Rmu_sc0007406.1_g000025

L-type lectin-domain containing receptor kinase IX.1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007406.1
OG0000038
Physical Location & Seq
Forward (+)
79801 .. 81741
1941 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007406.1_g000025.1.cds

Sequence Viewer

Length: 1941 bp
atgcacttgatcatctccatcaatttcctccttattcccctttgccatacactttccttcaatatcagtcacttcgataattctgcaagtaagatactctacgacggtgatgcagcgccttcttccgacggttcgggattcattgaactcaatagagatgaagcttgtcttgttggctgggcgagatatgcagagccgttgcacttgtgggaggggtcgtcacttgctgcagacttcaccactgacttctccttcattgtgcactttcttaacagcagcgaaattggtgatgggctttccttcttcctcgctccggtccactatacaattccacccaactcccgcggtcctttgatgggtttgttcaacgcaaccactcagttggcagtctcccaaaaccagcttgtgacggttgagttcgacactacatccaatcccgtctgggatccaccggtgacgcacatcgggatcaacgacaggagcgtcaggtcagttgttaatgccagctgggatcctctcagtgggaaaccgtgtcatgcacggataacgtacaatgctaccaccaacaacctcactgtgttttggacatacgaagaaaatttcgaggcaaattcttccctttcctatcctattgacctgaaaatgtctctcccggagtgggttagaattggatttgcatcttctacaggccttttccatgagcggcatgttataagatcatgggaattcagtagttcagaaataaagtccgatgcgagccgaaggaggatagtcttgaggattggggtcgctgtagcagcagtagttcttttcttgattttagtgctttatgtatcctaccggtgggtcgtagggaagcggataaagaggacccgtggagaaggaattgagtcgaatgactcctccaggtttgcattgtctcccataaattcagatcttcagataatagccttgccaagacaatttacttatcaagaactagttgcagccaccaatggcttcgcaaacgacagaaggctaggccaaggaggatccggacaagtttataaagggatcatacaagatctaggctgtgcagttgctgtgaagagaatctttgcacaatccgacaagtatgagaaaatcttcatcaacgaagtcaagatcataagccgaataatacataaaaacttggtgcagtttattggatggtgccatgagcaaggcgaatgcttacttgtatatgcatacatgtctaacagtagccttgacacacatctatttggctccagggcaaccttgaagtggggctttcggtataagatagctttaggcttggcctcggcgcttcattatctacacgaggaagcagagcagtgtgtccttcatagggatatcaaatcagctaacgttctgttggacaacgattttagcactaaacttggtgattttgggattgctaagcttgtggattcgcggttaaggtctcagactacaggggtagtcgggacttttgggtacatagctccagaatacgctagtgaaggtagggcaagcaaagaatcagatatttttagcttcggagttgtggccttggaaattgcttgtggaaggacgacttaccacgacggagaattccacttgtcgctttataggtgggtttggcatttgtaccttgcaggaaacttactagatgcagctgatgagagattgggtgtagattttgatcaaaatgaaatggagtgcttgttaattgttggattatggtgcactcatcccaactgcaaagaaaggccaaaagcaggacaagtgattaaggttctccagcttgaagcaccattgccaaatcttccacatagcatgcctgattacccaatgcctcaacctcagcaacaagatcaatccggttcctctcagccacagtcgtcactaacttctagcttcaacactgtaggtcgttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase

Protein Analysis

646

Amino Acids

72.08

Weight (kDa)

6.03

Isoelectric Point (pI)

