RchiOBHm_Chr1g0340931

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
32539988 .. 32542210
2223 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56769

Sequence Viewer

Length: 2223 bp
ATGTCTCAGATGACAATTGAATCTCCCAGCGTTCCAACTTCCAACAGTTCACAGTTTCTCTCCCAAAAAAGATCAGAAATGGCCGTCAAATACTCTGTTAAAATCACAATCCAGTGCTCCCCAGAGCTGCTTCAATTCCTTATTCTGCTCTTCTTCCTTTTAACCTTCTCTGCAACCTCACTGACCTTCGAATTCTCCAGCTTTCCATTGTCAGTTGCCAACATCAATATATCCACCGAAGGAAATGCTACCCTTGATGGCTTCCTCCGACTCACCGCAAGTGCGCGTGACGTGGCAGGCAATTCGAGCGTTGGTAGAGCCACCTACAGAGAAAGCTTCCTCCTCCAACAAAAATCCACCGGAAAACTCGCTGATTTTACATCAAGCTTCAAATTCTCCATTAAGTCCGACTCCAGCAGCAACAAAACCGCTGATGGGCTGGCCTTCTTCCTAGCGCCGGCCGGGTCCTTACTGAACTTCAAATTAGGACAGGGTAGCAGTCTTGGTCTCCCTGTCGACAATACGCGGGACGACCGTACCAGGTGGAGTAATGAATACCCGTTTGTCGCCGTCGAGTTTGATACATTCCCATTTGGTGTTGATTGGGGTCTCAATGACAGTCATGTGGGCATCGACATCAACTCAGTCAACTCTAACGTTACCAAGCCATGGTCTGGTGGTTTTGAGAAAGAAGGAGAAAATGATGCCACAATTAGTTACGACTCCACCTCGAAAAATCTTAGTGTTACCTTCACTACGATTGAAACTGGTGTACAGGTGAACAAAAGTATCAGTTTGTTAGTTGATCTGCTTGATATCTTGCCTGATAGGGTCATCGTTGGGTTCTCTGCTTCAACGGGTGACTATTTTGCTCTGCATAAGATCATTTCTTGGAGCTTTAATTCAACTTCCTTGGTAGATGAAAATAAAACAAGCAGTACATCAAATCCTCCATCAAATCCTCCTAAGCCAATGGTCGAACCCAAGTCAGGAAATACCAATGTTGGACTAATAGTTGGGTTGGTTGTTGGGGGAGGTGTTATCTTGGCTGGTATGTTGGGTTTGGTTTGGTTCATCTTCTGCAGGAAGAGGAGGGAAACAGCTGGGGAAAGTACTGATGATGATACTAGGGTACTTAACGATTTGATCCCTGAAGAATTCGAAAAGGGGACAGGCCCTAGGAAGTTTTCGTACAATGAATTGGCCCTTGCAACTAGTAATTTTGGACAGGGAGAAAAGCTTGGCGAGGGAGGGTTTGGTGGAGTTTACAAGGGCTTCATCAAAGATATGAACTCGTATGTAGCTGTTAAGAAGATATCAAGGGGGTCTAAACAAGGGCTGAAGGAGTATGCAGCAGAAGTGAGTATCATTAGTAGGCTGAGACATCGAAATCTGGTGCAACTCATAGGTTGGTGCCACGAAAAGAAACTCCTACTTGTCTACGAGTTCATGCCCAATGGTAGTTTGGACTCTCATTTGTTCAAAGAAAAAACCTTGTTAACGTGGGAGGTAAGATACAAAATTGCACATGGATTGGCCTCGGGATTGCTCTATCTACACCAAGAATGGGAACAATGTGTGCTGCACAGGGATATTAAATCCAGTAATGTTATGTTGGATTCCAATTTTAACGCGAAACTTGGAGATTTTGGGTTAGCCAGACTCGTAGACCACGGAAAACTATCGCAAACAACAATTGTGGCGGGAACCATGGGCTACATGGCTATGGAATACGTTACAACAGGAAAGGCTAGCAAGGAATCAGATGTCTATAGTTTCGGAGTTGTGGCTTTGGAAATAGCTTGTGGGAGAAAACCCATCGATCCCAGGTATGAAGGAAAGCAAAACAATCTGGTGGAGTGGGTTTGGGAGCTCTATGGAGAAGGGAAAATCATTGAAGCAGCGGACCCAAAATTGTGGGGGGATTTTGATGAGAAGCAAATGGAGTGCTTGATGATTGTCGGGTTATGGTGTGCTCATCCGGATTACAACTCTAGGCCTTTGATCCAACAAGCAATTCAAGTACTTAACTTTGAAGTTCCACTGCCCAAACTACCATTAAAGATGCCGGTGGCTGCTTTTCCATTATCACTCTCGATGTTGTATAGTGGTGACACTAAGGGAGGTCAAAGTGAGTCTTCAGGATATGGTTCTACCATCGACTCCTCACAGTTCACCTCATCTTTTAGCACAAAGTCCAATCCGTCAGTAAATTTTCAGTAA

