Rorug02G0150400

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
13270076 .. 13273795
3720 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0150400.1

Sequence Viewer

Length: 858 bp
ATGGCGGCGGCGGCCTGTGATTCTGTACTATATGTTTGGCCGGAGAGCGTCGTCGAAGCGGAGATTTCTCCAAGTCAAGATCGGCGAGGAGGAGGCTTTCTCGGCGACCGGCTCAGGCGCCGGCCACGGGAATTTACTGCTTCACCTGTGCAGGGGAATTTACAAGTGGCGAGTGTGTATGCTGGTAGTGATAAGTCCGGCGGTTTCTCTATGGAAGATGTCCTTTTTCAGAAGCCCAAGGCTGCGCTTCTGAAGCCTGCGTTCACCATTCTATGTGATAAAGATTCAAAATGCTTTCTTATGTTGATACGTGGTACACATAGTATCAAAGATACACTAACTGCCACAACTGGTGCAGTGGCCCCTTTCCACCATTCGGTTTTGGATGATGGTGGAATAAGCAACTTAGTCCTAGGATATGCTCACTGTGGGATGGTTGCTGCAGCCCGTTGGATTGCTCAGCTCAGTACTCCTTGCTTGCTTAAGGCTCTTGGTGAATATCCTGAGTATACAGTAAAGCTTGGGATTTCGGGGAGTGTTCGTCCTGATACAAGTCAGAGATGGGCTAGAGAAGTGGAAGAGCAAAAGCTTATTGGCAGTGGAGCACTGGATTTGCAGGGACATGCCTCCAATATATGGAGCAACCAGCTGAACACACACTGGCTGACAGATTTGGGAATGCATAAGCAGAAGAAAAAAAGAGGAGCAGCAGGAGCAAGCATTAGTCATGGCCGAAGTGGGCAAGCAATCATAAATAGTCCAATAAACACTGATCCATTTCTAGCAACTAATGTATTTGCCCTTGATGCAATGTTAAACAATAAATTGTCACATATTCATGATTTTGTGGAACAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

285

Amino Acids

30.83

Weight (kDa)

8.25

Isoelectric Point (pI)

