FvH4_3g19350

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
12498485 .. 12503851
5367 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g19350.t1

Sequence Viewer

Length: 2631 bp
ATGGCTGAAAAAAACACATTCAGGTTGTCCCTAAAGCAGTTTCAAATGATTCTTCTTCTCCTACTAGTTTTGCCCTTCTCTGCAACTCCATTGACCTTCAACTTCTCTAGCTTTCCACCTGCTGTTACAAACAATATATCTATGGAGGGAGATGCTTTCTCCGATGGCTCCCTCCGACTTACCAAAAGTGCTCGTGACGAGGTGATAAATGGCAGCGTCGCACCGCCAGGGTCCTTACTAAACCATACACTAGGACAAGGTAGCAGCCTTGGCCTCCCTGTCAACAGTAGGCTGGCAAATAAAACCATGTCCAGCACTGAATACCCGTTTGTCGCCGTCGAGTTTGATATCTTCCCCAATAATAAGTCAGAATCTATTGATTGGTGTCTGAATTATGTTCATGCCGGCATCGACATCAACTCCCTCAAGTCCAACGTTACGGAGCCATGGGATGGTGGTATTAGCACAGCAAAAGAAAATAATGCCACAATTACTTACAACTCCACCTCGAAAAATCTTAGTGTTGCATTCACTACGATTCAAATTGGTGTAGATGGTGACGAAGTCCAGATGATCAAAAGTATGTATTTCTTAGTTGATCTGCTTCGATACTTGCCTGATAGGGTCATTGTCGGATTCTCTGCTTCAACCGGTAATGCAGTTGCTCTGCATAAGATCATGTCATGGAATTTTACTTCAACTCCTCTGCTTGATGATAATGCAGCATTGACCACAAGATCTAACAACAATAGGGAAGGACTAATTGTCGGGTTGGGTGTTGGTGGAGGTGCTACCTTGGTCGGTTTGTTGGCTTTGGTTTGGCTCATCTTATACAGGAAGAGGAGGGAAACAGCTCGGGAAAGTAGTGATGATGATATCAGTGTACTTAATGATATGATTCCTGAAGAATTCGAAAAGGGGACAGTCCCTACGAAGTTCAAGTACAATGAATTGGCCCTTGCGACTAGTAATTTTGTACATGGAGAAAAGCTTGGGGAGGGAGGGTTTGGTGGAGTATACAAAGGATTCATCAAAGATATGAACTCGTATGTAGCTGTTAAGAAGATATCAAGCGGGTCTAAACAAGGGCTGAAGGAGTATGCAGCAGAAGTGAACATTATTAGTCGGCTCAGGCATCGGAATCTGGTGCAACTCATCGGTTGGTGCCATGATAAGAAACTCCTCCTTGTCTACGAATTCATGCCCAACGGTAGCTTGGATTCTCATTTGTTCAATGAAAAAAGCTTGTTAACTTGGGAGGTAAGATACAAAATTGCACATGGATTGGCCTCGGGGTTGCTCTATCTACACCAAGGATGGGAACAATGTGTGCTGCACAGGGATATCAAATCCAGCAATGTTATGTTGGATTCGAATTTTAACACGAAACTTGGAGATTTCGGGTTAGCTCGACTTGTGGACCACGGAAAAATGTCACAAACAACCATTGTGGCTGGGACTAGGGGATACATGGCTCTAGAGTATGTTACAACAGGAAAGGCTAGCAAGCAATCAGACGTCTACAGCTTTGGAGTTGTTGCTCTAGAAATAGCATGCGGGAGAAAACCCATCGATCTCAATTTGGAAAACACTCGAGTCGATATGGTGGAGTGGGTTTGGGGACTTTATGGTGAAGGGAAAGTCATTGAAGCAGCTGACCCGAAGCTGTGTGGATATTTTGATGAGAAACAAATGGAGTTTTTGATGATGGTAGGGTTGTGGTGTGCTCATCCGGATTACAATATGAGGCCTTCAATGCAACAAGCAATTCAAGTACTTAACTTCGAAGTTGCATGGCCTTTTCTCCCATTAGAGATGCCAATGGCTACCTTTCCTCAAACATCTCGACCAATCTCCTCTACTAACATTACTGGTTTAGAAGCAAGCAAAACTGAGTCTAGCTATAATGGAGGTTATAGCAGCTATTCATCAAGTTCCTCTAATCGACTAATCCCTTCTGCTTGTGAGTCTCGACGAGACGACGATGGTCACGACGCCTCTCTTCGGCTCTTCCTCTCTGCCTTTCGACTAGACGACGACGCACGCCTCTCTTCCTCTCCGGCCTCCGCGGCTCTCTTCCTCTCCGGCCTCCACGGCTCTCTTCCTCTCCGGCTTCCGCGGCTCTCTTCCTCTCTTCGGCTCTTCCTCTCTGCCTTTCGACTAGACGACGACACACGCCTCTCTTCCTCTTCGGCCTCCGCGGCTCTCTTCCTCTCTGGCTCCGGCCTGCGCGCGTCTCTTCCTCTCCGGCCTCCGCGCCTCTCTTATTCTCCGCCTCAGTCGCCCGCCGACTCCGTCGGAGATGACATTGAACTGATTGAAGAAGTACAAGGTCAGACTCAGACCGGGAATGATTTGGTTGTGGCGGAGGCTGAGATGCCTGAGAACAAGGAGCCAGAAGTCCCAGAACCAAAAGCTCCAATTGAGAAAGTGCACGCGGGGAATGAGAATCGTGCACTATGCATCCATTGTGGCGCTGACCTCAAAGCAGATTCTTCTTTTAACGGCACAAGCACTTTGCGTAGGCATATTCAAAAAGTATGCAAGAAGTATGCTGGGAGGGAAAATATAGATGACGGACAAGCTGTGATTGCTGGGGATGGTGAAGTCGAACCTGAAATGGAACTTTAG

Protein Analysis

877

Amino Acids

96.08

Weight (kDa)

5.49

Isoelectric Point (pI)

40.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 86 - 235 1.6e-29 Legume lectin domain
Pkinase PF00069 326 - 591 4.5e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 328 - 535 2.5e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 127
AatII GACGTC 1 cut(s) 1521
Acc36I ACCTGC 1 cut(s) 127
AccB1I GGYRCC 1 cut(s) 1164
AccB7I CCANNNNNTGG 1 cut(s) 452
AccI GTMKAC 3 cut(s) 1017, 1191, 1521
AccII CGCG 7 cut(s) 2069, 2119, 2201, 2232, 2234, 2257, 2438
AccIII TCCGGA 1 cut(s) 1732
AclI AACGTT 1 cut(s) 435
AcsI RAATTY 4 cut(s) 688, 908, 1196, 1375
AcuI CTGAAG 2 cut(s) 924, 1112
AcyI GRCGYC 2 cut(s) 1518, 1995
AfaI GTAC 5 cut(s) 885, 944, 978, 1776, 2328
AfiI CCNNNNNNNGG 4 cut(s) 452, 1318, 2004, 2136
AgeI ACCGGT 1 cut(s) 650
AhdI GACNNNNNGTC 1 cut(s) 764
AhlI ACTAGT 2 cut(s) 64, 965
AjnI CCWGG 1 cut(s) 226
Alw21I GWGCWC 4 cut(s) 193, 1729, 2436, 2458
Alw26I GTCTC 3 cut(s) 1971, 1974, 2241
Alw44I GTGCAC 2 cut(s) 2432, 2454
Ama87I CYCGRG 3 cut(s) 855, 1291, 1593
Aor13HI TCCGGA 1 cut(s) 1732
ApaLI GTGCAC 2 cut(s) 2432, 2454
ApeKI GCWGC 7 cut(s) 213, 264, 722, 1103, 1333, 1652, 1920
ApoI RAATTY 4 cut(s) 688, 908, 1196, 1375
