RchiOBHm_Chr5g0032011

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
25707367 .. 25709475
2109 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31121

Sequence Viewer

Length: 1983 bp
ATGAACACAAAATTGAAGATGGCTGTCAACATAACAGCACTCCAGTTCCTTCTTCTTCTCTTGTTTGTTTTAACCTTGTCTGCAACTCCATTGACTTTCAACTTCTCCAGCTTTCCCGCCAACACCAGGACTCTATTTCTAGAGGGAGATGCTTTCACCGACGGCTCCCTCCGACTCACCAAAAGTGCTCTTGATGACGCAAGGAACTGGAGCACCGGTAGAGCCACCTTCGGTGAATCGTTCCTCCTCCGGCAGAATGAAAAACTAGCTGATTTCACTTCAAGTTTCATATTCTCCAGTGACACCTCCAATGACCCCCTCTGCGGTGACGGCTTGGTGTTCTTCCTTGCTCCAAACGGCTCCTTACTCGACCAGGCCTTAGATAGAGGCAGCAAACTTGGCCTCCCTGTCAACACTACGCCGCCAAAATTTACCACTAGGTACTCGTTTGTGGCAGTCGAGTTTGATATCTACCCTAATAATAGGCATAATATAGGCCAACCAACAATCGAAGATCCTGATTACGATCATGTGGGGATCGACATCAACTCTGTCAAGTCTAATCTTACCACGGAATGGAGTGGTGGTATCATTGAAGGAAAACAAAATATTGCCACAATTAGCTACAACTCCAGCTCAAAAAATCTTAGTGTTGCCTTCACTACTTTTGTAGATCGTTACAGGAAAGTACAGGTGATCAAAAAAATTTATTGCTTGATTGATCTGCTTCAATACTTGCCCGATAGGGTCATTGTTGGATTCTCTGCTTCCACGGGTTATGCAGTTGCTCTGCATAAGATCATTGCATGGAATTTTACCTCCACTCTTCTGGAGGATGATAATTCGACAAACAACAATCCTCTGCCTAGCAATAGTGCGACGACGTCCAACAACAACTTAGGACTAGCAGTCGGATTGGGTGTTGGTGGATGTGTTACCTTGGTTGGTGCATTGGCTTTGGTTTGGTACTTCTTCTGCAGGAAGAAGAAGAGGGGAACAGCTGGGGAAAAAAAGCTTGGGGAAGGAGGATTTGGCCGAGTTTATAGAGGCTGCATCAAAGATTTGGACTCATATGTTGCCGTTAAGAAGATATCCCGAGGGTCTAAACAAGGGTTGAAGGAGTATGCAGCAGAAGTAAGTATCATCAGTCGGCTGAGGCATCGGAATCTAGTGCAACTAATTGGTTGGTGCCACGAAAAGAAACTCCTACTTGTCTACGAATATATGCCCAACGGAAGCTTAGATGCTCATCTGTTCAAAGAAGAAAGCATGTTAACTTGGGAGGTAAGGTACAAAATTGCAAATGGATTGGCCGCAGGATTGCTCTATCTTCACCAAGAATGGGAACAGTGTGTGCTGCACAGGGATATCAAATCCAGCAATGTTATGTTGGACTCGAATTTCAATGCCAAACTTGGAGATTTTGGGTTAGCTCGACTTGTAGACCATGGAAAAATGTCTCAAACTACGATTGTAGCAGGAACAATGGGCTACATGGCTATGGAATATGTTACAACGGGAAAGGCTAGCAAGCAAACAGATGTCTATAGTTTCGGAGTTGTTGCTTTGGAAATAGCTTGTGGCAGAAAACCCATTGATTCGAGGTATGAAGAGAAGCAAATCAATATGGTGAAATGGGTTTGGGAGCTCTATGGAGATGGGAAAATTATCGAAGCAGCTGATCCAAAACTGCGTGGAGAGTTTGATGTGAAACAAATGGAGTGCTTATTGATGGTTGGGTTGTGGTGCGCTCATCCGGATTACAATTTCAGGCCTTTGATACAACAAGCAATTCAAGTGCTTAACTTTGAAGTTCCATTGCCCGTTCTCCCACCAAAGATGCCAATGGCTTTTGGTCTTCCATCACTCTCAACGTCGTCCAATTGTGACACTACTGCAGGTCAAAGTGAGCCATCCATCAATTTTTCACGGTTCACCTCATCTTCTACAACAAACTCCAATCCATCAGCAACATTTCAGTAA