48.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipase_3 PF01764 101 - 173 4.8e-06 Lipase (class 3)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 117
AccB7I CCANNNNNTGG 1 cut(s) 636
AccI GTMKAC 1 cut(s) 509
AciI CCGC 5 cut(s) 5, 8, 11, 59, 201
AclWI GGATC 1 cut(s) 767
AcoI YGGCCR 3 cut(s) 38, 122, 730
AcsI RAATTY 2 cut(s) 131, 157
AcuI CTGAAG 1 cut(s) 272
AcyI GRCGYC 1 cut(s) 118
AfaI GTAC 3 cut(s) 27, 316, 469
AfiI CCNNNNNNNGG 4 cut(s) 127, 152, 376, 636
AflII CTTAAG 1 cut(s) 482
AgsI TTSAA 1 cut(s) 288
AluBI AGCT 4 cut(s) 463, 520, 589, 649
AluI AGCT 4 cut(s) 463, 520, 589, 649
Alw21I GWGCWC 1 cut(s) 607
AlwI GGATC 1 cut(s) 767
AoxI GGCC 5 cut(s) 12, 38, 122, 360, 730
ApeKI GCWGC 4 cut(s) 242, 440, 443, 707
ApoI RAATTY 2 cut(s) 131, 157
AspA2I CCTAGG 1 cut(s) 412
AspLEI GCGC 2 cut(s) 120, 247
AspS9I GGNCC 1 cut(s) 361
AsuHPI GGTGA 3 cut(s) 135, 256, 506
AvrII CCTAGG 1 cut(s) 412
BanI GGYRCC 1 cut(s) 117
Bbv12I GWGCWC 1 cut(s) 607
BbvI GCAGC 4 cut(s) 229, 427, 455, 719
BccI CCATC 3 cut(s) 383, 427, 555
BfaI CTAG 3 cut(s) 413, 567, 782
BfmI CTRYAG 1 cut(s) 441
BfoI RGCGCY 1 cut(s) 121
BfrI CTTAAG 1 cut(s) 482
BisI GCNGC 7 cut(s) 6, 9, 12, 243, 441, 444, 708
BlnI CCTAGG 1 cut(s) 412
BlpI GCTNAGC 1 cut(s) 459
BlsI GCNGC 7 cut(s) 7, 10, 13, 244, 442, 445, 709
BmcAI AGTACT 1 cut(s) 469
BmgT120I GGNCC 1 cut(s) 361
BmiI GGNNCC 2 cut(s) 119, 363
BmsI GCATC 1 cut(s) 796
BplI GAGNNNNNCTC 2 cut(s) 84, 116
Bpu10I CCTNAGC 1 cut(s) 113
Bpu1102I GCTNAGC 1 cut(s) 459
BsaAI YACGTR 1 cut(s) 311
BsaHI GRCGYC 1 cut(s) 118
BsaJI CCNNGG 3 cut(s) 125, 237, 412
BsaXI ACNNNNNCTCC 2 cut(s) 526, 556
Bsc4I CCNNNNNNNGG 4 cut(s) 127, 152, 376, 636
Bse118I RCCGGY 2 cut(s) 108, 120
Bse1I ACTGG 3 cut(s) 355, 612, 665
Bse3DI GCAATG 1 cut(s) 816
BseDI CCNNGG 3 cut(s) 125, 237, 412
BseGI GGATG 2 cut(s) 391, 438
BseLI CCNNNNNNNGG 4 cut(s) 127, 152, 376, 636
BseMI GCAATG 1 cut(s) 816
BseMII CTCAG 4 cut(s) 127, 473, 478, 495
BseNI ACTGG 3 cut(s) 355, 612, 665
BseRI GAGGAG 3 cut(s) 102, 105, 717
BseXI GCAGC 4 cut(s) 229, 427, 455, 719
BsgI GTGCAG 2 cut(s) 170, 375
Bsh1285I CGRYCG 1 cut(s) 109
BshFI GGCC 5 cut(s) 14, 40, 124, 362, 732
BshNI GGYRCC 1 cut(s) 117
BsiEI CGRYCG 1 cut(s) 109
BsiHKAI GWGCWC 1 cut(s) 607
BsiSI CCGG 4 cut(s) 41, 109, 121, 198
BslFI GGGAC 1 cut(s) 633
BslI CCNNNNNNNGG 4 cut(s) 127, 152, 376, 636
BsmFI GGGAC 1 cut(s) 633
BsmI GAATGC 1 cut(s) 684
BsnI GGCC 5 cut(s) 14, 40, 124, 362, 732
Bsp1286I GDGCHC 1 cut(s) 607
Bsp143I GATC 2 cut(s) 79, 772
Bsp1720I GCTNAGC 1 cut(s) 459
BspACI CCGC 5 cut(s) 5, 8, 11, 59, 201
BspANI GGCC 5 cut(s) 14, 40, 124, 362, 732
BspCNI CTCAG 4 cut(s) 126, 472, 477, 496
BspHI TCATGA 1 cut(s) 838
BspLI GGNNCC 2 cut(s) 119, 363
BspMAI CTGCAG 1 cut(s) 445
BspPI GGATC 1 cut(s) 767
BspQI GCTCTTC 1 cut(s) 573
BspT107I GGYRCC 1 cut(s) 117
BspTI CTTAAG 1 cut(s) 482
BsrDI GCAATG 1 cut(s) 816
BsrFI RCCGGY 2 cut(s) 108, 120
BsrI ACTGG 3 cut(s) 355, 612, 665
BssAI RCCGGY 2 cut(s) 108, 120
