Rmu_co8464379.1_g000001

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8464379.1
Physical Location & Seq
Reverse (-)
2 .. 1423
1422 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8464379.1_g000001.1.cds

Sequence Viewer

Length: 1422 bp
atgtttcttaccgtcagttgtaggcaagcaacctttagcttcttcattttcttcaaatttctgtctctttttgctcaaccaatttcattcaatatatctcaattcaaccctgacacagagaacatactctatggaggtgatgcaaggcccaacttaggaactattgaactcaccccacactcgaaatcgttccccgtgggacggtgtacttattcgcaaccttatcacttatgggactctaccactcagtcaccttcacacttcactaccaagttcacattcatgatcgacacttcagacgaagtctccttcagcggtgggtttgactttttccttgcacctttttggtatccaattgtgcccaactcctccggtgctgatctaggactattcaattggaccactagttttgatacctcccacaacagaattgtgatagttgagtttgataccaaagaaaacaaggagtgggatcctcatggacctcatgtcgggatcaatataaataatatctcatcagttgtcaatgctagttgggattatagtgccgtgcgatcgaggaaggtggcaaatgcacaaatagcttacaaagccaccacaaacattctcagtgtgctttggagataccaagaagactggaagcctgtttctgctggtgagagtactaattctctttcttaccaaattaacttacgggatgttctccccaaactggttacaattggtttctcagctagttttggacgtgaaaagggaaactatgtgataatttcacgggaattcaattcaatttcgaattctgatgaaagatccaaatgtaatgatataagtagcaacaaccgagaaaaaaagaagcatgcattcttcgtaggggtggtcagtgcaatttctttcttcaatttgatgcttggtgtggccttgtgtacagtggtggtaaagaagcagagagccatcaatggacatggaaatgtttactccactgccgcggtgccctctataactcagaacctcgagagactagcctttccacgacggtttgcttaccaagaattagttgtagccaccattggatttgcaaaagatagaaggctaggccaaggagggtcaggacaagtttataaaggagtcctacaagatataggttgcgcaattgctgtcaagcgaatctttgcagatcaatgtgagcaccatgagatcattttcctcaatgaagtgaagattttaagccgcttgatacataaaaatctggtgcagtttattggatggtgtcatgagcaaggtgaatgcttacttgtttatgcctacatgcctaatagtagccttgatgctcatctatttggttgtcaggcaacactgcaatggaatttaaggtacaagatagctttaggcttggcctcagccctgcattatctacatgaagat
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

474

Amino Acids

53.37

Weight (kDa)

8.27

Isoelectric Point (pI)