Protein Analysis

740

Amino Acids

81.3

Weight (kDa)

5.75

Isoelectric Point (pI)

31.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 61 - 313 2.3e-56 Legume lectin domain
Lectin_L-type_dom PF18483 101 - 295 6.2e-06 Legume lectin beta-barrel domain
Pkinase PF00069 410 - 674 2.4e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 411 - 611 6.5e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1413
AccB7I CCANNNNNTGG 2 cut(s) 669, 674
AccI GTMKAC 3 cut(s) 516, 1440, 1668
AccII CGCG 3 cut(s) 286, 526, 1634
AccIII TCCGGA 1 cut(s) 1981
AciI CCGC 5 cut(s) 276, 429, 526, 1703, 1904
AclI AACGTT 1 cut(s) 657
AclWI GGATC 3 cut(s) 1141, 1817, 1999
AcoI YGGCCR 2 cut(s) 81, 459
AcsI RAATTY 4 cut(s) 191, 392, 1157, 2212
AcuI CTGAAG 3 cut(s) 1173, 1361, 2124
AfaI GTAC 7 cut(s) 538, 774, 940, 1114, 1134, 1193, 2025
AfiI CCNNNNNNNGG 6 cut(s) 435, 457, 669, 674, 989, 1567
AhlI ACTAGT 1 cut(s) 1214
AjiI CACGTC 1 cut(s) 292
AjnI CCWGG 2 cut(s) 539, 1826
AjuI GAANNNNNNNTTGG 2 cut(s) 2001, 2033
Alw21I GWGCWC 3 cut(s) 119, 1875, 1978
Alw26I GTCTC 4 cut(s) 9, 512, 614, 1375
AlwI GGATC 3 cut(s) 1141, 1817, 1999
Ama87I CYCGRG 1 cut(s) 1540
Aor13HI TCCGGA 1 cut(s) 1981
AoxI GGCC 7 cut(s) 81, 441, 459, 1174, 1203, 1536, 1997
ApeKI GCWGC 6 cut(s) 127, 417, 1352, 1582, 1901, 2075
ApoI RAATTY 4 cut(s) 191, 392, 1157, 2212
AspA2I CCTAGG 1 cut(s) 1178
AspLEI GCGC 2 cut(s) 286, 457
AspS9I GGNCC 4 cut(s) 465, 1175, 1204, 1906
AsuC2I CCSGG 1 cut(s) 463
AsuHPI GGTGA 5 cut(s) 265, 790, 872, 2123, 2167
AsuII TTCGAA 2 cut(s) 189, 1161
AsuNHI GCTAGC 1 cut(s) 1751
AvaI CYCGRG 1 cut(s) 1540
AvaII GGWCC 2 cut(s) 465, 1906
AvrII CCTAGG 1 cut(s) 1178
BaeI ACNNNNGTAYC 6 cut(s) 520, 553, 772, 805, 1116, 1149
BanI GGYRCC 1 cut(s) 1413
BanII GRGCYC 1 cut(s) 1875
BarI GAAGNNNNNNTAC 2 cut(s) 1175, 1207
BbsI GAAGAC 1 cut(s) 2130
Bbv12I GWGCWC 3 cut(s) 119, 1875, 1978
BbvI GCAGC 6 cut(s) 114, 429, 1364, 1569, 1913, 2062
BccI CCATC 5 cut(s) 251, 428, 961, 1826, 2165
BceAI ACGGC 2 cut(s) 68, 554
BcgI CGANNNNNNTGC 4 cut(s) 227, 261, 285, 319
BciT130I CCWGG 2 cut(s) 541, 1828
BcnI CCSGG 1 cut(s) 463
BcoDI GTCTC 4 cut(s) 9, 512, 614, 1375
