RchiOBHm_Chr5g0032631

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
26371643 .. 26373184
1542 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31181

Sequence Viewer

Length: 1542 bp
ATGGCTTGGTCTGGAGATATTCCGAATGCAAAAATCAACAGTGCTTCGATTAGTTATAACTCCAGCTCAAAAAATCTTAGTGTTGCATACACCACTTTTGTGAATGATACAGCTGGTATCCAAAAGCAAGTGATCAGATATCTTAATTACGTGGTTGATCTGAAACAGTACTTGCCCGATTGGGTAATTGTTGGGTTCTCTGCTGCAGCCGGTGATAGGATTGCTTTGTCCGAGATCATCTCATGGAATTTCACTTCGACTTCTATCGTTGATGAGATTGTTCATGCGACAGACACTGCACCAGCAACACGGAACCCTGATACAGTTGAACAAAAGTCAAGAAATAACAATATACCACGAATTGCTGTGGGGCTAGGTGTTGGTGGAAGTATCTTGGTAGCGGGGTTGGCTTTAGTTTGGTTCATCTTTCGGAGGAAGAGGCAAGCACTTAAAAATGATGAACGTTCTATGGTGGCACTCAATGACGAGTTCGAAAGGGGAACAGGCCCCAGGAAGTTTTTGTACAGCGAGTTGGCTAGAGCCACGAGTAATTTTGATGAAGGAGACAAGCTTGGAGAGGGAGGATTTGGTGGAGTCTATAGAGGATTCATAAAAGACTTGAACACATATGTTGCTGTTAAGAGGGTCTCCAAGGGATCCAAACAAGGGCTAAAGGAGTACGCAGCCGAAGTCAGGATCATCGGTCAACTTAGACATCGAAACCTTGTGCAACTCATTGGTTGGTGTCACGAAAACGGAGATCTCCTACTTGTGTATGAGTTCATGCCCCACGGCAGTTTAGATTCTTATTTGTTCAAAGCAGAAGGCTTCTTGAATTGGGAGGTAAGATACAAAATTGCTCTTGGCTTGGCCAGCGGTGTTCTTTATCTACACGAAGGATGCGAACAATGTATACTGCACAGAGATATCAAATCAAGCAATGTTATGTTGGATTTGAATTTCAACGTAAAACTTGGAGATTTCGGCCTAGCTAGACTTGTGGAGCACGAAAGAGGATCGCTAACAACGATTGTGGCTGGAACTAGGGGCTACATGGCTCTTGATTATGTTGTCACAGGCAAGGCTAGCAAGGAGTCAGATGTCTATAGCTTCGGAGTTGTTGCTTTGGAAATAGCTTGTGGGAGAAGATCCATGGATTTCGATTTGGAAAGTAAGAGGATCAACTTAGTGGAGTGGGTGTGGCAGCTTTATGGAGAAGAGAGACTTATTGAAGCAGCTGACCCAAAATTGTGTGGAGATTTTGATGAGAAACAAATCGAGTGTTTGATGATTGTTGGGCTCTGGTGTGCTCACCCAGACTATAATTTCAGACCTCCAATACTACAAGCGATTCAAGTGCTTAACTTCAAGGAACAATTGCCCATTCTCCCAGCAATCATGCCAATGGCCCCTTCTTTTGCTCGTCCAGTTCGGCCATTGAGTGATACTATTAGTGGTTCTGAAATAGGTCTTCCTAAGTCTTCAAATATTTCCTCAAAGTTGGCTTCATCTTCTGCAAATTATCATTCATCACCTCTTTGA

Protein Analysis

513

Amino Acids

56.93

Weight (kDa)

6.54

Isoelectric Point (pI)