AsiGI ACCGGT 1 cut(s) 650
AspLEI GCGC 4 cut(s) 2232, 2234, 2259, 2477
AspS9I GGNCC 3 cut(s) 231, 955, 1420
AsuC2I CCSGG 1 cut(s) 2347
AsuHPI GGTGA 4 cut(s) 214, 569, 1643, 2615
AsuII TTCGAA 3 cut(s) 912, 1373, 1785
AsuNHI GCTAGC 1 cut(s) 1502
AvaI CYCGRG 3 cut(s) 855, 1291, 1593
AvaII GGWCC 2 cut(s) 231, 1420
BaeGI GKGCMC 2 cut(s) 2436, 2458
BanI GGYRCC 1 cut(s) 1164
BarI GAAGNNNNNNTAC 2 cut(s) 926, 958
BauI CACGAG 1 cut(s) 192
Bbv12I GWGCWC 4 cut(s) 193, 1729, 2436, 2458
BbvI GCAGC 7 cut(s) 225, 276, 734, 1115, 1320, 1664, 1932
BccI CCATC 8 cut(s) 158, 446, 548, 1311, 1577, 1702, 1979, 2594
BceAI ACGGC 3 cut(s) 320, 2110, 2521
BciT130I CCWGG 1 cut(s) 228
BciVI GTATCC 1 cut(s) 1460
BclI TGATCA 1 cut(s) 573
BcnI CCSGG 1 cut(s) 2347
BcoDI GTCTC 3 cut(s) 1971, 1974, 2241
BcuI ACTAGT 2 cut(s) 64, 965
BfmI CTRYAG 1 cut(s) 1522
BfoI RGCGCY 1 cut(s) 2478
BfuAI ACCTGC 1 cut(s) 127
BfuI GTATCC 1 cut(s) 1460
BglI GCCNNNNNGGC 3 cut(s) 2069, 2094, 2201
BglII AGATCT 1 cut(s) 737
BmcAI AGTACT 1 cut(s) 1776
Bme1390I CCNGG 2 cut(s) 228, 2347
Bme18I GGWCC 2 cut(s) 231, 1420
BmeRI GACNNNNNGTC 1 cut(s) 764
BmeT110I CYCGRG 3 cut(s) 855, 1291, 1593
BmgT120I GGNCC 3 cut(s) 231, 955, 1420
BmiI GGNNCC 6 cut(s) 169, 232, 444, 1166, 2221, 2394
BmrFI CCNGG 2 cut(s) 228, 2347
BmsI GCATC 6 cut(s) 142, 417, 1144, 1806, 2367, 2472
BmtI GCTAGC 1 cut(s) 1506
BoxI GACNNNNGTC 1 cut(s) 1986
Bpu10I CCTNAGC 1 cut(s) 1130
Bpu14I TTCGAA 3 cut(s) 912, 1373, 1785
BpuEI CTTGAG 1 cut(s) 410
BpuMI CCSGG 1 cut(s) 2347
Bsa29I ATCGAT 1 cut(s) 1572
BsaHI GRCGYC 2 cut(s) 1518, 1995
BsaWI WCCGGW 2 cut(s) 650, 1732
BsaXI ACNNNNNCTCC 6 cut(s) 404, 434, 685, 715, 989, 1019
Bsc4I CCNNNNNNNGG 4 cut(s) 452, 1318, 2004, 2136
Bse118I RCCGGY 2 cut(s) 404, 650
Bse1I ACTGG 1 cut(s) 1876
Bse3DI GCAATG 1 cut(s) 1363
BseAI TCCGGA 1 cut(s) 1732
BseBI CCWGG 1 cut(s) 228
BseCI ATCGAT 1 cut(s) 1572
BseGI GGATG 5 cut(s) 457, 1322, 1729, 2463, 2605
BseLI CCNNNNNNNGG 4 cut(s) 452, 1318, 2004, 2136
BseMI GCAATG 1 cut(s) 1363
BseMII CTCAG 6 cut(s) 1144, 1884, 2291, 2354, 2364, 2373