BcuI ACTAGT 1 cut(s) 1214
BfaI CTAG 6 cut(s) 452, 1128, 1179, 1215, 1752, 1995
BfmI CTRYAG 3 cut(s) 325, 1081, 1771
BfoI RGCGCY 1 cut(s) 458
BisI GCNGC 6 cut(s) 128, 418, 1353, 1583, 1902, 2076
BlnI CCTAGG 1 cut(s) 1178
BlsI GCNGC 6 cut(s) 129, 419, 1354, 1584, 1903, 2077
BmcAI AGTACT 2 cut(s) 1114, 2025
Bme1390I CCNGG 3 cut(s) 463, 541, 1828
Bme18I GGWCC 2 cut(s) 465, 1906
BmeT110I CYCGRG 1 cut(s) 1540
BmgBI CACGTC 1 cut(s) 292
BmgT120I GGNCC 4 cut(s) 465, 1175, 1204, 1906
BmiI GGNNCC 4 cut(s) 466, 1415, 1708, 1908
BmrFI CCNGG 3 cut(s) 463, 541, 1828
BmsI GCATC 3 cut(s) 639, 694, 2055
BmtI GCTAGC 1 cut(s) 1755
BpiI GAAGAC 1 cut(s) 2130
BpmI CTGGAG 2 cut(s) 181, 397
Bpu10I CCTNAGC 1 cut(s) 966
Bpu14I TTCGAA 2 cut(s) 189, 1161
BpuMI CCSGG 1 cut(s) 463
Bsa29I ATCGAT 1 cut(s) 1821
BsaI GGTCTC 2 cut(s) 512, 614
BsaJI CCNNGG 7 cut(s) 668, 912, 1178, 1539, 1672, 1710, 1826
BsaWI WCCGGW 2 cut(s) 359, 1981
Bsc4I CCNNNNNNNGG 6 cut(s) 435, 457, 669, 674, 989, 1567
Bse118I RCCGGY 2 cut(s) 457, 2068
Bse1I ACTGG 3 cut(s) 112, 772, 1602
BseAI TCCGGA 1 cut(s) 1981
BseBI CCWGG 2 cut(s) 541, 1828
BseCI ATCGAT 1 cut(s) 1821
BseDI CCNNGG 7 cut(s) 668, 912, 1178, 1539, 1672, 1710, 1826
BseGI GGATG 1 cut(s) 1978
BseLI CCNNNNNNNGG 6 cut(s) 435, 457, 669, 674, 989, 1567
BseMII CTCAG 3 cut(s) 20, 657, 1370
BseNI ACTGG 3 cut(s) 112, 772, 1602
BseRI GAGGAG 3 cut(s) 332, 1105, 2155
BseX3I CGGCCG 1 cut(s) 459
BseXI GCAGC 6 cut(s) 114, 429, 1364, 1569, 1913, 2062
BseYI CCCAGC 2 cut(s) 26, 1103
BsgI GTGCAG 1 cut(s) 1568
Bsh1236I CGCG 3 cut(s) 286, 526, 1634
Bsh1285I CGRYCG 2 cut(s) 462, 535
BshFI GGCC 7 cut(s) 83, 443, 461, 1176, 1205, 1538, 1999
BshNI GGYRCC 1 cut(s) 1413
BshVI ATCGAT 1 cut(s) 1821
BsiEI CGRYCG 2 cut(s) 462, 535
BsiHKAI GWGCWC 3 cut(s) 119, 1875, 1978
BsiHKCI CYCGRG 1 cut(s) 1540
BsiSI CCGG 5 cut(s) 360, 458, 462, 1982, 2069
BslFI GGGAC 2 cut(s) 542, 1183
BslI CCNNNNNNNGG 6 cut(s) 435, 457, 669, 674, 989, 1567
BsmAI GTCTC 4 cut(s) 9, 512, 614, 1375
BsmFI GGGAC 2 cut(s) 542, 1183
BsnI GGCC 7 cut(s) 83, 443, 461, 1176, 1205, 1538, 1999
Bso31I GGTCTC 2 cut(s) 512, 614
BsoBI CYCGRG 1 cut(s) 1540
Bsp119I TTCGAA 2 cut(s) 189, 1161
Bsp1286I GDGCHC 3 cut(s) 119, 1875, 1978
Bsp13I TCCGGA 1 cut(s) 1981
Bsp1407I TGTACA 1 cut(s) 772
