Prupe.4G174900_v2.0.a1

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
10355921 .. 10357966
2046 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G174900.1

Sequence Viewer

Length: 2046 bp
ATGCTTGTCAATTACTCTGGCTATTGGATCATCACACACCATTCACAAAACCTTGACCAAATCCTTTTTCTTCTGTTCTGTTTAATAACCCCTTCAGTAACTCCATTAAGCTTTTATTTCCCCATCTTTAGTCCTACTGATATCAACACTATATCTCTGGAGGGAGACGCTAATCTCGACAGACAATTCCTCCGCCTCACCAAAAGTTGTTCTCTCGATCAACAGGAGCAAAGCGTCGGTCGAGCCACTTACCACAAACCCTTCCTCCTCCGGGAAACTACTACCGGAAAACTCGCTGATTTCAGCACACATTTCACATTCATCATCCATTCACAAAAGAGTTCCGAATATGGAAATGGACTCACCTTTTTCCTAGCGCCAGATGGGTCCTTACTCAACCGCAAGCTAGGAAAAGGTAGCAATCTTGGCCTCCCTGTCGAACACCTCCCGGGACACATGTCAACGAATCAGTACCCATTCGTGGCGGTGGAGTTTGATATCTCGCAAAATGGAATCCCAACCATCCAAGATCCCATCTACGATCATGTAGGTGTCGATGTTAACTCTCTCAAGTCATCTAAGACCGCGCCTTGGAATGGTAGGGTTTCGGATGGCCGAAAAAATGAAGCTTGGATTAATTACAATTCTAGCTCGAAAATACTTACTGTTGCCTTCACGAGTTTCGTTAACGGTACAAATGGTACCCAACTGCAGAGAACCATCAACTATCTCGATCACATAATTGATCTGAATCAGCACTTGCCGGATAGGGTTATTGTTGGCTTCTCAGCTTCAACGGGGACTCCGGTTGCTCTACATGGGATCAATTCTTGGAGTTTTAATTCAACTTCATTGCTTGATGAGAGTGCAAATGACAACATTAATATTGGTCTAGCAGTTGGGTTGGGTGTTGGTGGATGTCTTATATTGTTTGCGGGGTTGGTTTTGTTTTGGAAGAAAGGGGGACTCAGGAAAAGTGAGGAAGAGGCTATAGTTGTTGATGATGAGTTCGATAAGGGGACCGGCCCAACGAAGTTTCCATACAATGAGTTGGCTCTAGCCACCAGTGATTTTAAAGAGGAACAGAAGCTTGGAGAAGGAGGGTTTGGTGGGGTTTATAAAGGCTTTATAAAATATTTGAACTCATATGTTGCTGTTAAGAGGATATCCAAGGGGTCGAAACAAGGGCAGAAGGAGTATACGTCAGAAGTAAGGATCATCAGTCGACTTAGGCATCGAAATTTAGTGCAACTCATTGGTTGGTGCCACGAAAAAGGAGAACTCCTGCTTGTTTATGAGTTCATGCCCAACGGCAGCTTAGATTCACATTTGTTCAAAGCAAAAAATATGTTAGTTTGGGAGGCAAGATACAGAATTGCTCAAGGCTTGGCCTCCGGGTTGCTCTATTTACATGAAGAATGGGAGCAATGTGTGGTGCACAGGGATATCAAATCCAGCAACATTTTGTTGGATTCAAATTTCAACGCAAAACTTGGGGATTTCGGGTTGGCTCGCCTTGTGGATCATGGAGAACAATCACAAACAACGGTTTTGGCTGGAACTATGGGTTACATGGCTCCGGAATGTCTTACCAATGGAAAGGCTAGCAAGGAATCCGATGTTTATAGTTTCGGAGTTGTTGCACTAGAGATAGCCTGTGGGAGAAAACCCATCGATCTTCACTTGGAAAGGAATCAAATCAATATGGTAGAATGGGTTTGGGAGCTTTATGGAAAAGGGAAACTCCTCGAAGCGACTGATCAAAAACTGTGCGAAGATTTTGATGAGAAACAAATGGAATGCTTGATGATAGTTGGGTTGTGGTGTGCTCACCCGGATTACAATATGAGGCCTTCAATACAACGAGCAATTCAAGTGCTTAACTTTGAAGCTGCATTGCCCGTTCTCCCGCCAAAGAAGCCAGTGGCCACCTATTCTACTCCTCCACCATCACTCCCATTGTTAATGTCTTCTTGTAGCACTACTGGTTTTGAAATATGTGAAATTGAGTCTTCAGGGTATGCTTATAGCACTAATTCCTCATAA