BseNI ACTGG 1 cut(s) 1876
BsePI GCGCGC 1 cut(s) 2230
BseRI GAGGAG 4 cut(s) 693, 856, 1172, 1846
BseSI GKGCMC 2 cut(s) 2436, 2458
BseXI GCAGC 7 cut(s) 225, 276, 734, 1115, 1320, 1664, 1932
BseYI CCCAGC 3 cut(s) 1454, 2555, 2594
BsgI GTGCAG 1 cut(s) 1319
Bsh1236I CGCG 7 cut(s) 2069, 2119, 2201, 2232, 2234, 2257, 2438
BshNI GGYRCC 1 cut(s) 1164
BshTI ACCGGT 1 cut(s) 650
BshVI ATCGAT 1 cut(s) 1572
BsiHKAI GWGCWC 4 cut(s) 193, 1729, 2436, 2458
BsiHKCI CYCGRG 3 cut(s) 855, 1291, 1593
BsiSI CCGG 9 cut(s) 405, 651, 1733, 2060, 2085, 2110, 2223, 2248, 2346
BslFI GGGAC 6 cut(s) 13, 911, 934, 1471, 1635, 2387
BslI CCNNNNNNNGG 4 cut(s) 452, 1318, 2004, 2136
BsmAI GTCTC 3 cut(s) 1971, 1974, 2241
BsmBI CGTCTC 2 cut(s) 1971, 2241
BsmFI GGGAC 6 cut(s) 13, 911, 934, 1471, 1635, 2387
BsmI GAATGC 1 cut(s) 527
BsoBI CYCGRG 3 cut(s) 855, 1291, 1593
Bsp119I TTCGAA 3 cut(s) 912, 1373, 1785
Bsp1286I GDGCHC 4 cut(s) 193, 1729, 2436, 2458
Bsp13I TCCGGA 1 cut(s) 1732
Bsp1407I TGTACA 1 cut(s) 976
Bsp143I GATC 5 cut(s) 573, 598, 675, 737, 1573
Bsp19I CCATGG 1 cut(s) 446
BspCNI CTCAG 6 cut(s) 1143, 1885, 2290, 2353, 2365, 2374
BspDI ATCGAT 1 cut(s) 1572
BspEI TCCGGA 1 cut(s) 1732
BspFNI CGCG 7 cut(s) 2069, 2119, 2201, 2232, 2234, 2257, 2438
BspLI GGNNCC 6 cut(s) 169, 232, 444, 1166, 2221, 2394
BspMI ACCTGC 1 cut(s) 127
BspOI GCTAGC 1 cut(s) 1506
BspQI GCTCTTC 2 cut(s) 2015, 2147
BspT104I TTCGAA 3 cut(s) 912, 1373, 1785
BspT107I GGYRCC 1 cut(s) 1164
BsrDI GCAATG 1 cut(s) 1363
BsrFI RCCGGY 2 cut(s) 404, 650
BsrGI TGTACA 1 cut(s) 976
BsrI ACTGG 1 cut(s) 1876
BssAI RCCGGY 2 cut(s) 404, 650
BssHII GCGCGC 1 cut(s) 2230
BssMI GATC 5 cut(s) 573, 598, 675, 737, 1573
BssNAI GTATAC 1 cut(s) 1018
BssNI GRCGYC 2 cut(s) 1518, 1995
BssSI CACGAG 1 cut(s) 192
BssT1I CCWWGG 4 cut(s) 268, 446, 795, 1312
Bst1107I GTATAC 1 cut(s) 1018
Bst2BI CACGAG 1 cut(s) 192
Bst2UI CCWGG 1 cut(s) 228
Bst4CI ACNGT 3 cut(s) 287, 925, 1211
BstACI GRCGYC 2 cut(s) 1518, 1995
BstAUI TGTACA 1 cut(s) 976
BstBI TTCGAA 3 cut(s) 912, 1373, 1785
