Prupe.1G395700_v2.0.a1

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
35124009 .. 35125932
1924 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G395700.1

Sequence Viewer

Length: 1818 bp
ATGAATAATAATTGCTACATCTGTCTCTTCATTTTCATCAATCTTCTGCCTATCTTTGCTCATCAAACCAATGTCAGACCTCCCCTTTCGTTCACCATACCTCAGTTCAACCTTGATACAGAGAACATACTCTATGAAGGTGATGCCACGCCTTCCTTAGGCATGGTAGAACTCAATACAGTCTCCCAATTGTTCCGCGTAGGGCGGTGTACCTATTCGCAACCTTTGCACCTATGGGACTCTGCTACCGGTTCACTAGCAGATTTCACAACCCATTTCACTTTCATGGTTGACACTCATAACAGTAGCAAATTCAGTGATGGGTTTGCCTTTTTCCTTGCTCCTGTTGGCTATCCAATTCCACCTAACTCTGCTGGTGGTAGTCTAGGATTGTTCAACAGCAGCACTAATTTTGCAGTGTCCAAAAACCAAATTGTAGCAGTTGAGTTTGATTCCTACACAAATATTGAGTGGGATCCAAATGGACCTCATGTTGGGATCAATGTAAACAAAATCTCCTCAATTGTTAACACCAGTTGGGTTTTTAGCAGCAACAGAAGGAAGGTGGCTAATGCATGGATAACTTATAATGCTACCACAAACGACCTCAGTGTGTTTTGGACATACAAGGAAAACCCAAATCCTACTTTTATTGACAGTTCGTTTTCGCTTTCTCACCGTGTTGACTTAAGAGAGGTTCTCCCCGAATGGGTTACTATTGGTTTTTCAGCTGCTACTGGAACAGCCCCTGAGCGGCATGTTATAAGTTATTGGGAATTCAAAGCACATTTGGATTCTGGTGAGATACGAAACAAACAAAAGGATACGAAAATGAAGAAGAAATATTTGATAGGAGGAATTGCTGCTTTTACTTTGTTAATTTTGATGATTGGTGTGGCCTTGTGTAGGTTGGATGTAAAGAAGCGAACAGTCAGGATTGGTGGACATGAAAATTACTCCAAGGATGTGACCTCCATAAATAAGGATCTTGAGAGACGAGCATTCCCTAAACGATTTTCTTATAAGGAATTAATTGCAGCCACCAATGGCTTTGCAAACACTGGAAGGCTAGGCCAAGGAGGGTCAGGACATGTTTATAAAGGAATCTTACAGGATCTAGGCTGTGCAATTGCTAAAATCTTCATCAATGAAGTCAAAATTATAAGCCGCTTAATACATAGAAACCTGGTGCAATTTATTGGATGGTGTCATAAGGAAGGCGAATGCTTACTTGTTTATGCATACATGCCTAACAGCAGCCTCGACACACATCTTTCGGATATAGCTTTAGGCTTGGCCTCTGCCCTTCGTTATCTACATGAAGATGCAGAGCAATGTGTTCTTCATAGGGATATCAAATCAGCTAACATATTGTTGGACAAAGACTTCAGCACTAAGCTCGGTGATTTTGGGATTGCAAAGCTTGTTGATCCATGGTCCAGGACTCAAATGATAGGGGCAGTAGGGACTTTTGGATACATAGCCCCAGAATATGTAAATGGAGGAAGGGCCAGTAAAGAGTGTGACATGTTTAGTTTTGGAGTTGTGGCCTTGGAAATTGCATGTGGAAGGAGGACTTACCAGGATGGAGAATTTCACGTGCCACTTGTCACTGATGAGAGATTGGATAAGATTTTTGATAAAAATGAAATGGAATGCTTGTTAATTGTGGGATTATGGTGCACTCATCCCAACAGCAAGGGAAGGCCAAGAGCTGGAAAAGTCATGAAGGTTCTTGAGCTTGAAGCACCATTGCCGGAACTTCCACATGACATGCATGAACTTGAGCATCATCTGTCTCATCATGATCTCATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

606

Amino Acids

67.77

Weight (kDa)

6.64

Isoelectric Point (pI)