Protein Analysis

660

Amino Acids

73.11

Weight (kDa)

8.14

Isoelectric Point (pI)

31.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 31 - 284 1.5e-50 Legume lectin domain
Lectin_L-type_dom PF18483 50 - 267 2e-06 Legume lectin beta-barrel domain
Pkinase PF00069 336 - 541 6.6e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 336 - 544 5.2e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 887
Acc36I ACCTGC 1 cut(s) 1889
AccB1I GGYRCC 1 cut(s) 1188
AccB7I CCANNNNNTGG 1 cut(s) 576
AccI GTMKAC 2 cut(s) 1215, 1443
AccIII TCCGGA 1 cut(s) 1756
AciI CCGC 4 cut(s) 117, 324, 422, 1314
AclWI GGATC 3 cut(s) 509, 545, 1676
AcoI YGGCCR 2 cut(s) 1033, 1311
AcsI RAATTY 4 cut(s) 428, 705, 811, 1399
AcyI GRCGYC 1 cut(s) 884
AfaI GTAC 4 cut(s) 443, 690, 968, 1292
AfiI CCNNNNNNNGG 4 cut(s) 126, 323, 576, 1342
AgeI ACCGGT 1 cut(s) 215
AhdI GACNNNNNGTC 1 cut(s) 908
AjnI CCWGG 2 cut(s) 125, 372
AjuI GAANNNNNNNTTGG 4 cut(s) 999, 1014, 1031, 1046
Alw21I GWGCWC 3 cut(s) 190, 215, 1650
Alw26I GTCTC 1 cut(s) 1464
AlwI GGATC 3 cut(s) 509, 545, 1676
Ama87I CYCGRG 1 cut(s) 1095
Aor13HI TCCGGA 1 cut(s) 1756
AoxI GGCC 6 cut(s) 375, 400, 496, 1033, 1311, 1772
ApeKI GCWGC 5 cut(s) 390, 1050, 1127, 1357, 1676
ApoI RAATTY 4 cut(s) 428, 705, 811, 1399
AsiGI ACCGGT 1 cut(s) 215
AspLEI GCGC 1 cut(s) 1751
AsuHPI GGTGA 8 cut(s) 148, 169, 245, 338, 706, 1325, 1642, 1927
AsuNHI GCTAGC 1 cut(s) 1526
AvaI CYCGRG 1 cut(s) 1095
BanI GGYRCC 1 cut(s) 1188
BanII GRGCYC 1 cut(s) 1650
BbsI GAAGAC 1 cut(s) 1850
Bbv12I GWGCWC 3 cut(s) 190, 215, 1650
BbvCI CCTCAGC 1 cut(s) 1154
BbvI GCAGC 5 cut(s) 402, 1037, 1139, 1344, 1688
BccI CCATC 7 cut(s) 13, 1652, 1726, 1870, 1921, 1925, 1972
BceAI ACGGC 4 cut(s) 178, 346, 373, 1064
BciT130I CCWGG 2 cut(s) 127, 374
BclI TGATCA 1 cut(s) 696
BcoDI GTCTC 1 cut(s) 1464
BfaI CTAG 7 cut(s) 140, 266, 438, 867, 905, 1169, 1527
BfmI CTRYAG 3 cut(s) 976, 1546, 1896
BfuAI ACCTGC 1 cut(s) 1889
BisI GCNGC 7 cut(s) 391, 422, 1051, 1128, 1314, 1358, 1677
BlsI GCNGC 7 cut(s) 392, 423, 1052, 1129, 1315, 1359, 1678
Bme1390I CCNGG 2 cut(s) 127, 374
BmeRI GACNNNNNGTC 1 cut(s) 908
BmeT110I CYCGRG 1 cut(s) 1095
BmiI GGNNCC 3 cut(s) 166, 361, 1190
BmrFI CCNGG 2 cut(s) 127, 374
BmsI GCATC 5 cut(s) 139, 1062, 1168, 1234, 1830
BmtI GCTAGC 1 cut(s) 1530
BpiI GAAGAC 1 cut(s) 1850
BpmI CTGGAG 6 cut(s) 26, 91, 229, 280, 616, 851
