Rh1DG264400

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
Physical Location & Seq
Reverse (-)
48151436 .. 48157567
6132 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG264400.1

Sequence Viewer

Length: 2496 bp
ATGATGTCTGAAAGCACAAGCAGCAGCATTCAAGCAATATGCTTGTGCAATATTTGCTTCCCACTTATTTTCATCAATTTCTTCTCTCACATTGCTCATCCACTCTCCTTCAGTATAAATCAGTTCAGCGCTAGTACAGATGGAGTTATCTATGAAGGTGAGGCTCGGCCTTTATCGGGAAAGATTGAGCTCAACACAGGCCTAGAATTCAAGGTTGGACATGCTATGTATGCAGAACCTTTGCCCCTATGGGACAATGCTACTGGGTCACTGGCAGATTTCACTACTCATTTCACTTTCATGGTCAACTCTAATTACTTGGACTTCAGCGATGGATTTGCCTTTTACCTTGCTCCTGTTGGCTACGGTATTCCACCCAACTCTGCCGGTGGTGAACTGGGATTATTCAACACCACCACCAATTTTAATGCCAAGATTGTAACCGTAGAGTTCGACTCCTGGAGAAACGATAAAGAAGGTTGGGATCCAGACTGGCCGCATATTGGGATAAACATCAATGAAATCTCTTCGGTTACGTCCGCCAAATGGAATGCCAGTGACGTCATCGGGAAGACAGGTAATGCATGGATTACTTACAACACTACTGCCAACAACCTTACTGTGTTTTGGACATTCGAGGAAAACACAAACCCCTTTTTTCCAGGCAATACTACTTCTTCCCTTACTTACCATGTTGACTTGCGAAAGATTCTCCCCGAAAATGTTACAATTGGTTTTTCTGCTTCCTGCGGATCTAATACTGCGAGGTATTCTTTACATTCATGGGCGTTTAATTCGACTTTGTTGGATAACGATATTGGAAGAGCCGAAAGCAAGGGAAAGAAGAAAAAGATATTCTTGATACTGGTAATTGCAGTACCTGGCTTCATTTTCATGCTTGGTGCAGTCATATGTTGGTTGATGGTATTAAGGAATCGGAGAAACAATTACTCCGTCCCAGTCTCTGATCTTGAGAAGCTAGCCTTTCCAAAACGATTTGCTTACCAAGAATTGTTTGCTGCCACCAACGGGTTTTCAGATGATAGAAGGCTAGGCCAAGGAGCGTCGGGACAAGTATATAAAGGACTCCTACAAGACCTTGGAGGCTGCACAGTTGCCGTGAAGAGAATCTTAGCAAAATCTGATCAGCAAGATGAGAAAGTCTTCATCAATGAAGTCAAAATCATCAACCGCTTAATCCATCGAAACCTGGTGCAGTTCATTGGGTGGTGTCATGAGCAAGGGGAAGGCTTACTTGTTTTTGCATATATGCCAAACACCAGCCTCGACACGCATCTATTTGGCAACAGAACAACCCTGCAATGGGACAACAGGTACAAGATAGCTTTGGGCTTGGCCTCAGCCCTTCACTATCTACATGAAGATGCAGAGCAGTGTGTACTTCATATGGATATCAAATCAGCTAACGTAATGTTGGATGATGACTTCAGCACTAAGCTTGGTGATTTTGGTATTGCTAAGCTCGTGGATCCCAGCTTGAGGTCTCAGACAAGAGGGGTGGTAGGGACTTATGGATACATGGCCCCGGAATATGCTAATGAAGGGAGGGCTAGTTTTAAAATATTAAAGTACATCTTTGAAACTTATTTGGATTTGCGGCAACACTTAGCTCTCAAGCTTCCAACCCTTCCTACAGCTCTGGAAGGAGTAATCAGCCAAGAAAAGTTTGAGAAGTCACGAGCCTACCGTCTTGAGAAAAGGAATCAGGAGACTGTAGTTTTAGCTGGCCTCAATGCTGAAAATGAAATACTACATACCCTTGCATTTTTAGGTGGAATGATGATTTGGTCAAAGATAAAAAAGTTACCATTTTCTCTGTACTCCACATTTGTGATCGAGGCTCGTCATGGTTTTAATAAGCGAACAATATGGTTATTCTTTAGAGACCTTTTTAAAGGAATATGTATCTCTGTCATCCTTGCCCCACCTATTGTGTCTGCAATCATTGTAATTGTACAGAAAGGAGCCCCACTCTTTAACAAGTTCACCCCTCTTCAAGAGGGTCAGCTCAGGGAAAAAATTGAGAAGCTCTGTTCTTCCCTTGATTTTCCATTGAAGAAGCTGCCCTATATGTATGGTTTTTCTAACAACAAGAGAATTGTCCTCTATGATACACTGATTCAGCAGTGCAAAAATGAAGAGGAAGTTGTAGCTGTTCTATCTCATGAGCTAGGCCATTGGAAGCTTAATCACAGAGTGTACTTATTTATTTCTGGGCAGCATACCATTACACCTATTCGACACCTAGTACGCTTTGCTAGTAACCTTGTGAGCCGAGCTTTTGAATTTCAGGTTGATGATTTTGCTAAGAAACTTGGTTATGCCTCTTCACTTCGAGCCTGTCTAGTCAGGCTGCAGGAAGAGAATCTGTCAGCTATGAACATCGATCCATGGTACTCGGCATATCACCGTTCTCATCCCCCACTTGTTCAAAGGTTGGCTGCAATTGGTGATGAGGACAAGAAAGCAGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

831

Amino Acids

93.69

Weight (kDa)

7.61

Isoelectric Point (pI)

36.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 35 - 270 2.4e-60 Legume lectin domain
Pkinase PF00069 346 - 520 5.3e-36 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 348 - 527 5.7e-33 Protein tyrosine and serine/threonine kinase
Peptidase_M48_N PF16491 584 - 666 4.6e-26 CAAX prenyl protease N-terminal, five membrane helices
Peptidase_M48 PF01435 671 - 824 1.3e-21 Peptidase family M48
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 564
AciI CCGC 5 cut(s) 497, 540, 750, 1192, 1618
AclWI GGATC 6 cut(s) 479, 492, 760, 1484, 1497, 2402
AcoI YGGCCR 1 cut(s) 494
AcsI RAATTY 2 cut(s) 206, 2306
AcuI CTGAAG 3 cut(s) 94, 310, 1432
AcyI GRCGYC 1 cut(s) 561
AdeI CACNNNGTG 1 cut(s) 2218
AfeI AGCGCT 1 cut(s) 130
AfiI CCNNNNNNNGG 7 cut(s) 176, 503, 546, 1029, 1323, 1324, 1500
AgsI TTSAA 8 cut(s) 32, 211, 409, 1601, 2018, 2077, 2306, 2453
AjnI CCWGG 4 cut(s) 458, 661, 880, 1209
AjuI GAANNNNNNNTTGG 4 cut(s) 198, 230, 1789, 1821
AleI CACNNNNGTG 1 cut(s) 1850
Alw21I GWGCWC 1 cut(s) 192
Alw26I GTCTC 4 cut(s) 967, 1509, 1724, 1899
AlwI GGATC 6 cut(s) 479, 492, 760, 1484, 1497, 2402
AlwNI CAGNNNCTG 2 cut(s) 881, 965
Aor51HI AGCGCT 1 cut(s) 130
AoxI GGCC 8 cut(s) 167, 199, 494, 1054, 1356, 1542, 1747, 2194
ApeKI GCWGC 8 cut(s) 21, 24, 1019, 1107, 2083, 2239, 2374, 2462
ApoI RAATTY 2 cut(s) 206, 2306
Asp700I GAANNNNTTC 1 cut(s) 1163
AspLEI GCGC 1 cut(s) 131
AspS9I GGNCC 1 cut(s) 1543
AsuC2I CCSGG 1 cut(s) 1547
AsuHPI GGTGA 6 cut(s) 170, 404, 1475, 1999, 2420, 2483
AsuNHI GCTAGC 1 cut(s) 979
BamHI GGATCC 2 cut(s) 484, 1489
BanII GRGCYC 2 cut(s) 192, 1990
BauI CACGAG 2 cut(s) 1484, 1698
BbsI GAAGAC 2 cut(s) 578, 1156