Bsp143I GATC 6 cut(s) 71, 805, 882, 1146, 1822, 2004
Bsp19I CCATGG 2 cut(s) 668, 1710
BspACI CCGC 5 cut(s) 276, 429, 526, 1703, 1904
BspANI GGCC 7 cut(s) 83, 443, 461, 1176, 1205, 1538, 1999
BspCNI CTCAG 3 cut(s) 19, 656, 1371
BspDI ATCGAT 1 cut(s) 1821
BspEI TCCGGA 1 cut(s) 1981
BspFNI CGCG 3 cut(s) 286, 526, 1634
BspLI GGNNCC 4 cut(s) 466, 1415, 1708, 1908
BspMAI CTGCAG 1 cut(s) 1085
BspOI GCTAGC 1 cut(s) 1755
BspPI GGATC 3 cut(s) 1141, 1817, 1999
BspQI GCTCTTC 1 cut(s) 155
BspT104I TTCGAA 2 cut(s) 189, 1161
BspT107I GGYRCC 1 cut(s) 1413
BspTNI GGTCTC 2 cut(s) 512, 614
BsrFI RCCGGY 2 cut(s) 457, 2068
BsrGI TGTACA 1 cut(s) 772
BsrI ACTGG 3 cut(s) 112, 772, 1602
BssAI RCCGGY 2 cut(s) 457, 2068
BssECI CCNNGG 7 cut(s) 668, 912, 1178, 1539, 1672, 1710, 1826
BssMI GATC 6 cut(s) 71, 805, 882, 1146, 1822, 2004
BssT1I CCWWGG 4 cut(s) 668, 912, 1178, 1710
Bst2UI CCWGG 2 cut(s) 541, 1828
Bst4CI ACNGT 5 cut(s) 47, 54, 536, 620, 2172
Bst6I CTCTTC 2 cut(s) 155, 1082
BstAUI TGTACA 1 cut(s) 772
BstBI TTCGAA 2 cut(s) 189, 1161
BstC8I GCNNGC 4 cut(s) 298, 441, 459, 1753
BstDEI CTNAG 6 cut(s) 6, 643, 740, 966, 1379, 2118
BstDSI CCRYGG 3 cut(s) 668, 1672, 1710
BstF5I GGATG 1 cut(s) 1978
BstFNI CGCG 3 cut(s) 286, 526, 1634
BstH2I RGCGCY 1 cut(s) 458
BstHHI GCGC 2 cut(s) 286, 457
BstKTI GATC 6 cut(s) 74, 808, 885, 1149, 1825, 2007
BstMAI GTCTC 4 cut(s) 9, 512, 614, 1375
BstMBI GATC 6 cut(s) 71, 805, 882, 1146, 1822, 2004
BstMCI CGRYCG 2 cut(s) 462, 535
BstMWI GCNNNNNNNGC 1 cut(s) 306
BstNI CCWGG 2 cut(s) 541, 1828
BstSCI CCNGG 3 cut(s) 461, 539, 1826
BstSFI CTRYAG 3 cut(s) 325, 1081, 1771
BstUI CGCG 3 cut(s) 286, 526, 1634
BstV1I GCAGC 6 cut(s) 114, 429, 1364, 1569, 1913, 2062
BstV2I GAAGAC 1 cut(s) 2130
BstXI CCANNNNNNTGG 1 cut(s) 1917
BstZI CGGCCG 1 cut(s) 459
Bsu15I ATCGAT 1 cut(s) 1821
BsuRI GGCC 7 cut(s) 83, 443, 461, 1176, 1205, 1538, 1999
BsuTUI ATCGAT 1 cut(s) 1821
BtgI CCRYGG 3 cut(s) 668, 1672, 1710
BtrI CACGTC 1 cut(s) 292
BtsCI GGATG 1 cut(s) 1978
BtsI GCAGTG 1 cut(s) 2042
BtsIMutI CAGTG 3 cut(s) 119, 179, 2042
Cac8I GCNNGC 4 cut(s) 298, 441, 459, 1753
CfoI GCGC 2 cut(s) 286, 457
Cfr10I RCCGGY 2 cut(s) 457, 2068
Cfr13I GGNCC 4 cut(s) 465, 1175, 1204, 1906
ClaI ATCGAT 1 cut(s) 1821
CsiI ACCWGGT 1 cut(s) 539
Csp6I GTAC 7 cut(s) 537, 773, 939, 1113, 1133, 1192, 2024