Bpu10I CCTNAGC 1 cut(s) 1154
BsaBI GATNNNNATC 3 cut(s) 525, 542, 1248
BsaHI GRCGYC 1 cut(s) 884
BsaJI CCNNGG 5 cut(s) 570, 771, 939, 1096, 1447
BsaWI WCCGGW 2 cut(s) 215, 1756
BsaXI ACNNNNNCTCC 8 cut(s) 202, 232, 387, 417, 571, 601, 1274, 1304
Bsc4I CCNNNNNNNGG 4 cut(s) 126, 323, 576, 1342
Bse118I RCCGGY 1 cut(s) 215
Bse1I ACTGG 3 cut(s) 43, 212, 297
Bse3DI GCAATG 3 cut(s) 801, 1387, 1817
Bse8I GATNNNNATC 3 cut(s) 525, 542, 1248
BseAI TCCGGA 1 cut(s) 1756
BseBI CCWGG 2 cut(s) 127, 374
BseDI CCNNGG 5 cut(s) 570, 771, 939, 1096, 1447
BseGI GGATG 4 cut(s) 841, 935, 1753, 1913
BseJI GATNNNNATC 3 cut(s) 525, 542, 1248
BseLI CCNNNNNNNGG 4 cut(s) 126, 323, 576, 1342
BseMI GCAATG 3 cut(s) 801, 1387, 1817
BseMII CTCAG 1 cut(s) 1145
BseNI ACTGG 3 cut(s) 43, 212, 297
BseRI GAGGAG 1 cut(s) 236
BseXI GCAGC 5 cut(s) 402, 1037, 1139, 1344, 1688
BseYI CCCAGC 1 cut(s) 1001
BsgI GTGCAG 1 cut(s) 1343
BshFI GGCC 6 cut(s) 377, 402, 498, 1035, 1313, 1774
BshNI GGYRCC 1 cut(s) 1188
BshTI ACCGGT 1 cut(s) 215
BsiHKAI GWGCWC 3 cut(s) 190, 215, 1650
BsiHKCI CYCGRG 1 cut(s) 1095
BsiSI CCGG 3 cut(s) 216, 250, 1757
BslI CCNNNNNNNGG 4 cut(s) 126, 323, 576, 1342
BsmAI GTCTC 1 cut(s) 1464
BsnI GGCC 6 cut(s) 377, 402, 498, 1035, 1313, 1774
BsoBI CYCGRG 1 cut(s) 1095
Bsp1286I GDGCHC 3 cut(s) 190, 215, 1650
Bsp13I TCCGGA 1 cut(s) 1756
Bsp143I GATC 8 cut(s) 514, 526, 537, 673, 696, 721, 798, 1681
Bsp19I CCATGG 1 cut(s) 1447
BspACI CCGC 4 cut(s) 117, 324, 422, 1314
BspANI GGCC 6 cut(s) 377, 402, 498, 1035, 1313, 1774
BspCNI CTCAG 1 cut(s) 1146
BspEI TCCGGA 1 cut(s) 1756
BspLI GGNNCC 3 cut(s) 166, 361, 1190
BspMAI CTGCAG 2 cut(s) 980, 1900
BspMI ACCTGC 1 cut(s) 1889
BspOI GCTAGC 1 cut(s) 1530
BspPI GGATC 3 cut(s) 509, 545, 1676
BspT107I GGYRCC 1 cut(s) 1188
BsrDI GCAATG 3 cut(s) 801, 1387, 1817
BsrFI RCCGGY 1 cut(s) 215
BsrI ACTGG 3 cut(s) 43, 212, 297
BssAI RCCGGY 1 cut(s) 215
BssECI CCNNGG 5 cut(s) 570, 771, 939, 1096, 1447
BssMI GATC 8 cut(s) 514, 526, 537, 673, 696, 721, 798, 1681
BssNI GRCGYC 1 cut(s) 884
BssT1I CCWWGG 2 cut(s) 939, 1447
Bst2UI CCWGG 2 cut(s) 127, 374
Bst4CI ACNGT 2 cut(s) 1350, 1932
Bst6I CTCTTC 3 cut(s) 831, 983, 1605
BstACI GRCGYC 1 cut(s) 884
BstC8I GCNNGC 2 cut(s) 1528, 1532
BstDEI CTNAG 5 cut(s) 379, 647, 898, 1154, 1240
BstDSI CCRYGG 3 cut(s) 570, 771, 1447
BstF5I GGATG 4 cut(s) 841, 935, 1753, 1913