Bbv12I GWGCWC 1 cut(s) 192
BbvCI CCTCAGC 1 cut(s) 1360
BbvI GCAGC 8 cut(s) 33, 36, 1006, 1094, 2070, 2251, 2361, 2449
BccI CCATC 4 cut(s) 134, 326, 916, 1209
BceAI ACGGC 1 cut(s) 1103
BcgI CGANNNNNNTGC 2 cut(s) 320, 354
BciT130I CCWGG 4 cut(s) 460, 663, 882, 1211
BciVI GTATCC 1 cut(s) 1529
BclI TGATCA 1 cut(s) 1144
BcnI CCSGG 1 cut(s) 1547
BcoDI GTCTC 4 cut(s) 967, 1509, 1724, 1899
BfaI CTAG 9 cut(s) 132, 203, 980, 1052, 1572, 2192, 2267, 2280, 2366
BfmI CTRYAG 3 cut(s) 1653, 1734, 2375
BfoI RGCGCY 1 cut(s) 132
BfuI GTATCC 1 cut(s) 1529
BlpI GCTNAGC 1 cut(s) 1479
Bme1390I CCNGG 5 cut(s) 460, 663, 882, 1211, 1547
BmgT120I GGNCC 1 cut(s) 1543
BmiI GGNNCC 4 cut(s) 486, 1491, 1545, 1987
BmrFI CCNGG 5 cut(s) 460, 663, 882, 1211, 1547
BmrI ACTGGG 3 cut(s) 273, 407, 953
BmsI GCATC 2 cut(s) 1303, 1375
BmtI GCTAGC 1 cut(s) 983
BmuI ACTGGG 3 cut(s) 273, 407, 953
BpiI GAAGAC 2 cut(s) 578, 1156
BplI GAGNNNNNCTC 4 cut(s) 440, 472, 1977, 2009
BpmI CTGGAG 1 cut(s) 481
Bpu10I CCTNAGC 2 cut(s) 1360, 2030
Bpu1102I GCTNAGC 1 cut(s) 1479
BpuEI CTTGAG 4 cut(s) 992, 1519, 1619, 1733
BpuMI CCSGG 1 cut(s) 1547
Bsa29I ATCGAT 1 cut(s) 2406
BsaBI GATNNNNATC 1 cut(s) 512
BsaHI GRCGYC 1 cut(s) 561
BsaI GGTCTC 2 cut(s) 1509, 1899
BsaJI CCNNGG 4 cut(s) 1057, 1099, 1545, 2411
BsaXI ACNNNNNCTCC 4 cut(s) 935, 965, 1558, 1588
Bsc4I CCNNNNNNNGG 7 cut(s) 176, 503, 546, 1029, 1323, 1324, 1500
Bse118I RCCGGY 1 cut(s) 386
Bse1I ACTGG 7 cut(s) 268, 276, 402, 497, 555, 870, 959
Bse3DI GCAATG 2 cut(s) 90, 1328
Bse8I GATNNNNATC 1 cut(s) 512
BseBI CCWGG 4 cut(s) 460, 663, 882, 1211
BseCI ATCGAT 1 cut(s) 2406
BseDI CCNNGG 4 cut(s) 1057, 1099, 1545, 2411
BseGI GGATG 4 cut(s) 97, 1444, 1935, 2437
BseJI GATNNNNATC 1 cut(s) 512
BseLI CCNNNNNNNGG 7 cut(s) 176, 503, 546, 1029, 1323, 1324, 1500
BseMI GCAATG 2 cut(s) 90, 1328
BseMII CTCAG 3 cut(s) 1374, 1520, 2044
BseNI ACTGG 7 cut(s) 268, 276, 402, 497, 555, 870, 959
BseXI GCAGC 8 cut(s) 33, 36, 1006, 1094, 2070, 2251, 2361, 2449
BseYI CCCAGC 1 cut(s) 1493
BsgI GTGCAG 3 cut(s) 924, 1093, 1235
BshFI GGCC 8 cut(s) 169, 201, 496, 1056, 1358, 1544, 1749, 2196
BshVI ATCGAT 1 cut(s) 2406
BsiHKAI GWGCWC 1 cut(s) 192
BsiSI CCGG 2 cut(s) 387, 1547
BslFI GGGAC 5 cut(s) 266, 941, 1083, 1340, 1540