41.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1119
Acc16I TGCGCA 1 cut(s) 1147
AccB1I GGYRCC 1 cut(s) 988
AccII CGCG 1 cut(s) 986
AciI CCGC 4 cut(s) 315, 984, 986, 1228
AclWI GGATC 4 cut(s) 467, 480, 503, 804
AcsI RAATTY 4 cut(s) 56, 779, 796, 1363
AcuI CTGAAG 2 cut(s) 279, 295
AfaI GTAC 4 cut(s) 208, 664, 925, 1373
AfiI CCNNNNNNNGG 4 cut(s) 155, 201, 491, 712
AgsI TTSAA 8 cut(s) 55, 91, 106, 167, 394, 784, 789, 898
AhdI GACNNNNNGTC 1 cut(s) 488
AhlI ACTAGT 1 cut(s) 404
AjiI CACGTC 1 cut(s) 746
AjuI GAANNNNNNNTTGG 2 cut(s) 263, 295
AluBI AGCT 4 cut(s) 39, 584, 734, 1382
AluI AGCT 4 cut(s) 39, 584, 734, 1382
Alw21I GWGCWC 1 cut(s) 1188
Alw26I GTCTC 3 cut(s) 69, 310, 1009
AlwI GGATC 4 cut(s) 467, 480, 503, 804
Ama87I CYCGRG 1 cut(s) 1010
AoxI GGCC 4 cut(s) 146, 915, 1093, 1392
ApoI RAATTY 4 cut(s) 56, 779, 796, 1363
Asp700I GAANNNNTTC 1 cut(s) 188
AspLEI GCGC 1 cut(s) 1148
AspS9I GGNCC 3 cut(s) 147, 399, 482
AsuHPI GGTGA 5 cut(s) 149, 163, 243, 668, 1292
AsuII TTCGAA 1 cut(s) 794
AvaI CYCGRG 1 cut(s) 1010
AvaII GGWCC 2 cut(s) 399, 482
BaeGI GKGCMC 2 cut(s) 363, 993
BamHI GGATCC 1 cut(s) 472
BanI GGYRCC 1 cut(s) 988
BbsI GAAGAC 1 cut(s) 639
Bbv12I GWGCWC 1 cut(s) 1188
BbvCI CCTCAGC 1 cut(s) 1396
BccI CCATC 2 cut(s) 959, 1257
BceAI ACGGC 1 cut(s) 533
BciVI GTATCC 1 cut(s) 360
BcoDI GTCTC 3 cut(s) 69, 310, 1009
BcuI ACTAGT 1 cut(s) 404
BfaI CTAG 6 cut(s) 383, 405, 531, 735, 1019, 1091
BfuI GTATCC 1 cut(s) 360
BisI GCNGC 2 cut(s) 984, 1228
BlsI GCNGC 2 cut(s) 985, 1229
BmcAI AGTACT 1 cut(s) 664
Bme18I GGWCC 2 cut(s) 399, 482
BmeRI GACNNNNNGTC 1 cut(s) 488
BmeT110I CYCGRG 1 cut(s) 1010
BmgBI CACGTC 1 cut(s) 746
BmgT120I GGNCC 3 cut(s) 147, 399, 482
BmiI GGNNCC 2 cut(s) 474, 990
BmsI GCATC 3 cut(s) 130, 894, 1315
BpiI GAAGAC 1 cut(s) 639
Bpu10I CCTNAGC 1 cut(s) 1396
Bpu14I TTCGAA 1 cut(s) 794
BsaBI GATNNNNATC 1 cut(s) 1329
BsaJI CCNNGG 3 cut(s) 195, 984, 1096
BsaWI WCCGGW 1 cut(s) 371
BsaXI ACNNNNNCTCC 2 cut(s) 290, 320
Bsc4I CCNNNNNNNGG 4 cut(s) 155, 201, 491, 712
Bse1I ACTGG 2 cut(s) 641, 717
Bse3DI GCAATG 1 cut(s) 1364
Bse8I GATNNNNATC 1 cut(s) 1329
BseDI CCNNGG 3 cut(s) 195, 984, 1096
BseGI GGATG 2 cut(s) 703, 1268
BseJI GATNNNNATC 1 cut(s) 1329
BseLI CCNNNNNNNGG 4 cut(s) 155, 201, 491, 712
BseMI GCAATG 1 cut(s) 1364
BseMII CTCAG 5 cut(s) 260, 622, 744, 1016, 1410
BseNI ACTGG 2 cut(s) 641, 717
BseRI GAGGAG 1 cut(s) 358
BseSI GKGCMC 2 cut(s) 363, 993
BsgI GTGCAG 1 cut(s) 1271
Bsh1236I CGCG 1 cut(s) 986
Bsh1285I CGRYCG 1 cut(s) 557