33.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 6 - 92 3e-15 Legume lectin domain
Pkinase PF00069 186 - 386 8.8e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 188 - 383 9.7e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 57
AccI GTMKAC 1 cut(s) 913
AciI CCGC 2 cut(s) 401, 876
AclI AACGTT 1 cut(s) 463
AclWI GGATC 6 cut(s) 651, 664, 704, 1024, 1143, 1187
AcoI YGGCCR 2 cut(s) 870, 1433
AcsI RAATTY 2 cut(s) 247, 958
AfaI GTAC 3 cut(s) 170, 524, 680
AfiI CCNNNNNNNGG 3 cut(s) 216, 666, 693
AjnI CCWGG 1 cut(s) 509
AjuI GAANNNNNNNTTGG 2 cut(s) 1396, 1428
AleI CACNNNNGTG 1 cut(s) 98
AluBI AGCT 8 cut(s) 66, 113, 571, 992, 1110, 1136, 1207, 1238
AluI AGCT 8 cut(s) 66, 113, 571, 992, 1110, 1136, 1207, 1238
Alw21I GWGCWC 2 cut(s) 1008, 1312
Alw26I GTCTC 3 cut(s) 558, 652, 1216
AlwI GGATC 6 cut(s) 651, 664, 704, 1024, 1143, 1187
AlwNI CAGNNNCTG 1 cut(s) 296
AoxI GGCC 5 cut(s) 505, 870, 985, 1407, 1433
ApeKI GCWGC 5 cut(s) 203, 206, 683, 1204, 1235
ApoI RAATTY 2 cut(s) 247, 958
AspS9I GGNCC 2 cut(s) 506, 1408
AsuHPI GGTGA 3 cut(s) 224, 1304, 1524
AsuII TTCGAA 1 cut(s) 492
AsuNHI GCTAGC 1 cut(s) 1085
BalI TGGCCA 1 cut(s) 872
BamHI GGATCC 1 cut(s) 656
BanII GRGCYC 1 cut(s) 1302
BarI GAAGNNNNNNTAC 2 cut(s) 506, 538
BauI CACGAG 1 cut(s) 544
BbsI GAAGAC 2 cut(s) 1463, 1473
Bbv12I GWGCWC 2 cut(s) 1008, 1312
BbvI GCAGC 5 cut(s) 190, 218, 695, 1216, 1247
BceAI ACGGC 1 cut(s) 808
BcgI CGANNNNNNTGC 2 cut(s) 1339, 1373
BciT130I CCWGG 1 cut(s) 511
BciVI GTATCC 1 cut(s) 128
BclI TGATCA 1 cut(s) 132
BcoDI GTCTC 3 cut(s) 558, 652, 1216
BfaI CTAG 6 cut(s) 374, 537, 989, 993, 1044, 1086
BfmI CTRYAG 3 cut(s) 204, 598, 1105
BfuI GTATCC 1 cut(s) 128
BglII AGATCT 1 cut(s) 760
BisI GCNGC 5 cut(s) 204, 207, 684, 1205, 1236
BlsI GCNGC 5 cut(s) 205, 208, 685, 1206, 1237
BmcAI AGTACT 1 cut(s) 170
Bme1390I CCNGG 1 cut(s) 511
BmgT120I GGNCC 2 cut(s) 506, 1408
BmiI GGNNCC 4 cut(s) 314, 508, 658, 1410
BmrFI CCNGG 1 cut(s) 511
BmsI GCATC 1 cut(s) 890
BmtI GCTAGC 1 cut(s) 1089
BpiI GAAGAC 2 cut(s) 1463, 1473
BplI GAGNNNNNCTC 2 cut(s) 224, 256
BpmI CTGGAG 2 cut(s) 33, 46