BslI CCNNNNNNNGG 7 cut(s) 176, 503, 546, 1029, 1323, 1324, 1500
BsmAI GTCTC 4 cut(s) 967, 1509, 1724, 1899
BsmFI GGGAC 5 cut(s) 266, 941, 1083, 1340, 1540
BsmI GAATGC 2 cut(s) 27, 556
BsnI GGCC 8 cut(s) 169, 201, 496, 1056, 1358, 1544, 1749, 2196
Bso31I GGTCTC 2 cut(s) 1509, 1899
Bsp1286I GDGCHC 2 cut(s) 192, 1990
Bsp1407I TGTACA 1 cut(s) 1975
Bsp143I GATC 7 cut(s) 484, 752, 967, 1144, 1489, 1854, 2407
Bsp1720I GCTNAGC 1 cut(s) 1479
Bsp19I CCATGG 1 cut(s) 2411
BspACI CCGC 5 cut(s) 497, 540, 750, 1192, 1618
BspANI GGCC 8 cut(s) 169, 201, 496, 1056, 1358, 1544, 1749, 2196
BspCNI CTCAG 3 cut(s) 1373, 1519, 2043
BspDI ATCGAT 1 cut(s) 2406
BspHI TCATGA 2 cut(s) 1234, 2185
BspLI GGNNCC 4 cut(s) 486, 1491, 1545, 1987
BspMAI CTGCAG 1 cut(s) 2379
BspOI GCTAGC 1 cut(s) 983
BspPI GGATC 6 cut(s) 479, 492, 760, 1484, 1497, 2402
BspQI GCTCTTC 1 cut(s) 817
BspTNI GGTCTC 2 cut(s) 1509, 1899
BsrDI GCAATG 2 cut(s) 90, 1328
BsrFI RCCGGY 1 cut(s) 386
BsrGI TGTACA 1 cut(s) 1975
BsrI ACTGG 7 cut(s) 268, 276, 402, 497, 555, 870, 959
BssAI RCCGGY 1 cut(s) 386
BssECI CCNNGG 4 cut(s) 1057, 1099, 1545, 2411
BssMI GATC 7 cut(s) 484, 752, 967, 1144, 1489, 1854, 2407
BssNI GRCGYC 1 cut(s) 561
BssSI CACGAG 2 cut(s) 1484, 1698
BssT1I CCWWGG 3 cut(s) 1057, 1099, 2411
Bst2BI CACGAG 2 cut(s) 1484, 1698
Bst2UI CCWGG 4 cut(s) 460, 663, 882, 1211
Bst4CI ACNGT 7 cut(s) 368, 445, 622, 1114, 1709, 1735, 2432
Bst6I CTCTTC 7 cut(s) 532, 817, 1118, 2019, 2154, 2353, 2376
BstACI GRCGYC 1 cut(s) 561
BstAPI GCANNNNNTGC 1 cut(s) 54
BstAUI TGTACA 1 cut(s) 1975
BstC8I GCNNGC 2 cut(s) 981, 1747
BstDEI CTNAG 8 cut(s) 1132, 1360, 1455, 1479, 1506, 1627, 2030, 2328
BstDSI CCRYGG 1 cut(s) 2411
BstF5I GGATG 4 cut(s) 97, 1444, 1935, 2437
BstH2I RGCGCY 1 cut(s) 132
BstHHI GCGC 1 cut(s) 131
BstKTI GATC 7 cut(s) 487, 755, 970, 1147, 1492, 1857, 2410
BstMAI GTCTC 4 cut(s) 967, 1509, 1724, 1899
BstMBI GATC 7 cut(s) 484, 752, 967, 1144, 1489, 1854, 2407
BstMWI GCNNNNNNNGC 3 cut(s) 21, 54, 230
BstNI CCWGG 4 cut(s) 460, 663, 882, 1211
BstNSI RCATGY 1 cut(s) 224
BstSCI CCNGG 5 cut(s) 458, 661, 880, 1209, 1545
BstSFI CTRYAG 3 cut(s) 1653, 1734, 2375
BstV1I GCAGC 8 cut(s) 33, 36, 1006, 1094, 2070, 2251, 2361, 2449
BstV2I GAAGAC 2 cut(s) 578, 1156