BstDEI CTNAG 8 cut(s) 518, 592, 1130, 1893, 2277, 2340, 2373, 2382
BstDSI CCRYGG 6 cut(s) 446, 1423, 2067, 2092, 2117, 2199
BstF5I GGATG 5 cut(s) 457, 1322, 1729, 2463, 2605
BstFNI CGCG 7 cut(s) 2069, 2119, 2201, 2232, 2234, 2257, 2438
BstH2I RGCGCY 1 cut(s) 2478
BstHHI GCGC 4 cut(s) 2232, 2234, 2259, 2477
BstKTI GATC 5 cut(s) 576, 601, 678, 740, 1576
BstMAI GTCTC 3 cut(s) 1971, 1974, 2241
BstMBI GATC 5 cut(s) 573, 598, 675, 737, 1573
BstMWI GCNNNNNNNGC 8 cut(s) 270, 1756, 2069, 2094, 2119, 2201, 2281, 2591
BstNI CCWGG 1 cut(s) 228
BstNSI RCATGY 1 cut(s) 1557
BstPAI GACNNNNGTC 1 cut(s) 1986
BstSCI CCNGG 2 cut(s) 226, 2345
BstSFI CTRYAG 1 cut(s) 1522
BstSLI GKGCMC 2 cut(s) 2436, 2458
BstUI CGCG 7 cut(s) 2069, 2119, 2201, 2232, 2234, 2257, 2438
BstV1I GCAGC 7 cut(s) 225, 276, 734, 1115, 1320, 1664, 1932
BstX2I RGATCY 1 cut(s) 737
BstYI RGATCY 1 cut(s) 737
BstZ17I GTATAC 1 cut(s) 1018
Bsu15I ATCGAT 1 cut(s) 1572
BsuI GTATCC 1 cut(s) 1460
BsuTUI ATCGAT 1 cut(s) 1572
BtgI CCRYGG 6 cut(s) 446, 1423, 2067, 2092, 2117, 2199
BtsCI GGATG 5 cut(s) 457, 1322, 1729, 2463, 2605
BtsIMutI CAGTG 2 cut(s) 315, 886
BveI ACCTGC 1 cut(s) 127
CfoI GCGC 4 cut(s) 2232, 2234, 2259, 2477
Cfr10I RCCGGY 2 cut(s) 404, 650
Cfr13I GGNCC 3 cut(s) 231, 955, 1420
Cfr42I CCGCGG 3 cut(s) 2070, 2120, 2202
ClaI ATCGAT 1 cut(s) 1572
CseI GACGC 4 cut(s) 205, 2003, 2048, 2223
Csp6I GTAC 5 cut(s) 884, 943, 977, 1775, 2327
CspAI ACCGGT 1 cut(s) 650
CspCI CAANNNNNGTGG 2 cut(s) 1431, 1466
CviQI GTAC 5 cut(s) 884, 943, 977, 1775, 2327
DdeI CTNAG 8 cut(s) 518, 592, 1130, 1893, 2277, 2340, 2373, 2382
DpnI GATC 5 cut(s) 575, 600, 677, 739, 1575
DpnII GATC 5 cut(s) 573, 598, 675, 737, 1573
DriI GACNNNNNGTC 1 cut(s) 764
Eam1105I GACNNNNNGTC 1 cut(s) 764
EciI GGCGGA 2 cut(s) 2262, 2381
Eco130I CCWWGG 4 cut(s) 268, 446, 795, 1312
Eco147I AGGCCT 1 cut(s) 1750
Eco32I GATATC 4 cut(s) 349, 877, 1068, 1345
Eco47I GGWCC 2 cut(s) 231, 1420
Eco57I CTGAAG 2 cut(s) 924, 1112
Eco88I CYCGRG 3 cut(s) 855, 1291, 1593
EcoO109I RGGNCCY 1 cut(s) 231