Bpu14I TTCGAA 1 cut(s) 492
BsaAI YACGTR 1 cut(s) 151
BsaI GGTCTC 1 cut(s) 652
BsaJI CCNNGG 4 cut(s) 509, 651, 790, 1152
BsaXI ACNNNNNCTCC 2 cut(s) 1184, 1214
Bsc4I CCNNNNNNNGG 3 cut(s) 216, 666, 693
Bse118I RCCGGY 1 cut(s) 209
Bse1I ACTGG 1 cut(s) 1427
Bse3DI GCAATG 1 cut(s) 946
BseBI CCWGG 1 cut(s) 511
BseDI CCNNGG 4 cut(s) 509, 651, 790, 1152
BseGI GGATG 1 cut(s) 905
BseLI CCNNNNNNNGG 3 cut(s) 216, 666, 693
BseMI GCAATG 1 cut(s) 946
BseNI ACTGG 1 cut(s) 1427
BseXI GCAGC 5 cut(s) 190, 218, 695, 1216, 1247
BseYI CCCAGC 1 cut(s) 1390
BsgI GTGCAG 2 cut(s) 282, 902
BshFI GGCC 5 cut(s) 507, 872, 987, 1409, 1435
BsiHKAI GWGCWC 2 cut(s) 1008, 1312
BsiSI CCGG 1 cut(s) 210
BslI CCNNNNNNNGG 3 cut(s) 216, 666, 693
BsmAI GTCTC 3 cut(s) 558, 652, 1216
BsmI GAATGC 1 cut(s) 31
BsnI GGCC 5 cut(s) 507, 872, 987, 1409, 1435
Bso31I GGTCTC 1 cut(s) 652
Bsp119I TTCGAA 1 cut(s) 492
Bsp1286I GDGCHC 3 cut(s) 1008, 1302, 1312
Bsp1407I TGTACA 1 cut(s) 522
Bsp143I GATC 9 cut(s) 132, 157, 234, 656, 696, 760, 1016, 1148, 1179
Bsp19I CCATGG 1 cut(s) 1152
BspACI CCGC 2 cut(s) 401, 876
BspANI GGCC 5 cut(s) 507, 872, 987, 1409, 1435
BspLI GGNNCC 4 cut(s) 314, 508, 658, 1410
BspMAI CTGCAG 1 cut(s) 208
BspOI GCTAGC 1 cut(s) 1089
BspPI GGATC 6 cut(s) 651, 664, 704, 1024, 1143, 1187
BspT104I TTCGAA 1 cut(s) 492
BspTNI GGTCTC 1 cut(s) 652
BsrDI GCAATG 1 cut(s) 946
BsrFI RCCGGY 1 cut(s) 209
BsrGI TGTACA 1 cut(s) 522
BsrI ACTGG 1 cut(s) 1427
BssAI RCCGGY 1 cut(s) 209
BssECI CCNNGG 4 cut(s) 509, 651, 790, 1152
BssMI GATC 9 cut(s) 132, 157, 234, 656, 696, 760, 1016, 1148, 1179
BssNAI GTATAC 1 cut(s) 914
BssSI CACGAG 1 cut(s) 544
BssT1I CCWWGG 2 cut(s) 651, 1152
Bst1107I GTATAC 1 cut(s) 914
Bst2BI CACGAG 1 cut(s) 544
Bst2UI CCWGG 1 cut(s) 511
Bst4CI ACNGT 3 cut(s) 41, 168, 325
Bst6I CTCTTC 2 cut(s) 431, 1212
BstAUI TGTACA 1 cut(s) 522
BstBAI YACGTR 1 cut(s) 151
BstBI TTCGAA 1 cut(s) 492
BstC8I GCNNGC 3 cut(s) 444, 874, 1087
BstDEI CTNAG 4 cut(s) 77, 710, 1186, 1476
BstDSI CCRYGG 2 cut(s) 790, 1152
BstF5I GGATG 1 cut(s) 905
BstKTI GATC 9 cut(s) 135, 160, 237, 659, 699, 763, 1019, 1151, 1182
