RLG00000017646

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
19467186 .. 19470542
3357 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017646

Sequence Viewer

Length: 2286 bp
ATGGGATCCACCTGGCCCACACATTTGGATCAACAACCAGACCATCTCCTCAGTGTTTATGCCAGTTGGGATCCTATCCTCCACAGTGGGAAAGAGGGCCAAGCACGTATTACTTACAATGCTACCACCAACAACCTCAGTGTATTTTGGAACTACGACAGAGCCCCAACTCTGAACTTTAATAGTTATGTGCCAAACTCTTCCCTTTCCATCCTTATTGACCTCAGAAATGCTCTACCCAAGTGGGTTACAATTGGATTTTCATCTGCTACAGGCCTTTTCTCGGAGTTCCATGTTATAAGTTCATGGGAATTCAGATCGGATTTGGATACTGAAGACAACATAAGAAATAAAAAGAAGAAGAGCATAGTCTTAAAGACTAGGGTCGTTGCAGTAGTTCTTTTCTTCATTTTGATGCTCGGTGTGGCCATATGTTGTATCAATCACTTCGATAAAACTGCAAGTAAGATACGCTACGCCGGTGATGCAGCGCCTTCTTCCGACGGTTCGGGATTCATTGAACTCAATAGACTAGATATTTATCGAATTGGCCGGGCTACCTATGCAGAGCCGTTGCACTTGTGGGAGGGGTCGTCACCAGCTGCTGACTTCACTACTAACTTCTCCTTCGTTGTAACCATTCTTAACAATAGCTCATATGGTGATGGGATTTCCTTCTTCCTCTCTCCGGTCAACTATTCAATTCCACCCAACTCCGCCGCTCCCTTAATGGGCTTATTCAGCAGCAGCACTTGGGCAGCGCCAGTAGTGACGGTTGAGTTCGACACTAATGATTTCAGTCGCGAGTGGGATCCACCGGGGCCGCACGTCGGGATCAACAACAGGAGCGTCAAGTCAGCTGTTAATGCCGGCTGGGATCCTCTCCTCCACAGTGGGAAAGAGTGTCGTGCACGGATAACATACAATGCTACCACCAACAACCTCACCGTGTTTTGGACATACGAAGAAAATTTCGAGGCAAATTCTTCCCTTTCCCTTACTATTGACCTGAGGAAGTCTCTCCCAGAGTGGGTTACAATTGGATTTTCAGCTTCTACAGGCCTTGCCTATGAGCGGCATGTTATAAGTTCATGGGAATTCACTAGTTCAGAATTAAAGTCCGATGCAAGCCGAAGGAGGATAGTCTTGAAGATTGTCGCCGCAGCAGTAGTTGTTTTCTTGATTTTGATGCTTTATGTGGCCTACAGGTGGGTCGTACGGAAGCGGATAAAGAGCAATTGTGGAGATGGAAATGGGCTGAATGATTCCTCCAGTACTGCATTGTCCTCCATAAATCCAAGACAATTTACTTATCAAGAACTGGTTGCAGCCACCAATGGCTTCGCAAACGATAGAAGGCTAGGCCAGGGAGGATCAGGACAAGTTTGTAAAGGGATCATACAAGATCTAGGCTGTGCAGTTGCTGTGAAGAGAATCTTTGCACAATCCGACAAGCACTATGAGAAGATCTTCATCAACGAAGTCAAAATCATAAGCAGCATTATACATAAAAACTTGGTGCGCTTCATTGGATGGTGTCATGCGCAGGGCGAATGCATGATTGTTTATGAATACATGCCTAACAGTAGCCTTGACACGCATCTATTTGGCTCTAGAGCAACCTTGCCATGGGAGTTTAGGTATAGAATAGCTTTAGGCTTGGCCTCAGCGCTTCATTATCTACACGAGGATGCAGAGCAGTGTGTCATTCATAGGGATATCAAATCAGCTAATGTTCTGTTGGACAACGATTTCAACACTAAACTTGGTGATTTTGGGATTGCTAAGCTCGTGGATCCGCTGCTAAGGTCTCAGACTACAGGGGTAGTCGGGACTTTTGGATACATGGCTCCAGAATATGTTATTGAAGGGAAGGCGAGCAAAGAATCAGACATGTTTAGCTTCGGAGTTGTGGCCTTGGAAATTGCTTGTGGAAGGAGGACCTACTATGATGGAGAATTTCACTTACCGCTTTATAGATGGGTTTGGCATTTGTACCTTGCAGAAAATTTACTGGATGCAGCTGATGAGAGATTGGGTGTAGATTTTGATCAAAATGAAATGGAGTGCTTGTTAATTGTTGGATTATGGTGCACTCACCCCAACAGCAAAGAAAGGCCAAAACCAGGACAAGTGATTAAGTTTCTCCAGCTTGAAGCACCATTGCCAAATCTTCCACATATCATGCCTGATTACCCGATGCCTCAACCTCAGCAACAAGTTCAATCCAGTTCCTCTCAGCCTCAGTTGTCACTAACTTCTAGCTTCAACACTGTAGGTCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

762

Amino Acids

85.09

Weight (kDa)

6.3

Isoelectric Point (pI)

41.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 21 - 120 2.2e-16 Legume lectin domain
Lectin_legB PF00139 147 - 377 7.9e-60 Legume lectin domain
Lectin_L-type_dom PF18483 201 - 362 1.6e-06 Legume lectin beta-barrel domain
Pkinase PF00069 449 - 650 1.7e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 451 - 650 1e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 299, 1085
Acc16I TGCGCA 1 cut(s) 1545
AccBSI CCGCTC 2 cut(s) 722, 1075
AccII CGCG 1 cut(s) 804
AciI CCGC 8 cut(s) 717, 720, 824, 1075, 1161, 1225, 1799, 1970
AcoI YGGCCR 2 cut(s) 426, 550
AcsI RAATTY 6 cut(s) 311, 970, 982, 1097, 1958, 2008
AcuI CTGAAG 1 cut(s) 354
AfaI GTAC 3 cut(s) 1218, 1276, 1997
AfeI AGCGCT 1 cut(s) 1671
AflIII ACRYGT 1 cut(s) 1893
AgsI TTSAA 8 cut(s) 521, 702, 1150, 1756, 1868, 2156, 2225, 2269
AhlI ACTAGT 1 cut(s) 1103
AjiI CACGTC 1 cut(s) 829
AjnI CCWGG 3 cut(s) 11, 1365, 2125
Alw21I GWGCWC 2 cut(s) 913, 2096
Alw26I GTCTC 2 cut(s) 1023, 1815
Alw44I GTGCAC 2 cut(s) 909, 2092
AlwNI CAGNNNCTG 2 cut(s) 605, 1424
Aor51HI AGCGCT 1 cut(s) 1671
ApaLI GTGCAC 2 cut(s) 909, 2092
ApoI RAATTY 6 cut(s) 311, 970, 982, 1097, 1958, 2008
Asp700I GAANNNNTTC 1 cut(s) 1469
AspLEI GCGC 5 cut(s) 493, 763, 1524, 1546, 1672
AspS9I GGNCC 4 cut(s) 15, 97, 821, 1941
AsuC2I CCSGG 2 cut(s) 554, 819
AsuHPI GGTGA 6 cut(s) 494, 588, 674, 937, 1781, 2090
AvaII GGWCC 1 cut(s) 1941
AxyI CCTNAGG 1 cut(s) 1010
BaeGI GKGCMC 2 cut(s) 913, 2096
BalI TGGCCA 1 cut(s) 428
BamHI GGATCC 5 cut(s) 5, 70, 811, 877, 1795
BanII GRGCYC 1 cut(s) 166
BauI CACGAG 2 cut(s) 1685, 1790
BbsI GAAGAC 1 cut(s) 342
