Rw1G023830

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Reverse (-)
49873456 .. 49875408
1953 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G023830.1

Sequence Viewer

Length: 1953 bp
ATGTCTGAAAGCAGAAGCAGCAGTACGCAAGCAATCTGCTTCTGCAATATTTGCTTCCTAATTATTTTCACCAATTTCTTCTCCCACTTTGCTCATCCACTCTCCTTCAATATAAATCAGTTCGACCAGAGTGCAAATGGAGTTGTCTTTGAAGGTGATGCCCAGTTTTCATCGGGAAGGATTGAGCTCAACCCAGGCACTTATTTCGATGTTGGACATGCTATTTATGCAGAGCCTTTGCACCTATGGGACACTGCTACTGGATCACTGGCAGACTTCACTACTCATTTCACTTTCATGGTCGACTATGGTGATGAAAGGTGGAAATTCAGCGATGGAATTGCCTTTTTCCTTGTTCCTGTTGGCTACGGTATTCCACCCAACTCTGGCGGTGGTGAACTGGGATTATTCAACACCACCACCAATTTTAATGCGAAGATTGTAACCGTAGAGTTCGACTCCTGGGGAAACGAAGACTGGGATCCACATCCACTCCGGCCCCATATTGGGATCAACATCAATGAAATCTCTTCAGTTCAATACGCCGATTGGAATCCCAGTAACATGACCGGGAAGATTGGTAATGCATGGATAACTTATAACGCTACTGCCAACGACCTTACTGTGTTTTGGACATTCGAGCAAAACACAAATCCCGTTTTTCCAGGCAAATCTACTTCTTCCATTACTTACAATGTTGACTTGCGAAAGGTTCTCCCCGAAAGGGTTACAATTGGTTTTTCTGCTTCGGCCGGATTATACCTCGGGCGGCATTTTTTATGTTCATGGGAGTTTAATTCGACTTTGTTGGATAGCGATATTAGTAGAGCCGAAAGCAAGGGAAAGAAGAAAAAGATATTCTTGATACTGGACATTGCCCTACCTGGCTTCATTTTGATGCTTGGTGCAGTCATATGTTGGTTGATGGTATTATGGAATCGGAGAAACAATTACTCCGGCGAAGTCTCTGATCTTGAGAAGCTAGCCTTTCCAAAACGATTTGCGTACCAAGAATTGTTTGTTGCCACCAACGGGTTTGCAGACGATAGAAGGCTAGGCCAAGGAGGGTCGGGGCATGTATATAAAGGACTCATACAAGACCTTGGAGGCTGCATAGTTGCCGTGAAGAGAATCTTTGCAGAACCTGATCAGCATTATAAGAGAGTCTTCATCAATGAAGTCAAAATCATAAGCCGCTTAATCCATCGAAACCTGGTGCAGTTCATTGGGTGGTGTCATGAGCAAGGTGAATGCTTACTTGTTTATGCATATATGCCTAACAACAGCCTTCACACTCATCTATTTGGCACCAGAACAACCCTGCAATGGCAAAACAGGTACAAGATAGCTTTGGGGTTGGCCTCAGCAATTCACTATCTGCATGAAGAAGCAGAGCAATGTGTTCTTCATAGGGATATCAAATCAGCTAACGTACTGTTGGATGATGACTTCAGCACTAAGCTTGGTGATTTTGGTATTGCTAAGCTCGTGGATTCCCGCTTCAGGTCTCAGACAAGAGAGGTGGCAGGGACTTTTGGATACATGGCCCCTGAATATGCTATTGATGGGAAGGCTAGTAAGGAATCTGACATTTTTAGCTTTGGAGTTGTAGCCTTGGAAATTGCTTGCGGAAGGAAGACTTACCAAGACGGTGAAAATCACGTCCCACTCTTTAGGTGGGTTTGGCAGTTGTTCCTTGCAGGAAATATTCTGGACGCAGCTGATGAAAGATTAGAAATGAATTATGATCGAAATGAAATGAAATGCTTGTTGATTGTTGGACTATGGTGTACTCACCCCAATAACAAGGAAAGACCCAAAGCAGGACAGGTGATGGAGGTTATTCAGCATAAAGCACCATTGCCGGAACTTCCATATGACATGCATAATTATCCAGAACTGCCTCAACCTCAATACCAATCTCAAACTGCATCTTCTTCTAGCTATATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

650

Amino Acids

73.47

Weight (kDa)

5.78

Isoelectric Point (pI)