Protein Analysis

682

Amino Acids

75.74

Weight (kDa)

5.91

Isoelectric Point (pI)

33.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1119, 1130
Acc65I GGTACC 1 cut(s) 701
AccB1I GGYRCC 2 cut(s) 701, 1263
AccI GTMKAC 2 cut(s) 1199, 1225
AccII CGCG 1 cut(s) 587
AccIII TCCGGA 1 cut(s) 1579
AciI CCGC 6 cut(s) 193, 400, 485, 585, 935, 1910
AclWI GGATC 5 cut(s) 35, 524, 830, 1223, 1530
AcoI YGGCCR 2 cut(s) 613, 1926
AcsI RAATTY 2 cut(s) 1240, 1477
AcuI CTGAAG 2 cut(s) 78, 1998
AfaI GTAC 3 cut(s) 473, 694, 703
AfiI CCNNNNNNNGG 4 cut(s) 271, 481, 591, 596
AflIII ACRYGT 1 cut(s) 456
AjuI GAANNNNNNNTTGG 6 cut(s) 51, 83, 1074, 1089, 1106, 1121
AluBI AGCT 9 cut(s) 111, 406, 629, 651, 791, 1090, 1317, 1726, 1892
AluI AGCT 9 cut(s) 111, 406, 629, 651, 791, 1090, 1317, 1726, 1892
Alw21I GWGCWC 2 cut(s) 1440, 1831
Alw26I GTCTC 1 cut(s) 159
Alw44I GTGCAC 1 cut(s) 1436
AlwI GGATC 5 cut(s) 35, 524, 830, 1223, 1530
Ama87I CYCGRG 1 cut(s) 448
Aor13HI TCCGGA 1 cut(s) 1579
AoxI GGCC 6 cut(s) 427, 613, 1024, 1389, 1850, 1926
ApaLI GTGCAC 1 cut(s) 1436
ApeKI GCWGC 2 cut(s) 1314, 1892
ApoI RAATTY 2 cut(s) 1240, 1477
ArsI GACNNNNNNTTYG 2 cut(s) 223, 255
AseI ATTAAT 2 cut(s) 636, 882
Asp718I GGTACC 1 cut(s) 701
AspLEI GCGC 2 cut(s) 379, 589
AspS9I GGNCC 3 cut(s) 387, 1020, 1025
AsuC2I CCSGG 5 cut(s) 272, 449, 450, 1396, 1835
AsuHPI GGTGA 3 cut(s) 190, 355, 1823
AsuNHI GCTAGC 1 cut(s) 1604
AvaI CYCGRG 1 cut(s) 448
AvaII GGWCC 2 cut(s) 387, 1020
BaeGI GKGCMC 1 cut(s) 1440
BalI TGGCCA 1 cut(s) 1928
BanI GGYRCC 2 cut(s) 701, 1263
BarI GAAGNNNNNNTAC 2 cut(s) 1025, 1057
BauI CACGAG 1 cut(s) 676
BbsI GAAGAC 2 cut(s) 1962, 2004
Bbv12I GWGCWC 2 cut(s) 1440, 1831
BbvI GCAGC 2 cut(s) 1326, 1879
BccI CCATC 8 cut(s) 131, 377, 530, 542, 605, 728, 1679, 1957
BceAI ACGGC 1 cut(s) 1327
BclI TGATCA 1 cut(s) 1759
BcnI CCSGG 5 cut(s) 272, 449, 450, 1396, 1835
BcoDI GTCTC 1 cut(s) 159
BfaI CTAG 7 cut(s) 374, 407, 648, 893, 1058, 1605, 1646
BfmI CTRYAG 2 cut(s) 710, 990
BfoI RGCGCY 1 cut(s) 380
BisI GCNGC 2 cut(s) 1315, 1893
BlsI GCNGC 2 cut(s) 1316, 1894
Bme1390I CCNGG 5 cut(s) 272, 449, 450, 1396, 1835
Bme18I GGWCC 2 cut(s) 387, 1020
BmeT110I CYCGRG 1 cut(s) 448
BmgT120I GGNCC 3 cut(s) 387, 1020, 1025
BmiI GGNNCC 5 cut(s) 388, 703, 1021, 1265, 1578