BstX2I RGATCY 3 cut(s) 484, 752, 1489
BstYI RGATCY 3 cut(s) 484, 752, 1489
Bsu15I ATCGAT 1 cut(s) 2406
BsuI GTATCC 1 cut(s) 1529
BsuRI GGCC 8 cut(s) 169, 201, 496, 1056, 1358, 1544, 1749, 2196
BsuTUI ATCGAT 1 cut(s) 2406
BtgI CCRYGG 1 cut(s) 2411
BtgZI GCGATG 1 cut(s) 345
BtsCI GGATG 4 cut(s) 97, 1444, 1935, 2437
BtsI GCAGTG 2 cut(s) 1400, 2153
BtsIMutI CAGTG 5 cut(s) 269, 562, 1400, 2135, 2153
Cac8I GCNNGC 2 cut(s) 981, 1747
CaiI CAGNNNCTG 2 cut(s) 881, 965
CciI TCATGA 2 cut(s) 1234, 2185
CfoI GCGC 1 cut(s) 131
Cfr10I RCCGGY 1 cut(s) 386
Cfr13I GGNCC 1 cut(s) 1543
ClaI ATCGAT 1 cut(s) 2406
CseI GACGC 1 cut(s) 1053
CsiI ACCWGGT 1 cut(s) 1209
CspCI CAANNNNNGTGG 2 cut(s) 1500, 1535
DdeI CTNAG 8 cut(s) 1132, 1360, 1455, 1479, 1506, 1627, 2030, 2328
DpnI GATC 7 cut(s) 486, 754, 969, 1146, 1491, 1856, 2409
DpnII GATC 7 cut(s) 484, 752, 967, 1144, 1489, 1854, 2407
DraI TTTAAA 2 cut(s) 1579, 1915
DraIII CACNNNGTG 1 cut(s) 2218
EaeI YGGCCR 1 cut(s) 494
Eam1104I CTCTTC 7 cut(s) 532, 817, 1118, 2019, 2154, 2353, 2376
EarI CTCTTC 7 cut(s) 532, 817, 1118, 2019, 2154, 2353, 2376
EciI GGCGGA 1 cut(s) 529
Ecl136II GAGCTC 1 cut(s) 190
Eco130I CCWWGG 3 cut(s) 1057, 1099, 2411
Eco147I AGGCCT 1 cut(s) 201
Eco24I GRGCYC 2 cut(s) 192, 1990
Eco31I GGTCTC 2 cut(s) 1509, 1899
Eco32I GATATC 1 cut(s) 1414
Eco47III AGCGCT 1 cut(s) 130
Eco53kI GAGCTC 1 cut(s) 190
Eco57I CTGAAG 3 cut(s) 94, 310, 1432
EcoICRI GAGCTC 1 cut(s) 190
EcoRI GAATTC 1 cut(s) 206
EcoRII CCWGG 4 cut(s) 458, 661, 880, 1209
EcoRV GATATC 1 cut(s) 1414
EcoT14I CCWWGG 3 cut(s) 1057, 1099, 2411
EcoT22I ATGCAT 1 cut(s) 586
EcoT38I GRGCYC 2 cut(s) 192, 1990
ErhI CCWWGG 3 cut(s) 1057, 1099, 2411
FaqI GGGAC 5 cut(s) 266, 941, 1083, 1340, 1540
FauNDI CATATG 2 cut(s) 911, 1407
FbaI TGATCA 1 cut(s) 1144
FokI GGATG 4 cut(s) 84, 1451, 1922, 2424
FriOI GRGCYC 2 cut(s) 192, 1990
FspBI CTAG 9 cut(s) 132, 203, 980, 1052, 1572, 2192, 2267, 2280, 2366
GlaI GCGC 1 cut(s) 130
GsaI CCCAGC 1 cut(s) 1497
GsuI CTGGAG 1 cut(s) 481
HaeII RGCGCY 1 cut(s) 132
HaeIII GGCC 8 cut(s) 169, 201, 496, 1056, 1358, 1544, 1749, 2196
HapII CCGG 2 cut(s) 387, 1547
HgaI GACGC 1 cut(s) 1053
HhaI GCGC 1 cut(s) 131
Hin1I GRCGYC 1 cut(s) 561
Hin6I GCGC 1 cut(s) 129
HinP1I GCGC 1 cut(s) 129
HincII GTYRAC 2 cut(s) 307, 697
