RLG00000017645

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
19426922 .. 19430656
3735 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017645

Sequence Viewer

Length: 1983 bp
ATGTCTCTTGTGGCAACTCTTCGTCTTCACTACTTCTTGAATAATTGCAGTATTATGCACTTGATCATCTCCATCAATTTCCTCCTTATTCCCCTTTGCCATTCACTATCCTTCAATATCAGTCACTTCGATAATTCTGCAAGTAAGATACTCTACGACGGTGATGCAGCGCCTTCTTCCGACGGTTCGGGATTCATTGAACTCAATAGAGATGAAGCTTGTCTTGTTGGCTGGGCGAGATATGCAGAGCCGTTGCACTTGTGGGAGGGGTCGTCACTTGCTGCAGACTTCACTACTGACTTCTCCTTCGTTGTGCACTTTCTTAACAGCAGCGAAATTGGTGATGGGCTTTCCTTCTTCCTCGCTCCGGTCCACTATACAATTCCACCCAACTCCCGCGGTCCTTTGATGGGTTTGTTCAACGCAACCACTCAGATGGCAGTCTCCCAAAACAAGCTTGTGACGGTTGAGTTCGACACTACATCCAATCCCGTCTGGGATCCACCGGTGACGCACATCGGGATCAACGACAGGAGCGTCAAGTCAGTTGTTAATGCCAGCTGGGATCCTGTCAGTGGGAAACCGTGTCATGCACGGATAACGTACAATGCTACCACCAACAACCTCACTGTGTTTTGGACATACGGAGAAAATTTCGAGGCAAATTCTTCCCTTTCCTATCCTATTGACCTGAAAATGTCTCTCCCGGAGTGGGTTAGAATTGGATTTGCATCTTCTACAGGCCTTTTCCATGAGCGGCATGTTATAAGATCATGGGAATTCAGTAGTTCAGAAATAAAGTCCGATGCGAGCCGAAGGAGGATAGTCTTGAGGATTGGGGTCGCTGTAGCAGCAGTAGTTCTTTTCTTGATTTTGGTGCTTTATGTATCCTACCGGTGGGTCGTAGGGAAGCGGATAAAGAGGACCCGTGGAGAAGGAATTGAGTCGAATGACTCCTCCAAGGTTGCATTGTCTCCCATAAATTCAGATCTTCAGATACTAGCCTTGCCAAGACAATTTACTTATCAAGAACTAGTTGCAGCCACCAATGGCTTCGCAAACAACAGAAGGCTAGGCCAAGGAGGATCCGGACAAGTTTATAAAGGGATCATACAAGATCTAGGCTGTGCAGTTGCCGTGAAGAGAATCTTTGCACAATCCGAAAAGTATGAGAAAATCTTCGTCAACGAAGTCAAGATCATAAGCCGAATAATACATAAAAACTTGGTGCAGTTTATTGGATGGTGCCATGAGCAAGGCGAATGCTTACTTGTATATGCATACATGTCTAACAGTAGCCTTGACACGCATCTATTTGGCTCCAGGGCAACCTTGAAGTGGGGCTTTCGGTATAAGATAGCTTTAGGCTTGGCCTCGGCGCTTCATTATCTACACGAGGAAGCAGAGCAGTGTGTCCTTCATAGGGATATCAAATCAGCTAATGTTCTGTTGGACAACGATTTTAGCACTAAACTTGGTGATTTTGGGATTGCTAAGCTTGTGGATTCGCGGTTAAGGTCTCAGACTACAGGGGTAGTCGGGACTTTTGGGTACATAGCTCCAGAATACGCTAGTGAAGGGAGGGCAAGCAAAGAATCAGATATTTTTAGCTTCGGAGTTGTGGCCTTGGAAATTGCTTGTGGAAGGACGACTTACCACGACGGAGAATTCCACTCATCGCTTTATAGGTGGGTTTGGCATTTGTACCTTGCAGGAAACTTACTGGATGCAGCTGATGAGAGATTGGGTGTAGATTTTGATCAAAATGAAATGGAGTGCTTGTTAATTGTTGGATTATGGTGCACTCATCCCAACTGCAAAGAAAGGCCAAAAGCAGGACAAGTGATTAAGGTTCTCCAGCTTGAAGCACCATTGCCAAATCTTCCACATAGCATGCCTGATTACCCAATGCCTCAACCTCAGCAACAAGATCAATCCGGTGGATTGACAGGTTCAATCCCACTGCCAGACTCTATTCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