BshFI GGCC 4 cut(s) 148, 917, 1095, 1394
BshNI GGYRCC 1 cut(s) 988
BsiEI CGRYCG 1 cut(s) 557
BsiHKAI GWGCWC 1 cut(s) 1188
BsiHKCI CYCGRG 1 cut(s) 1010
BsiSI CCGG 1 cut(s) 372
BslFI GGGAC 2 cut(s) 213, 248
BslI CCNNNNNNNGG 4 cut(s) 155, 201, 491, 712
BsmAI GTCTC 3 cut(s) 69, 310, 1009
BsmFI GGGAC 2 cut(s) 213, 248
BsmI GAATGC 2 cut(s) 860, 1289
BsnI GGCC 4 cut(s) 148, 917, 1095, 1394
BsoBI CYCGRG 1 cut(s) 1010
Bsp119I TTCGAA 1 cut(s) 794
Bsp1286I GDGCHC 3 cut(s) 363, 993, 1188
Bsp1407I TGTACA 1 cut(s) 923
Bsp143I GATC 8 cut(s) 285, 379, 472, 495, 554, 809, 1174, 1194
BspACI CCGC 4 cut(s) 315, 984, 986, 1228
BspANI GGCC 4 cut(s) 148, 917, 1095, 1394
BspCNI CTCAG 5 cut(s) 259, 621, 743, 1015, 1409
BspFNI CGCG 1 cut(s) 986
BspHI TCATGA 2 cut(s) 282, 1270
BspLI GGNNCC 2 cut(s) 474, 990
BspPI GGATC 4 cut(s) 467, 480, 503, 804
BspT104I TTCGAA 1 cut(s) 794
BspT107I GGYRCC 1 cut(s) 988
BsrDI GCAATG 1 cut(s) 1364
BsrGI TGTACA 1 cut(s) 923
BsrI ACTGG 2 cut(s) 641, 717
BssECI CCNNGG 3 cut(s) 195, 984, 1096
BssMI GATC 8 cut(s) 285, 379, 472, 495, 554, 809, 1174, 1194
BssT1I CCWWGG 1 cut(s) 1096
Bst4CI ACNGT 4 cut(s) 13, 204, 928, 1035
BstAUI TGTACA 1 cut(s) 923
BstBI TTCGAA 1 cut(s) 794
BstC8I GCNNGC 2 cut(s) 27, 858
BstDEI CTNAG 6 cut(s) 154, 246, 608, 730, 1002, 1396
BstDSI CCRYGG 2 cut(s) 195, 984
BstF5I GGATG 2 cut(s) 703, 1268
BstFNI CGCG 1 cut(s) 986
BstHHI GCGC 1 cut(s) 1148
BstKTI GATC 8 cut(s) 288, 382, 475, 498, 557, 812, 1177, 1197
BstMAI GTCTC 3 cut(s) 69, 310, 1009
BstMBI GATC 8 cut(s) 285, 379, 472, 495, 554, 809, 1174, 1194
BstMCI CGRYCG 1 cut(s) 557
BstMWI GCNNNNNNNGC 2 cut(s) 581, 590
BstNSI RCATGY 2 cut(s) 860, 1309
BstSLI GKGCMC 2 cut(s) 363, 993
BstUI CGCG 1 cut(s) 986
BstV2I GAAGAC 1 cut(s) 639
BstX2I RGATCY 2 cut(s) 472, 809
BstYI RGATCY 2 cut(s) 472, 809
BsuI GTATCC 1 cut(s) 360
BsuRI GGCC 4 cut(s) 148, 917, 1095, 1394
BtgI CCRYGG 2 cut(s) 195, 984
BtrI CACGTC 1 cut(s) 746
BtsCI GGATG 2 cut(s) 703, 1268
BtsI GCAGTG 2 cut(s) 978, 1352
BtsIMutI CAGTG 5 cut(s) 616, 886, 933, 978, 1352
Cac8I GCNNGC 2 cut(s) 27, 858
CciI TCATGA 2 cut(s) 282, 1270
CfoI GCGC 1 cut(s) 1148
Cfr13I GGNCC 3 cut(s) 147, 399, 482
Cfr42I CCGCGG 1 cut(s) 987
Csp6I GTAC 4 cut(s) 207, 663, 924, 1372
CspCI CAANNNNNGTGG 2 cut(s) 391, 426
CviAII CATG 9 cut(s) 283, 479, 488, 857, 962, 1190, 1271, 1306, 1415
CviQI GTAC 4 cut(s) 207, 663, 924, 1372
DdeI CTNAG 6 cut(s) 154, 246, 608, 730, 1002, 1396
DpnI GATC 8 cut(s) 287, 381, 474, 497, 556, 811, 1176, 1196