49.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 713, 1047
AasI GACNNNNNNGTC 1 cut(s) 482
AccB1I GGYRCC 1 cut(s) 1191
AccBSI CCGCTC 1 cut(s) 703
AccII CGCG 2 cut(s) 345, 1456
AccIII TCCGGA 1 cut(s) 1034
AciI CCGC 5 cut(s) 343, 345, 703, 859, 1456
AclI AACGTT 1 cut(s) 1389
AclWI GGATC 8 cut(s) 440, 453, 476, 506, 519, 1026, 1039, 1061
AcsI RAATTY 5 cut(s) 598, 610, 725, 928, 1613
AcuI CTGAAG 1 cut(s) 923
AfaI GTAC 3 cut(s) 551, 1499, 1652
AfiI CCNNNNNNNGG 8 cut(s) 313, 356, 521, 658, 843, 1284, 1369, 1781
AflIII ACRYGT 1 cut(s) 1230
AgeI ACCGGT 2 cut(s) 451, 840
AgsI TTSAA 6 cut(s) 61, 146, 367, 1282, 1811, 1924
AhlI ACTAGT 1 cut(s) 979
AjnI CCWGG 2 cut(s) 905, 1268
Alw21I GWGCWC 2 cut(s) 264, 1751
Alw26I GTCTC 4 cut(s) 394, 651, 924, 1470
Alw44I GTGCAC 2 cut(s) 260, 1747
AlwI GGATC 8 cut(s) 440, 453, 476, 506, 519, 1026, 1039, 1061
AlwNI CAGNNNCTG 1 cut(s) 1082
Aor13HI TCCGGA 1 cut(s) 1034
AoxI GGCC 5 cut(s) 688, 1021, 1317, 1569, 1772
ApaLI GTGCAC 2 cut(s) 260, 1747
ApeKI GCWGC 6 cut(s) 113, 227, 276, 797, 986, 1676
ApoI RAATTY 5 cut(s) 598, 610, 725, 928, 1613
AsiGI ACCGGT 2 cut(s) 451, 840
Asp700I GAANNNNTTC 1 cut(s) 1124
AspLEI GCGC 2 cut(s) 118, 1327
AspS9I GGNCC 3 cut(s) 316, 347, 870
AsuC2I CCSGG 1 cut(s) 653
AsuHPI GGTGA 5 cut(s) 119, 229, 299, 466, 1436
AvaII GGWCC 3 cut(s) 316, 347, 870
BaeGI GKGCMC 2 cut(s) 264, 1751
BamHI GGATCC 3 cut(s) 445, 511, 1031
BanI GGYRCC 1 cut(s) 1191
BauI CACGAG 1 cut(s) 1340
Bbv12I GWGCWC 2 cut(s) 264, 1751
BbvCI CCTCAGC 1 cut(s) 1866
BbvI GCAGC 6 cut(s) 125, 214, 288, 809, 998, 1688
BccI CCATC 4 cut(s) 26, 284, 349, 1182
BceAI ACGGC 1 cut(s) 181
BcgI CGANNNNNNTGC 4 cut(s) 65, 92, 99, 126
BciT130I CCWGG 2 cut(s) 907, 1270
BciVI GTATCC 1 cut(s) 844
BclI TGATCA 2 cut(s) 9, 1705
BcnI CCSGG 1 cut(s) 653
BcoDI GTCTC 4 cut(s) 394, 651, 924, 1470
BcuI ACTAGT 1 cut(s) 979
BfaI CTAG 6 cut(s) 980, 1019, 1067, 1518, 1670, 1917
BfmI CTRYAG 5 cut(s) 228, 684, 792, 1473, 1929
BfoI RGCGCY 2 cut(s) 119, 1328
BfuI GTATCC 1 cut(s) 844
BglII AGATCT 2 cut(s) 934, 1063
BisI GCNGC 7 cut(s) 114, 228, 277, 704, 798, 987, 1677
BlpI GCTNAGC 1 cut(s) 1440
BlsI GCNGC 7 cut(s) 115, 229, 278, 705, 799, 988, 1678
Bme1390I CCNGG 3 cut(s) 653, 907, 1270
Bme18I GGWCC 3 cut(s) 316, 347, 870
BmgT120I GGNCC 3 cut(s) 316, 347, 870
BmiI GGNNCC 7 cut(s) 447, 513, 872, 1033, 1193, 1267, 1888
BmrFI CCNGG 3 cut(s) 653, 907, 1270
BmsI GCATC 4 cut(s) 100, 686, 742, 1663
BpmI CTGGAG 4 cut(s) 889, 1252, 1491, 1787