EcoRI GAATTC 2 cut(s) 908, 1196
EcoRII CCWGG 1 cut(s) 226
EcoRV GATATC 4 cut(s) 349, 877, 1068, 1345
EcoT14I CCWWGG 4 cut(s) 268, 446, 795, 1312
EcoT22I ATGCAT 1 cut(s) 2465
ErhI CCWWGG 4 cut(s) 268, 446, 795, 1312
Esp3I CGTCTC 2 cut(s) 1971, 2241
FaqI GGGAC 6 cut(s) 13, 911, 934, 1471, 1635, 2387
FauI CCCGC 4 cut(s) 1067, 1550, 2293, 2431
FbaI TGATCA 1 cut(s) 573
FblI GTMKAC 3 cut(s) 1017, 1191, 1521
FokI GGATG 5 cut(s) 464, 1329, 1716, 2450, 2612
GlaI GCGC 4 cut(s) 2231, 2233, 2258, 2476
GsaI CCCAGC 3 cut(s) 1458, 2559, 2598
HaeII RGCGCY 1 cut(s) 2478
HapII CCGG 9 cut(s) 405, 651, 1733, 2060, 2085, 2110, 2223, 2248, 2346
HgaI GACGC 4 cut(s) 205, 2003, 2048, 2223
HhaI GCGC 4 cut(s) 2232, 2234, 2259, 2477
Hin1I GRCGYC 2 cut(s) 1518, 1995
Hin6I GCGC 4 cut(s) 2230, 2232, 2257, 2475
HinP1I GCGC 4 cut(s) 2230, 2232, 2257, 2475
HincII GTYRAC 2 cut(s) 283, 1251
HindII GTYRAC 2 cut(s) 283, 1251
HindIII AAGCTT 2 cut(s) 989, 1243
HpaI GTTAAC 1 cut(s) 1251
HpaII CCGG 9 cut(s) 405, 651, 1733, 2060, 2085, 2110, 2223, 2248, 2346
HphI GGTGA 4 cut(s) 214, 569, 1643, 2615
Hpy99I CGWCG 9 cut(s) 221, 341, 1977, 1985, 1997, 2039, 2042, 2171, 2300
HpyAV CCTTC 7 cut(s) 85, 106, 749, 1087, 1628, 1761, 1965
HpyCH4III ACNGT 3 cut(s) 287, 925, 1211
HpyCH4IV ACGT 2 cut(s) 435, 1518
HpyF10VI GCNNNNNNNGC 8 cut(s) 270, 1756, 2069, 2094, 2119, 2201, 2281, 2591
HpyF3I CTNAG 8 cut(s) 518, 592, 1130, 1893, 2277, 2340, 2373, 2382
HpySE526I ACGT 2 cut(s) 435, 1518
Hsp92I GRCGYC 2 cut(s) 1518, 1995
HspAI GCGC 4 cut(s) 2230, 2232, 2257, 2475
Kpn2I TCCGGA 1 cut(s) 1732
KroI GCCGGC 1 cut(s) 404
KroNI GCCGGC 1 cut(s) 406
Ksp22I TGATCA 1 cut(s) 573
KspAI GTTAAC 1 cut(s) 1251
KspI CCGCGG 3 cut(s) 2070, 2120, 2202
Kzo9I GATC 5 cut(s) 573, 598, 675, 737, 1573
LguI GCTCTTC 2 cut(s) 2015, 2147
LmnI GCTCC 5 cut(s) 173, 442, 2225, 2392, 2422
Lsp1109I GCAGC 7 cut(s) 225, 276, 734, 1115, 1320, 1664, 1932
LweI GCATC 6 cut(s) 142, 417, 1144, 1806, 2367, 2472
MaeII ACGT 2 cut(s) 435, 1518
MaeIII GTNAC 7 cut(s) 124, 194, 436, 557, 1434, 1486, 1988