Bbv12I GWGCWC 2 cut(s) 913, 2096
BbvCI CCTCAGC 2 cut(s) 1666, 2211
BccI CCATC 7 cut(s) 51, 218, 659, 1241, 1527, 1946, 1974
BceAI ACGGC 1 cut(s) 556
BcgI CGANNNNNNTGC 2 cut(s) 440, 474
BciT130I CCWGG 3 cut(s) 13, 1367, 2127
BciVI GTATCC 2 cut(s) 322, 1835
BclI TGATCA 1 cut(s) 2050
BcnI CCSGG 2 cut(s) 554, 819
BcoDI GTCTC 2 cut(s) 1023, 1815
BcuI ACTAGT 1 cut(s) 1103
BfaI CTAG 7 cut(s) 381, 533, 1104, 1361, 1409, 1614, 2262
BfmI CTRYAG 5 cut(s) 270, 1056, 1204, 1818, 2274
BfoI RGCGCY 3 cut(s) 494, 764, 1673
BfuI GTATCC 2 cut(s) 322, 1835
BglII AGATCT 2 cut(s) 1405, 1467
BlpI GCTNAGC 1 cut(s) 1785
BmcAI AGTACT 1 cut(s) 1276
Bme1390I CCNGG 5 cut(s) 13, 554, 819, 1367, 2127
Bme18I GGWCC 1 cut(s) 1941
BmgBI CACGTC 1 cut(s) 829
BmgT120I GGNCC 4 cut(s) 15, 97, 821, 1941
BmiI GGNNCC 7 cut(s) 7, 72, 813, 822, 879, 1797, 1851
BmrFI CCNGG 5 cut(s) 13, 554, 819, 1367, 2127
BmsI GCATC 8 cut(s) 405, 475, 1114, 1179, 1609, 1681, 2008, 2190
BoxI GACNNNNGTC 1 cut(s) 383
BpiI GAAGAC 1 cut(s) 342
BplI GAGNNNNNCTC 2 cut(s) 1003, 1035
BpmI CTGGAG 3 cut(s) 1255, 1836, 2132
Bpu10I CCTNAGC 3 cut(s) 1666, 1805, 2211
Bpu1102I GCTNAGC 1 cut(s) 1785
BpuMI CCSGG 2 cut(s) 554, 819
BsaAI YACGTR 1 cut(s) 107
BsaBI GATNNNNATC 4 cut(s) 262, 540, 1472, 2049
BsaI GGTCTC 1 cut(s) 1815
BsaJI CCNNGG 4 cut(s) 818, 1366, 1628, 1917
BsaWI WCCGGW 1 cut(s) 688
BsaXI ACNNNNNCTCC 6 cut(s) 578, 608, 1625, 1655, 2057, 2087
Bse118I RCCGGY 2 cut(s) 479, 869
Bse1I ACTGG 6 cut(s) 63, 764, 1272, 1326, 2019, 2229
Bse21I CCTNAGG 1 cut(s) 1010
Bse3DI GCAATG 1 cut(s) 2162
Bse8I GATNNNNATC 4 cut(s) 262, 540, 1472, 2049
BseBI CCWGG 3 cut(s) 13, 1367, 2127
BseDI CCNNGG 4 cut(s) 818, 1366, 1628, 1917
BseGI GGATG 4 cut(s) 210, 1538, 1696, 2023
BseJI GATNNNNATC 4 cut(s) 262, 540, 1472, 2049
BseMI GCAATG 1 cut(s) 2162
BseMII CTCAG 9 cut(s) 64, 151, 238, 1001, 1680, 1826, 2225, 2252, 2258
BseNI ACTGG 6 cut(s) 63, 764, 1272, 1326, 2019, 2229
BseRI GAGGAG 2 cut(s) 38, 875
BseSI GKGCMC 2 cut(s) 913, 2096
BseYI CCCAGC 1 cut(s) 873
BsgI GTGCAG 1 cut(s) 1437
Bsh1236I CGCG 1 cut(s) 804
BsiHKAI GWGCWC 2 cut(s) 913, 2096