44.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 34 - 273 2.4e-62 Legume lectin domain
Lectin_L-type_dom PF18483 51 - 258 7e-07 Legume lectin beta-barrel domain
Pkinase PF00069 348 - 613 5.6e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 349 - 554 3.2e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 600, 1158
AccB1I GGYRCC 1 cut(s) 1307
AccI GTMKAC 1 cut(s) 303
AciI CCGC 5 cut(s) 390, 769, 1195, 1498, 1629
AclWI GGATC 4 cut(s) 271, 476, 489, 518
AcoI YGGCCR 1 cut(s) 750
AcsI RAATTY 1 cut(s) 326
AcuI CTGAAG 3 cut(s) 516, 1435, 1486
AfaI GTAC 5 cut(s) 25, 1007, 1340, 1434, 1792
AfiI CCNNNNNNNGG 8 cut(s) 386, 506, 507, 724, 1032, 1326, 1503, 1823
AgsI TTSAA 4 cut(s) 109, 152, 412, 539
AjiI CACGTC 1 cut(s) 1663
AjnI CCWGG 5 cut(s) 193, 461, 664, 883, 1212
AluBI AGCT 9 cut(s) 187, 982, 1349, 1427, 1462, 1486, 1599, 1721, 1944
AluI AGCT 9 cut(s) 187, 982, 1349, 1427, 1462, 1486, 1599, 1721, 1944
Alw21I GWGCWC 1 cut(s) 189
Alw26I GTCTC 2 cut(s) 970, 1512
AlwI GGATC 4 cut(s) 271, 476, 489, 518
AlwNI CAGNNNCTG 1 cut(s) 1145
Ama87I CYCGRG 1 cut(s) 764
AoxI GGCC 5 cut(s) 497, 750, 1057, 1359, 1545
ApeKI GCWGC 3 cut(s) 18, 1110, 1718
ApoI RAATTY 1 cut(s) 326
AspS9I GGNCC 2 cut(s) 498, 1546
AsuC2I CCSGG 1 cut(s) 571
AsuHPI GGTGA 9 cut(s) 61, 167, 323, 407, 1259, 1478, 1664, 1787, 1843
AsuNHI GCTAGC 1 cut(s) 982
AvaI CYCGRG 1 cut(s) 764
BamHI GGATCC 1 cut(s) 481
BanI GGYRCC 1 cut(s) 1307
BanII GRGCYC 1 cut(s) 189
BarI GAAGNNNNNNTAC 2 cut(s) 7, 39
BauI CACGAG 1 cut(s) 1487
BbsI GAAGAC 3 cut(s) 480, 1159, 1643
Bbv12I GWGCWC 1 cut(s) 189
BbvCI CCTCAGC 1 cut(s) 1363
BbvI GCAGC 3 cut(s) 30, 1097, 1730
BccI CCATC 5 cut(s) 329, 919, 1212, 1559, 1828
BceAI ACGGC 1 cut(s) 1106
BcgI CGANNNNNNTGC 6 cut(s) 113, 147, 187, 221, 323, 357
BciT130I CCWGG 5 cut(s) 195, 463, 666, 885, 1214
BciVI GTATCC 1 cut(s) 1532
BclI TGATCA 1 cut(s) 1147
BcnI CCSGG 1 cut(s) 571
BcoDI GTCTC 2 cut(s) 970, 1512
BfaI CTAG 4 cut(s) 983, 1055, 1575, 1941
BfuI GTATCC 1 cut(s) 1532
BisI GCNGC 5 cut(s) 19, 770, 1111, 1195, 1719
BlpI GCTNAGC 1 cut(s) 1482
BlsI GCNGC 5 cut(s) 20, 771, 1112, 1196, 1720
Bme1390I CCNGG 6 cut(s) 195, 463, 571, 666, 885, 1214
BmeT110I CYCGRG 1 cut(s) 764
BmgBI CACGTC 1 cut(s) 1663
BmgT120I GGNCC 2 cut(s) 498, 1546
BmiI GGNNCC 4 cut(s) 483, 500, 1309, 1548