HindII GTYRAC 2 cut(s) 307, 697
HindIII AAGCTT 3 cut(s) 1457, 1637, 2204
HinfI GANTC 8 cut(s) 455, 709, 934, 1086, 1128, 1723, 2140, 2386
HpaII CCGG 2 cut(s) 387, 1547
HphI GGTGA 6 cut(s) 170, 404, 1475, 1999, 2420, 2483
Hpy166II GTNNAC 6 cut(s) 307, 395, 697, 1400, 2007, 2221
Hpy188I TCNGA 6 cut(s) 10, 939, 967, 1039, 1144, 1509
Hpy8I GTNNAC 6 cut(s) 307, 395, 697, 1400, 2007, 2221
Hpy99I CGWCG 1 cut(s) 1069
HpyAV CCTTC 9 cut(s) 118, 149, 470, 1041, 1241, 1376, 1556, 1658, 1658
HpyCH4III ACNGT 7 cut(s) 368, 445, 622, 1114, 1709, 1735, 2432
HpyCH4IV ACGT 3 cut(s) 536, 561, 1428
HpyF10VI GCNNNNNNNGC 3 cut(s) 21, 54, 230
HpyF3I CTNAG 8 cut(s) 1132, 1360, 1455, 1479, 1506, 1627, 2030, 2328
HpySE526I ACGT 3 cut(s) 536, 561, 1428
Hsp92I GRCGYC 1 cut(s) 561
HspAI GCGC 1 cut(s) 129
Ksp22I TGATCA 1 cut(s) 1144
Kzo9I GATC 7 cut(s) 484, 752, 967, 1144, 1489, 1854, 2407
LguI GCTCTTC 1 cut(s) 817
LmnI GCTCC 3 cut(s) 358, 1061, 1985
Lsp1109I GCAGC 8 cut(s) 33, 36, 1006, 1094, 2070, 2251, 2361, 2449
LweI GCATC 2 cut(s) 1303, 1375
MabI ACCWGGT 1 cut(s) 1209
MaeI CTAG 9 cut(s) 132, 203, 980, 1052, 1572, 2192, 2267, 2280, 2366
MaeII ACGT 3 cut(s) 536, 561, 1428
MaeIII GTNAC 8 cut(s) 267, 439, 532, 557, 724, 1695, 1824, 2282
MalI GATC 7 cut(s) 486, 754, 969, 1146, 1491, 1856, 2409
MboI GATC 7 cut(s) 484, 752, 967, 1144, 1489, 1854, 2407
MfeI CAATTG 2 cut(s) 729, 2466
MflI RGATCY 3 cut(s) 484, 752, 1489
MhlI GDGCHC 2 cut(s) 192, 1990
MlyI GAGTC 2 cut(s) 449, 1080
MmeI TCCRAC 4 cut(s) 196, 786, 1416, 1667
Mph1103I ATGCAT 1 cut(s) 586
MroXI GAANNNNTTC 1 cut(s) 1163
MslI CAYNNNNRTG 4 cut(s) 299, 893, 1383, 1850
MspI CCGG 2 cut(s) 387, 1547
MspR9I CCNGG 5 cut(s) 460, 663, 882, 1211, 1547
MunI CAATTG 2 cut(s) 729, 2466
Mva1269I GAATGC 2 cut(s) 27, 556
MvaI CCWGG 4 cut(s) 460, 663, 882, 1211
MwoI GCNNNNNNNGC 3 cut(s) 21, 54, 230
NciI CCSGG 1 cut(s) 1547
NcoI CCATGG 1 cut(s) 2411
NdeI CATATG 2 cut(s) 911, 1407
NdeII GATC 7 cut(s) 484, 752, 967, 1144, 1489, 1854, 2407
NheI GCTAGC 1 cut(s) 979
NlaIV GGNNCC 4 cut(s) 486, 1491, 1545, 1987
NmeAIII GCCGAG 3 cut(s) 145, 2321, 2399
NmuCI GTSAC 3 cut(s) 267, 557, 1695
NsiI ATGCAT 1 cut(s) 586
NspI RCATGY 1 cut(s) 224
OliI CACNNNNGTG 1 cut(s) 1850
PagI TCATGA 2 cut(s) 1234, 2185