33.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 5 cut(s) 588, 764, 1023, 1098, 1163
AccB7I CCANNNNNTGG 1 cut(s) 1715
AccBSI CCGCTC 1 cut(s) 754
AccII CGCG 1 cut(s) 198
AciI CCGC 4 cut(s) 196, 205, 754, 1168
AclWI GGATC 6 cut(s) 470, 483, 506, 993, 1122, 1424
AcsI RAATTY 3 cut(s) 311, 776, 1592
AcuI CTGAAG 1 cut(s) 1372
AcvI CACGTG 1 cut(s) 1600
AfaI GTAC 1 cut(s) 211
AfiI CCNNNNNNNGG 6 cut(s) 158, 494, 709, 753, 906, 1715
AflII CTTAAG 1 cut(s) 688
AflIII ACRYGT 2 cut(s) 1090, 1527
AgeI ACCGGT 1 cut(s) 248
AgsI TTSAA 4 cut(s) 109, 397, 781, 1745
AjnI CCWGG 3 cut(s) 1185, 1439, 1581
AluBI AGCT 7 cut(s) 731, 1286, 1364, 1399, 1423, 1715, 1741
AluI AGCT 7 cut(s) 731, 1286, 1364, 1399, 1423, 1715, 1741
Alw21I GWGCWC 1 cut(s) 1685
Alw26I GTCTC 4 cut(s) 29, 187, 988, 1803
Alw44I GTGCAC 1 cut(s) 1681
AlwI GGATC 6 cut(s) 470, 483, 506, 993, 1122, 1424
AlwNI CAGNNNCTG 1 cut(s) 749
AoxI GGCC 6 cut(s) 897, 1072, 1296, 1509, 1548, 1706
ApaLI GTGCAC 1 cut(s) 1681
ApeKI GCWGC 6 cut(s) 402, 549, 731, 863, 1037, 1257
ApoI RAATTY 3 cut(s) 311, 776, 1592
AseI ATTAAT 1 cut(s) 1031
AsiGI ACCGGT 1 cut(s) 248
AspS9I GGNCC 3 cut(s) 485, 1437, 1509
AsuHPI GGTGA 5 cut(s) 85, 152, 668, 812, 1415
AvaII GGWCC 2 cut(s) 485, 1437
AxyI CCTNAGG 1 cut(s) 157
BaeGI GKGCMC 1 cut(s) 1685
BamHI GGATCC 1 cut(s) 475
BbrPI CACGTG 1 cut(s) 1600
Bbv12I GWGCWC 1 cut(s) 1685
BbvI GCAGC 6 cut(s) 414, 561, 718, 850, 1049, 1269
BccI CCATC 3 cut(s) 314, 1197, 1580
BcgI CGANNNNNNTGC 2 cut(s) 1381, 1415
BciT130I CCWGG 3 cut(s) 1187, 1441, 1583
BciVI GTATCC 2 cut(s) 817, 1469
BcoDI GTCTC 4 cut(s) 29, 187, 988, 1803
BfaI CTAG 4 cut(s) 257, 386, 1070, 1118
BfrI CTTAAG 1 cut(s) 688
BfuI GTATCC 2 cut(s) 817, 1469
BisI GCNGC 8 cut(s) 403, 550, 732, 755, 864, 1038, 1168, 1258
BlsI GCNGC 8 cut(s) 404, 551, 733, 756, 865, 1039, 1169, 1259
Bme1390I CCNGG 3 cut(s) 1187, 1441, 1583
Bme18I GGWCC 2 cut(s) 485, 1437
BmgT120I GGNCC 3 cut(s) 485, 1437, 1509
BmiI GGNNCC 1 cut(s) 477
BmrFI CCNGG 3 cut(s) 1187, 1441, 1583
BmsI GCATC 3 cut(s) 133, 1315, 1798
BplI GAGNNNNNCTC 2 cut(s) 684, 716
Bpu10I CCTNAGC 1 cut(s) 750
BpuEI CTTGAG 3 cut(s) 1010, 1757, 1805
BsaAI YACGTR 1 cut(s) 1600
BsaJI CCNNGG 4 cut(s) 960, 1075, 1433, 1551
BsaWI WCCGGW 1 cut(s) 248