BsiSI CCGG 5 cut(s) 480, 553, 689, 818, 870
BsiWI CGTACG 1 cut(s) 1216
BslFI GGGAC 1 cut(s) 1846
BsmAI GTCTC 2 cut(s) 1023, 1815
BsmFI GGGAC 1 cut(s) 1846
BsmI GAATGC 1 cut(s) 1559
Bso31I GGTCTC 1 cut(s) 1815
Bsp1286I GDGCHC 3 cut(s) 166, 913, 2096
Bsp1720I GCTNAGC 1 cut(s) 1785
Bsp19I CCATGG 1 cut(s) 1628
Bsp68I TCGCGA 1 cut(s) 804
BspACI CCGC 8 cut(s) 717, 720, 824, 1075, 1161, 1225, 1799, 1970
BspCNI CTCAG 9 cut(s) 63, 150, 237, 1002, 1679, 1825, 2224, 2251, 2257
BspFNI CGCG 1 cut(s) 804
BspLI GGNNCC 7 cut(s) 7, 72, 813, 822, 879, 1797, 1851
BspQI GCTCTTC 1 cut(s) 356
BspTNI GGTCTC 1 cut(s) 1815
BsrBI CCGCTC 2 cut(s) 722, 1075
BsrDI GCAATG 1 cut(s) 2162
BsrFI RCCGGY 2 cut(s) 479, 869
BsrI ACTGG 6 cut(s) 63, 764, 1272, 1326, 2019, 2229
BssAI RCCGGY 2 cut(s) 479, 869
BssECI CCNNGG 4 cut(s) 818, 1366, 1628, 1917
BssSI CACGAG 2 cut(s) 1685, 1790
BssT1I CCWWGG 2 cut(s) 1628, 1917
Bst2BI CACGAG 2 cut(s) 1685, 1790
Bst2UI CCWGG 3 cut(s) 13, 1367, 2127
Bst4CI ACNGT 7 cut(s) 86, 506, 775, 893, 949, 1586, 2275
Bst6I CTCTTC 3 cut(s) 205, 356, 1424
BstBAI YACGTR 1 cut(s) 107
BstC8I GCNNGC 3 cut(s) 871, 1129, 1879
BstDSI CCRYGG 1 cut(s) 1628
BstF5I GGATG 4 cut(s) 210, 1538, 1696, 2023
BstFNI CGCG 1 cut(s) 804
BstH2I RGCGCY 3 cut(s) 494, 764, 1673
BstHHI GCGC 5 cut(s) 493, 763, 1524, 1546, 1672
BstMAI GTCTC 2 cut(s) 1023, 1815
BstMWI GCNNNNNNNGC 4 cut(s) 485, 563, 741, 866
BstNI CCWGG 3 cut(s) 13, 1367, 2127
BstNSI RCATGY 3 cut(s) 1082, 1579, 1897
BstPAI GACNNNNGTC 1 cut(s) 383
BstSCI CCNGG 5 cut(s) 11, 552, 817, 1365, 2125
BstSFI CTRYAG 5 cut(s) 270, 1056, 1204, 1818, 2274
BstSLI GKGCMC 2 cut(s) 913, 2096
BstUI CGCG 1 cut(s) 804
BstV2I GAAGAC 1 cut(s) 342
BstX2I RGATCY 7 cut(s) 5, 70, 811, 877, 1405, 1467, 1795
BstXI CCANNNNNNTGG 1 cut(s) 25
BstYI RGATCY 7 cut(s) 5, 70, 811, 877, 1405, 1467, 1795
Bsu36I CCTNAGG 1 cut(s) 1010
BsuI GTATCC 2 cut(s) 322, 1835
BtgI CCRYGG 1 cut(s) 1628
BtrI CACGTC 1 cut(s) 829
BtsCI GGATG 4 cut(s) 210, 1538, 1696, 2023
BtsI GCAGTG 1 cut(s) 1706
BtsIMutI CAGTG 6 cut(s) 58, 91, 145, 898, 1706, 2271
BtuMI TCGCGA 1 cut(s) 804
