 3 cut(s) 219, 225, 802
StyD4I CCNGG 2 cut(s) 473, 682
TaaI ACNGT 2 cut(s) 205, 460
TaiI ACGT 2 cut(s) 245, 560
TaqI TCGA 3 cut(s) 126, 321, 468
TasI AATT 4 cut(s) 63, 76, 436, 768
TatI WGTACW 1 cut(s) 221
TauI GCSGC 1 cut(s) 520
TfiI GAWTC 1 cut(s) 756
Tru1I TTAA 1 cut(s) 441
Tru9I TTAA 1 cut(s) 441
TscAI CASTG 2 cut(s) 235, 291
TseFI GTSAC 2 cut(s) 205, 282
TseI GCWGC 5 cut(s) 12, 15, 18, 21, 24
Tsp45I GTSAC 2 cut(s) 205, 282
TspDTI ATGAA 4 cut(s) 61, 168, 261, 555
TspRI CASTG 2 cut(s) 235, 291
XceI RCATGY 2 cut(s) 170, 239
XcmI CCANNNNNNNNNTGG 1 cut(s) 137
XmiI GTMKAC 1 cut(s) 321
XspI CTAG 3 cut(s) 219, 225, 802
ZrmI AGTACT 1 cut(s) 223
Zsp2I ATGCAT 1 cut(s) 607
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.