661

Amino Acids

73.45

Weight (kDa)

6.22

Isoelectric Point (pI)

49.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 35 - 272 1.1e-61 Legume lectin domain
Pkinase PF00069 353 - 561 1.3e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 355 - 554 3.4e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 767, 1101
AasI GACNNNNNNGTC 1 cut(s) 536
AccB1I GGYRCC 1 cut(s) 1245
AccBSI CCGCTC 1 cut(s) 757
AccII CGCG 2 cut(s) 399, 1510
AccIII TCCGGA 1 cut(s) 1088
AciI CCGC 5 cut(s) 397, 399, 757, 913, 1510
AclWI GGATC 8 cut(s) 494, 507, 530, 560, 573, 1080, 1093, 1115
AcsI RAATTY 5 cut(s) 652, 664, 779, 982, 1667
AcuI CTGAAG 1 cut(s) 977
AfaI GTAC 3 cut(s) 605, 1553, 1706
AfiI CCNNNNNNNGG 8 cut(s) 367, 410, 575, 712, 897, 1338, 1423, 1835
AflIII ACRYGT 1 cut(s) 1284
AgeI ACCGGT 2 cut(s) 505, 894
AgsI TTSAA 7 cut(s) 40, 115, 200, 421, 1336, 1865, 1956
AhlI ACTAGT 1 cut(s) 1033
AjnI CCWGG 1 cut(s) 1322
Alw21I GWGCWC 2 cut(s) 318, 1805
Alw26I GTCTC 5 cut(s) 9, 448, 705, 978, 1524
Alw44I GTGCAC 2 cut(s) 314, 1801
AlwI GGATC 8 cut(s) 494, 507, 530, 560, 573, 1080, 1093, 1115
Aor13HI TCCGGA 1 cut(s) 1088
AoxI GGCC 5 cut(s) 742, 1075, 1371, 1623, 1826
ApaLI GTGCAC 2 cut(s) 314, 1801
ApeKI GCWGC 6 cut(s) 167, 281, 330, 851, 1040, 1730
ApoI RAATTY 5 cut(s) 652, 664, 779, 982, 1667
ArsI GACNNNNNNTTYG 2 cut(s) 290, 322
AsiGI ACCGGT 2 cut(s) 505, 894
Asp700I GAANNNNTTC 1 cut(s) 1178
AspLEI GCGC 2 cut(s) 172, 1381
AspS9I GGNCC 3 cut(s) 370, 401, 924
AsuC2I CCSGG 1 cut(s) 707
AsuHPI GGTGA 4 cut(s) 173, 353, 520, 1490
AvaII GGWCC 3 cut(s) 370, 401, 924
BaeGI GKGCMC 2 cut(s) 318, 1805
BamHI GGATCC 3 cut(s) 499, 565, 1085
BanI GGYRCC 1 cut(s) 1245
BauI CACGAG 1 cut(s) 1394
BbsI GAAGAC 1 cut(s) 17
Bbv12I GWGCWC 2 cut(s) 318, 1805
BbvCI CCTCAGC 1 cut(s) 1920
BbvI GCAGC 6 cut(s) 179, 268, 342, 863, 1052, 1742
BccI CCATC 5 cut(s) 80, 338, 403, 430, 1236
BceAI ACGGC 2 cut(s) 235, 1121
BcgI CGANNNNNNTGC 4 cut(s) 119, 146, 153, 180
BciT130I CCWGG 1 cut(s) 1324