Cac8I GCNNGC 3 cut(s) 871, 1129, 1879
CaiI CAGNNNCTG 2 cut(s) 605, 1424
CfoI GCGC 5 cut(s) 493, 763, 1524, 1546, 1672
Cfr10I RCCGGY 2 cut(s) 479, 869
Cfr13I GGNCC 4 cut(s) 15, 97, 821, 1941
CseI GACGC 1 cut(s) 838
Csp6I GTAC 3 cut(s) 1217, 1275, 1996
CviQI GTAC 3 cut(s) 1217, 1275, 1996
EaeI YGGCCR 2 cut(s) 426, 550
Eam1104I CTCTTC 3 cut(s) 205, 356, 1424
EarI CTCTTC 3 cut(s) 205, 356, 1424
EciI GGCGGA 1 cut(s) 706
Eco130I CCWWGG 2 cut(s) 1628, 1917
Eco147I AGGCCT 2 cut(s) 276, 1062
Eco24I GRGCYC 1 cut(s) 166
Eco31I GGTCTC 1 cut(s) 1815
Eco32I GATATC 1 cut(s) 1720
Eco47I GGWCC 1 cut(s) 1941
Eco47III AGCGCT 1 cut(s) 1671
Eco57I CTGAAG 1 cut(s) 354
Eco81I CCTNAGG 1 cut(s) 1010
EcoO109I RGGNCCY 1 cut(s) 1941
EcoRI GAATTC 2 cut(s) 311, 1097
EcoRII CCWGG 3 cut(s) 11, 1365, 2125
EcoRV GATATC 1 cut(s) 1720
EcoT14I CCWWGG 2 cut(s) 1628, 1917
EcoT22I ATGCAT 1 cut(s) 1559
EcoT38I GRGCYC 1 cut(s) 166
ErhI CCWWGG 2 cut(s) 1628, 1917
FalI AAGNNNNNCTT 2 cut(s) 1421, 1453
FaqI GGGAC 1 cut(s) 1846
FauNDI CATATG 2 cut(s) 431, 658
FbaI TGATCA 1 cut(s) 2050
FokI GGATG 4 cut(s) 197, 1545, 1703, 2030
FriOI GRGCYC 1 cut(s) 166
FspBI CTAG 7 cut(s) 381, 533, 1104, 1361, 1409, 1614, 2262
FspI TGCGCA 1 cut(s) 1545
GlaI GCGC 5 cut(s) 492, 762, 1523, 1545, 1671
GsaI CCCAGC 1 cut(s) 877
GsuI CTGGAG 3 cut(s) 1255, 1836, 2132
HaeII RGCGCY 3 cut(s) 494, 764, 1673
HapII CCGG 5 cut(s) 480, 553, 689, 818, 870
HgaI GACGC 1 cut(s) 838
HhaI GCGC 5 cut(s) 493, 763, 1524, 1546, 1672
Hin6I GCGC 5 cut(s) 491, 761, 1522, 1544, 1670
HinP1I GCGC 5 cut(s) 491, 761, 1522, 1544, 1670
HincII GTYRAC 1 cut(s) 694
HindII GTYRAC 1 cut(s) 694
HinfI GANTC 4 cut(s) 513, 1265, 1434, 1886
HpaII CCGG 5 cut(s) 480, 553, 689, 818, 870
HphI GGTGA 6 cut(s) 494, 588, 674, 937, 1781, 2090
Hpy166II GTNNAC 3 cut(s) 694, 911, 2094
Hpy8I GTNNAC 3 cut(s) 694, 911, 2094
Hpy99I CGWCG 2 cut(s) 506, 833
HpyAV CCTTC 8 cut(s) 504, 637, 685, 1128, 1350, 1862, 1867, 1929
HpyCH4III ACNGT 7 cut(s) 86, 506, 775, 893, 949, 1586, 2275
HpyCH4IV ACGT 2 cut(s) 106, 828
HpyF10VI GCNNNNNNNGC 4 cut(s) 485, 563, 741, 866
HpySE526I ACGT 2 cut(s) 106, 828