Bpu10I CCTNAGC 1 cut(s) 1866
Bpu1102I GCTNAGC 1 cut(s) 1440
BpuEI CTTGAG 1 cut(s) 796
BpuMI CCSGG 1 cut(s) 653
BsaBI GATNNNNATC 2 cut(s) 676, 1704
BsaI GGTCTC 1 cut(s) 1470
BsaJI CCNNGG 6 cut(s) 343, 874, 1024, 1269, 1320, 1572
BsaWI WCCGGW 5 cut(s) 313, 451, 840, 1034, 1883
BsaXI ACNNNNNCTCC 4 cut(s) 203, 233, 1712, 1742
Bsc4I CCNNNNNNNGG 8 cut(s) 313, 356, 521, 658, 843, 1284, 1369, 1781
Bse118I RCCGGY 2 cut(s) 451, 840
Bse3DI GCAATG 1 cut(s) 1817
Bse8I GATNNNNATC 2 cut(s) 676, 1704
BseAI TCCGGA 1 cut(s) 1034
BseBI CCWGG 2 cut(s) 907, 1270
BseDI CCNNGG 6 cut(s) 343, 874, 1024, 1269, 1320, 1572
BseGI GGATG 3 cut(s) 428, 1193, 1753
BseJI GATNNNNATC 2 cut(s) 676, 1704
BseLI CCNNNNNNNGG 8 cut(s) 313, 356, 521, 658, 843, 1284, 1369, 1781
BseMI GCAATG 1 cut(s) 1817
BseMII CTCAG 5 cut(s) 392, 532, 1481, 1880, 1907
BseRI GAGGAG 1 cut(s) 892
BseSI GKGCMC 2 cut(s) 264, 1751
BseXI GCAGC 6 cut(s) 125, 214, 288, 809, 998, 1688
BseYI CCCAGC 2 cut(s) 177, 507
BsgI GTGCAG 2 cut(s) 1095, 1196
Bsh1236I CGCG 2 cut(s) 345, 1456
BshFI GGCC 5 cut(s) 690, 1023, 1319, 1571, 1774
BshNI GGYRCC 1 cut(s) 1191
BshTI ACCGGT 2 cut(s) 451, 840
BsiHKAI GWGCWC 2 cut(s) 264, 1751
BsiSI CCGG 6 cut(s) 314, 452, 653, 841, 1035, 1884
BslFI GGGAC 1 cut(s) 1501
BslI CCNNNNNNNGG 8 cut(s) 313, 356, 521, 658, 843, 1284, 1369, 1781
BsmAI GTCTC 4 cut(s) 394, 651, 924, 1470
BsmFI GGGAC 1 cut(s) 1501
BsmI GAATGC 1 cut(s) 1214
BsnI GGCC 5 cut(s) 690, 1023, 1319, 1571, 1774
Bso31I GGTCTC 1 cut(s) 1470
Bsp1286I GDGCHC 2 cut(s) 264, 1751
Bsp13I TCCGGA 1 cut(s) 1034
Bsp1720I GCTNAGC 1 cut(s) 1440
BspACI CCGC 5 cut(s) 343, 345, 703, 859, 1456
BspANI GGCC 5 cut(s) 690, 1023, 1319, 1571, 1774
BspCNI CTCAG 5 cut(s) 391, 531, 1480, 1879, 1906
BspEI TCCGGA 1 cut(s) 1034
BspFNI CGCG 2 cut(s) 345, 1456
BspLI GGNNCC 7 cut(s) 447, 513, 872, 1033, 1193, 1267, 1888
BspMAI CTGCAG 1 cut(s) 232
BspPI GGATC 8 cut(s) 440, 453, 476, 506, 519, 1026, 1039, 1061
BspT107I GGYRCC 1 cut(s) 1191
BspTNI GGTCTC 1 cut(s) 1470
BsrBI CCGCTC 1 cut(s) 703
BsrDI GCAATG 1 cut(s) 1817
BsrFI RCCGGY 2 cut(s) 451, 840
BssAI RCCGGY 2 cut(s) 451, 840
BssECI CCNNGG 6 cut(s) 343, 874, 1024, 1269, 1320, 1572
BssSI CACGAG 1 cut(s) 1340
BssT1I CCWWGG 2 cut(s) 1024, 1572
Bst2BI CACGAG 1 cut(s) 1340
Bst2UI CCWGG 2 cut(s) 907, 1270
Bst4CI ACNGT 8 cut(s) 107, 131, 412, 531, 577, 1241, 1902, 1930
Bst6I CTCTTC 1 cut(s) 1082
BstC8I GCNNGC 4 cut(s) 505, 757, 1534, 1841
BstDEI CTNAG 6 cut(s) 378, 518, 1440, 1467, 1866, 1893
BstDSI CCRYGG 2 cut(s) 343, 874