BciVI GTATCC 1 cut(s) 898
BclI TGATCA 2 cut(s) 63, 1759
BcnI CCSGG 1 cut(s) 707
BcoDI GTCTC 5 cut(s) 9, 448, 705, 978, 1524
BcuI ACTAGT 1 cut(s) 1033
BfaI CTAG 5 cut(s) 1001, 1034, 1073, 1121, 1572
BfmI CTRYAG 4 cut(s) 282, 738, 846, 1527
BfoI RGCGCY 2 cut(s) 173, 1382
BfuI GTATCC 1 cut(s) 898
BglII AGATCT 2 cut(s) 988, 1117
BisI GCNGC 7 cut(s) 168, 282, 331, 758, 852, 1041, 1731
BlpI GCTNAGC 1 cut(s) 1494
BlsI GCNGC 7 cut(s) 169, 283, 332, 759, 853, 1042, 1732
Bme1390I CCNGG 2 cut(s) 707, 1324
Bme18I GGWCC 3 cut(s) 370, 401, 924
BmgT120I GGNCC 3 cut(s) 370, 401, 924
BmiI GGNNCC 6 cut(s) 501, 567, 926, 1087, 1247, 1321
BmrFI CCNGG 2 cut(s) 707, 1324
BmsI GCATC 5 cut(s) 154, 740, 796, 1318, 1717
BpiI GAAGAC 1 cut(s) 17
BpmI CTGGAG 3 cut(s) 1306, 1545, 1841
Bpu10I CCTNAGC 1 cut(s) 1920
Bpu1102I GCTNAGC 1 cut(s) 1494
BpuEI CTTGAG 1 cut(s) 850
BpuMI CCSGG 1 cut(s) 707
BsaBI GATNNNNATC 2 cut(s) 730, 1758
BsaI GGTCTC 1 cut(s) 1524
BsaJI CCNNGG 7 cut(s) 397, 928, 960, 1078, 1323, 1374, 1626
BsaWI WCCGGW 5 cut(s) 367, 505, 894, 1088, 1937
BsaXI ACNNNNNCTCC 4 cut(s) 257, 287, 1766, 1796
Bsc4I CCNNNNNNNGG 8 cut(s) 367, 410, 575, 712, 897, 1338, 1423, 1835
Bse118I RCCGGY 2 cut(s) 505, 894
Bse1I ACTGG 1 cut(s) 1728
Bse3DI GCAATG 1 cut(s) 1871
Bse8I GATNNNNATC 2 cut(s) 730, 1758
BseAI TCCGGA 1 cut(s) 1088
BseBI CCWGG 1 cut(s) 1324
BseDI CCNNGG 7 cut(s) 397, 928, 960, 1078, 1323, 1374, 1626
BseGI GGATG 4 cut(s) 482, 1247, 1732, 1807
BseJI GATNNNNATC 2 cut(s) 730, 1758
BseLI CCNNNNNNNGG 8 cut(s) 367, 410, 575, 712, 897, 1338, 1423, 1835
BseMI GCAATG 1 cut(s) 1871
BseMII CTCAG 3 cut(s) 446, 1535, 1934
BseNI ACTGG 1 cut(s) 1728
BseRI GAGGAG 1 cut(s) 946
BseSI GKGCMC 2 cut(s) 318, 1805
BseXI GCAGC 6 cut(s) 179, 268, 342, 863, 1052, 1742
BseYI CCCAGC 2 cut(s) 231, 561
BsgI GTGCAG 2 cut(s) 1149, 1250
Bsh1236I CGCG 2 cut(s) 399, 1510
BshFI GGCC 5 cut(s) 744, 1077, 1373, 1625, 1828
BshNI GGYRCC 1 cut(s) 1245
BshTI ACCGGT 2 cut(s) 505, 894
BsiHKAI GWGCWC 2 cut(s) 318, 1805
BsiSI CCGG 6 cut(s) 368, 506, 707, 895, 1089, 1938
BslFI GGGAC 1 cut(s) 1555
BslI CCNNNNNNNGG 8 cut(s) 367, 410, 575, 712, 897, 1338, 1423, 1835
