Rh6BG142900

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Forward (+)
22859498 .. 22887130
27633 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG142900.1

Sequence Viewer

Length: 1116 bp
ATGCAAGCAATCTGCTTGTGCAATATTTGCTTCCTAATTATTTTCATCAATTTCGTCTCTCTTTTTGCTCATCCACTCTGCTTCAGTATAAATCAGTTCGACCCTAGTACAGATGGAGTACTTATCTATGAAGGTGATGCTCGGTCTTCATCGGGAGTGCTTGAGATCAACACAGGCTCTTATTTCGGTGTCGGACATGCTACGTATGCAGAGCCTTTGCACCTATGGGACACTGCTACTGGGATACTGGCAGACTTCACTACTCATTTCACTTTCGTGCTCGACTTTGGTTATTATCCTAAGGAGTACTTAACCGATGGATTTGCCTTTTTCCTTGCTCCGGTTGGCTACCATATACCACCCAACTCTGCCGGTGGTACACTGGGATTATTCAACTCCACCACCGAAAATGTCTTATCCAAAAACCAGATTGTAGCCGTAGAGTTCGACACTTGGGCAAACGAATGGGATCCAGCCGGGCCGCATATTGGGATCAACATCAATGAAATGTCTTCAGTTATTTACGCAAATTGGAATGCCAGTAACAGCACTGGAAAGCTTGGTAACGCATGGATAACTTACAACGCTTCTGCCCACAACCTTACTGTGTTTTGGACATTCAAGGAGCACACAAACACCGTTTTTCCAGGCAATACTTCTTCTTCTCTTACTTACCACGTTGACTTGCGAAAGGTTCTTCCCGAAAGGGTTACGATCGGTTTTTCTGCTGCGACTGGATTATACCCTGCTCGGCATCTCATAAGATCATGGGGGTTTAATTCGACTTTGGTGGATATAAGAAGCAAGGGAAAGAAGAAAAAGATATTGTTGATTATAAGGAACATTGCAGTTCCTGGCTTCATTTTGACGCTTGGTGTAGTCATATGTTGGTTGGTGGTATTAAGGAAGCCGAGAAACAATTACTCCCGCGAAGTCTCTGATCTTGAGTGGCTAGCCTTTCCAAAACGATTTGCTTACCAAGAATTATTTGATGCCACCAACGGGTTTGCAAACGATAGAAGGCTAGGCCAGGGAGGGTCGGGACAAGATGCAGAGCTTGATGCAGCCTTTGACGGTTCTCGCTATTGGCTTGATGAGGATGATGGAGCTCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

371

Amino Acids

41.25

Weight (kDa)

5.67

Isoelectric Point (pI)