BstF5I GGATG 3 cut(s) 428, 1193, 1753
BstFNI CGCG 2 cut(s) 345, 1456
BstH2I RGCGCY 2 cut(s) 119, 1328
BstHHI GCGC 2 cut(s) 118, 1327
BstMAI GTCTC 4 cut(s) 394, 651, 924, 1470
BstMWI GCNNNNNNNGC 2 cut(s) 188, 797
BstNI CCWGG 2 cut(s) 907, 1270
BstNSI RCATGY 3 cut(s) 710, 1234, 1843
BstSCI CCNGG 3 cut(s) 651, 905, 1268
BstSFI CTRYAG 5 cut(s) 228, 684, 792, 1473, 1929
BstSLI GKGCMC 2 cut(s) 264, 1751
BstUI CGCG 2 cut(s) 345, 1456
BstV1I GCAGC 6 cut(s) 125, 214, 288, 809, 998, 1688
BstX2I RGATCY 5 cut(s) 445, 511, 934, 1031, 1063
BstXI CCANNNNNNTGG 1 cut(s) 382
BstYI RGATCY 5 cut(s) 445, 511, 934, 1031, 1063
BsuI GTATCC 1 cut(s) 844
BsuRI GGCC 5 cut(s) 690, 1023, 1319, 1571, 1774
BtgI CCRYGG 2 cut(s) 343, 874
BtsCI GGATG 3 cut(s) 428, 1193, 1753
BtsI GCAGTG 1 cut(s) 1361
BtsIMutI CAGTG 5 cut(s) 240, 526, 573, 1361, 1926
Cac8I GCNNGC 4 cut(s) 505, 757, 1534, 1841
CaiI CAGNNNCTG 1 cut(s) 1082
CfoI GCGC 2 cut(s) 118, 1327
Cfr10I RCCGGY 2 cut(s) 451, 840
Cfr13I GGNCC 3 cut(s) 316, 347, 870
Cfr42I CCGCGG 1 cut(s) 346
CseI GACGC 2 cut(s) 466, 472
Csp6I GTAC 3 cut(s) 550, 1498, 1651
CspAI ACCGGT 2 cut(s) 451, 840
CviAII CATG 7 cut(s) 536, 698, 707, 720, 1196, 1231, 1840
CviQI GTAC 3 cut(s) 550, 1498, 1651
DdeI CTNAG 6 cut(s) 378, 518, 1440, 1467, 1866, 1893
DrdI GACNNNNNNGTC 1 cut(s) 482
DseDI GACNNNNNNGTC 1 cut(s) 482
Eam1104I CTCTTC 1 cut(s) 1082
EarI CTCTTC 1 cut(s) 1082
Eco130I CCWWGG 2 cut(s) 1024, 1572
Eco147I AGGCCT 1 cut(s) 690
Eco31I GGTCTC 1 cut(s) 1470
Eco32I GATATC 1 cut(s) 1375
Eco47I GGWCC 3 cut(s) 316, 347, 870
Eco57I CTGAAG 1 cut(s) 923
EcoO109I RGGNCCY 1 cut(s) 870
EcoRI GAATTC 2 cut(s) 725, 1613
EcoRII CCWGG 2 cut(s) 905, 1268
EcoRV GATATC 1 cut(s) 1375
EcoT14I CCWWGG 2 cut(s) 1024, 1572
EcoT22I ATGCAT 1 cut(s) 1228
ErhI CCWWGG 2 cut(s) 1024, 1572
FaeI CATG 7 cut(s) 539, 701, 710, 723, 1199, 1234, 1843
FalI AAGNNNNNCTT 8 cut(s) 153, 185, 1079, 1111, 1274, 1306, 1582, 1614
FaqI GGGAC 1 cut(s) 1501
FatI CATG 7 cut(s) 535, 697, 706, 719, 1195, 1230, 1839
FauI CCCGC 1 cut(s) 350
FbaI TGATCA 2 cut(s) 9, 1705
Fnu4HI GCNGC 7 cut(s) 114, 228, 277, 704, 798, 987, 1677
FokI GGATG 3 cut(s) 415, 1200, 1740
Fsp4HI GCNGC 7 cut(s) 114, 228, 277, 704, 798, 987, 1677
FspBI CTAG 6 cut(s) 980, 1019, 1067, 1518, 1670, 1917
GlaI GCGC 2 cut(s) 117, 1326
GluI GCNGC 7 cut(s) 114, 228, 277, 704, 798, 987, 1677
GsaI CCCAGC 2 cut(s) 181, 511
GsuI CTGGAG 4 cut(s) 889, 1252, 1491, 1787
HaeII RGCGCY 2 cut(s) 119, 1328