BmrFI CCNGG 6 cut(s) 195, 463, 571, 666, 885, 1214
BmrI ACTGGG 4 cut(s) 157, 410, 487, 552
BmsI GCATC 3 cut(s) 148, 888, 1940
BmtI GCTAGC 1 cut(s) 986
BmuI ACTGGG 4 cut(s) 157, 410, 487, 552
BpiI GAAGAC 3 cut(s) 480, 1159, 1643
BplI GAGNNNNNCTC 2 cut(s) 443, 475
Bpu10I CCTNAGC 1 cut(s) 1363
Bpu1102I GCTNAGC 1 cut(s) 1482
BpuEI CTTGAG 1 cut(s) 995
BpuMI CCSGG 1 cut(s) 571
BsaBI GATNNNNATC 3 cut(s) 486, 515, 552
BsaI GGTCTC 1 cut(s) 1512
BsaJI CCNNGG 6 cut(s) 193, 462, 763, 1060, 1102, 1614
BsaXI ACNNNNNCTCC 4 cut(s) 477, 507, 938, 968
Bsc4I CCNNNNNNNGG 8 cut(s) 386, 506, 507, 724, 1032, 1326, 1503, 1823
Bse1I ACTGG 7 cut(s) 163, 265, 273, 405, 482, 558, 873
Bse3DI GCAATG 4 cut(s) 873, 1331, 1403, 1859
Bse8I GATNNNNATC 3 cut(s) 486, 515, 552
BseBI CCWGG 5 cut(s) 195, 463, 666, 885, 1214
BseDI CCNNGG 6 cut(s) 193, 462, 763, 1060, 1102, 1614
BseGI GGATG 3 cut(s) 94, 487, 1447
BseJI GATNNNNATC 3 cut(s) 486, 515, 552
BseLI CCNNNNNNNGG 8 cut(s) 386, 506, 507, 724, 1032, 1326, 1503, 1823
BseMI GCAATG 4 cut(s) 873, 1331, 1403, 1859
BseMII CTCAG 2 cut(s) 1377, 1523
BseNI ACTGG 7 cut(s) 163, 265, 273, 405, 482, 558, 873
BseX3I CGGCCG 1 cut(s) 750
BseXI GCAGC 3 cut(s) 30, 1097, 1730
BsgI GTGCAG 2 cut(s) 927, 1238
Bsh1285I CGRYCG 1 cut(s) 753
BshFI GGCC 5 cut(s) 499, 752, 1059, 1361, 1547
BshNI GGYRCC 1 cut(s) 1307
BsiEI CGRYCG 1 cut(s) 753
BsiHKAI GWGCWC 1 cut(s) 189
BsiHKCI CYCGRG 1 cut(s) 764
BsiSI CCGG 5 cut(s) 496, 570, 753, 957, 1865
BslFI GGGAC 3 cut(s) 263, 1543, 1649
BslI CCNNNNNNNGG 8 cut(s) 386, 506, 507, 724, 1032, 1326, 1503, 1823
BsmAI GTCTC 2 cut(s) 970, 1512
BsmFI GGGAC 3 cut(s) 263, 1543, 1649
BsmI GAATGC 1 cut(s) 1256
BsnI GGCC 5 cut(s) 499, 752, 1059, 1361, 1547
Bso31I GGTCTC 1 cut(s) 1512
BsoBI CYCGRG 1 cut(s) 764
Bsp1286I GDGCHC 1 cut(s) 189
Bsp143I GATC 6 cut(s) 263, 481, 510, 970, 1147, 1747
Bsp1720I GCTNAGC 1 cut(s) 1482
BspACI CCGC 5 cut(s) 390, 769, 1195, 1498, 1629
BspANI GGCC 5 cut(s) 499, 752, 1059, 1361, 1547
BspCNI CTCAG 2 cut(s) 1376, 1522
BspHI TCATGA 1 cut(s) 1237
BspLI GGNNCC 4 cut(s) 483, 500, 1309, 1548
BspOI GCTAGC 1 cut(s) 986
BspPI GGATC 4 cut(s) 271, 476, 489, 518
BspT107I GGYRCC 1 cut(s) 1307
BspTNI GGTCTC 1 cut(s) 1512
BsrDI GCAATG 4 cut(s) 873, 1331, 1403, 1859
BsrI ACTGG 7 cut(s) 163, 265, 273, 405, 482, 558, 873