HspAI GCGC 5 cut(s) 491, 761, 1522, 1544, 1670
KroI GCCGGC 1 cut(s) 869
KroNI GCCGGC 1 cut(s) 871
Ksp22I TGATCA 1 cut(s) 2050
LguI GCTCTTC 1 cut(s) 356
LmnI GCTCC 3 cut(s) 727, 846, 1855
LweI GCATC 8 cut(s) 405, 475, 1114, 1179, 1609, 1681, 2008, 2190
MaeI CTAG 7 cut(s) 381, 533, 1104, 1361, 1409, 1614, 2262
MaeII ACGT 2 cut(s) 106, 828
MaeIII GTNAC 6 cut(s) 247, 594, 634, 769, 1033, 2250
MbiI CCGCTC 2 cut(s) 722, 1075
MfeI CAATTG 3 cut(s) 252, 1038, 1237
MflI RGATCY 7 cut(s) 5, 70, 811, 877, 1405, 1467, 1795
MhlI GDGCHC 3 cut(s) 166, 913, 2096
MlsI TGGCCA 1 cut(s) 428
MluNI TGGCCA 1 cut(s) 428
MmeI TCCRAC 4 cut(s) 525, 1473, 1722, 2062
Mox20I TGGCCA 1 cut(s) 428
Mph1103I ATGCAT 1 cut(s) 1559
MroNI GCCGGC 1 cut(s) 869
MroXI GAANNNNTTC 1 cut(s) 1469
MscI TGGCCA 1 cut(s) 428
MseI TTAA 9 cut(s) 180, 374, 645, 728, 864, 1115, 2075, 2139, 2284
MslI CAYNNNNRTG 2 cut(s) 413, 1689
Msp20I TGGCCA 1 cut(s) 428
MspA1I CMGCKG 4 cut(s) 602, 860, 1801, 2024
MspI CCGG 5 cut(s) 480, 553, 689, 818, 870
MspR9I CCNGG 5 cut(s) 13, 554, 819, 1367, 2127
MunI CAATTG 3 cut(s) 252, 1038, 1237
Mva1269I GAATGC 1 cut(s) 1559
MvaI CCWGG 3 cut(s) 13, 1367, 2127
MvnI CGCG 1 cut(s) 804
MwoI GCNNNNNNNGC 4 cut(s) 485, 563, 741, 866
NaeI GCCGGC 1 cut(s) 871
NciI CCSGG 2 cut(s) 554, 819
NcoI CCATGG 1 cut(s) 1628
NdeI CATATG 2 cut(s) 431, 658
NgoMIV GCCGGC 1 cut(s) 869
NlaIV GGNNCC 7 cut(s) 7, 72, 813, 822, 879, 1797, 1851
NmuCI GTSAC 3 cut(s) 594, 769, 2250
NruI TCGCGA 1 cut(s) 804
NsbI TGCGCA 1 cut(s) 1545
NsiI ATGCAT 1 cut(s) 1559
NspI RCATGY 3 cut(s) 1082, 1579, 1897
PceI AGGCCT 2 cut(s) 276, 1062
PciI ACATGT 1 cut(s) 1893
PciSI GCTCTTC 1 cut(s) 356
PctI GAATGC 1 cut(s) 1559
PdiI GCCGGC 1 cut(s) 871
PdmI GAANNNNTTC 1 cut(s) 1469
PfeI GAWTC 4 cut(s) 513, 1265, 1434, 1886
Pfl23II CGTACG 1 cut(s) 1216
Ppu21I YACGTR 1 cut(s) 107
PpuMI RGGWCCY 1 cut(s) 1941
PscI ACATGT 1 cut(s) 1893
PshAI GACNNNNGTC 1 cut(s) 383
PsiI TTATAA 2 cut(s) 299, 1085
Psp5II RGGWCCY 1 cut(s) 1941
Psp6I CCWGG 3 cut(s) 11, 1365, 2125
PspFI CCCAGC 1 cut(s) 873
PspGI CCWGG 3 cut(s) 11, 1365, 2125
