FvH4_5g13890

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
7841662 .. 7844073
2412 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g13890.t1

Sequence Viewer

Length: 2127 bp
ATGGCTGTAATTAACAGGCTCCGGTTGTCCCTAAACCAGTTTCAATTGCTTCTTCTTCTCTCATTACTGTTGCCCTTCTTTGCAACTTCATTGACCTTCAATTTTTCCAGCTTTCCCCCTGACGTTGCCAATATATCAATGGAGGGAAATGCTCATCCCGATGGCTCTCTCCGCCTCACCAATAGTGCTCTTGACCAGAACCTAAATTACAGCACCGGTAGAGCCACCTACAAAGAGACCTTCCTCCTCAGACAAAACTCCACCGGAAAACTCGCTGATTTCACGTCAAGTTTCACGTTCGCCATTCAGTCCGACGGAAGAAGCAACTTCCCAGCTGATGGGCTGGCATTCTTCCTAGCGCCGGCAGGGTCCTCACTGGACAGCATATTAGGGCAAGGTTGCAGTCTTGGCCTCCCTGTCAACAACTCGCTGGAAAACTATACCAAGTCAGGTATTTTGTACTTTGAATACCCGTTTGTCGCCGTTGAATTTGATATCTTCCTCAACGTAGACTCAGGTAATAGATCGATTGATTTGGGTCTAAATTACACTCATGTGGGCATCGACATCAACTCCCTCAAGTCGAACGTCACCGCGCCGTGGGATGGTGGGAATATTACCACTGGAGGAAAAAACAATGCCACGATTAGTTACAACTCCACCTCCAAGAATCTTAGTGTTGCATTCACAACGATTCAAAACGAGGTCCAGGTTATCAGAAATATTGATTTCTCAGTTGATCTGCTCCAATACTTGCCCGATAAAGTCATCGTTGGTTTCTCGGCTTCAACGGGTCAACAATTTGCTCTGCATAGGATCATTTCTTGGAGCTTTGATTCAACTTCATTGGCAGACGAAAACATCACATCAACTCTTCCTGCGCCAAAGTCAGGAAATGCCAATGTTGGACTAGTAGTTGGGTTGGCTGTTGGGGGAGGTGTTATCTTGGTTGGTGTGTTAGGTTTCGTGTTCCTCTTCTGCAGGAAGAGGAGGGAAACAACTGGGGAAAGTACTGATGATGATACTAGGGTACTTCATGATTTGGATCCTGAAGAATTCGAAAAGGGGACAGGCCCTAGGAAATTCTCCTACAATGAATTGGCCCTTGCAACTAATAATTTTGCGCAGGGAGAAAAGCTTGGGGAGGGAGGCTTTGGTGGAGTTTACAAGGGCTTCATCAAAGACATGAACGCGTATGTAGCTGTTAAGAAGATATCAAGGGGGTCTAAACAAGGGTTGAAGGAGTATGCAGCAGAAGTGAGTATCATTAGTCGACTCAGGCATCGGAATCTGGTGCAACTCATCGGTTGGTGCCATGAAAAGAAACTCCTACTTGTCTACGAATTCATGCCCAACAGTAGCTTGGATTCTCATTTGTACAAAGAAAAAAGCTTGTTAACTTGGGAGGTAAGATTCAAAATTGCACATGGATTGGCATCAGGGTTGCTTTATCTACACCAAGGATGGGAACAATGTGTGCTTCACAGAGATATCAAATCCAGCAATGTTATGTTGGATGCAAATTTTAACGCGAAACTTGGAGATTTTGGTTTAGCCAAACTTGTCGACCATGGAAAGCTATCTCAAACAACAGTTGTGGCCGGAACCATGGGCTACATGGCAACGGAATATGTTGCAACGGGAAAGGCTAGCAAGGAAACAGACGTCTACAGTTTCGGGGTAGTTGCTTTGGAAATAGCTTGCGGGAGAAAACCCATTGATACCAGGTATGAAGAGAAGCAAATGAAAATGAATATGGTGGAGTGGGTATGGGAGCTCTATGGAGAAGGGAAAATTATTGAAGCAGCCGACCCAAAATTGTGCGGGGAGTTTGATGAGAAGCAAATGGAGTGCTTAATGATTGTAGGGTTATGGTGTGCTCATCCGGATCACAACTCTAGGCCATTGATACAACAAGCAATCCAAGTGCTTAACTTCGAAGTTCCACTGCCTAATCTCCCATTGAATATGCCGGTGGCCTTTTTTCCTCGGTTATCACTCTCGATTTTGTATAGAGGTGACACTACTAGTGGTCAAAGTGAGTCTTCAGGGTATGGTTCTACCATCAACTCCTCACAGTTCATCTCATCTTCGACCTCAAATTCGAATCCAACAGCAGCTTCTTAG