CspCI CAANNNNNGTGG 2 cut(s) 1680, 1715
CviAII CATG 6 cut(s) 623, 669, 1450, 1529, 1711, 1720
CviQI GTAC 7 cut(s) 537, 773, 939, 1113, 1133, 1192, 2024
DdeI CTNAG 6 cut(s) 6, 643, 740, 966, 1379, 2118
DpnI GATC 6 cut(s) 73, 807, 884, 1148, 1824, 2006
DpnII GATC 6 cut(s) 71, 805, 882, 1146, 1822, 2004
EaeI YGGCCR 2 cut(s) 81, 459
EagI CGGCCG 1 cut(s) 459
Eam1104I CTCTTC 2 cut(s) 155, 1082
EarI CTCTTC 2 cut(s) 155, 1082
Ecl136II GAGCTC 1 cut(s) 1873
EclXI CGGCCG 1 cut(s) 459
Eco130I CCWWGG 4 cut(s) 668, 912, 1178, 1710
Eco147I AGGCCT 1 cut(s) 1999
Eco24I GRGCYC 1 cut(s) 1875
Eco31I GGTCTC 2 cut(s) 512, 614
Eco32I GATATC 2 cut(s) 817, 1317
Eco47I GGWCC 2 cut(s) 465, 1906
Eco52I CGGCCG 1 cut(s) 459
Eco53kI GAGCTC 1 cut(s) 1873
Eco57I CTGAAG 3 cut(s) 1173, 1361, 2124
Eco88I CYCGRG 1 cut(s) 1540
EcoICRI GAGCTC 1 cut(s) 1873
EcoO109I RGGNCCY 2 cut(s) 465, 1175
EcoRI GAATTC 2 cut(s) 191, 1157
EcoRII CCWGG 2 cut(s) 539, 1826
EcoRV GATATC 2 cut(s) 817, 1317
EcoT14I CCWWGG 4 cut(s) 668, 912, 1178, 1710
EcoT38I GRGCYC 1 cut(s) 1875
ErhI CCWWGG 4 cut(s) 668, 912, 1178, 1710
FaeI CATG 6 cut(s) 626, 672, 1453, 1532, 1714, 1723
FalI AAGNNNNNCTT 2 cut(s) 2122, 2154
FaqI GGGAC 2 cut(s) 542, 1183
FatI CATG 6 cut(s) 622, 668, 1449, 1528, 1710, 1719
FauI CCCGC 2 cut(s) 519, 1696
FblI GTMKAC 3 cut(s) 516, 1440, 1668
Fnu4HI GCNGC 6 cut(s) 128, 418, 1353, 1583, 1902, 2076
FokI GGATG 1 cut(s) 1965
FriOI GRGCYC 1 cut(s) 1875
Fsp4HI GCNGC 6 cut(s) 128, 418, 1353, 1583, 1902, 2076
FspBI CTAG 6 cut(s) 452, 1128, 1179, 1215, 1752, 1995
GlaI GCGC 2 cut(s) 285, 456
GluI GCNGC 6 cut(s) 128, 418, 1353, 1583, 1902, 2076
GsaI CCCAGC 2 cut(s) 30, 1107
GsuI CTGGAG 2 cut(s) 181, 397
HaeII RGCGCY 1 cut(s) 458
HaeIII GGCC 7 cut(s) 83, 443, 461, 1176, 1205, 1538, 1999
HapII CCGG 5 cut(s) 360, 458, 462, 1982, 2069
HhaI GCGC 2 cut(s) 286, 457
Hin1II CATG 6 cut(s) 626, 672, 1453, 1532, 1714, 1723
Hin6I GCGC 2 cut(s) 284, 455
HinP1I GCGC 2 cut(s) 284, 455
HincII GTYRAC 3 cut(s) 517, 649, 1500
HindII GTYRAC 3 cut(s) 517, 649, 1500
HindIII AAGCTT 3 cut(s) 334, 385, 1238
HpaI GTTAAC 1 cut(s) 1500
HpaII CCGG 5 cut(s) 360, 458, 462, 1982, 2069
HphI GGTGA 5 cut(s) 265, 790, 872, 2123, 2167
Hpy188I TCNGA 6 cut(s) 9, 76, 269, 409, 1765, 1781