BsmAI GTCTC 5 cut(s) 9, 448, 705, 978, 1524
BsmFI GGGAC 1 cut(s) 1555
BsmI GAATGC 1 cut(s) 1268
BsnI GGCC 5 cut(s) 744, 1077, 1373, 1625, 1828
Bso31I GGTCTC 1 cut(s) 1524
Bsp1286I GDGCHC 2 cut(s) 318, 1805
Bsp13I TCCGGA 1 cut(s) 1088
Bsp1720I GCTNAGC 1 cut(s) 1494
BspACI CCGC 5 cut(s) 397, 399, 757, 913, 1510
BspANI GGCC 5 cut(s) 744, 1077, 1373, 1625, 1828
BspCNI CTCAG 3 cut(s) 445, 1534, 1933
BspEI TCCGGA 1 cut(s) 1088
BspFNI CGCG 2 cut(s) 399, 1510
BspLI GGNNCC 6 cut(s) 501, 567, 926, 1087, 1247, 1321
BspMAI CTGCAG 1 cut(s) 286
BspPI GGATC 8 cut(s) 494, 507, 530, 560, 573, 1080, 1093, 1115
BspT107I GGYRCC 1 cut(s) 1245
BspTNI GGTCTC 1 cut(s) 1524
BsrBI CCGCTC 1 cut(s) 757
BsrDI GCAATG 1 cut(s) 1871
BsrFI RCCGGY 2 cut(s) 505, 894
BsrI ACTGG 1 cut(s) 1728
BssAI RCCGGY 2 cut(s) 505, 894
BssECI CCNNGG 7 cut(s) 397, 928, 960, 1078, 1323, 1374, 1626
BssSI CACGAG 1 cut(s) 1394
BssT1I CCWWGG 3 cut(s) 960, 1078, 1626
Bst2BI CACGAG 1 cut(s) 1394
Bst2UI CCWGG 1 cut(s) 1324
Bst4CI ACNGT 6 cut(s) 161, 185, 466, 585, 631, 1295
Bst6I CTCTTC 2 cut(s) 24, 1136
BstC8I GCNNGC 4 cut(s) 559, 811, 1588, 1895
BstDEI CTNAG 4 cut(s) 432, 1494, 1521, 1920
BstDSI CCRYGG 2 cut(s) 397, 928
BstF5I GGATG 4 cut(s) 482, 1247, 1732, 1807
BstFNI CGCG 2 cut(s) 399, 1510
BstH2I RGCGCY 2 cut(s) 173, 1382
BstHHI GCGC 2 cut(s) 172, 1381
BstMAI GTCTC 5 cut(s) 9, 448, 705, 978, 1524
BstMWI GCNNNNNNNGC 2 cut(s) 242, 851
BstNI CCWGG 1 cut(s) 1324
BstNSI RCATGY 3 cut(s) 764, 1288, 1897
BstSCI CCNGG 2 cut(s) 705, 1322
BstSFI CTRYAG 4 cut(s) 282, 738, 846, 1527
BstSLI GKGCMC 2 cut(s) 318, 1805
BstUI CGCG 2 cut(s) 399, 1510
BstV1I GCAGC 6 cut(s) 179, 268, 342, 863, 1052, 1742
BstV2I GAAGAC 1 cut(s) 17
BstX2I RGATCY 5 cut(s) 499, 565, 988, 1085, 1117
BstXI CCANNNNNNTGG 1 cut(s) 436
BstYI RGATCY 5 cut(s) 499, 565, 988, 1085, 1117
BsuI GTATCC 1 cut(s) 898
BsuRI GGCC 5 cut(s) 744, 1077, 1373, 1625, 1828
BtgI CCRYGG 2 cut(s) 397, 928
BtgZI GCGATG 1 cut(s) 1662
BtsCI GGATG 4 cut(s) 482, 1247, 1732, 1807
BtsI GCAGTG 2 cut(s) 1415, 1961
BtsIMutI CAGTG 4 cut(s) 580, 627, 1415, 1961