32.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 28 - 268 5.8e-66 Legume lectin domain
Lectin_L-type_dom PF18483 50 - 252 1.6e-06 Legume lectin beta-barrel domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 836
AccII CGCG 1 cut(s) 930
AciI CCGC 2 cut(s) 482, 928
AclWI GGATC 3 cut(s) 464, 477, 500
AcuI CTGAAG 2 cut(s) 67, 498
AfaI GTAC 4 cut(s) 109, 120, 308, 379
AfiI CCNNNNNNNGG 3 cut(s) 340, 488, 1002
AgsI TTSAA 2 cut(s) 394, 622
AjnI CCWGG 3 cut(s) 646, 853, 1029
AleI CACNNNNGTG 1 cut(s) 275
AluBI AGCT 3 cut(s) 559, 1057, 1109
AluI AGCT 3 cut(s) 559, 1057, 1109
Alw21I GWGCWC 3 cut(s) 282, 630, 1111
Alw26I GTCTC 2 cut(s) 61, 940
AlwI GGATC 3 cut(s) 464, 477, 500
AlwNI CAGNNNCTG 1 cut(s) 854
AoxI GGCC 2 cut(s) 479, 1027
ApeKI GCWGC 2 cut(s) 728, 1064
AspS9I GGNCC 1 cut(s) 479
AsuC2I CCSGG 1 cut(s) 478
AsuHPI GGTGA 1 cut(s) 146
AsuNHI GCTAGC 1 cut(s) 952
AxyI CCTNAGG 1 cut(s) 300
BamHI GGATCC 1 cut(s) 469
BanII GRGCYC 1 cut(s) 1111
BbsI GAAGAC 2 cut(s) 138, 504
Bbv12I GWGCWC 3 cut(s) 282, 630, 1111
BbvI GCAGC 2 cut(s) 715, 1076
BccI CCATC 3 cut(s) 107, 311, 1097
BceAI ACGGC 1 cut(s) 422
BcgI CGANNNNNNTGC 2 cut(s) 305, 339
BciT130I CCWGG 3 cut(s) 648, 855, 1031
BciVI GTATCC 1 cut(s) 237
BcnI CCSGG 1 cut(s) 478
BcoDI GTCTC 2 cut(s) 61, 940
BfaI CTAG 3 cut(s) 105, 953, 1025
BfuI GTATCC 1 cut(s) 237
BisI GCNGC 3 cut(s) 482, 729, 1065
BlsI GCNGC 3 cut(s) 483, 730, 1066
BmcAI AGTACT 2 cut(s) 120, 308
Bme1390I CCNGG 4 cut(s) 478, 648, 855, 1031
BmgT120I GGNCC 1 cut(s) 479
BmiI GGNNCC 1 cut(s) 471
BmrFI CCNGG 4 cut(s) 478, 648, 855, 1031
BmrI ACTGGG 2 cut(s) 249, 392
BmsI GCATC 5 cut(s) 127, 763, 982, 1039, 1051
BmtI GCTAGC 1 cut(s) 956
BmuI ACTGGG 2 cut(s) 249, 392
BpiI GAAGAC 2 cut(s) 138, 504
BpuEI CTTGAG 2 cut(s) 182, 965
BpuMI CCSGG 1 cut(s) 478
BsaAI YACGTR 1 cut(s) 204
BsaBI GATNNNNATC 1 cut(s) 497
BsaJI CCNNGG 1 cut(s) 1030
BsaWI WCCGGW 1 cut(s) 340
BsaXI ACNNNNNCTCC 2 cut(s) 908, 938
Bsc4I CCNNNNNNNGG 3 cut(s) 340, 488, 1002
Bse118I RCCGGY 1 cut(s) 371
Bse1I ACTGG 6 cut(s) 244, 252, 387, 540, 556, 739
Bse21I CCTNAGG 1 cut(s) 300
Bse3DI GCAATG 1 cut(s) 843
Bse8I GATNNNNATC 1 cut(s) 497
BseBI CCWGG 3 cut(s) 648, 855, 1031
BseDI CCNNGG 1 cut(s) 1030