Hpy188III TCNNGA 5 cut(s) 990, 1542, 1982, 2095, 2142
Hpy99I CGWCG 1 cut(s) 575
HpyAV CCTTC 9 cut(s) 175, 196, 233, 454, 686, 760, 1336, 1829, 1877
HpyCH4III ACNGT 5 cut(s) 47, 54, 536, 620, 2172
HpyCH4IV ACGT 4 cut(s) 291, 657, 1502, 1734
HpyCH4V TGCA 8 cut(s) 173, 877, 1083, 1211, 1352, 1399, 1526, 1585
HpyF10VI GCNNNNNNNGC 1 cut(s) 306
HpyF3I CTNAG 6 cut(s) 6, 643, 740, 966, 1379, 2118
HpySE526I ACGT 4 cut(s) 291, 657, 1502, 1734
Hsp92II CATG 6 cut(s) 626, 672, 1453, 1532, 1714, 1723
HspAI GCGC 2 cut(s) 284, 455
Kpn2I TCCGGA 1 cut(s) 1981
KroI GCCGGC 1 cut(s) 457
KroNI GCCGGC 1 cut(s) 459
KspAI GTTAAC 1 cut(s) 1500
Kzo9I GATC 6 cut(s) 71, 805, 882, 1146, 1822, 2004
LguI GCTCTTC 1 cut(s) 155
LmnI GCTCC 3 cut(s) 122, 894, 1870
Lsp1109I GCAGC 6 cut(s) 114, 429, 1364, 1569, 1913, 2062
LweI GCATC 3 cut(s) 639, 694, 2055
MabI ACCWGGT 1 cut(s) 539
MaeI CTAG 6 cut(s) 452, 1128, 1179, 1215, 1752, 1995
MaeII ACGT 4 cut(s) 291, 657, 1502, 1734
MaeIII GTNAC 7 cut(s) 287, 658, 716, 745, 860, 1735, 2111
MalI GATC 6 cut(s) 73, 807, 884, 1148, 1824, 2006
MboI GATC 6 cut(s) 71, 805, 882, 1146, 1822, 2004
MboII GAAGA 8 cut(s) 142, 145, 439, 1069, 1099, 1166, 1324, 2130
MfeI CAATTG 2 cut(s) 15, 1695
MhlI GDGCHC 3 cut(s) 119, 1875, 1978
MlyI GAGTC 7 cut(s) 264, 404, 716, 1463, 1656, 2144, 2156
MmeI TCCRAC 8 cut(s) 59, 66, 292, 370, 432, 985, 1596, 2032
MroI TCCGGA 1 cut(s) 1981
MroNI GCCGGC 1 cut(s) 457
MslI CAYNNNNRTG 1 cut(s) 1724
MspA1I CMGCKG 3 cut(s) 431, 1103, 1904
MspI CCGG 5 cut(s) 360, 458, 462, 1982, 2069
MspR9I CCNGG 3 cut(s) 463, 541, 1828
MunI CAATTG 2 cut(s) 15, 1695
MvaI CCWGG 2 cut(s) 541, 1828
MvnI CGCG 3 cut(s) 286, 526, 1634
MwoI GCNNNNNNNGC 1 cut(s) 306
NaeI GCCGGC 1 cut(s) 459
NciI CCSGG 1 cut(s) 463
NcoI CCATGG 2 cut(s) 668, 1710
NdeII GATC 6 cut(s) 71, 805, 882, 1146, 1822, 2004
NgoMIV GCCGGC 1 cut(s) 457
NheI GCTAGC 1 cut(s) 1751
NlaIII CATG 6 cut(s) 626, 672, 1453, 1532, 1714, 1723
NlaIV GGNNCC 4 cut(s) 466, 1415, 1708, 1908
NmuCI GTSAC 3 cut(s) 287, 860, 2111
NspV TTCGAA 2 cut(s) 189, 1161
PceI AGGCCT 1 cut(s) 1999
PciSI GCTCTTC 1 cut(s) 155
PdiI GCCGGC 1 cut(s) 459
PfeI GAWTC 3 cut(s) 20, 1619, 1760
PflMI CCANNNNNTGG 2 cut(s) 669, 674
PkrI GCNGC 6 cut(s) 129, 419, 1354, 1584, 1903, 2077
PleI GAGTC 7 cut(s) 264, 404, 716, 1463, 1656, 2143, 2156