BssECI CCNNGG 6 cut(s) 193, 462, 763, 1060, 1102, 1614
BssMI GATC 6 cut(s) 263, 481, 510, 970, 1147, 1747
BssSI CACGAG 1 cut(s) 1487
BssT1I CCWWGG 3 cut(s) 1060, 1102, 1614
Bst2BI CACGAG 1 cut(s) 1487
Bst2UI CCWGG 5 cut(s) 195, 463, 666, 885, 1214
Bst4CI ACNGT 5 cut(s) 371, 448, 625, 1437, 1652
Bst6I CTCTTC 2 cut(s) 535, 1121
BstAPI GCANNNNNTGC 1 cut(s) 51
BstC8I GCNNGC 3 cut(s) 30, 984, 1627
BstDEI CTNAG 4 cut(s) 1363, 1458, 1482, 1509
BstF5I GGATG 3 cut(s) 94, 487, 1447
BstKTI GATC 6 cut(s) 266, 484, 513, 973, 1150, 1750
BstMAI GTCTC 2 cut(s) 970, 1512
BstMBI GATC 6 cut(s) 263, 481, 510, 970, 1147, 1747
BstMCI CGRYCG 1 cut(s) 753
BstMWI GCNNNNNNNGC 3 cut(s) 18, 51, 227
BstNI CCWGG 5 cut(s) 195, 463, 666, 885, 1214
BstNSI RCATGY 3 cut(s) 221, 1079, 1885
BstSCI CCNGG 6 cut(s) 193, 461, 569, 664, 883, 1212
BstV1I GCAGC 3 cut(s) 30, 1097, 1730
BstV2I GAAGAC 3 cut(s) 480, 1159, 1643
BstX2I RGATCY 1 cut(s) 481
BstYI RGATCY 1 cut(s) 481
BstZI CGGCCG 1 cut(s) 750
BsuI GTATCC 1 cut(s) 1532
BsuRI GGCC 5 cut(s) 499, 752, 1059, 1361, 1547
BtgZI GCGATG 1 cut(s) 348
BtrI CACGTC 1 cut(s) 1663
BtsCI GGATG 3 cut(s) 94, 487, 1447
BtsI GCAGTG 1 cut(s) 252
BtsIMutI CAGTG 2 cut(s) 252, 266
Cac8I GCNNGC 3 cut(s) 30, 984, 1627
CaiI CAGNNNCTG 1 cut(s) 1145
CciI TCATGA 1 cut(s) 1237
Cfr13I GGNCC 2 cut(s) 498, 1546
CseI GACGC 1 cut(s) 1724
CsiI ACCWGGT 1 cut(s) 1212
Csp6I GTAC 5 cut(s) 24, 1006, 1339, 1433, 1791
CspCI CAANNNNNGTGG 2 cut(s) 1503, 1538
CviQI GTAC 5 cut(s) 24, 1006, 1339, 1433, 1791
DdeI CTNAG 4 cut(s) 1363, 1458, 1482, 1509
DpnI GATC 6 cut(s) 265, 483, 512, 972, 1149, 1749
DpnII GATC 6 cut(s) 263, 481, 510, 970, 1147, 1747
EaeI YGGCCR 1 cut(s) 750
EagI CGGCCG 1 cut(s) 750
Eam1104I CTCTTC 2 cut(s) 535, 1121
EarI CTCTTC 2 cut(s) 535, 1121
Ecl136II GAGCTC 1 cut(s) 187
EclXI CGGCCG 1 cut(s) 750
Eco130I CCWWGG 3 cut(s) 1060, 1102, 1614
Eco24I GRGCYC 1 cut(s) 189
Eco31I GGTCTC 1 cut(s) 1512
Eco32I GATATC 1 cut(s) 1417
Eco52I CGGCCG 1 cut(s) 750
Eco53kI GAGCTC 1 cut(s) 187
Eco57I CTGAAG 3 cut(s) 516, 1435, 1486
Eco88I CYCGRG 1 cut(s) 764
EcoICRI GAGCTC 1 cut(s) 187
EcoRII CCWGG 5 cut(s) 193, 461, 664, 883, 1212
EcoRV GATATC 1 cut(s) 1417
EcoT14I CCWWGG 3 cut(s) 1060, 1102, 1614
EcoT22I ATGCAT 3 cut(s) 589, 1270, 1887