BstHHI GCGC 1 cut(s) 1751
BstKTI GATC 8 cut(s) 517, 529, 540, 676, 699, 724, 801, 1684
BstMAI GTCTC 1 cut(s) 1464
BstMBI GATC 8 cut(s) 514, 526, 537, 673, 696, 721, 798, 1681
BstMWI GCNNNNNNNGC 2 cut(s) 330, 399
BstNI CCWGG 2 cut(s) 127, 374
BstNSI RCATGY 1 cut(s) 1273
BstSCI CCNGG 2 cut(s) 125, 372
BstSFI CTRYAG 3 cut(s) 976, 1546, 1896
BstV1I GCAGC 5 cut(s) 402, 1037, 1139, 1344, 1688
BstV2I GAAGAC 1 cut(s) 1850
BstX2I RGATCY 1 cut(s) 514
BstXI CCANNNNNNTGG 1 cut(s) 829
BstYI RGATCY 1 cut(s) 514
BsuRI GGCC 6 cut(s) 377, 402, 498, 1035, 1313, 1774
BtgI CCRYGG 3 cut(s) 570, 771, 1447
BtsCI GGATG 4 cut(s) 841, 935, 1753, 1913
BtsIMutI CAGTG 2 cut(s) 304, 1355
BveI ACCTGC 1 cut(s) 1889
Cac8I GCNNGC 2 cut(s) 1528, 1532
CfoI GCGC 1 cut(s) 1751
Cfr10I RCCGGY 1 cut(s) 215
CseI GACGC 1 cut(s) 206
Csp6I GTAC 4 cut(s) 442, 689, 967, 1291
CspAI ACCGGT 1 cut(s) 215
CviAII CATG 5 cut(s) 530, 807, 1270, 1448, 1495
CviQI GTAC 4 cut(s) 442, 689, 967, 1291
DdeI CTNAG 5 cut(s) 379, 647, 898, 1154, 1240
DpnI GATC 8 cut(s) 516, 528, 539, 675, 698, 723, 800, 1683
DpnII GATC 8 cut(s) 514, 526, 537, 673, 696, 721, 798, 1681
DriI GACNNNNNGTC 1 cut(s) 908
EaeI YGGCCR 2 cut(s) 1033, 1311
Eam1104I CTCTTC 3 cut(s) 831, 983, 1605
Eam1105I GACNNNNNGTC 1 cut(s) 908
EarI CTCTTC 3 cut(s) 831, 983, 1605
Ecl136II GAGCTC 1 cut(s) 1648
Eco130I CCWWGG 2 cut(s) 939, 1447
Eco147I AGGCCT 2 cut(s) 377, 1774
Eco24I GRGCYC 1 cut(s) 1650
Eco32I GATATC 3 cut(s) 469, 1092, 1369
Eco53kI GAGCTC 1 cut(s) 1648
Eco88I CYCGRG 1 cut(s) 1095
EcoICRI GAGCTC 1 cut(s) 1648
EcoRII CCWGG 2 cut(s) 125, 372
EcoRV GATATC 3 cut(s) 469, 1092, 1369
EcoT14I CCWWGG 2 cut(s) 939, 1447
EcoT38I GRGCYC 1 cut(s) 1650
ErhI CCWWGG 2 cut(s) 939, 1447
FaeI CATG 5 cut(s) 533, 810, 1273, 1451, 1498
FatI CATG 5 cut(s) 529, 806, 1269, 1447, 1494
FauI CCCGC 1 cut(s) 124
FauNDI CATATG 1 cut(s) 1072
FbaI TGATCA 1 cut(s) 696
FblI GTMKAC 2 cut(s) 1215, 1443
Fnu4HI GCNGC 7 cut(s) 391, 422, 1051, 1128, 1314, 1358, 1677
FokI GGATG 4 cut(s) 848, 942, 1740, 1900
FriOI GRGCYC 1 cut(s) 1650
Fsp4HI GCNGC 7 cut(s) 391, 422, 1051, 1128, 1314, 1358, 1677
FspBI CTAG 7 cut(s) 140, 266, 438, 867, 905, 1169, 1527
GlaI GCGC 1 cut(s) 1750
GluI GCNGC 7 cut(s) 391, 422, 1051, 1128, 1314, 1358, 1677
GsaI CCCAGC 1 cut(s) 1005
GsuI CTGGAG 6 cut(s) 26, 91, 229, 280, 616, 851
HaeIII GGCC 6 cut(s) 377, 402, 498, 1035, 1313, 1774