PspLI CGTACG 1 cut(s) 1216
PspN4I GGNNCC 7 cut(s) 7, 72, 813, 822, 879, 1797, 1851
PspPI GGNCC 4 cut(s) 15, 97, 821, 1941
PspPPI RGGWCCY 1 cut(s) 1941
PstNI CAGNNNCTG 2 cut(s) 605, 1424
PsuI RGATCY 7 cut(s) 5, 70, 811, 877, 1405, 1467, 1795
PvuII CAGCTG 3 cut(s) 602, 860, 2024
RruI TCGCGA 1 cut(s) 804
RsaI GTAC 3 cut(s) 1218, 1276, 1997
RsaNI GTAC 3 cut(s) 1217, 1275, 1996
RseI CAYNNNNRTG 2 cut(s) 413, 1689
SapI GCTCTTC 1 cut(s) 356
SaqAI TTAA 9 cut(s) 180, 374, 645, 728, 864, 1115, 2075, 2139, 2284
Sau96I GGNCC 4 cut(s) 15, 97, 821, 1941
ScaI AGTACT 1 cut(s) 1276
ScrFI CCNGG 5 cut(s) 13, 554, 819, 1367, 2127
SduI GDGCHC 3 cut(s) 166, 913, 2096
SfaNI GCATC 8 cut(s) 405, 475, 1114, 1179, 1609, 1681, 2008, 2190
SfcI CTRYAG 5 cut(s) 270, 1056, 1204, 1818, 2274
SgrAI CRCCGGYG 1 cut(s) 479
SinI GGWCC 1 cut(s) 1941
SmiMI CAYNNNNRTG 2 cut(s) 413, 1689
SpeI ACTAGT 1 cut(s) 1103
SseBI AGGCCT 2 cut(s) 276, 1062
SsiI CCGC 8 cut(s) 717, 720, 824, 1075, 1161, 1225, 1799, 1970
SspMI CTAG 7 cut(s) 381, 533, 1104, 1361, 1409, 1614, 2262
StuI AGGCCT 2 cut(s) 276, 1062
StyD4I CCNGG 5 cut(s) 11, 552, 817, 1365, 2125
StyI CCWWGG 2 cut(s) 1628, 1917
TaaI ACNGT 7 cut(s) 86, 506, 775, 893, 949, 1586, 2275
TaiI ACGT 2 cut(s) 109, 831
TaqI TCGA 4 cut(s) 450, 544, 783, 975
TatI WGTACW 1 cut(s) 1274
TauI GCSGC 4 cut(s) 722, 826, 1078, 1163
TfiI GAWTC 4 cut(s) 513, 1265, 1434, 1886
Tru1I TTAA 9 cut(s) 180, 374, 645, 728, 864, 1115, 2075, 2139, 2284
Tru9I TTAA 9 cut(s) 180, 374, 645, 728, 864, 1115, 2075, 2139, 2284
TscAI CASTG 6 cut(s) 58, 91, 145, 898, 1706, 2278
TseFI GTSAC 3 cut(s) 594, 769, 2250
Tsp45I GTSAC 3 cut(s) 594, 769, 2250
TspGWI ACGGA 2 cut(s) 928, 1234
TspRI CASTG 6 cut(s) 58, 91, 145, 898, 1706, 2278
VneI GTGCAC 2 cut(s) 909, 2092
VpaK11BI GGWCC 1 cut(s) 1941
XapI RAATTY 6 cut(s) 311, 970, 982, 1097, 1958, 2008
XbaI TCTAGA 1 cut(s) 1613
XceI RCATGY 3 cut(s) 1082, 1579, 1897
XmnI GAANNNNTTC 1 cut(s) 1469
XspI CTAG 7 cut(s) 381, 533, 1104, 1361, 1409, 1614, 2262
ZrmI AGTACT 1 cut(s) 1276
Zsp2I ATGCAT 1 cut(s) 1559
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.