HaeIII GGCC 5 cut(s) 690, 1023, 1319, 1571, 1774
HapII CCGG 6 cut(s) 314, 452, 653, 841, 1035, 1884
HgaI GACGC 2 cut(s) 466, 472
HhaI GCGC 2 cut(s) 118, 1327
Hin1II CATG 7 cut(s) 539, 701, 710, 723, 1199, 1234, 1843
Hin6I GCGC 2 cut(s) 116, 1325
HinP1I GCGC 2 cut(s) 116, 1325
HindIII AAGCTT 2 cut(s) 162, 1442
HinfI GANTC 6 cut(s) 138, 890, 899, 1092, 1451, 1541
HpaII CCGG 6 cut(s) 314, 452, 653, 841, 1035, 1884
HphI GGTGA 5 cut(s) 119, 229, 299, 466, 1436
Hpy166II GTNNAC 3 cut(s) 262, 319, 1749
Hpy188I TCNGA 9 cut(s) 127, 739, 751, 934, 942, 1108, 1470, 1546, 1562
Hpy188III TCNNGA 9 cut(s) 135, 466, 775, 814, 974, 1035, 1141, 1486, 1508
Hpy8I GTNNAC 3 cut(s) 262, 319, 1749
Hpy99I CGWCG 3 cut(s) 107, 131, 1610
HpyCH4III ACNGT 8 cut(s) 107, 131, 412, 531, 577, 1241, 1902, 1930
HpyCH4IV ACGT 2 cut(s) 548, 1389
HpyF10VI GCNNNNNNNGC 2 cut(s) 188, 797
HpyF3I CTNAG 6 cut(s) 378, 518, 1440, 1467, 1866, 1893
HpySE526I ACGT 2 cut(s) 548, 1389
Hsp92II CATG 7 cut(s) 539, 701, 710, 723, 1199, 1234, 1843
HspAI GCGC 2 cut(s) 116, 1325
Kpn2I TCCGGA 1 cut(s) 1034
Ksp22I TGATCA 2 cut(s) 9, 1705
KspI CCGCGG 1 cut(s) 346
LmnI GCTCC 4 cut(s) 316, 480, 1271, 1510
Lsp1109I GCAGC 6 cut(s) 125, 214, 288, 809, 998, 1688
LweI GCATC 4 cut(s) 100, 686, 742, 1663
MaeI CTAG 6 cut(s) 980, 1019, 1067, 1518, 1670, 1917
MaeII ACGT 2 cut(s) 548, 1389
MaeIII GTNAC 5 cut(s) 68, 219, 406, 454, 1905
MbiI CCGCTC 1 cut(s) 703
MboII GAAGA 9 cut(s) 114, 295, 605, 606, 672, 929, 1099, 1117, 1820
MflI RGATCY 5 cut(s) 445, 511, 934, 1031, 1063
MhlI GDGCHC 2 cut(s) 264, 1751
MlyI GAGTC 2 cut(s) 893, 899
MmeI TCCRAC 4 cut(s) 150, 1131, 1377, 1717
Mph1103I ATGCAT 1 cut(s) 1228
MroI TCCGGA 1 cut(s) 1034
MroXI GAANNNNTTC 1 cut(s) 1124
MseI TTAA 6 cut(s) 270, 498, 1460, 1730, 1794, 1939
MspA1I CMGCKG 3 cut(s) 345, 507, 1679
MspI CCGG 6 cut(s) 314, 452, 653, 841, 1035, 1884
MspR9I CCNGG 3 cut(s) 653, 907, 1270
Mva1269I GAATGC 1 cut(s) 1214
MvaI CCWGG 2 cut(s) 907, 1270
MvnI CGCG 2 cut(s) 345, 1456
MwoI GCNNNNNNNGC 2 cut(s) 188, 797
NciI CCSGG 1 cut(s) 653
NlaIII CATG 7 cut(s) 539, 701, 710, 723, 1199, 1234, 1843
NlaIV GGNNCC 7 cut(s) 447, 513, 872, 1033, 1193, 1267, 1888
NmeAIII GCCGAG 1 cut(s) 1301
NmuCI GTSAC 5 cut(s) 68, 219, 406, 454, 1905
NsiI ATGCAT 1 cut(s) 1228
NspI RCATGY 3 cut(s) 710, 1234, 1843
PaeI GCATGC 1 cut(s) 1843
PceI AGGCCT 1 cut(s) 690
PciI ACATGT 1 cut(s) 1230
PcsI WCGNNNNNNNCGW 2 cut(s) 471, 480
PctI GAATGC 1 cut(s) 1214
PdmI GAANNNNTTC 1 cut(s) 1124
PfeI GAWTC 4 cut(s) 138, 1092, 1451, 1541