BmrFI CCNGG 5 cut(s) 272, 449, 450, 1396, 1835
BmsI GCATC 1 cut(s) 1243
BmtI GCTAGC 1 cut(s) 1608
BoxI GACNNNNGTC 1 cut(s) 457
BpiI GAAGAC 2 cut(s) 1962, 2004
BpmI CTGGAG 1 cut(s) 179
BpuEI CTTGAG 2 cut(s) 554, 1365
BpuMI CCSGG 5 cut(s) 272, 449, 450, 1396, 1835
Bsa29I ATCGAT 1 cut(s) 1674
BsaBI GATNNNNATC 1 cut(s) 750
BsaJI CCNNGG 3 cut(s) 448, 590, 1170
BsaWI WCCGGW 3 cut(s) 284, 805, 1579
Bsc4I CCNNNNNNNGG 4 cut(s) 271, 481, 591, 596
Bse118I RCCGGY 1 cut(s) 1022
Bse1I ACTGG 3 cut(s) 1065, 1922, 1990
Bse3DI GCAATG 3 cut(s) 851, 1433, 1895
Bse8I GATNNNNATC 1 cut(s) 750
BseAI TCCGGA 1 cut(s) 1579
BseCI ATCGAT 1 cut(s) 1674
BseDI CCNNGG 3 cut(s) 448, 590, 1170
BseGI GGATG 4 cut(s) 324, 522, 616, 923
BseJI GATNNNNATC 1 cut(s) 750
BseLI CCNNNNNNNGG 4 cut(s) 271, 481, 591, 596
BseMI GCAATG 3 cut(s) 851, 1433, 1895
BseMII CTCAG 2 cut(s) 801, 982
BseNI ACTGG 3 cut(s) 1065, 1922, 1990
BseRI GAGGAG 3 cut(s) 257, 1736, 1932
BseSI GKGCMC 1 cut(s) 1440
BseXI GCAGC 2 cut(s) 1326, 1879
Bsh1236I CGCG 1 cut(s) 587
Bsh1285I CGRYCG 1 cut(s) 241
BshFI GGCC 6 cut(s) 429, 615, 1026, 1391, 1852, 1928
BshNI GGYRCC 2 cut(s) 701, 1263
BshVI ATCGAT 1 cut(s) 1674
BsiEI CGRYCG 1 cut(s) 241
BsiHKAI GWGCWC 2 cut(s) 1440, 1831
BsiHKCI CYCGRG 1 cut(s) 448
BsiSI CCGG 9 cut(s) 271, 285, 449, 764, 806, 1023, 1395, 1580, 1835
BslFI GGGAC 4 cut(s) 465, 814, 978, 1033
BslI CCNNNNNNNGG 4 cut(s) 271, 481, 591, 596
BsmAI GTCTC 1 cut(s) 159
BsmBI CGTCTC 1 cut(s) 159
BsmFI GGGAC 4 cut(s) 465, 814, 978, 1033
BsmI GAATGC 1 cut(s) 1805
BsnI GGCC 6 cut(s) 429, 615, 1026, 1391, 1852, 1928
BsoBI CYCGRG 1 cut(s) 448
Bsp1286I GDGCHC 2 cut(s) 1440, 1831
Bsp13I TCCGGA 1 cut(s) 1579
BspACI CCGC 6 cut(s) 193, 400, 485, 585, 935, 1910
BspANI GGCC 6 cut(s) 429, 615, 1026, 1391, 1852, 1928
BspCNI CTCAG 2 cut(s) 800, 981
BspDI ATCGAT 1 cut(s) 1674
BspEI TCCGGA 1 cut(s) 1579
BspFNI CGCG 1 cut(s) 587
BspLI GGNNCC 5 cut(s) 388, 703, 1021, 1265, 1578
BspMAI CTGCAG 1 cut(s) 714
BspOI GCTAGC 1 cut(s) 1608
BspPI GGATC 5 cut(s) 35, 524, 830, 1223, 1530
BspT107I GGYRCC 2 cut(s) 701, 1263
BsrDI GCAATG 3 cut(s) 851, 1433, 1895
BsrFI RCCGGY 1 cut(s) 1022
BsrI ACTGG 3 cut(s) 1065, 1922, 1990
BssAI RCCGGY 1 cut(s) 1022
BssECI CCNNGG 3 cut(s) 448, 590, 1170
BssNAI GTATAC 1 cut(s) 1200
BssSI CACGAG 1 cut(s) 676