BstMAI GTCTC 3 cut(s) 558, 652, 1216
BstMBI GATC 9 cut(s) 132, 157, 234, 656, 696, 760, 1016, 1148, 1179
BstMWI GCNNNNNNNGC 3 cut(s) 407, 873, 1086
BstNI CCWGG 1 cut(s) 511
BstSCI CCNGG 1 cut(s) 509
BstSFI CTRYAG 3 cut(s) 204, 598, 1105
BstV1I GCAGC 5 cut(s) 190, 218, 695, 1216, 1247
BstV2I GAAGAC 2 cut(s) 1463, 1473
BstX2I RGATCY 3 cut(s) 656, 760, 1148
BstYI RGATCY 3 cut(s) 656, 760, 1148
BstZ17I GTATAC 1 cut(s) 914
BsuI GTATCC 1 cut(s) 128
BsuRI GGCC 5 cut(s) 507, 872, 987, 1409, 1435
BtgI CCRYGG 2 cut(s) 790, 1152
BtsCI GGATG 1 cut(s) 905
BtsI GCAGTG 1 cut(s) 294
BtsIMutI CAGTG 2 cut(s) 46, 294
Cac8I GCNNGC 3 cut(s) 444, 874, 1087
CaiI CAGNNNCTG 1 cut(s) 296
Cfr10I RCCGGY 1 cut(s) 209
Cfr13I GGNCC 2 cut(s) 506, 1408
Csp6I GTAC 3 cut(s) 169, 523, 679
CspCI CAANNNNNGTGG 2 cut(s) 1014, 1049
CviAII CATG 6 cut(s) 243, 284, 784, 1054, 1153, 1399
CviQI GTAC 3 cut(s) 169, 523, 679
DdeI CTNAG 4 cut(s) 77, 710, 1186, 1476
DpnI GATC 9 cut(s) 134, 159, 236, 658, 698, 762, 1018, 1150, 1181
DpnII GATC 9 cut(s) 132, 157, 234, 656, 696, 760, 1016, 1148, 1179
EaeI YGGCCR 2 cut(s) 870, 1433
Eam1104I CTCTTC 2 cut(s) 431, 1212
EarI CTCTTC 2 cut(s) 431, 1212
Eco130I CCWWGG 2 cut(s) 651, 1152
Eco24I GRGCYC 1 cut(s) 1302
Eco31I GGTCTC 1 cut(s) 652
Eco32I GATATC 2 cut(s) 140, 928
EcoO109I RGGNCCY 1 cut(s) 506
EcoRII CCWGG 1 cut(s) 509
EcoRV GATATC 2 cut(s) 140, 928
EcoT14I CCWWGG 2 cut(s) 651, 1152
EcoT38I GRGCYC 1 cut(s) 1302
ErhI CCWWGG 2 cut(s) 651, 1152
FaeI CATG 6 cut(s) 246, 287, 787, 1057, 1156, 1402
FalI AAGNNNNNCTT 2 cut(s) 1209, 1241
FatI CATG 6 cut(s) 242, 283, 783, 1053, 1152, 1398
FauI CCCGC 1 cut(s) 394
FauNDI CATATG 1 cut(s) 628
FbaI TGATCA 1 cut(s) 132
FblI GTMKAC 1 cut(s) 913
Fnu4HI GCNGC 5 cut(s) 204, 207, 684, 1205, 1236
FokI GGATG 1 cut(s) 912
FriOI GRGCYC 1 cut(s) 1302
Fsp4HI GCNGC 5 cut(s) 204, 207, 684, 1205, 1236
FspBI CTAG 6 cut(s) 374, 537, 989, 993, 1044, 1086
GluI GCNGC 5 cut(s) 204, 207, 684, 1205, 1236
GsaI CCCAGC 1 cut(s) 1394
GsuI CTGGAG 2 cut(s) 33, 46
HaeIII GGCC 5 cut(s) 507, 872, 987, 1409, 1435
HapII CCGG 1 cut(s) 210