BsaXI ACNNNNNCTCC 2 cut(s) 500, 530
Bsc4I CCNNNNNNNGG 6 cut(s) 158, 494, 709, 753, 906, 1715
Bse118I RCCGGY 1 cut(s) 248
Bse1I ACTGG 4 cut(s) 534, 742, 1066, 1512
Bse21I CCTNAGG 1 cut(s) 157
Bse3DI GCAATG 2 cut(s) 1340, 1751
BseBI CCWGG 3 cut(s) 1187, 1441, 1583
BseDI CCNNGG 4 cut(s) 960, 1075, 1433, 1551
BseGI GGATG 5 cut(s) 919, 970, 1208, 1591, 1687
BseLI CCNNNNNNNGG 6 cut(s) 158, 494, 709, 753, 906, 1715
BseMI GCAATG 2 cut(s) 1340, 1751
BseMII CTCAG 3 cut(s) 116, 622, 741
BseNI ACTGG 4 cut(s) 534, 742, 1066, 1512
BseRI GAGGAG 1 cut(s) 508
BseSI GKGCMC 1 cut(s) 1685
BseXI GCAGC 6 cut(s) 414, 561, 718, 850, 1049, 1269
Bsh1236I CGCG 1 cut(s) 198
BshFI GGCC 6 cut(s) 899, 1074, 1298, 1511, 1550, 1708
BshTI ACCGGT 1 cut(s) 248
BsiHKAI GWGCWC 1 cut(s) 1685
BsiSI CCGG 2 cut(s) 249, 1757
BslFI GGGAC 2 cut(s) 251, 1480
BslI CCNNNNNNNGG 6 cut(s) 158, 494, 709, 753, 906, 1715
BsmAI GTCTC 4 cut(s) 29, 187, 988, 1803
BsmBI CGTCTC 1 cut(s) 988
BsmFI GGGAC 2 cut(s) 251, 1480
BsmI GAATGC 3 cut(s) 1001, 1229, 1661
BsnI GGCC 6 cut(s) 899, 1074, 1298, 1511, 1550, 1708
Bsp1286I GDGCHC 1 cut(s) 1685
Bsp143I GATC 6 cut(s) 475, 498, 985, 1114, 1429, 1807
Bsp19I CCATGG 1 cut(s) 1433
BspACI CCGC 4 cut(s) 196, 205, 754, 1168
BspANI GGCC 6 cut(s) 899, 1074, 1298, 1511, 1550, 1708
BspCNI CTCAG 3 cut(s) 115, 621, 742
BspFNI CGCG 1 cut(s) 198
BspHI TCATGA 2 cut(s) 1725, 1804
BspLI GGNNCC 1 cut(s) 477
BspPI GGATC 6 cut(s) 470, 483, 506, 993, 1122, 1424
BspTI CTTAAG 1 cut(s) 688
BsrBI CCGCTC 1 cut(s) 754
BsrDI GCAATG 2 cut(s) 1340, 1751
BsrFI RCCGGY 1 cut(s) 248
BsrI ACTGG 4 cut(s) 534, 742, 1066, 1512
BssAI RCCGGY 1 cut(s) 248
BssECI CCNNGG 4 cut(s) 960, 1075, 1433, 1551
BssMI GATC 6 cut(s) 475, 498, 985, 1114, 1429, 1807
BssT1I CCWWGG 4 cut(s) 960, 1075, 1433, 1551
Bst2UI CCWGG 3 cut(s) 1187, 1441, 1583
Bst4CI ACNGT 5 cut(s) 181, 305, 659, 680, 931
Bst6I CTCTTC 1 cut(s) 32
BstAFI CTTAAG 1 cut(s) 688
BstAPI GCANNNNNTGC 1 cut(s) 226
BstBAI YACGTR 1 cut(s) 1600
BstDEI CTNAG 5 cut(s) 102, 157, 608, 750, 1395
BstDSI CCRYGG 1 cut(s) 1433
BstENI CCTNNNNNAGG 2 cut(s) 156, 904
BstF5I GGATG 5 cut(s) 919, 970, 1208, 1591, 1687
BstFNI CGCG 1 cut(s) 198
BstKTI GATC 6 cut(s) 478, 501, 988, 1117, 1432, 1810