BssT1I CCWWGG 2 cut(s) 590, 1170
Bst1107I GTATAC 1 cut(s) 1200
Bst2BI CACGAG 1 cut(s) 676
Bst4CI ACNGT 4 cut(s) 667, 692, 1549, 1770
Bst6I CTCTTC 1 cut(s) 978
BstC8I GCNNGC 3 cut(s) 404, 1513, 1606
BstDEI CTNAG 5 cut(s) 579, 787, 968, 1229, 1318
BstF5I GGATG 4 cut(s) 324, 522, 616, 923
BstFNI CGCG 1 cut(s) 587
BstH2I RGCGCY 1 cut(s) 380
BstHHI GCGC 2 cut(s) 379, 589
BstMAI GTCTC 1 cut(s) 159
BstMCI CGRYCG 1 cut(s) 241
BstMWI GCNNNNNNNGC 2 cut(s) 426, 1918
BstNSI RCATGY 1 cut(s) 460
BstPAI GACNNNNGTC 1 cut(s) 457
BstSCI CCNGG 5 cut(s) 270, 447, 448, 1394, 1833
BstSFI CTRYAG 2 cut(s) 710, 990
BstSLI GKGCMC 1 cut(s) 1440
BstUI CGCG 1 cut(s) 587
BstV1I GCAGC 2 cut(s) 1326, 1879
BstV2I GAAGAC 2 cut(s) 1962, 2004
BstX2I RGATCY 1 cut(s) 529
BstYI RGATCY 1 cut(s) 529
BstZ17I GTATAC 1 cut(s) 1200
Bsu15I ATCGAT 1 cut(s) 1674
BsuRI GGCC 6 cut(s) 429, 615, 1026, 1391, 1852, 1928
BsuTUI ATCGAT 1 cut(s) 1674
BtsCI GGATG 4 cut(s) 324, 522, 616, 923
BtsIMutI CAGTG 2 cut(s) 1072, 1929
Cac8I GCNNGC 3 cut(s) 404, 1513, 1606
CfoI GCGC 2 cut(s) 379, 589
Cfr10I RCCGGY 1 cut(s) 1022
Cfr13I GGNCC 3 cut(s) 387, 1020, 1025
Cfr9I CCCGGG 1 cut(s) 448
ClaI ATCGAT 1 cut(s) 1674
CseI GACGC 2 cut(s) 176, 223
Csp6I GTAC 3 cut(s) 472, 693, 702
CviAII CATG 7 cut(s) 457, 545, 818, 1303, 1412, 1526, 1573
CviQI GTAC 3 cut(s) 472, 693, 702
DdeI CTNAG 5 cut(s) 579, 787, 968, 1229, 1318
DraI TTTAAA 1 cut(s) 1075
EaeI YGGCCR 2 cut(s) 613, 1926
Eam1104I CTCTTC 1 cut(s) 978
EarI CTCTTC 1 cut(s) 978
EciI GGCGGA 1 cut(s) 182
Eco130I CCWWGG 2 cut(s) 590, 1170
Eco147I AGGCCT 1 cut(s) 1852
Eco32I GATATC 4 cut(s) 142, 499, 1167, 1447
Eco47I GGWCC 2 cut(s) 387, 1020
Eco57I CTGAAG 2 cut(s) 78, 1998
Eco88I CYCGRG 1 cut(s) 448
EcoO109I RGGNCCY 1 cut(s) 387
EcoRV GATATC 4 cut(s) 142, 499, 1167, 1447
EcoT14I CCWWGG 2 cut(s) 590, 1170
ErhI CCWWGG 2 cut(s) 590, 1170
Esp3I CGTCTC 1 cut(s) 159
FaeI CATG 7 cut(s) 460, 548, 821, 1306, 1415, 1529, 1576
FaqI GGGAC 4 cut(s) 465, 814, 978, 1033
FatI CATG 7 cut(s) 456, 544, 817, 1302, 1411, 1525, 1572
FauI CCCGC 2 cut(s) 928, 1917
FauNDI CATATG 1 cut(s) 1147
FbaI TGATCA 1 cut(s) 1759
FblI GTMKAC 2 cut(s) 1199, 1225
Fnu4HI GCNGC 2 cut(s) 1315, 1893
FokI GGATG 4 cut(s) 311, 509, 623, 930
Fsp4HI GCNGC 2 cut(s) 1315, 1893