Hin1II CATG 6 cut(s) 246, 287, 787, 1057, 1156, 1402
HincII GTYRAC 1 cut(s) 707
HindII GTYRAC 1 cut(s) 707
HindIII AAGCTT 1 cut(s) 569
HinfI GANTC 5 cut(s) 594, 606, 803, 1094, 1351
HpaII CCGG 1 cut(s) 210
HphI GGTGA 3 cut(s) 224, 1304, 1524
Hpy166II GTNNAC 2 cut(s) 707, 914
Hpy188I TCNGA 9 cut(s) 24, 137, 162, 232, 432, 1099, 1115, 1331, 1462
Hpy188III TCNNGA 6 cut(s) 12, 339, 694, 749, 832, 1061
Hpy8I GTNNAC 2 cut(s) 707, 914
HpyAV CCTTC 4 cut(s) 554, 818, 890, 1422
HpyCH4III ACNGT 3 cut(s) 41, 168, 325
HpyCH4IV ACGT 3 cut(s) 150, 463, 966
HpyCH4V TGCA 7 cut(s) 29, 86, 206, 299, 730, 919, 1517
HpyF10VI GCNNNNNNNGC 3 cut(s) 407, 873, 1086
HpyF3I CTNAG 4 cut(s) 77, 710, 1186, 1476
HpySE526I ACGT 3 cut(s) 150, 463, 966
Hsp92II CATG 6 cut(s) 246, 287, 787, 1057, 1156, 1402
Ksp22I TGATCA 1 cut(s) 132
Kzo9I GATC 9 cut(s) 132, 157, 234, 656, 696, 760, 1016, 1148, 1179
LmnI GCTCC 1 cut(s) 1003
Lsp1109I GCAGC 5 cut(s) 190, 218, 695, 1216, 1247
LweI GCATC 1 cut(s) 890
MaeI CTAG 6 cut(s) 374, 537, 989, 993, 1044, 1086
MaeII ACGT 3 cut(s) 150, 463, 966
MaeIII GTNAC 2 cut(s) 746, 1072
MalI GATC 9 cut(s) 134, 159, 236, 658, 698, 762, 1018, 1150, 1181
MboI GATC 9 cut(s) 132, 157, 234, 656, 696, 760, 1016, 1148, 1179
MboII GAAGA 6 cut(s) 448, 1158, 1229, 1463, 1473, 1503
MfeI CAATTG 1 cut(s) 1376
MflI RGATCY 3 cut(s) 656, 760, 1148
MhlI GDGCHC 3 cut(s) 1008, 1302, 1312
MlsI TGGCCA 1 cut(s) 872
MluNI TGGCCA 1 cut(s) 872
MlyI GAGTC 2 cut(s) 603, 1103
MmeI TCCRAC 1 cut(s) 930
Mox20I TGGCCA 1 cut(s) 872
MscI TGGCCA 1 cut(s) 872
MseI TTAA 4 cut(s) 144, 450, 639, 1362
MslI CAYNNNNRTG 2 cut(s) 98, 1403
Msp20I TGGCCA 1 cut(s) 872
MspA1I CMGCKG 3 cut(s) 113, 876, 1238
MspI CCGG 1 cut(s) 210
MspR9I CCNGG 1 cut(s) 511
MunI CAATTG 1 cut(s) 1376
Mva1269I GAATGC 1 cut(s) 31
MvaI CCWGG 1 cut(s) 511
MwoI GCNNNNNNNGC 3 cut(s) 407, 873, 1086
NcoI CCATGG 1 cut(s) 1152
NdeI CATATG 1 cut(s) 628
NdeII GATC 9 cut(s) 132, 157, 234, 656, 696, 760, 1016, 1148, 1179
NheI GCTAGC 1 cut(s) 1085
NlaIII CATG 6 cut(s) 246, 287, 787, 1057, 1156, 1402
NlaIV GGNNCC 4 cut(s) 314, 508, 658, 1410