BstMAI GTCTC 4 cut(s) 29, 187, 988, 1803
BstMBI GATC 6 cut(s) 475, 498, 985, 1114, 1429, 1807
BstMWI GCNNNNNNNGC 1 cut(s) 226
BstNI CCWGG 3 cut(s) 1187, 1441, 1583
BstNSI RCATGY 6 cut(s) 761, 1094, 1249, 1531, 1566, 1777
BstSCI CCNGG 3 cut(s) 1185, 1439, 1581
BstSLI GKGCMC 1 cut(s) 1685
BstUI CGCG 1 cut(s) 198
BstV1I GCAGC 6 cut(s) 414, 561, 718, 850, 1049, 1269
BstX2I RGATCY 3 cut(s) 475, 985, 1114
BstYI RGATCY 3 cut(s) 475, 985, 1114
Bsu36I CCTNAGG 1 cut(s) 157
BsuI GTATCC 2 cut(s) 817, 1469
BsuRI GGCC 6 cut(s) 899, 1074, 1298, 1511, 1550, 1708
BtgI CCRYGG 1 cut(s) 1433
BtsCI GGATG 5 cut(s) 919, 970, 1208, 1591, 1687
BtsI GCAGTG 1 cut(s) 423
BtsIMutI CAGTG 5 cut(s) 322, 423, 616, 1059, 1611
CaiI CAGNNNCTG 1 cut(s) 749
CciI TCATGA 2 cut(s) 1725, 1804
Cfr10I RCCGGY 1 cut(s) 248
Cfr13I GGNCC 3 cut(s) 485, 1437, 1509
CsiI ACCWGGT 1 cut(s) 1185
Csp6I GTAC 1 cut(s) 210
CspAI ACCGGT 1 cut(s) 248
CviQI GTAC 1 cut(s) 210
DdeI CTNAG 5 cut(s) 102, 157, 608, 750, 1395
DpnI GATC 6 cut(s) 477, 500, 987, 1116, 1431, 1809
DpnII GATC 6 cut(s) 475, 498, 985, 1114, 1429, 1807
Eam1104I CTCTTC 1 cut(s) 32
EarI CTCTTC 1 cut(s) 32
Eco130I CCWWGG 4 cut(s) 960, 1075, 1433, 1551
Eco32I GATATC 1 cut(s) 1354
Eco47I GGWCC 2 cut(s) 485, 1437
Eco57I CTGAAG 1 cut(s) 1372
Eco72I CACGTG 1 cut(s) 1600
Eco81I CCTNAGG 1 cut(s) 157
EcoNI CCTNNNNNAGG 2 cut(s) 156, 904
EcoRI GAATTC 1 cut(s) 776
EcoRII CCWGG 3 cut(s) 1185, 1439, 1581
EcoRV GATATC 1 cut(s) 1354
EcoT14I CCWWGG 4 cut(s) 960, 1075, 1433, 1551
EcoT22I ATGCAT 3 cut(s) 577, 1243, 1779
ErhI CCWWGG 4 cut(s) 960, 1075, 1433, 1551
Esp3I CGTCTC 1 cut(s) 988
FalI AAGNNNNNCTT 2 cut(s) 1561, 1593
FaqI GGGAC 2 cut(s) 251, 1480
FauNDI CATATG 1 cut(s) 1814
Fnu4HI GCNGC 8 cut(s) 403, 550, 732, 755, 864, 1038, 1168, 1258
FokI GGATG 5 cut(s) 926, 977, 1215, 1598, 1674
Fsp4HI GCNGC 8 cut(s) 403, 550, 732, 755, 864, 1038, 1168, 1258
FspBI CTAG 4 cut(s) 257, 386, 1070, 1118
GluI GCNGC 8 cut(s) 403, 550, 732, 755, 864, 1038, 1168, 1258
HaeIII GGCC 6 cut(s) 899, 1074, 1298, 1511, 1550, 1708
HapII CCGG 2 cut(s) 249, 1757
HincII GTYRAC 3 cut(s) 292, 529, 685
HindII GTYRAC 3 cut(s) 292, 529, 685
HindIII AAGCTT 1 cut(s) 1421