FspBI CTAG 7 cut(s) 374, 407, 648, 893, 1058, 1605, 1646
GlaI GCGC 2 cut(s) 378, 588
GluI GCNGC 2 cut(s) 1315, 1893
GsuI CTGGAG 1 cut(s) 179
HaeII RGCGCY 1 cut(s) 380
HaeIII GGCC 6 cut(s) 429, 615, 1026, 1391, 1852, 1928
HapII CCGG 9 cut(s) 271, 285, 449, 764, 806, 1023, 1395, 1580, 1835
HgaI GACGC 2 cut(s) 176, 223
HhaI GCGC 2 cut(s) 379, 589
Hin1II CATG 7 cut(s) 460, 548, 821, 1306, 1415, 1529, 1576
Hin6I GCGC 2 cut(s) 377, 587
HinP1I GCGC 2 cut(s) 377, 587
HincII GTYRAC 4 cut(s) 462, 562, 688, 1226
HindII GTYRAC 4 cut(s) 462, 562, 688, 1226
HindIII AAGCTT 3 cut(s) 109, 627, 1088
HpaI GTTAAC 2 cut(s) 562, 688
HpaII CCGG 9 cut(s) 271, 285, 449, 764, 806, 1023, 1395, 1580, 1835
HphI GGTGA 3 cut(s) 190, 355, 1823
Hpy166II GTNNAC 6 cut(s) 462, 562, 688, 1200, 1226, 1438
Hpy188I TCNGA 6 cut(s) 346, 610, 750, 1207, 1618, 1634
Hpy188III TCNNGA 7 cut(s) 158, 176, 215, 676, 731, 970, 1580
Hpy8I GTNNAC 6 cut(s) 462, 562, 688, 1200, 1226, 1438
Hpy99I CGWCG 1 cut(s) 239
HpyAV CCTTC 6 cut(s) 102, 271, 682, 1091, 1186, 1863
HpyCH4III ACNGT 4 cut(s) 667, 692, 1549, 1770
HpyCH4IV ACGT 1 cut(s) 1202
HpyCH4V TGCA 6 cut(s) 712, 869, 1249, 1438, 1643, 1895
HpyF10VI GCNNNNNNNGC 2 cut(s) 426, 1918
HpyF3I CTNAG 5 cut(s) 579, 787, 968, 1229, 1318
HpySE526I ACGT 1 cut(s) 1202
Hsp92II CATG 7 cut(s) 460, 548, 821, 1306, 1415, 1529, 1576
HspAI GCGC 2 cut(s) 377, 587
Kpn2I TCCGGA 1 cut(s) 1579
KpnI GGTACC 1 cut(s) 705
Ksp22I TGATCA 1 cut(s) 1759
KspAI GTTAAC 2 cut(s) 562, 688
LmnI GCTCC 4 cut(s) 226, 1423, 1582, 1723
Lsp1109I GCAGC 2 cut(s) 1326, 1879
LweI GCATC 1 cut(s) 1243
MaeI CTAG 7 cut(s) 374, 407, 648, 893, 1058, 1605, 1646
MaeII ACGT 1 cut(s) 1202
MaeIII GTNAC 2 cut(s) 97, 1568
MboII GAAGA 8 cut(s) 62, 967, 995, 1427, 1670, 1787, 1962, 2004
MflI RGATCY 1 cut(s) 529
MhlI GDGCHC 2 cut(s) 1440, 1831
MlsI TGGCCA 1 cut(s) 1928
MluNI TGGCCA 1 cut(s) 1928
MlyI GAGTC 4 cut(s) 354, 796, 960, 2018
MmeI TCCRAC 1 cut(s) 1449
Mox20I TGGCCA 1 cut(s) 1928
MroI TCCGGA 1 cut(s) 1579
MscI TGGCCA 1 cut(s) 1928
MslI CAYNNNNRTG 1 cut(s) 549
Msp20I TGGCCA 1 cut(s) 1928
MspI CCGG 9 cut(s) 271, 285, 449, 764, 806, 1023, 1395, 1580, 1835
MspR9I CCNGG 5 cut(s) 272, 449, 450, 1396, 1835
Mva1269I GAATGC 1 cut(s) 1805
MvnI CGCG 1 cut(s) 587
MwoI GCNNNNNNNGC 2 cut(s) 426, 1918