PceI AGGCCT 1 cut(s) 201
PciSI GCTCTTC 1 cut(s) 817
PcsI WCGNNNNNNNCGW 1 cut(s) 1705
PctI GAATGC 2 cut(s) 27, 556
PdmI GAANNNNTTC 1 cut(s) 1163
PfeI GAWTC 6 cut(s) 709, 934, 1128, 1723, 2140, 2386
PfoI TCCNGGA 1 cut(s) 458
PleI GAGTC 2 cut(s) 449, 1080
PpsI GAGTC 2 cut(s) 449, 1080
Psp124BI GAGCTC 1 cut(s) 192
Psp6I CCWGG 4 cut(s) 458, 661, 880, 1209
PspFI CCCAGC 1 cut(s) 1493
PspGI CCWGG 4 cut(s) 458, 661, 880, 1209
PspN4I GGNNCC 4 cut(s) 486, 1491, 1545, 1987
PspPI GGNCC 1 cut(s) 1543
PstI CTGCAG 1 cut(s) 2379
PstNI CAGNNNCTG 2 cut(s) 881, 965
PsuI RGATCY 3 cut(s) 484, 752, 1489
RseI CAYNNNNRTG 4 cut(s) 299, 893, 1383, 1850
SacI GAGCTC 1 cut(s) 192
SapI GCTCTTC 1 cut(s) 817
Sau3AI GATC 7 cut(s) 484, 752, 967, 1144, 1489, 1854, 2407
Sau96I GGNCC 1 cut(s) 1543
SchI GAGTC 2 cut(s) 449, 1080
ScrFI CCNGG 5 cut(s) 460, 663, 882, 1211, 1547
SduI GDGCHC 2 cut(s) 192, 1990
SexAI ACCWGGT 1 cut(s) 1209
SfaNI GCATC 2 cut(s) 1303, 1375
SfcI CTRYAG 3 cut(s) 1653, 1734, 2375
SmiMI CAYNNNNRTG 4 cut(s) 299, 893, 1383, 1850
SmlI CTYRAG 4 cut(s) 971, 1498, 1634, 1712
SmoI CTYRAG 4 cut(s) 971, 1498, 1634, 1712
SseBI AGGCCT 1 cut(s) 201
SsiI CCGC 5 cut(s) 497, 540, 750, 1192, 1618
SspI AATATT 2 cut(s) 52, 1584
SspMI CTAG 9 cut(s) 132, 203, 980, 1052, 1572, 2192, 2267, 2280, 2366
SstI GAGCTC 1 cut(s) 192
StuI AGGCCT 1 cut(s) 201
StyD4I CCNGG 5 cut(s) 458, 661, 880, 1209, 1545
StyI CCWWGG 3 cut(s) 1057, 1099, 2411
TaaI ACNGT 7 cut(s) 368, 445, 622, 1114, 1709, 1735, 2432
TaiI ACGT 3 cut(s) 539, 564, 1431
TaqI TCGA 9 cut(s) 453, 636, 797, 1204, 1287, 1857, 2260, 2356, 2406
TatI WGTACW 6 cut(s) 134, 1399, 1590, 1839, 1975, 2220
TauI GCSGC 2 cut(s) 499, 1621
TfiI GAWTC 6 cut(s) 709, 934, 1128, 1723, 2140, 2386
TscAI CASTG 5 cut(s) 276, 562, 1400, 2142, 2153
TseFI GTSAC 3 cut(s) 267, 557, 1695
TseI GCWGC 8 cut(s) 21, 24, 1019, 1107, 2083, 2239, 2374, 2462
Tsp45I GTSAC 3 cut(s) 267, 557, 1695
TspGWI ACGGA 1 cut(s) 943
TspRI CASTG 5 cut(s) 276, 562, 1400, 2142, 2153
XapI RAATTY 2 cut(s) 206, 2306
XceI RCATGY 1 cut(s) 224
XmnI GAANNNNTTC 1 cut(s) 1163
XspI CTAG 9 cut(s) 132, 203, 980, 1052, 1572, 2192, 2267, 2280, 2366
ZraI GACGTC 1 cut(s) 562
Zsp2I ATGCAT 1 cut(s) 586
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.