DpnII GATC 8 cut(s) 285, 379, 472, 495, 554, 809, 1174, 1194
DriI GACNNNNNGTC 1 cut(s) 488
Eam1105I GACNNNNNGTC 1 cut(s) 488
Eco130I CCWWGG 1 cut(s) 1096
Eco47I GGWCC 2 cut(s) 399, 482
Eco57I CTGAAG 2 cut(s) 279, 295
Eco88I CYCGRG 1 cut(s) 1010
EcoRI GAATTC 2 cut(s) 779, 796
EcoT14I CCWWGG 1 cut(s) 1096
EcoT22I ATGCAT 1 cut(s) 862
ErhI CCWWGG 1 cut(s) 1096
FaeI CATG 9 cut(s) 286, 482, 491, 860, 965, 1193, 1274, 1309, 1418
FalI AAGNNNNNCTT 2 cut(s) 1151, 1183
FaqI GGGAC 2 cut(s) 213, 248
FatI CATG 9 cut(s) 282, 478, 487, 856, 961, 1189, 1270, 1305, 1414
Fnu4HI GCNGC 2 cut(s) 984, 1228
FokI GGATG 2 cut(s) 710, 1275
Fsp4HI GCNGC 2 cut(s) 984, 1228
FspBI CTAG 6 cut(s) 383, 405, 531, 735, 1019, 1091
FspI TGCGCA 1 cut(s) 1147
GlaI GCGC 1 cut(s) 1147
GluI GCNGC 2 cut(s) 984, 1228
HaeIII GGCC 4 cut(s) 148, 917, 1095, 1394
HapII CCGG 1 cut(s) 372
HhaI GCGC 1 cut(s) 1148
Hin1II CATG 9 cut(s) 286, 482, 491, 860, 965, 1193, 1274, 1309, 1418
Hin6I GCGC 1 cut(s) 1146
HinP1I GCGC 1 cut(s) 1146
HinfI GANTC 3 cut(s) 236, 1125, 1164
HpaII CCGG 1 cut(s) 372
HphI GGTGA 5 cut(s) 149, 163, 243, 668, 1292
Hpy166II GTNNAC 4 cut(s) 207, 276, 924, 973
Hpy188I TCNGA 3 cut(s) 298, 802, 1005
Hpy188III TCNNGA 5 cut(s) 283, 493, 1012, 1107, 1271
Hpy8I GTNNAC 4 cut(s) 207, 276, 924, 973
Hpy99I CGWCG 1 cut(s) 1035
HpyAV CCTTC 4 cut(s) 264, 319, 556, 1080
HpyCH4III ACNGT 4 cut(s) 13, 204, 928, 1035
HpyCH4IV ACGT 1 cut(s) 745
HpyF10VI GCNNNNNNNGC 2 cut(s) 581, 590
HpyF3I CTNAG 6 cut(s) 154, 246, 608, 730, 1002, 1396
HpySE526I ACGT 1 cut(s) 745
Hsp92II CATG 9 cut(s) 286, 482, 491, 860, 965, 1193, 1274, 1309, 1418
HspAI GCGC 1 cut(s) 1146
KspI CCGCGG 1 cut(s) 987
Kzo9I GATC 8 cut(s) 285, 379, 472, 495, 554, 809, 1174, 1194
LweI GCATC 3 cut(s) 130, 894, 1315
MaeI CTAG 6 cut(s) 383, 405, 531, 735, 1019, 1091
MaeII ACGT 1 cut(s) 745
MaeIII GTNAC 2 cut(s) 249, 715
MalI GATC 8 cut(s) 287, 381, 474, 497, 556, 811, 1176, 1196
MboI GATC 8 cut(s) 285, 379, 472, 495, 554, 809, 1174, 1194
MboII GAAGA 6 cut(s) 34, 43, 644, 856, 886, 1228
MfeI CAATTG 4 cut(s) 354, 394, 720, 1149
MflI RGATCY 2 cut(s) 472, 809
MhlI GDGCHC 3 cut(s) 363, 993, 1188
MlyI GAGTC 2 cut(s) 230, 1134
Mph1103I ATGCAT 1 cut(s) 862
MroXI GAANNNNTTC 1 cut(s) 188
MseI TTAA 3 cut(s) 687, 1223, 1367
MslI CAYNNNNRTG 3 cut(s) 281, 966, 1357
MspA1I CMGCKG 2 cut(s) 315, 986
MspI CCGG 1 cut(s) 372
MunI CAATTG 4 cut(s) 354, 394, 720, 1149
Mva1269I GAATGC 2 cut(s) 860, 1289
MvnI CGCG 1 cut(s) 986