HinfI GANTC 5 cut(s) 239, 452, 794, 1104, 1444
HpaI GTTAAC 1 cut(s) 529
HpaII CCGG 2 cut(s) 249, 1757
HphI GGTGA 5 cut(s) 85, 152, 668, 812, 1415
Hpy166II GTNNAC 9 cut(s) 93, 210, 254, 292, 508, 529, 685, 944, 1683
Hpy188I TCNGA 2 cut(s) 77, 1279
Hpy188III TCNNGA 6 cut(s) 934, 989, 1086, 1726, 1736, 1805
Hpy8I GTNNAC 9 cut(s) 93, 210, 254, 292, 508, 529, 685, 944, 1683
HpyCH4III ACNGT 5 cut(s) 181, 305, 659, 680, 931
HpyCH4IV ACGT 1 cut(s) 1599
HpyF10VI GCNNNNNNNGC 1 cut(s) 226
HpyF3I CTNAG 5 cut(s) 102, 157, 608, 750, 1395
HpySE526I ACGT 1 cut(s) 1599
KspAI GTTAAC 1 cut(s) 529
Kzo9I GATC 6 cut(s) 475, 498, 985, 1114, 1429, 1807
LmnI GCTCC 1 cut(s) 346
Lsp1109I GCAGC 6 cut(s) 414, 561, 718, 850, 1049, 1269
LweI GCATC 3 cut(s) 133, 1315, 1798
MabI ACCWGGT 1 cut(s) 1185
MaeI CTAG 4 cut(s) 257, 386, 1070, 1118
MaeII ACGT 1 cut(s) 1599
MaeIII GTNAC 4 cut(s) 712, 967, 1523, 1609
MalI GATC 6 cut(s) 477, 500, 987, 1116, 1431, 1809
MbiI CCGCTC 1 cut(s) 754
MboI GATC 6 cut(s) 475, 498, 985, 1114, 1429, 1807
MboII GAAGA 7 cut(s) 19, 35, 847, 850, 1132, 1334, 1334
MfeI CAATTG 3 cut(s) 188, 522, 1128
MflI RGATCY 3 cut(s) 475, 985, 1114
MhlI GDGCHC 1 cut(s) 1685
MlyI GAGTC 2 cut(s) 233, 1438
MmeI TCCRAC 2 cut(s) 891, 1356
Mph1103I ATGCAT 3 cut(s) 577, 1243, 1779
MseI TTAA 6 cut(s) 528, 689, 878, 1031, 1172, 1664
MslI CAYNNNNRTG 2 cut(s) 284, 1323
MspA1I CMGCKG 1 cut(s) 731
MspCI CTTAAG 1 cut(s) 688
MspI CCGG 2 cut(s) 249, 1757
MspR9I CCNGG 3 cut(s) 1187, 1441, 1583
MunI CAATTG 3 cut(s) 188, 522, 1128
Mva1269I GAATGC 3 cut(s) 1001, 1229, 1661
MvaI CCWGG 3 cut(s) 1187, 1441, 1583
MvnI CGCG 1 cut(s) 198
MwoI GCNNNNNNNGC 1 cut(s) 226
NcoI CCATGG 1 cut(s) 1433
NdeI CATATG 1 cut(s) 1814
NdeII GATC 6 cut(s) 475, 498, 985, 1114, 1429, 1807
NlaIV GGNNCC 1 cut(s) 477
NmuCI GTSAC 3 cut(s) 967, 1523, 1609
NsiI ATGCAT 3 cut(s) 577, 1243, 1779
NspI RCATGY 6 cut(s) 761, 1094, 1249, 1531, 1566, 1777
PagI TCATGA 2 cut(s) 1725, 1804
PciI ACATGT 2 cut(s) 1090, 1527
PctI GAATGC 3 cut(s) 1001, 1229, 1661
PfeI GAWTC 3 cut(s) 452, 794, 1104
PflMI CCANNNNNTGG 1 cut(s) 1715
PfoI TCCNGGA 1 cut(s) 1439
PinAI ACCGGT 1 cut(s) 248
PkrI GCNGC 8 cut(s) 404, 551, 733, 756, 865, 1039, 1169, 1259