HapII CCGG 3 cut(s) 216, 250, 1757
HgaI GACGC 1 cut(s) 206
HhaI GCGC 1 cut(s) 1751
Hin1I GRCGYC 1 cut(s) 884
Hin1II CATG 5 cut(s) 533, 810, 1273, 1451, 1498
Hin6I GCGC 1 cut(s) 1749
HinP1I GCGC 1 cut(s) 1749
HincII GTYRAC 3 cut(s) 28, 412, 1275
HindII GTYRAC 3 cut(s) 28, 412, 1275
HindIII AAGCTT 2 cut(s) 1013, 1237
HinfI GANTC 8 cut(s) 130, 174, 236, 759, 1067, 1165, 1394, 1598
HpaI GTTAAC 1 cut(s) 1275
HpaII CCGG 3 cut(s) 216, 250, 1757
HphI GGTGA 8 cut(s) 148, 169, 245, 338, 706, 1325, 1642, 1927
Hpy166II GTNNAC 6 cut(s) 28, 412, 1216, 1275, 1444, 1935
Hpy188I TCNGA 4 cut(s) 173, 914, 1164, 1556
Hpy188III TCNNGA 6 cut(s) 140, 191, 518, 830, 1095, 1757
Hpy8I GTNNAC 6 cut(s) 28, 412, 1216, 1275, 1444, 1935
Hpy99I CGWCG 4 cut(s) 164, 883, 886, 1879
HpyAV CCTTC 6 cut(s) 59, 238, 590, 667, 1016, 1111
HpyCH4III ACNGT 2 cut(s) 1350, 1932
HpyCH4IV ACGT 2 cut(s) 884, 1874
HpyF10VI GCNNNNNNNGC 2 cut(s) 330, 399
HpyF3I CTNAG 5 cut(s) 379, 647, 898, 1154, 1240
HpySE526I ACGT 2 cut(s) 884, 1874
Hsp92I GRCGYC 1 cut(s) 884
Hsp92II CATG 5 cut(s) 533, 810, 1273, 1451, 1498
HspAI GCGC 1 cut(s) 1749
Kpn2I TCCGGA 1 cut(s) 1756
Ksp22I TGATCA 1 cut(s) 696
KspAI GTTAAC 1 cut(s) 1275
Kzo9I GATC 8 cut(s) 514, 526, 537, 673, 696, 721, 798, 1681
LmnI GCTCC 5 cut(s) 170, 210, 355, 365, 1645
Lsp1109I GCAGC 5 cut(s) 402, 1037, 1139, 1344, 1688
LweI GCATC 5 cut(s) 139, 1062, 1168, 1234, 1830
MaeI CTAG 7 cut(s) 140, 266, 438, 867, 905, 1169, 1527
MaeII ACGT 2 cut(s) 884, 1874
MaeIII GTNAC 6 cut(s) 299, 326, 677, 934, 1510, 1886
MalI GATC 8 cut(s) 516, 528, 539, 675, 698, 723, 800, 1683
MboI GATC 8 cut(s) 514, 526, 537, 673, 696, 721, 798, 1681
MfeI CAATTG 1 cut(s) 1882
MflI RGATCY 1 cut(s) 514
MhlI GDGCHC 3 cut(s) 190, 215, 1650
MlyI GAGTC 4 cut(s) 124, 168, 1061, 1388
MmeI TCCRAC 5 cut(s) 196, 736, 892, 912, 1371
MroI TCCGGA 1 cut(s) 1756
MseI TTAA 4 cut(s) 71, 1083, 1274, 1803
MslI CAYNNNNRTG 1 cut(s) 1499
MspA1I CMGCKG 2 cut(s) 1001, 1679
MspI CCGG 3 cut(s) 216, 250, 1757
MspR9I CCNGG 2 cut(s) 127, 374
MunI CAATTG 1 cut(s) 1882
MvaI CCWGG 2 cut(s) 127, 374
MwoI GCNNNNNNNGC 2 cut(s) 330, 399
NcoI CCATGG 1 cut(s) 1447
NdeI CATATG 1 cut(s) 1072
NdeII GATC 8 cut(s) 514, 526, 537, 673, 696, 721, 798, 1681
NheI GCTAGC 1 cut(s) 1526
NlaIII CATG 5 cut(s) 533, 810, 1273, 1451, 1498
NlaIV GGNNCC 3 cut(s) 166, 361, 1190