BssECI CCNNGG 3 cut(s) 125, 237, 412
BssMI GATC 2 cut(s) 79, 772
BssNAI GTATAC 1 cut(s) 510
BssNI GRCGYC 1 cut(s) 118
BssT1I CCWWGG 2 cut(s) 237, 412
Bst1107I GTATAC 1 cut(s) 510
Bst4CI ACNGT 2 cut(s) 428, 514
Bst6I CTCTTC 1 cut(s) 573
BstACI GRCGYC 1 cut(s) 118
BstAFI CTTAAG 1 cut(s) 482
BstBAI YACGTR 1 cut(s) 311
BstC8I GCNNGC 5 cut(s) 122, 258, 479, 718, 744
BstDEI CTNAG 5 cut(s) 113, 406, 459, 464, 504
BstDSI CCRYGG 1 cut(s) 125
BstF5I GGATG 2 cut(s) 391, 438
BstH2I RGCGCY 1 cut(s) 121
BstHHI GCGC 2 cut(s) 120, 247
BstKTI GATC 2 cut(s) 82, 775
BstMBI GATC 2 cut(s) 79, 772
BstMCI CGRYCG 1 cut(s) 109
BstMWI GCNNNNNNNGC 5 cut(s) 11, 102, 253, 713, 806
BstNSI RCATGY 1 cut(s) 626
BstSFI CTRYAG 1 cut(s) 441
BstV1I GCAGC 4 cut(s) 229, 427, 455, 719
BstZ17I GTATAC 1 cut(s) 510
BsuRI GGCC 5 cut(s) 14, 40, 124, 362, 732
BtgI CCRYGG 1 cut(s) 125
BtsCI GGATG 2 cut(s) 391, 438
BtsI GCAGTG 2 cut(s) 363, 604
BtsIMutI CAGTG 6 cut(s) 363, 424, 604, 605, 658, 768
Cac8I GCNNGC 5 cut(s) 122, 258, 479, 718, 744
CciI TCATGA 1 cut(s) 838
CfoI GCGC 2 cut(s) 120, 247
Cfr10I RCCGGY 2 cut(s) 108, 120
Cfr13I GGNCC 1 cut(s) 361
CseI GACGC 1 cut(s) 37
Csp6I GTAC 3 cut(s) 26, 315, 468
CviAII CATG 3 cut(s) 623, 728, 839
CviQI GTAC 3 cut(s) 26, 315, 468
DdeI CTNAG 5 cut(s) 113, 406, 459, 464, 504
DinI GGCGCC 1 cut(s) 119
DpnI GATC 2 cut(s) 81, 774
DpnII GATC 2 cut(s) 79, 772
EaeI YGGCCR 3 cut(s) 38, 122, 730
Eam1104I CTCTTC 1 cut(s) 573
EarI CTCTTC 1 cut(s) 573
Eco130I CCWWGG 2 cut(s) 237, 412
Eco57I CTGAAG 1 cut(s) 272
EcoT14I CCWWGG 2 cut(s) 237, 412
EcoT22I ATGCAT 1 cut(s) 684
EgeI GGCGCC 1 cut(s) 119
EheI GGCGCC 1 cut(s) 119
ErhI CCWWGG 2 cut(s) 237, 412
FaeI CATG 3 cut(s) 626, 731, 842
FalI AAGNNNNNCTT 2 cut(s) 207, 239
FaqI GGGAC 1 cut(s) 633
FatI CATG 3 cut(s) 622, 727, 838
FblI GTMKAC 1 cut(s) 509
Fnu4HI GCNGC 7 cut(s) 6, 9, 12, 243, 441, 444, 708
FokI GGATG 2 cut(s) 398, 445
Fsp4HI GCNGC 7 cut(s) 6, 9, 12, 243, 441, 444, 708
FspBI CTAG 3 cut(s) 413, 567, 782
GlaI GCGC 2 cut(s) 119, 246
GluI GCNGC 7 cut(s) 6, 9, 12, 243, 441, 444, 708
HaeII RGCGCY 1 cut(s) 121
HaeIII GGCC 5 cut(s) 14, 40, 124, 362, 732
HapII CCGG 4 cut(s) 41, 109, 121, 198
HgaI GACGC 1 cut(s) 37
HhaI GCGC 2 cut(s) 120, 247
Hin1I GRCGYC 1 cut(s) 118
Hin1II CATG 3 cut(s) 626, 731, 842
Hin6I GCGC 2 cut(s) 118, 245
HinP1I GCGC 2 cut(s) 118, 245
HindIII AAGCTT 2 cut(s) 518, 587
HinfI GANTC 2 cut(s) 20, 284
HpaII CCGG 4 cut(s) 41, 109, 121, 198
HphI GGTGA 3 cut(s) 135, 256, 506
Hpy166II GTNNAC 3 cut(s) 264, 317, 510
Hpy188I TCNGA 3 cut(s) 231, 252, 558
Hpy188III TCNNGA 4 cut(s) 77, 503, 545, 839
Hpy8I GTNNAC 3 cut(s) 264, 317, 510
Hpy99I CGWCG 2 cut(s) 53, 56
HpyCH4III ACNGT 2 cut(s) 428, 514
HpyCH4IV ACGT 1 cut(s) 310
HpyCH4V TGCA 6 cut(s) 151, 356, 443, 616, 682, 809
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 102, 253, 713, 806
HpyF3I CTNAG 5 cut(s) 113, 406, 459, 464, 504
HpySE526I ACGT 1 cut(s) 310
Hsp92I GRCGYC 1 cut(s) 118
Hsp92II CATG 3 cut(s) 626, 731, 842