Cac8I GCNNGC 4 cut(s) 559, 811, 1588, 1895
CfoI GCGC 2 cut(s) 172, 1381
Cfr10I RCCGGY 2 cut(s) 505, 894
Cfr13I GGNCC 3 cut(s) 370, 401, 924
Cfr42I CCGCGG 1 cut(s) 400
CseI GACGC 2 cut(s) 520, 526
Csp6I GTAC 3 cut(s) 604, 1552, 1705
CspAI ACCGGT 2 cut(s) 505, 894
CviAII CATG 7 cut(s) 590, 752, 761, 774, 1250, 1285, 1894
CviQI GTAC 3 cut(s) 604, 1552, 1705
DdeI CTNAG 4 cut(s) 432, 1494, 1521, 1920
DrdI GACNNNNNNGTC 1 cut(s) 536
DseDI GACNNNNNNGTC 1 cut(s) 536
Eam1104I CTCTTC 2 cut(s) 24, 1136
EarI CTCTTC 2 cut(s) 24, 1136
Eco130I CCWWGG 3 cut(s) 960, 1078, 1626
Eco147I AGGCCT 1 cut(s) 744
Eco31I GGTCTC 1 cut(s) 1524
Eco32I GATATC 1 cut(s) 1429
Eco47I GGWCC 3 cut(s) 370, 401, 924
Eco57I CTGAAG 1 cut(s) 977
EcoO109I RGGNCCY 1 cut(s) 924
EcoRI GAATTC 2 cut(s) 779, 1667
EcoRII CCWGG 1 cut(s) 1322
EcoRV GATATC 1 cut(s) 1429
EcoT14I CCWWGG 3 cut(s) 960, 1078, 1626
EcoT22I ATGCAT 1 cut(s) 1282
ErhI CCWWGG 3 cut(s) 960, 1078, 1626
FaeI CATG 7 cut(s) 593, 755, 764, 777, 1253, 1288, 1897
FalI AAGNNNNNCTT 8 cut(s) 207, 239, 1133, 1165, 1328, 1360, 1636, 1668
FaqI GGGAC 1 cut(s) 1555
FatI CATG 7 cut(s) 589, 751, 760, 773, 1249, 1284, 1893
FauI CCCGC 1 cut(s) 404
FbaI TGATCA 2 cut(s) 63, 1759
Fnu4HI GCNGC 7 cut(s) 168, 282, 331, 758, 852, 1041, 1731
FokI GGATG 4 cut(s) 469, 1254, 1739, 1794
Fsp4HI GCNGC 7 cut(s) 168, 282, 331, 758, 852, 1041, 1731
FspBI CTAG 5 cut(s) 1001, 1034, 1073, 1121, 1572
GlaI GCGC 2 cut(s) 171, 1380
GluI GCNGC 7 cut(s) 168, 282, 331, 758, 852, 1041, 1731
GsaI CCCAGC 2 cut(s) 235, 565
GsuI CTGGAG 3 cut(s) 1306, 1545, 1841
HaeII RGCGCY 2 cut(s) 173, 1382
HaeIII GGCC 5 cut(s) 744, 1077, 1373, 1625, 1828
HapII CCGG 6 cut(s) 368, 506, 707, 895, 1089, 1938
HgaI GACGC 2 cut(s) 520, 526
HhaI GCGC 2 cut(s) 172, 1381
Hin1II CATG 7 cut(s) 593, 755, 764, 777, 1253, 1288, 1897
Hin6I GCGC 2 cut(s) 170, 1379
HinP1I GCGC 2 cut(s) 170, 1379
HincII GTYRAC 1 cut(s) 1186
HindII GTYRAC 1 cut(s) 1186
HindIII AAGCTT 3 cut(s) 216, 455, 1496
HinfI GANTC 7 cut(s) 192, 944, 953, 1146, 1505, 1595, 1970
HpaII CCGG 6 cut(s) 368, 506, 707, 895, 1089, 1938
HphI GGTGA 4 cut(s) 173, 353, 520, 1490