PfoI TCCNGGA 1 cut(s) 651
PinAI ACCGGT 2 cut(s) 451, 840
PkrI GCNGC 7 cut(s) 115, 229, 278, 705, 799, 988, 1678
PleI GAGTC 2 cut(s) 893, 898
PpsI GAGTC 2 cut(s) 893, 898
PpuMI RGGWCCY 1 cut(s) 870
PscI ACATGT 1 cut(s) 1230
PsiI TTATAA 2 cut(s) 713, 1047
Psp1406I AACGTT 1 cut(s) 1389
Psp5II RGGWCCY 1 cut(s) 870
Psp6I CCWGG 2 cut(s) 905, 1268
PspFI CCCAGC 2 cut(s) 177, 507
PspGI CCWGG 2 cut(s) 905, 1268
PspN4I GGNNCC 7 cut(s) 447, 513, 872, 1033, 1193, 1267, 1888
PspPI GGNCC 3 cut(s) 316, 347, 870
PspPPI RGGWCCY 1 cut(s) 870
PstI CTGCAG 1 cut(s) 232
PstNI CAGNNNCTG 1 cut(s) 1082
PsuI RGATCY 5 cut(s) 445, 511, 934, 1031, 1063
PvuII CAGCTG 2 cut(s) 507, 1679
RsaI GTAC 3 cut(s) 551, 1499, 1652
RsaNI GTAC 3 cut(s) 550, 1498, 1651
SacII CCGCGG 1 cut(s) 346
SaqAI TTAA 6 cut(s) 270, 498, 1460, 1730, 1794, 1939
SatI GCNGC 7 cut(s) 114, 228, 277, 704, 798, 987, 1677
Sau96I GGNCC 3 cut(s) 316, 347, 870
SchI GAGTC 2 cut(s) 893, 899
ScrFI CCNGG 3 cut(s) 653, 907, 1270
SduI GDGCHC 2 cut(s) 264, 1751
SfaNI GCATC 4 cut(s) 100, 686, 742, 1663
SfcI CTRYAG 5 cut(s) 228, 684, 792, 1473, 1929
Sfr303I CCGCGG 1 cut(s) 346
SgrAI CRCCGGYG 1 cut(s) 451
SgrBI CCGCGG 1 cut(s) 346
SinI GGWCC 3 cut(s) 316, 347, 870
SmlI CTYRAG 1 cut(s) 775
SmoI CTYRAG 1 cut(s) 775
SpeI ACTAGT 1 cut(s) 979
SphI GCATGC 1 cut(s) 1843
SseBI AGGCCT 1 cut(s) 690
SsiI CCGC 5 cut(s) 343, 345, 703, 859, 1456
SspMI CTAG 6 cut(s) 980, 1019, 1067, 1518, 1670, 1917
StuI AGGCCT 1 cut(s) 690
StyD4I CCNGG 3 cut(s) 651, 905, 1268
StyI CCWWGG 2 cut(s) 1024, 1572
TaaI ACNGT 8 cut(s) 107, 131, 412, 531, 577, 1241, 1902, 1930
TaiI ACGT 2 cut(s) 551, 1392
TaqI TCGA 4 cut(s) 75, 420, 603, 893
TauI GCSGC 1 cut(s) 706
TfiI GAWTC 4 cut(s) 138, 1092, 1451, 1541
Tru1I TTAA 6 cut(s) 270, 498, 1460, 1730, 1794, 1939
Tru9I TTAA 6 cut(s) 270, 498, 1460, 1730, 1794, 1939
TscAI CASTG 5 cut(s) 247, 526, 580, 1361, 1933
TseFI GTSAC 5 cut(s) 68, 219, 406, 454, 1905
TseI GCWGC 6 cut(s) 113, 227, 276, 797, 986, 1676
Tsp45I GTSAC 5 cut(s) 68, 219, 406, 454, 1905
TspDTI ATGAA 7 cut(s) 130, 174, 244, 1117, 1319, 1355, 1728
TspGWI ACGGA 2 cut(s) 556, 1623
TspRI CASTG 5 cut(s) 247, 526, 580, 1361, 1933
VneI GTGCAC 2 cut(s) 260, 1747
VpaK11BI GGWCC 3 cut(s) 316, 347, 870
XapI RAATTY 5 cut(s) 598, 610, 725, 928, 1613
XceI RCATGY 3 cut(s) 710, 1234, 1843
XmnI GAANNNNTTC 1 cut(s) 1124
XspI CTAG 6 cut(s) 980, 1019, 1067, 1518, 1670, 1917
Zsp2I ATGCAT 1 cut(s) 1228
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.