MalI GATC 5 cut(s) 575, 600, 677, 739, 1575
MboI GATC 5 cut(s) 573, 598, 675, 737, 1573
MfeI CAATTG 1 cut(s) 2421
MflI RGATCY 1 cut(s) 737
MhlI GDGCHC 4 cut(s) 193, 1729, 2436, 2458
MlyI GAGTC 5 cut(s) 1605, 1904, 1976, 2285, 2332
MmeI TCCRAC 5 cut(s) 199, 456, 613, 1347, 2278
Mph1103I ATGCAT 1 cut(s) 2465
MroI TCCGGA 1 cut(s) 1732
MroNI GCCGGC 1 cut(s) 404
MseI TTAA 6 cut(s) 888, 1059, 1250, 1380, 1779, 2502
MspA1I CMGCKG 4 cut(s) 1655, 2069, 2119, 2201
MspI CCGG 9 cut(s) 405, 651, 1733, 2060, 2085, 2110, 2223, 2248, 2346
MspR9I CCNGG 2 cut(s) 228, 2347
MunI CAATTG 1 cut(s) 2421
Mva1269I GAATGC 1 cut(s) 527
MvaI CCWGG 1 cut(s) 228
MvnI CGCG 7 cut(s) 2069, 2119, 2201, 2232, 2234, 2257, 2438
MwoI GCNNNNNNNGC 8 cut(s) 270, 1756, 2069, 2094, 2119, 2201, 2281, 2591
NaeI GCCGGC 1 cut(s) 406
NciI CCSGG 1 cut(s) 2347
NcoI CCATGG 1 cut(s) 446
NdeII GATC 5 cut(s) 573, 598, 675, 737, 1573
NgoMIV GCCGGC 1 cut(s) 404
NheI GCTAGC 1 cut(s) 1502
NlaIV GGNNCC 6 cut(s) 169, 232, 444, 1166, 2221, 2394
NmuCI GTSAC 4 cut(s) 194, 557, 1434, 1988
NsiI ATGCAT 1 cut(s) 2465
NspI RCATGY 1 cut(s) 1557
NspV TTCGAA 3 cut(s) 912, 1373, 1785
PaeI GCATGC 1 cut(s) 1557
PaeR7I CTCGAG 1 cut(s) 1593
PaqCI CACCTGC 1 cut(s) 127
PauI GCGCGC 1 cut(s) 2230
PceI AGGCCT 1 cut(s) 1750
PciSI GCTCTTC 2 cut(s) 2015, 2147
PcsI WCGNNNNNNNCGW 1 cut(s) 1989
PctI GAATGC 1 cut(s) 527
PdiI GCCGGC 1 cut(s) 406
PflFI GACNNNGTC 2 cut(s) 563, 2294
PflMI CCANNNNNTGG 1 cut(s) 452
PinAI ACCGGT 1 cut(s) 650
PleI GAGTC 5 cut(s) 1604, 1903, 1975, 2285, 2332
PpsI GAGTC 5 cut(s) 1604, 1903, 1975, 2285, 2332
PpuMI RGGWCCY 1 cut(s) 231
PshAI GACNNNNGTC 1 cut(s) 1986
Psp1406I AACGTT 1 cut(s) 435
Psp5II RGGWCCY 1 cut(s) 231
Psp6I CCWGG 1 cut(s) 226
PspFI CCCAGC 3 cut(s) 1454, 2555, 2594
PspGI CCWGG 1 cut(s) 226
PspN4I GGNNCC 6 cut(s) 169, 232, 444, 1166, 2221, 2394
PspPI GGNCC 3 cut(s) 231, 955, 1420
PspPPI RGGWCCY 1 cut(s) 231
PspXI VCTCGAGB 1 cut(s) 1593
PsuI RGATCY 1 cut(s) 737
PsyI GACNNNGTC 2 cut(s) 563, 2294
PteI GCGCGC 1 cut(s) 2230