BseGI GGATG 2 cut(s) 70, 1105
BseJI GATNNNNATC 1 cut(s) 497
BseLI CCNNNNNNNGG 3 cut(s) 340, 488, 1002
BseMI GCAATG 1 cut(s) 843
BseNI ACTGG 6 cut(s) 244, 252, 387, 540, 556, 739
BseXI GCAGC 2 cut(s) 715, 1076
Bsh1236I CGCG 1 cut(s) 930
Bsh1285I CGRYCG 1 cut(s) 717
BshFI GGCC 2 cut(s) 481, 1029
BsiEI CGRYCG 1 cut(s) 717
BsiHKAI GWGCWC 3 cut(s) 282, 630, 1111
BsiSI CCGG 3 cut(s) 341, 372, 477
BslFI GGGAC 2 cut(s) 242, 1056
BslI CCNNNNNNNGG 3 cut(s) 340, 488, 1002
BsmAI GTCTC 2 cut(s) 61, 940
BsmBI CGTCTC 1 cut(s) 61
BsmFI GGGAC 2 cut(s) 242, 1056
BsmI GAATGC 1 cut(s) 541
BsnI GGCC 2 cut(s) 481, 1029
Bsp1286I GDGCHC 3 cut(s) 282, 630, 1111
Bsp143I GATC 6 cut(s) 165, 469, 492, 714, 764, 940
BspACI CCGC 2 cut(s) 482, 928
BspANI GGCC 2 cut(s) 481, 1029
BspFNI CGCG 1 cut(s) 930
BspLI GGNNCC 1 cut(s) 471
BspOI GCTAGC 1 cut(s) 956
BspPI GGATC 3 cut(s) 464, 477, 500
BsrDI GCAATG 1 cut(s) 843
BsrFI RCCGGY 1 cut(s) 371
BsrI ACTGG 6 cut(s) 244, 252, 387, 540, 556, 739
BssAI RCCGGY 1 cut(s) 371
BssECI CCNNGG 1 cut(s) 1030
BssMI GATC 6 cut(s) 165, 469, 492, 714, 764, 940
Bst2UI CCWGG 3 cut(s) 648, 855, 1031
Bst4CI ACNGT 3 cut(s) 607, 640, 1076
BstAPI GCANNNNNTGC 1 cut(s) 27
BstBAI YACGTR 1 cut(s) 204
BstC8I GCNNGC 2 cut(s) 6, 954
BstDEI CTNAG 1 cut(s) 300
BstF5I GGATG 2 cut(s) 70, 1105
BstFNI CGCG 1 cut(s) 930
BstKTI GATC 6 cut(s) 168, 472, 495, 717, 767, 943
BstMAI GTCTC 2 cut(s) 61, 940
BstMBI GATC 6 cut(s) 165, 469, 492, 714, 764, 940
BstMCI CGRYCG 1 cut(s) 717
BstMWI GCNNNNNNNGC 2 cut(s) 27, 206
BstNI CCWGG 3 cut(s) 648, 855, 1031
BstNSI RCATGY 1 cut(s) 200
BstSCI CCNGG 4 cut(s) 476, 646, 853, 1029
BstSNI TACGTA 1 cut(s) 204
BstUI CGCG 1 cut(s) 930
BstV1I GCAGC 2 cut(s) 715, 1076
BstV2I GAAGAC 2 cut(s) 138, 504
BstX2I RGATCY 1 cut(s) 469
BstYI RGATCY 1 cut(s) 469
Bsu36I CCTNAGG 1 cut(s) 300
BsuI GTATCC 1 cut(s) 237
BsuRI GGCC 2 cut(s) 481, 1029
BtsCI GGATG 2 cut(s) 70, 1105
BtsI GCAGTG 1 cut(s) 231
BtsIMutI CAGTG 3 cut(s) 231, 380, 549
Cac8I GCNNGC 2 cut(s) 6, 954
CaiI CAGNNNCTG 1 cut(s) 854
Cfr10I RCCGGY 1 cut(s) 371
Cfr13I GGNCC 1 cut(s) 479
CseI GACGC 1 cut(s) 877
Csp6I GTAC 4 cut(s) 108, 119, 307, 378
CviAII CATG 3 cut(s) 197, 570, 768
CviQI GTAC 4 cut(s) 108, 119, 307, 378