MwoI GCNNNNNNNGC 2 cut(s) 581, 590
NdeII GATC 8 cut(s) 285, 379, 472, 495, 554, 809, 1174, 1194
NlaIII CATG 9 cut(s) 286, 482, 491, 860, 965, 1193, 1274, 1309, 1418
NlaIV GGNNCC 2 cut(s) 474, 990
NmuCI GTSAC 1 cut(s) 249
NsbI TGCGCA 1 cut(s) 1147
NsiI ATGCAT 1 cut(s) 862
NspI RCATGY 2 cut(s) 860, 1309
NspV TTCGAA 1 cut(s) 794
PaeI GCATGC 1 cut(s) 860
PaeR7I CTCGAG 1 cut(s) 1010
PagI TCATGA 2 cut(s) 282, 1270
PctI GAATGC 2 cut(s) 860, 1289
PdmI GAANNNNTTC 1 cut(s) 188
PfeI GAWTC 1 cut(s) 1164
PflFI GACNNNGTC 1 cut(s) 302
PkrI GCNGC 2 cut(s) 985, 1229
Ple19I CGATCG 1 cut(s) 557
PleI GAGTC 2 cut(s) 230, 1133
PpsI GAGTC 2 cut(s) 230, 1133
PsiI TTATAA 1 cut(s) 1119
PspN4I GGNNCC 2 cut(s) 474, 990
PspPI GGNCC 3 cut(s) 147, 399, 482
PsuI RGATCY 2 cut(s) 472, 809
PsyI GACNNNGTC 1 cut(s) 302
PvuI CGATCG 1 cut(s) 557
RsaI GTAC 4 cut(s) 208, 664, 925, 1373
RsaNI GTAC 4 cut(s) 207, 663, 924, 1372
RseI CAYNNNNRTG 3 cut(s) 281, 966, 1357
SacII CCGCGG 1 cut(s) 987
SaqAI TTAA 3 cut(s) 687, 1223, 1367
SatI GCNGC 2 cut(s) 984, 1228
Sau3AI GATC 8 cut(s) 285, 379, 472, 495, 554, 809, 1174, 1194
Sau96I GGNCC 3 cut(s) 147, 399, 482
ScaI AGTACT 1 cut(s) 664
SchI GAGTC 2 cut(s) 230, 1134
SduI GDGCHC 3 cut(s) 363, 993, 1188
SfaNI GCATC 3 cut(s) 130, 894, 1315
Sfr274I CTCGAG 1 cut(s) 1010
Sfr303I CCGCGG 1 cut(s) 987
SfuI TTCGAA 1 cut(s) 794
SgrBI CCGCGG 1 cut(s) 987
SinI GGWCC 2 cut(s) 399, 482
SlaI CTCGAG 1 cut(s) 1010
SmiMI CAYNNNNRTG 3 cut(s) 281, 966, 1357
SmlI CTYRAG 1 cut(s) 1010
SmoI CTYRAG 1 cut(s) 1010
SpeI ACTAGT 1 cut(s) 404
SphI GCATGC 1 cut(s) 860
SsiI CCGC 4 cut(s) 315, 984, 986, 1228
SspMI CTAG 6 cut(s) 383, 405, 531, 735, 1019, 1091
StyI CCWWGG 1 cut(s) 1096
TaaI ACNGT 4 cut(s) 13, 204, 928, 1035
TaiI ACGT 1 cut(s) 748
TaqI TCGA 5 cut(s) 182, 288, 557, 794, 1011
TatI WGTACW 3 cut(s) 206, 662, 923
TauI GCSGC 2 cut(s) 986, 1230
TfiI GAWTC 1 cut(s) 1164
Tru1I TTAA 3 cut(s) 687, 1223, 1367
Tru9I TTAA 3 cut(s) 687, 1223, 1367
TscAI CASTG 5 cut(s) 616, 886, 933, 985, 1359
TseFI GTSAC 1 cut(s) 249
Tsp45I GTSAC 1 cut(s) 249
TspDTI ATGAA 5 cut(s) 34, 75, 271, 819, 1224
TspRI CASTG 5 cut(s) 616, 886, 933, 985, 1359
Tth111I GACNNNGTC 1 cut(s) 302
VpaK11BI GGWCC 2 cut(s) 399, 482
XapI RAATTY 4 cut(s) 56, 779, 796, 1363
XceI RCATGY 2 cut(s) 860, 1309
XhoI CTCGAG 1 cut(s) 1010
XmnI GAANNNNTTC 1 cut(s) 188
XspI CTAG 6 cut(s) 383, 405, 531, 735, 1019, 1091
ZrmI AGTACT 1 cut(s) 664
Zsp2I ATGCAT 1 cut(s) 862
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.