Hpy166II GTNNAC 4 cut(s) 316, 373, 1186, 1803
Hpy8I GTNNAC 4 cut(s) 316, 373, 1186, 1803
Hpy99I CGWCG 3 cut(s) 161, 185, 1664
HpyCH4III ACNGT 6 cut(s) 161, 185, 466, 585, 631, 1295
HpyCH4IV ACGT 1 cut(s) 602
HpyF10VI GCNNNNNNNGC 2 cut(s) 242, 851
HpyF3I CTNAG 4 cut(s) 432, 1494, 1521, 1920
HpySE526I ACGT 1 cut(s) 602
Hsp92II CATG 7 cut(s) 593, 755, 764, 777, 1253, 1288, 1897
HspAI GCGC 2 cut(s) 170, 1379
Kpn2I TCCGGA 1 cut(s) 1088
Ksp22I TGATCA 2 cut(s) 63, 1759
KspI CCGCGG 1 cut(s) 400
LmnI GCTCC 4 cut(s) 370, 534, 1325, 1564
Lsp1109I GCAGC 6 cut(s) 179, 268, 342, 863, 1052, 1742
LweI GCATC 5 cut(s) 154, 740, 796, 1318, 1717
MaeI CTAG 5 cut(s) 1001, 1034, 1073, 1121, 1572
MaeII ACGT 1 cut(s) 602
MaeIII GTNAC 4 cut(s) 122, 273, 460, 508
MbiI CCGCTC 1 cut(s) 757
MflI RGATCY 5 cut(s) 499, 565, 988, 1085, 1117
MhlI GDGCHC 2 cut(s) 318, 1805
MlyI GAGTC 3 cut(s) 947, 953, 1964
MmeI TCCRAC 3 cut(s) 204, 1431, 1771
Mph1103I ATGCAT 1 cut(s) 1282
MroI TCCGGA 1 cut(s) 1088
MroXI GAANNNNTTC 1 cut(s) 1178
MseI TTAA 5 cut(s) 324, 552, 1514, 1784, 1848
MslI CAYNNNNRTG 1 cut(s) 434
MspA1I CMGCKG 3 cut(s) 399, 561, 1733
MspI CCGG 6 cut(s) 368, 506, 707, 895, 1089, 1938
MspR9I CCNGG 2 cut(s) 707, 1324
Mva1269I GAATGC 1 cut(s) 1268
MvaI CCWGG 1 cut(s) 1324
MvnI CGCG 2 cut(s) 399, 1510
MwoI GCNNNNNNNGC 2 cut(s) 242, 851
NciI CCSGG 1 cut(s) 707
NlaIII CATG 7 cut(s) 593, 755, 764, 777, 1253, 1288, 1897
NlaIV GGNNCC 6 cut(s) 501, 567, 926, 1087, 1247, 1321
NmeAIII GCCGAG 1 cut(s) 1355
NmuCI GTSAC 4 cut(s) 122, 273, 460, 508
NsiI ATGCAT 1 cut(s) 1282
NspI RCATGY 3 cut(s) 764, 1288, 1897
PaeI GCATGC 1 cut(s) 1897
PceI AGGCCT 1 cut(s) 744
PciI ACATGT 1 cut(s) 1284
PcsI WCGNNNNNNNCGW 2 cut(s) 525, 534
PctI GAATGC 1 cut(s) 1268
PdmI GAANNNNTTC 1 cut(s) 1178
PfeI GAWTC 4 cut(s) 192, 1146, 1505, 1595
PfoI TCCNGGA 1 cut(s) 705
PinAI ACCGGT 2 cut(s) 505, 894
PkrI GCNGC 7 cut(s) 169, 283, 332, 759, 853, 1042, 1732
PleI GAGTC 3 cut(s) 947, 952, 1964
PpsI GAGTC 3 cut(s) 947, 952, 1964
PpuMI RGGWCCY 1 cut(s) 924
PscI ACATGT 1 cut(s) 1284
PsiI TTATAA 2 cut(s) 767, 1101
Psp5II RGGWCCY 1 cut(s) 924