DdeI CTNAG 1 cut(s) 300
DpnI GATC 6 cut(s) 167, 471, 494, 716, 766, 942
DpnII GATC 6 cut(s) 165, 469, 492, 714, 764, 940
Ecl136II GAGCTC 1 cut(s) 1109
Eco105I TACGTA 1 cut(s) 204
Eco24I GRGCYC 1 cut(s) 1111
Eco53kI GAGCTC 1 cut(s) 1109
Eco57I CTGAAG 2 cut(s) 67, 498
Eco81I CCTNAGG 1 cut(s) 300
EcoICRI GAGCTC 1 cut(s) 1109
EcoRII CCWGG 3 cut(s) 646, 853, 1029
EcoT38I GRGCYC 1 cut(s) 1111
Esp3I CGTCTC 1 cut(s) 61
FaeI CATG 3 cut(s) 200, 573, 771
FalI AAGNNNNNCTT 2 cut(s) 293, 325
FaqI GGGAC 2 cut(s) 242, 1056
FatI CATG 3 cut(s) 196, 569, 767
FauI CCCGC 1 cut(s) 935
FauNDI CATATG 1 cut(s) 884
Fnu4HI GCNGC 3 cut(s) 482, 729, 1065
FokI GGATG 2 cut(s) 57, 1112
FriOI GRGCYC 1 cut(s) 1111
Fsp4HI GCNGC 3 cut(s) 482, 729, 1065
FspBI CTAG 3 cut(s) 105, 953, 1025
GluI GCNGC 3 cut(s) 482, 729, 1065
HaeIII GGCC 2 cut(s) 481, 1029
HapII CCGG 3 cut(s) 341, 372, 477
HgaI GACGC 1 cut(s) 877
Hin1II CATG 3 cut(s) 200, 573, 771
HincII GTYRAC 1 cut(s) 682
HindII GTYRAC 1 cut(s) 682
HindIII AAGCTT 1 cut(s) 557
HpaII CCGG 3 cut(s) 341, 372, 477
HphI GGTGA 1 cut(s) 146
Hpy166II GTNNAC 2 cut(s) 380, 682
Hpy188I TCNGA 2 cut(s) 194, 940
Hpy188III TCNNGA 4 cut(s) 153, 701, 944, 1041
Hpy8I GTNNAC 2 cut(s) 380, 682
HpyAV CCTTC 2 cut(s) 125, 1014
HpyCH4III ACNGT 3 cut(s) 607, 640, 1076
HpyCH4IV ACGT 2 cut(s) 203, 678
HpyCH4V TGCA 8 cut(s) 4, 21, 209, 220, 848, 1010, 1052, 1064
HpyF10VI GCNNNNNNNGC 2 cut(s) 27, 206
HpyF3I CTNAG 1 cut(s) 300
HpySE526I ACGT 2 cut(s) 203, 678
Hsp92II CATG 3 cut(s) 200, 573, 771
Kzo9I GATC 6 cut(s) 165, 469, 492, 714, 764, 940
LmnI GCTCC 3 cut(s) 343, 625, 1106
Lsp1109I GCAGC 2 cut(s) 715, 1076
LweI GCATC 5 cut(s) 127, 763, 982, 1039, 1051
MaeI CTAG 3 cut(s) 105, 953, 1025
MaeII ACGT 2 cut(s) 203, 678
MaeIII GTNAC 3 cut(s) 542, 563, 709
MalI GATC 6 cut(s) 167, 471, 494, 716, 766, 942
MboI GATC 6 cut(s) 165, 469, 492, 714, 764, 940
MboII GAAGA 6 cut(s) 138, 504, 651, 654, 689, 826
MflI RGATCY 1 cut(s) 469
MhlI GDGCHC 3 cut(s) 282, 630, 1111
MluCI AATT 6 cut(s) 36, 49, 529, 778, 919, 983
MmeI TCCRAC 1 cut(s) 172
MnlI CCTC 2 cut(s) 1028, 1090
MseI TTAA 4 cut(s) 311, 777, 902, 1114
MslI CAYNNNNRTG 1 cut(s) 275
MspI CCGG 3 cut(s) 341, 372, 477
MspR9I CCNGG 4 cut(s) 478, 648, 855, 1031