PpsI GAGTC 7 cut(s) 264, 404, 716, 1463, 1656, 2143, 2156
PpuMI RGGWCCY 1 cut(s) 465
Psp124BI GAGCTC 1 cut(s) 1875
Psp1406I AACGTT 1 cut(s) 657
Psp5II RGGWCCY 1 cut(s) 465
Psp6I CCWGG 2 cut(s) 539, 1826
PspFI CCCAGC 2 cut(s) 26, 1103
PspGI CCWGG 2 cut(s) 539, 1826
PspN4I GGNNCC 4 cut(s) 466, 1415, 1708, 1908
PspPI GGNCC 4 cut(s) 465, 1175, 1204, 1906
PspPPI RGGWCCY 1 cut(s) 465
PstI CTGCAG 1 cut(s) 1085
PvuII CAGCTG 1 cut(s) 1103
RsaI GTAC 7 cut(s) 538, 774, 940, 1114, 1134, 1193, 2025
RsaNI GTAC 7 cut(s) 537, 773, 939, 1113, 1133, 1192, 2024
RseI CAYNNNNRTG 1 cut(s) 1724
SacI GAGCTC 1 cut(s) 1875
SalI GTCGAC 1 cut(s) 515
SapI GCTCTTC 1 cut(s) 155
SatI GCNGC 6 cut(s) 128, 418, 1353, 1583, 1902, 2076
Sau3AI GATC 6 cut(s) 71, 805, 882, 1146, 1822, 2004
Sau96I GGNCC 4 cut(s) 465, 1175, 1204, 1906
ScaI AGTACT 2 cut(s) 1114, 2025
SchI GAGTC 7 cut(s) 264, 404, 716, 1463, 1656, 2144, 2156
ScrFI CCNGG 3 cut(s) 463, 541, 1828
SduI GDGCHC 3 cut(s) 119, 1875, 1978
SexAI ACCWGGT 1 cut(s) 539
SfaNI GCATC 3 cut(s) 639, 694, 2055
SfcI CTRYAG 3 cut(s) 325, 1081, 1771
SfuI TTCGAA 2 cut(s) 189, 1161
SinI GGWCC 2 cut(s) 465, 1906
SmiMI CAYNNNNRTG 1 cut(s) 1724
SpeI ACTAGT 1 cut(s) 1214
SseBI AGGCCT 1 cut(s) 1999
SsiI CCGC 5 cut(s) 276, 429, 526, 1703, 1904
SspMI CTAG 6 cut(s) 452, 1128, 1179, 1215, 1752, 1995
SstI GAGCTC 1 cut(s) 1875
StuI AGGCCT 1 cut(s) 1999
StyD4I CCNGG 3 cut(s) 461, 539, 1826
StyI CCWWGG 4 cut(s) 668, 912, 1178, 1710
TaaI ACNGT 5 cut(s) 47, 54, 536, 620, 2172
TaiI ACGT 4 cut(s) 294, 660, 1505, 1737
TatI WGTACW 4 cut(s) 772, 938, 1112, 2023
TfiI GAWTC 3 cut(s) 20, 1619, 1760
TscAI CASTG 3 cut(s) 119, 186, 2049
TseFI GTSAC 3 cut(s) 287, 860, 2111
TseI GCWGC 6 cut(s) 127, 417, 1352, 1582, 1901, 2075
Tsp45I GTSAC 3 cut(s) 287, 860, 2111
TspDTI ATGAA 8 cut(s) 567, 936, 1063, 1212, 1267, 1304, 1438, 1848
TspGWI ACGGA 2 cut(s) 1689, 2193
TspRI CASTG 3 cut(s) 119, 186, 2049
Van91I CCANNNNNTGG 2 cut(s) 669, 674
VpaK11BI GGWCC 2 cut(s) 465, 1906
XapI RAATTY 4 cut(s) 191, 392, 1157, 2212
XcmI CCANNNNNNNNNTGG 2 cut(s) 1462, 1717
XmaJI CCTAGG 1 cut(s) 1178
XmiI GTMKAC 3 cut(s) 516, 1440, 1668
XspI CTAG 6 cut(s) 452, 1128, 1179, 1215, 1752, 1995
ZrmI AGTACT 2 cut(s) 1114, 2025
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.