PvuII CAGCTG 1 cut(s) 1655
RsaI GTAC 5 cut(s) 885, 944, 978, 1776, 2328
RsaNI GTAC 5 cut(s) 884, 943, 977, 1775, 2327
SacII CCGCGG 3 cut(s) 2070, 2120, 2202
SapI GCTCTTC 2 cut(s) 2015, 2147
SaqAI TTAA 6 cut(s) 888, 1059, 1250, 1380, 1779, 2502
Sau3AI GATC 5 cut(s) 573, 598, 675, 737, 1573
Sau96I GGNCC 3 cut(s) 231, 955, 1420
ScaI AGTACT 1 cut(s) 1776
SchI GAGTC 5 cut(s) 1605, 1904, 1976, 2285, 2332
ScrFI CCNGG 2 cut(s) 228, 2347
SduI GDGCHC 4 cut(s) 193, 1729, 2436, 2458
SfaNI GCATC 6 cut(s) 142, 417, 1144, 1806, 2367, 2472
SfcI CTRYAG 1 cut(s) 1522
Sfr274I CTCGAG 1 cut(s) 1593
Sfr303I CCGCGG 3 cut(s) 2070, 2120, 2202
SfuI TTCGAA 3 cut(s) 912, 1373, 1785
SgrBI CCGCGG 3 cut(s) 2070, 2120, 2202
SinI GGWCC 2 cut(s) 231, 1420
SlaI CTCGAG 1 cut(s) 1593
SmlI CTYRAG 2 cut(s) 425, 1593
SmoI CTYRAG 2 cut(s) 425, 1593
SpeI ACTAGT 2 cut(s) 64, 965
SphI GCATGC 1 cut(s) 1557
SseBI AGGCCT 1 cut(s) 1750
StuI AGGCCT 1 cut(s) 1750
StyD4I CCNGG 2 cut(s) 226, 2345
StyI CCWWGG 4 cut(s) 268, 446, 795, 1312
TaaI ACNGT 3 cut(s) 287, 925, 1211
TaiI ACGT 2 cut(s) 438, 1521
TatI WGTACW 5 cut(s) 883, 942, 976, 1774, 2326
TauI GCSGC 3 cut(s) 2072, 2122, 2204
Tru1I TTAA 6 cut(s) 888, 1059, 1250, 1380, 1779, 2502
Tru9I TTAA 6 cut(s) 888, 1059, 1250, 1380, 1779, 2502
TscAI CASTG 2 cut(s) 322, 886
TseFI GTSAC 4 cut(s) 194, 557, 1434, 1988
TseI GCWGC 7 cut(s) 213, 264, 722, 1103, 1333, 1652, 1920
Tsp45I GTSAC 4 cut(s) 194, 557, 1434, 1988
TspDTI ATGAA 7 cut(s) 389, 963, 1018, 1055, 1189, 1251, 1917
TspGWI ACGGA 4 cut(s) 455, 1440, 2284, 2592
TspRI CASTG 2 cut(s) 322, 886
Tth111I GACNNNGTC 2 cut(s) 563, 2294
Van91I CCANNNNNTGG 1 cut(s) 452
VneI GTGCAC 2 cut(s) 2432, 2454
VpaK11BI GGWCC 2 cut(s) 231, 1420
XapI RAATTY 4 cut(s) 688, 908, 1196, 1375
XbaI TCTAGA 2 cut(s) 1477, 1543
XceI RCATGY 1 cut(s) 1557
XcmI CCANNNNNNNNNTGG 1 cut(s) 1213
XhoI CTCGAG 1 cut(s) 1593
XmiI GTMKAC 3 cut(s) 1017, 1191, 1521
ZraI GACGTC 1 cut(s) 1519
ZrmI AGTACT 1 cut(s) 1776
Zsp2I ATGCAT 1 cut(s) 2465
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.