Psp6I CCWGG 1 cut(s) 1322
PspFI CCCAGC 2 cut(s) 231, 561
PspGI CCWGG 1 cut(s) 1322
PspN4I GGNNCC 6 cut(s) 501, 567, 926, 1087, 1247, 1321
PspPI GGNCC 3 cut(s) 370, 401, 924
PspPPI RGGWCCY 1 cut(s) 924
PstI CTGCAG 1 cut(s) 286
PsuI RGATCY 5 cut(s) 499, 565, 988, 1085, 1117
PvuII CAGCTG 2 cut(s) 561, 1733
RsaI GTAC 3 cut(s) 605, 1553, 1706
RsaNI GTAC 3 cut(s) 604, 1552, 1705
RseI CAYNNNNRTG 1 cut(s) 434
SacII CCGCGG 1 cut(s) 400
SaqAI TTAA 5 cut(s) 324, 552, 1514, 1784, 1848
SatI GCNGC 7 cut(s) 168, 282, 331, 758, 852, 1041, 1731
Sau96I GGNCC 3 cut(s) 370, 401, 924
SchI GAGTC 3 cut(s) 947, 953, 1964
ScrFI CCNGG 2 cut(s) 707, 1324
SduI GDGCHC 2 cut(s) 318, 1805
SfaNI GCATC 5 cut(s) 154, 740, 796, 1318, 1717
SfcI CTRYAG 4 cut(s) 282, 738, 846, 1527
Sfr303I CCGCGG 1 cut(s) 400
SgrAI CRCCGGYG 1 cut(s) 505
SgrBI CCGCGG 1 cut(s) 400
SinI GGWCC 3 cut(s) 370, 401, 924
SmiMI CAYNNNNRTG 1 cut(s) 434
SmlI CTYRAG 1 cut(s) 829
SmoI CTYRAG 1 cut(s) 829
SpeI ACTAGT 1 cut(s) 1033
SphI GCATGC 1 cut(s) 1897
SseBI AGGCCT 1 cut(s) 744
SsiI CCGC 5 cut(s) 397, 399, 757, 913, 1510
SspMI CTAG 5 cut(s) 1001, 1034, 1073, 1121, 1572
StuI AGGCCT 1 cut(s) 744
StyD4I CCNGG 2 cut(s) 705, 1322
StyI CCWWGG 3 cut(s) 960, 1078, 1626
TaaI ACNGT 6 cut(s) 161, 185, 466, 585, 631, 1295
TaiI ACGT 1 cut(s) 605
TaqI TCGA 4 cut(s) 129, 474, 657, 947
TauI GCSGC 1 cut(s) 760
TfiI GAWTC 4 cut(s) 192, 1146, 1505, 1595
Tru1I TTAA 5 cut(s) 324, 552, 1514, 1784, 1848
Tru9I TTAA 5 cut(s) 324, 552, 1514, 1784, 1848
TscAI CASTG 4 cut(s) 580, 634, 1415, 1968
TseFI GTSAC 4 cut(s) 122, 273, 460, 508
TseI GCWGC 6 cut(s) 167, 281, 330, 851, 1040, 1730
Tsp45I GTSAC 4 cut(s) 122, 273, 460, 508
TspDTI ATGAA 6 cut(s) 184, 228, 1373, 1409, 1782, 1967
TspGWI ACGGA 3 cut(s) 610, 660, 1677
TspRI CASTG 4 cut(s) 580, 634, 1415, 1968
VneI GTGCAC 2 cut(s) 314, 1801
VpaK11BI GGWCC 3 cut(s) 370, 401, 924
XapI RAATTY 5 cut(s) 652, 664, 779, 982, 1667
XceI RCATGY 3 cut(s) 764, 1288, 1897
XmnI GAANNNNTTC 1 cut(s) 1178
XspI CTAG 5 cut(s) 1001, 1034, 1073, 1121, 1572
Zsp2I ATGCAT 1 cut(s) 1282
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.