NciI CCSGG 5 cut(s) 272, 449, 450, 1396, 1835
NdeI CATATG 1 cut(s) 1147
NheI GCTAGC 1 cut(s) 1604
NlaIII CATG 7 cut(s) 460, 548, 821, 1306, 1415, 1529, 1576
NlaIV GGNNCC 5 cut(s) 388, 703, 1021, 1265, 1578
NspI RCATGY 1 cut(s) 460
PceI AGGCCT 1 cut(s) 1852
PciI ACATGT 1 cut(s) 456
PcsI WCGNNNNNNNCGW 1 cut(s) 174
PctI GAATGC 1 cut(s) 1805
PfeI GAWTC 7 cut(s) 466, 513, 751, 1322, 1472, 1613, 1693
PfoI TCCNGGA 1 cut(s) 270
PkrI GCNGC 2 cut(s) 1316, 1894
PleI GAGTC 4 cut(s) 354, 796, 960, 2017
PpsI GAGTC 4 cut(s) 354, 796, 960, 2017
PpuMI RGGWCCY 1 cut(s) 387
PscI ACATGT 1 cut(s) 456
PshAI GACNNNNGTC 1 cut(s) 457
PshBI ATTAAT 2 cut(s) 636, 882
PsiI TTATAA 2 cut(s) 1119, 1130
Psp5II RGGWCCY 1 cut(s) 387
PspN4I GGNNCC 5 cut(s) 388, 703, 1021, 1265, 1578
PspPI GGNCC 3 cut(s) 387, 1020, 1025
PspPPI RGGWCCY 1 cut(s) 387
PstI CTGCAG 1 cut(s) 714
PsuI RGATCY 1 cut(s) 529
RsaI GTAC 3 cut(s) 473, 694, 703
RsaNI GTAC 3 cut(s) 472, 693, 702
RseI CAYNNNNRTG 1 cut(s) 549
SalI GTCGAC 1 cut(s) 1224
SatI GCNGC 2 cut(s) 1315, 1893
Sau96I GGNCC 3 cut(s) 387, 1020, 1025
SchI GAGTC 4 cut(s) 354, 796, 960, 2018
ScrFI CCNGG 5 cut(s) 272, 449, 450, 1396, 1835
SduI GDGCHC 2 cut(s) 1440, 1831
SfaNI GCATC 1 cut(s) 1243
SfcI CTRYAG 2 cut(s) 710, 990
SinI GGWCC 2 cut(s) 387, 1020
SmaI CCCGGG 1 cut(s) 450
SmiMI CAYNNNNRTG 1 cut(s) 549
SmlI CTYRAG 2 cut(s) 569, 1380
SmoI CTYRAG 2 cut(s) 569, 1380
SseBI AGGCCT 1 cut(s) 1852
SsiI CCGC 6 cut(s) 193, 400, 485, 585, 935, 1910
SspI AATATT 2 cut(s) 886, 1136
SspMI CTAG 7 cut(s) 374, 407, 648, 893, 1058, 1605, 1646
StuI AGGCCT 1 cut(s) 1852
StyD4I CCNGG 5 cut(s) 270, 447, 448, 1394, 1833
StyI CCWWGG 2 cut(s) 590, 1170
TaaI ACNGT 4 cut(s) 667, 692, 1549, 1770
TaiI ACGT 1 cut(s) 1205
TaqII GACCGA 1 cut(s) 227
TfiI GAWTC 7 cut(s) 466, 513, 751, 1322, 1472, 1613, 1693
TscAI CASTG 2 cut(s) 1072, 1929
TseI GCWGC 2 cut(s) 1314, 1892
TspDTI ATGAA 5 cut(s) 310, 639, 840, 1291, 1428
TspMI CCCGGG 1 cut(s) 448
TspRI CASTG 2 cut(s) 1072, 1929
VneI GTGCAC 1 cut(s) 1436
VpaK11BI GGWCC 2 cut(s) 387, 1020
VspI ATTAAT 2 cut(s) 636, 882
XapI RAATTY 2 cut(s) 1240, 1477
XceI RCATGY 1 cut(s) 460
XmaI CCCGGG 1 cut(s) 448
XmiI GTMKAC 2 cut(s) 1199, 1225
XspI CTAG 7 cut(s) 374, 407, 648, 893, 1058, 1605, 1646
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.