Mva1269I GAATGC 1 cut(s) 541
MvaI CCWGG 3 cut(s) 648, 855, 1031
MvnI CGCG 1 cut(s) 930
MwoI GCNNNNNNNGC 2 cut(s) 27, 206
NciI CCSGG 1 cut(s) 478
NdeI CATATG 1 cut(s) 884
NdeII GATC 6 cut(s) 165, 469, 492, 714, 764, 940
NheI GCTAGC 1 cut(s) 952
NlaIII CATG 3 cut(s) 200, 573, 771
NlaIV GGNNCC 1 cut(s) 471
NmeAIII GCCGAG 2 cut(s) 730, 936
NspI RCATGY 1 cut(s) 200
OliI CACNNNNGTG 1 cut(s) 275
PctI GAATGC 1 cut(s) 541
PkrI GCNGC 3 cut(s) 483, 730, 1066
Ple19I CGATCG 1 cut(s) 717
Ppu21I YACGTR 1 cut(s) 204
PsiI TTATAA 1 cut(s) 836
Psp124BI GAGCTC 1 cut(s) 1111
Psp6I CCWGG 3 cut(s) 646, 853, 1029
PspGI CCWGG 3 cut(s) 646, 853, 1029
PspN4I GGNNCC 1 cut(s) 471
PspPI GGNCC 1 cut(s) 479
PstNI CAGNNNCTG 1 cut(s) 854
PsuI RGATCY 1 cut(s) 469
PvuI CGATCG 1 cut(s) 717
RsaI GTAC 4 cut(s) 109, 120, 308, 379
RsaNI GTAC 4 cut(s) 108, 119, 307, 378
RseI CAYNNNNRTG 1 cut(s) 275
SacI GAGCTC 1 cut(s) 1111
SaqAI TTAA 4 cut(s) 311, 777, 902, 1114
SatI GCNGC 3 cut(s) 482, 729, 1065
Sau3AI GATC 6 cut(s) 165, 469, 492, 714, 764, 940
Sau96I GGNCC 1 cut(s) 479
ScaI AGTACT 2 cut(s) 120, 308
ScrFI CCNGG 4 cut(s) 478, 648, 855, 1031
SduI GDGCHC 3 cut(s) 282, 630, 1111
SetI ASST 9 cut(s) 136, 206, 225, 561, 603, 681, 696, 1059, 1111
SfaNI GCATC 5 cut(s) 127, 763, 982, 1039, 1051
SmiMI CAYNNNNRTG 1 cut(s) 275
SmlI CTYRAG 2 cut(s) 161, 944
SmoI CTYRAG 2 cut(s) 161, 944
SnaBI TACGTA 1 cut(s) 204
Sse9I AATT 6 cut(s) 36, 49, 529, 778, 919, 983
SsiI CCGC 2 cut(s) 482, 928
SspI AATATT 1 cut(s) 25
SspMI CTAG 3 cut(s) 105, 953, 1025
SstI GAGCTC 1 cut(s) 1111
StyD4I CCNGG 4 cut(s) 476, 646, 853, 1029
TaaI ACNGT 3 cut(s) 607, 640, 1076
TaiI ACGT 2 cut(s) 206, 681
TaqI TCGA 4 cut(s) 99, 282, 447, 782
TaqII GACCGA 1 cut(s) 132
TasI AATT 6 cut(s) 36, 49, 529, 778, 919, 983
TatI WGTACW 3 cut(s) 107, 118, 306
TauI GCSGC 1 cut(s) 484
Tru1I TTAA 4 cut(s) 311, 777, 902, 1114
Tru9I TTAA 4 cut(s) 311, 777, 902, 1114
TscAI CASTG 3 cut(s) 238, 387, 556
TseI GCWGC 2 cut(s) 728, 1064
TspDTI ATGAA 5 cut(s) 34, 138, 144, 519, 850
TspRI CASTG 3 cut(s) 238, 387, 556
XceI RCATGY 1 cut(s) 200
XspI CTAG 3 cut(s) 105, 953, 1025
ZrmI AGTACT 2 cut(s) 120, 308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.