NmeAIII GCCGAG 1 cut(s) 1061
NmuCI GTSAC 3 cut(s) 299, 326, 1886
NspI RCATGY 1 cut(s) 1273
PceI AGGCCT 2 cut(s) 377, 1774
PfeI GAWTC 4 cut(s) 236, 759, 1165, 1598
PflFI GACNNNGTC 1 cut(s) 883
PflMI CCANNNNNTGG 1 cut(s) 576
PinAI ACCGGT 1 cut(s) 215
PkrI GCNGC 7 cut(s) 392, 423, 1052, 1129, 1315, 1359, 1678
PleI GAGTC 4 cut(s) 124, 168, 1061, 1388
PpsI GAGTC 4 cut(s) 124, 168, 1061, 1388
Psp124BI GAGCTC 1 cut(s) 1650
Psp6I CCWGG 2 cut(s) 125, 372
PspFI CCCAGC 1 cut(s) 1001
PspGI CCWGG 2 cut(s) 125, 372
PspN4I GGNNCC 3 cut(s) 166, 361, 1190
PstI CTGCAG 2 cut(s) 980, 1900
PsuI RGATCY 1 cut(s) 514
PsyI GACNNNGTC 1 cut(s) 883
PvuII CAGCTG 2 cut(s) 1001, 1679
RsaI GTAC 4 cut(s) 443, 690, 968, 1292
RsaNI GTAC 4 cut(s) 442, 689, 967, 1291
RseI CAYNNNNRTG 1 cut(s) 1499
SacI GAGCTC 1 cut(s) 1650
SaqAI TTAA 4 cut(s) 71, 1083, 1274, 1803
SatI GCNGC 7 cut(s) 391, 422, 1051, 1128, 1314, 1358, 1677
Sau3AI GATC 8 cut(s) 514, 526, 537, 673, 696, 721, 798, 1681
SchI GAGTC 4 cut(s) 124, 168, 1061, 1388
ScrFI CCNGG 2 cut(s) 127, 374
SduI GDGCHC 3 cut(s) 190, 215, 1650
SfaNI GCATC 5 cut(s) 139, 1062, 1168, 1234, 1830
SfcI CTRYAG 3 cut(s) 976, 1546, 1896
SmiMI CAYNNNNRTG 1 cut(s) 1499
SseBI AGGCCT 2 cut(s) 377, 1774
SsiI CCGC 4 cut(s) 117, 324, 422, 1314
SspI AATATT 1 cut(s) 610
SspMI CTAG 7 cut(s) 140, 266, 438, 867, 905, 1169, 1527
SstI GAGCTC 1 cut(s) 1650
StuI AGGCCT 2 cut(s) 377, 1774
StyD4I CCNGG 2 cut(s) 125, 372
StyI CCWWGG 2 cut(s) 939, 1447
TaaI ACNGT 2 cut(s) 1350, 1932
TaiI ACGT 2 cut(s) 887, 1877
TaqI TCGA 9 cut(s) 369, 459, 510, 540, 845, 1397, 1435, 1601, 1671
TatI WGTACW 1 cut(s) 688
TauI GCSGC 2 cut(s) 424, 1316
TfiI GAWTC 4 cut(s) 236, 759, 1165, 1598
Tru1I TTAA 4 cut(s) 71, 1083, 1274, 1803
Tru9I TTAA 4 cut(s) 71, 1083, 1274, 1803
TscAI CASTG 2 cut(s) 304, 1355
TseFI GTSAC 3 cut(s) 299, 326, 1886
TseI GCWGC 5 cut(s) 390, 1050, 1127, 1357, 1676
Tsp45I GTSAC 3 cut(s) 299, 326, 1886
TspDTI ATGAA 4 cut(s) 17, 273, 277, 1623
TspGWI ACGGA 2 cut(s) 587, 1248
TspRI CASTG 2 cut(s) 304, 1355
Tth111I GACNNNGTC 1 cut(s) 883
Van91I CCANNNNNTGG 1 cut(s) 576
XapI RAATTY 4 cut(s) 428, 705, 811, 1399
XbaI TCTAGA 1 cut(s) 139
XceI RCATGY 1 cut(s) 1273
XmiI GTMKAC 2 cut(s) 1215, 1443
XspI CTAG 7 cut(s) 140, 266, 438, 867, 905, 1169, 1527
ZraI GACGTC 1 cut(s) 885
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.