PleI GAGTC 2 cut(s) 233, 1438
PmaCI CACGTG 1 cut(s) 1600
PmlI CACGTG 1 cut(s) 1600
PpsI GAGTC 2 cut(s) 233, 1438
Ppu21I YACGTR 1 cut(s) 1600
PscI ACATGT 2 cut(s) 1090, 1527
PshBI ATTAAT 1 cut(s) 1031
PsiI TTATAA 5 cut(s) 588, 764, 1023, 1098, 1163
Psp6I CCWGG 3 cut(s) 1185, 1439, 1581
PspCI CACGTG 1 cut(s) 1600
PspGI CCWGG 3 cut(s) 1185, 1439, 1581
PspN4I GGNNCC 1 cut(s) 477
PspPI GGNCC 3 cut(s) 485, 1437, 1509
PstNI CAGNNNCTG 1 cut(s) 749
PsuI RGATCY 3 cut(s) 475, 985, 1114
PvuII CAGCTG 1 cut(s) 731
RsaI GTAC 1 cut(s) 211
RsaNI GTAC 1 cut(s) 210
RseI CAYNNNNRTG 2 cut(s) 284, 1323
SaqAI TTAA 6 cut(s) 528, 689, 878, 1031, 1172, 1664
SatI GCNGC 8 cut(s) 403, 550, 732, 755, 864, 1038, 1168, 1258
Sau3AI GATC 6 cut(s) 475, 498, 985, 1114, 1429, 1807
Sau96I GGNCC 3 cut(s) 485, 1437, 1509
SchI GAGTC 2 cut(s) 233, 1438
ScrFI CCNGG 3 cut(s) 1187, 1441, 1583
SduI GDGCHC 1 cut(s) 1685
SexAI ACCWGGT 1 cut(s) 1185
SfaNI GCATC 3 cut(s) 133, 1315, 1798
SinI GGWCC 2 cut(s) 485, 1437
SmiMI CAYNNNNRTG 2 cut(s) 284, 1323
SmlI CTYRAG 4 cut(s) 688, 989, 1736, 1784
SmoI CTYRAG 4 cut(s) 688, 989, 1736, 1784
SsiI CCGC 4 cut(s) 196, 205, 754, 1168
SspI AATATT 2 cut(s) 466, 845
SspMI CTAG 4 cut(s) 257, 386, 1070, 1118
StyD4I CCNGG 3 cut(s) 1185, 1439, 1581
StyI CCWWGG 4 cut(s) 960, 1075, 1433, 1551
TaaI ACNGT 5 cut(s) 181, 305, 659, 680, 931
TaiI ACGT 1 cut(s) 1602
TaqI TCGA 1 cut(s) 1263
TauI GCSGC 2 cut(s) 757, 1170
TfiI GAWTC 3 cut(s) 452, 794, 1104
Tru1I TTAA 6 cut(s) 528, 689, 878, 1031, 1172, 1664
Tru9I TTAA 6 cut(s) 528, 689, 878, 1031, 1172, 1664
TscAI CASTG 5 cut(s) 322, 423, 616, 1066, 1618
TseFI GTSAC 3 cut(s) 967, 1523, 1609
TseI GCWGC 6 cut(s) 402, 549, 731, 863, 1037, 1257
Tsp45I GTSAC 3 cut(s) 967, 1523, 1609
TspRI CASTG 5 cut(s) 322, 423, 616, 1066, 1618
Van91I CCANNNNNTGG 1 cut(s) 1715
Vha464I CTTAAG 1 cut(s) 688
VneI GTGCAC 1 cut(s) 1681
VpaK11BI GGWCC 2 cut(s) 485, 1437
VspI ATTAAT 1 cut(s) 1031
XagI CCTNNNNNAGG 2 cut(s) 156, 904
XapI RAATTY 3 cut(s) 311, 776, 1592
XceI RCATGY 6 cut(s) 761, 1094, 1249, 1531, 1566, 1777
XspI CTAG 4 cut(s) 257, 386, 1070, 1118
Zsp2I ATGCAT 3 cut(s) 577, 1243, 1779
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.