HspAI GCGC 2 cut(s) 118, 245
KasI GGCGCC 1 cut(s) 117
KroI GCCGGC 1 cut(s) 120
KroNI GCCGGC 1 cut(s) 122
Kzo9I GATC 2 cut(s) 79, 772
LguI GCTCTTC 1 cut(s) 573
LmnI GCTCC 4 cut(s) 602, 639, 704, 713
Lsp1109I GCAGC 4 cut(s) 229, 427, 455, 719
LweI GCATC 1 cut(s) 796
MaeI CTAG 3 cut(s) 413, 567, 782
MaeII ACGT 1 cut(s) 310
MaeIII GTNAC 1 cut(s) 828
MalI GATC 2 cut(s) 81, 774
MboI GATC 2 cut(s) 79, 772
MboII GAAGA 3 cut(s) 227, 590, 703
MhlI GDGCHC 1 cut(s) 607
MluCI AATT 3 cut(s) 131, 157, 824
Mly113I GGCGCC 1 cut(s) 118
MmeI TCCRAC 1 cut(s) 431
MnlI CCTC 5 cut(s) 80, 83, 86, 637, 695
Mph1103I ATGCAT 1 cut(s) 684
MroNI GCCGGC 1 cut(s) 120
MseI TTAA 2 cut(s) 483, 815
MslI CAYNNNNRTG 1 cut(s) 837
MspA1I CMGCKG 1 cut(s) 649
MspCI CTTAAG 1 cut(s) 482
MspI CCGG 4 cut(s) 41, 109, 121, 198
Mva1269I GAATGC 1 cut(s) 684
MwoI GCNNNNNNNGC 5 cut(s) 11, 102, 253, 713, 806
NaeI GCCGGC 1 cut(s) 122
NarI GGCGCC 1 cut(s) 118
NdeII GATC 2 cut(s) 79, 772
NgoMIV GCCGGC 1 cut(s) 120
NlaIII CATG 3 cut(s) 626, 731, 842
NlaIV GGNNCC 2 cut(s) 119, 363
NmeAIII GCCGAG 1 cut(s) 81
NmuCI GTSAC 1 cut(s) 828
NsiI ATGCAT 1 cut(s) 684
NspI RCATGY 1 cut(s) 626
PagI TCATGA 1 cut(s) 838
PciSI GCTCTTC 1 cut(s) 573
PctI GAATGC 1 cut(s) 684
PdiI GCCGGC 1 cut(s) 122
PfeI GAWTC 2 cut(s) 20, 284
PflMI CCANNNNNTGG 1 cut(s) 636
PkrI GCNGC 7 cut(s) 7, 10, 13, 244, 442, 445, 709
PluTI GGCGCC 1 cut(s) 121
Ppu21I YACGTR 1 cut(s) 311
PspN4I GGNNCC 2 cut(s) 119, 363
PspPI GGNCC 1 cut(s) 361
PstI CTGCAG 1 cut(s) 445
PvuII CAGCTG 1 cut(s) 649
RsaI GTAC 3 cut(s) 27, 316, 469
RsaNI GTAC 3 cut(s) 26, 315, 468
RseI CAYNNNNRTG 1 cut(s) 837
SapI GCTCTTC 1 cut(s) 573
SaqAI TTAA 2 cut(s) 483, 815
SatI GCNGC 7 cut(s) 6, 9, 12, 243, 441, 444, 708
Sau3AI GATC 2 cut(s) 79, 772
Sau96I GGNCC 1 cut(s) 361
ScaI AGTACT 1 cut(s) 469
SduI GDGCHC 1 cut(s) 607
SetI ASST 6 cut(s) 148, 313, 465, 522, 591, 651
SfaNI GCATC 1 cut(s) 796
SfcI CTRYAG 1 cut(s) 441
SfoI GGCGCC 1 cut(s) 119
SmiMI CAYNNNNRTG 1 cut(s) 837
SmlI CTYRAG 1 cut(s) 482
SmoI CTYRAG 1 cut(s) 482
Sse9I AATT 3 cut(s) 131, 157, 824
SsiI CCGC 5 cut(s) 5, 8, 11, 59, 201
SspDI GGCGCC 1 cut(s) 117
SspMI CTAG 3 cut(s) 413, 567, 782
StyI CCWWGG 2 cut(s) 237, 412
TaaI ACNGT 2 cut(s) 428, 514
TaiI ACGT 1 cut(s) 313
TaqI TCGA 1 cut(s) 54
TasI AATT 3 cut(s) 131, 157, 824
TatI WGTACW 2 cut(s) 25, 467
TauI GCSGC 3 cut(s) 8, 11, 14
TfiI GAWTC 2 cut(s) 20, 284
Tru1I TTAA 2 cut(s) 483, 815
Tru9I TTAA 2 cut(s) 483, 815
TscAI CASTG 6 cut(s) 363, 431, 604, 612, 665, 775
TseFI GTSAC 1 cut(s) 828
TseI GCWGC 4 cut(s) 242, 440, 443, 707
Tsp45I GTSAC 1 cut(s) 828
TspDTI ATGAA 1 cut(s) 827
TspRI CASTG 6 cut(s) 363, 431, 604, 612, 665, 775
Van91I CCANNNNNTGG 1 cut(s) 636
Vha464I CTTAAG 1 cut(s) 482
XapI RAATTY 2 cut(s) 131, 157
XceI RCATGY 1 cut(s) 626
XmaJI CCTAGG 1 cut(s) 412
XmiI GTMKAC 1 cut(s) 509
XspI CTAG 3 cut(s) 413, 567, 782
ZrmI AGTACT 1 cut(s) 469
Zsp2I ATGCAT 1 cut(s) 684
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.