EcoT38I GRGCYC 1 cut(s) 189
ErhI CCWWGG 3 cut(s) 1060, 1102, 1614
FaqI GGGAC 3 cut(s) 263, 1543, 1649
FauI CCCGC 1 cut(s) 1505
FauNDI CATATG 2 cut(s) 914, 1876
FbaI TGATCA 1 cut(s) 1147
FblI GTMKAC 1 cut(s) 303
Fnu4HI GCNGC 5 cut(s) 19, 770, 1111, 1195, 1719
FokI GGATG 3 cut(s) 81, 474, 1454
FriOI GRGCYC 1 cut(s) 189
Fsp4HI GCNGC 5 cut(s) 19, 770, 1111, 1195, 1719
FspBI CTAG 4 cut(s) 983, 1055, 1575, 1941
GluI GCNGC 5 cut(s) 19, 770, 1111, 1195, 1719
HaeIII GGCC 5 cut(s) 499, 752, 1059, 1361, 1547
HapII CCGG 5 cut(s) 496, 570, 753, 957, 1865
HgaI GACGC 1 cut(s) 1724
HincII GTYRAC 2 cut(s) 304, 700
HindII GTYRAC 2 cut(s) 304, 700
HindIII AAGCTT 1 cut(s) 1460
HinfI GANTC 8 cut(s) 458, 553, 937, 1089, 1131, 1164, 1493, 1583
HpaII CCGG 5 cut(s) 496, 570, 753, 957, 1865
HphI GGTGA 9 cut(s) 61, 167, 323, 407, 1259, 1478, 1664, 1787, 1843
Hpy166II GTNNAC 4 cut(s) 304, 398, 700, 1791
Hpy188I TCNGA 5 cut(s) 7, 942, 970, 1512, 1588
Hpy188III TCNNGA 6 cut(s) 174, 862, 974, 1238, 1712, 1895
Hpy8I GTNNAC 4 cut(s) 304, 398, 700, 1791
HpyAV CCTTC 7 cut(s) 115, 146, 171, 1044, 1298, 1564, 1626
HpyCH4III ACNGT 5 cut(s) 371, 448, 625, 1437, 1652
HpyCH4IV ACGT 2 cut(s) 1431, 1662
HpyF10VI GCNNNNNNNGC 3 cut(s) 18, 51, 227
HpyF3I CTNAG 4 cut(s) 1363, 1458, 1482, 1509
HpySE526I ACGT 2 cut(s) 1431, 1662
Ksp22I TGATCA 1 cut(s) 1147
Kzo9I GATC 6 cut(s) 263, 481, 510, 970, 1147, 1747
Lsp1109I GCAGC 3 cut(s) 30, 1097, 1730
LweI GCATC 3 cut(s) 148, 888, 1940
MabI ACCWGGT 1 cut(s) 1212
MaeI CTAG 4 cut(s) 983, 1055, 1575, 1941
MaeII ACGT 2 cut(s) 1431, 1662
MaeIII GTNAC 3 cut(s) 442, 560, 727
MalI GATC 6 cut(s) 265, 483, 512, 972, 1149, 1749
MboI GATC 6 cut(s) 263, 481, 510, 970, 1147, 1747
MfeI CAATTG 1 cut(s) 732
MflI RGATCY 1 cut(s) 481
MhlI GDGCHC 1 cut(s) 189
MlyI GAGTC 3 cut(s) 452, 1083, 1173
MmeI TCCRAC 4 cut(s) 193, 789, 1419, 1759
MnlI CCTC 8 cut(s) 773, 1058, 1100, 1372, 1513, 1831, 1914, 1920
Mph1103I ATGCAT 3 cut(s) 589, 1270, 1887
MseI TTAA 3 cut(s) 429, 795, 1199
MslI CAYNNNNRTG 2 cut(s) 296, 896
MspA1I CMGCKG 1 cut(s) 1721
MspI CCGG 5 cut(s) 496, 570, 753, 957, 1865
MspR9I CCNGG 6 cut(s) 195, 463, 571, 666, 885, 1214
MunI CAATTG 1 cut(s) 732
Mva1269I GAATGC 1 cut(s) 1256
MvaI CCWGG 5 cut(s) 195, 463, 666, 885, 1214
MwoI GCNNNNNNNGC 3 cut(s) 18, 51, 227