NmuCI GTSAC 2 cut(s) 746, 1072
NspV TTCGAA 1 cut(s) 492
OliI CACNNNNGTG 1 cut(s) 98
PcsI WCGNNNNNNNCGW 2 cut(s) 900, 1025
PctI GAATGC 1 cut(s) 31
PfeI GAWTC 3 cut(s) 606, 803, 1351
PkrI GCNGC 5 cut(s) 205, 208, 685, 1206, 1237
PleI GAGTC 2 cut(s) 602, 1102
PpsI GAGTC 2 cut(s) 602, 1102
Ppu21I YACGTR 1 cut(s) 151
PsiI TTATAA 1 cut(s) 57
Psp1406I AACGTT 1 cut(s) 463
Psp6I CCWGG 1 cut(s) 509
PspFI CCCAGC 1 cut(s) 1390
PspGI CCWGG 1 cut(s) 509
PspN4I GGNNCC 4 cut(s) 314, 508, 658, 1410
PspPI GGNCC 2 cut(s) 506, 1408
PsrI GAACNNNNNNTAC 2 cut(s) 897, 929
PstI CTGCAG 1 cut(s) 208
PstNI CAGNNNCTG 1 cut(s) 296
PsuI RGATCY 3 cut(s) 656, 760, 1148
PvuII CAGCTG 2 cut(s) 113, 1238
RsaI GTAC 3 cut(s) 170, 524, 680
RsaNI GTAC 3 cut(s) 169, 523, 679
RseI CAYNNNNRTG 2 cut(s) 98, 1403
SaqAI TTAA 4 cut(s) 144, 450, 639, 1362
SatI GCNGC 5 cut(s) 204, 207, 684, 1205, 1236
Sau3AI GATC 9 cut(s) 132, 157, 234, 656, 696, 760, 1016, 1148, 1179
Sau96I GGNCC 2 cut(s) 506, 1408
ScaI AGTACT 1 cut(s) 170
SchI GAGTC 2 cut(s) 603, 1103
ScrFI CCNGG 1 cut(s) 511
SduI GDGCHC 3 cut(s) 1008, 1302, 1312
SfaNI GCATC 1 cut(s) 890
SfcI CTRYAG 3 cut(s) 204, 598, 1105
SfuI TTCGAA 1 cut(s) 492
SmiMI CAYNNNNRTG 2 cut(s) 98, 1403
SsiI CCGC 2 cut(s) 401, 876
SspI AATATT 1 cut(s) 1489
SspMI CTAG 6 cut(s) 374, 537, 989, 993, 1044, 1086
StyD4I CCNGG 1 cut(s) 509
StyI CCWWGG 2 cut(s) 651, 1152
TaaI ACNGT 3 cut(s) 41, 168, 325
TaiI ACGT 3 cut(s) 153, 466, 969
TaqI TCGA 6 cut(s) 47, 257, 492, 718, 1161, 1278
TaqII GACCGA 1 cut(s) 692
TatI WGTACW 2 cut(s) 168, 522
TfiI GAWTC 3 cut(s) 606, 803, 1351
Tru1I TTAA 4 cut(s) 144, 450, 639, 1362
Tru9I TTAA 4 cut(s) 144, 450, 639, 1362
TscAI CASTG 2 cut(s) 46, 301
TseFI GTSAC 2 cut(s) 746, 1072
TseI GCWGC 5 cut(s) 203, 206, 683, 1204, 1235
Tsp45I GTSAC 2 cut(s) 746, 1072
TspDTI ATGAA 8 cut(s) 272, 412, 474, 573, 598, 772, 1497, 1518
TspGWI ACGGA 2 cut(s) 325, 771
TspRI CASTG 2 cut(s) 46, 301
XapI RAATTY 2 cut(s) 247, 958
XmiI GTMKAC 1 cut(s) 913
XspI CTAG 6 cut(s) 374, 537, 989, 993, 1044, 1086
ZrmI AGTACT 1 cut(s) 170
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.