NciI CCSGG 1 cut(s) 571
NdeI CATATG 2 cut(s) 914, 1876
NdeII GATC 6 cut(s) 263, 481, 510, 970, 1147, 1747
NheI GCTAGC 1 cut(s) 982
NlaIV GGNNCC 4 cut(s) 483, 500, 1309, 1548
NsiI ATGCAT 3 cut(s) 589, 1270, 1887
NspI RCATGY 3 cut(s) 221, 1079, 1885
PagI TCATGA 1 cut(s) 1237
PctI GAATGC 1 cut(s) 1256
PfeI GAWTC 5 cut(s) 553, 937, 1131, 1493, 1583
PkrI GCNGC 5 cut(s) 20, 771, 1112, 1196, 1720
PleI GAGTC 3 cut(s) 452, 1083, 1172
PpsI GAGTC 3 cut(s) 452, 1083, 1172
PsiI TTATAA 2 cut(s) 600, 1158
Psp124BI GAGCTC 1 cut(s) 189
Psp6I CCWGG 5 cut(s) 193, 461, 664, 883, 1212
PspGI CCWGG 5 cut(s) 193, 461, 664, 883, 1212
PspN4I GGNNCC 4 cut(s) 483, 500, 1309, 1548
PspPI GGNCC 2 cut(s) 498, 1546
PstNI CAGNNNCTG 1 cut(s) 1145
PsuI RGATCY 1 cut(s) 481
PvuII CAGCTG 1 cut(s) 1721
RsaI GTAC 5 cut(s) 25, 1007, 1340, 1434, 1792
RsaNI GTAC 5 cut(s) 24, 1006, 1339, 1433, 1791
RseI CAYNNNNRTG 2 cut(s) 296, 896
SacI GAGCTC 1 cut(s) 189
SalI GTCGAC 1 cut(s) 302
SaqAI TTAA 3 cut(s) 429, 795, 1199
SatI GCNGC 5 cut(s) 19, 770, 1111, 1195, 1719
Sau3AI GATC 6 cut(s) 263, 481, 510, 970, 1147, 1747
Sau96I GGNCC 2 cut(s) 498, 1546
SchI GAGTC 3 cut(s) 452, 1083, 1173
ScrFI CCNGG 6 cut(s) 195, 463, 571, 666, 885, 1214
SduI GDGCHC 1 cut(s) 189
SexAI ACCWGGT 1 cut(s) 1212
SfaNI GCATC 3 cut(s) 148, 888, 1940
SmiMI CAYNNNNRTG 2 cut(s) 296, 896
SmlI CTYRAG 1 cut(s) 974
SmoI CTYRAG 1 cut(s) 974
SsiI CCGC 5 cut(s) 390, 769, 1195, 1498, 1629
SspI AATATT 2 cut(s) 49, 1708
SspMI CTAG 4 cut(s) 983, 1055, 1575, 1941
SstI GAGCTC 1 cut(s) 189
StyD4I CCNGG 6 cut(s) 193, 461, 569, 664, 883, 1212
StyI CCWWGG 3 cut(s) 1060, 1102, 1614
TaaI ACNGT 5 cut(s) 371, 448, 625, 1437, 1652
TaiI ACGT 2 cut(s) 1434, 1665
TaqI TCGA 8 cut(s) 123, 207, 303, 456, 639, 800, 1207, 1750
TatI WGTACW 1 cut(s) 1790
TauI GCSGC 2 cut(s) 772, 1197
TfiI GAWTC 5 cut(s) 553, 937, 1131, 1493, 1583
Tru1I TTAA 3 cut(s) 429, 795, 1199
Tru9I TTAA 3 cut(s) 429, 795, 1199
TscAI CASTG 2 cut(s) 259, 273
TseI GCWGC 3 cut(s) 18, 1110, 1718
TspRI CASTG 2 cut(s) 259, 273
XapI RAATTY 1 cut(s) 326
XceI RCATGY 3 cut(s) 221, 1079, 1885
XcmI CCANNNNNNNNNTGG 2 cut(s) 134, 1674
XmiI GTMKAC 1 cut(s) 303
XspI CTAG 4 cut(s) 983, 1055, 1575, 1941
Zsp2I ATGCAT 3 cut(s) 589, 1270, 1887
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.