Protein Analysis

709

Amino Acids

77.62

Weight (kDa)

5.79

Isoelectric Point (pI)

28.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 31 - 292 1e-56 Legume lectin domain
Lectin_L-type_dom PF18483 45 - 273 1e-07 Legume lectin beta-barrel domain
Pkinase PF00069 375 - 642 6.4e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 376 - 581 1.5e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1668
Acc16I TGCGCA 1 cut(s) 1125
AccB1I GGYRCC 1 cut(s) 1311
AccB7I CCANNNNNTGG 1 cut(s) 338
AccI GTMKAC 5 cut(s) 510, 1273, 1338, 1566, 1668
AccII CGCG 3 cut(s) 596, 1193, 1532
AccIII TCCGGA 1 cut(s) 1885
AciI CCGC 4 cut(s) 172, 594, 1704, 1824
AclWI GGATC 4 cut(s) 824, 1040, 1053, 1896
AcoI YGGCCR 1 cut(s) 1599
AcsI RAATTY 6 cut(s) 488, 1055, 1082, 1343, 1522, 2101
AcuI CTGAAG 2 cut(s) 1071, 2031
AcyI GRCGYC 1 cut(s) 1665
AfaI GTAC 4 cut(s) 461, 1012, 1032, 1379
AfiI CCNNNNNNNGG 6 cut(s) 338, 361, 600, 605, 890, 1465
AflIII ACRYGT 1 cut(s) 1191
AgeI ACCGGT 1 cut(s) 215
AhlI ACTAGT 2 cut(s) 910, 2027
AjiI CACGTC 1 cut(s) 285
AjnI CCWGG 2 cut(s) 708, 1724
AjuI GAANNNNNNNTTGG 1 cut(s) 2104
AleI CACNNNNGTG 1 cut(s) 554
Alw21I GWGCWC 3 cut(s) 190, 1779, 1882
Alw26I GTCTC 1 cut(s) 230
AlwI GGATC 4 cut(s) 824, 1040, 1053, 1896
Aor13HI TCCGGA 1 cut(s) 1885
AoxI GGCC 6 cut(s) 409, 1072, 1101, 1599, 1901, 1977
ApeKI GCWGC 3 cut(s) 1250, 1805, 2117
ApoI RAATTY 6 cut(s) 488, 1055, 1082, 1343, 1522, 2101
ArsI GACNNNNNNTTYG 2 cut(s) 2086, 2118
AsiGI ACCGGT 1 cut(s) 215
AspA2I CCTAGG 1 cut(s) 1076
AspLEI GCGC 4 cut(s) 361, 598, 883, 1126
AspS9I GGNCC 4 cut(s) 369, 706, 1073, 1102
AsuHPI GGTGA 3 cut(s) 169, 583, 2030
AsuII TTCGAA 3 cut(s) 1059, 1938, 2105
AsuNHI GCTAGC 1 cut(s) 1649
AvaII GGWCC 2 cut(s) 369, 706
AvrII CCTAGG 1 cut(s) 1076
BaeI ACNNNNGTAYC 2 cut(s) 1014, 1047
BamHI GGATCC 1 cut(s) 1045
BanI GGYRCC 1 cut(s) 1311
BanII GRGCYC 1 cut(s) 1779
BbsI GAAGAC 1 cut(s) 2037
Bbv12I GWGCWC 3 cut(s) 190, 1779, 1882
BbvI GCAGC 2 cut(s) 1262, 1817
BccI CCATC 5 cut(s) 155, 332, 599, 1458, 2072
BceAI ACGGC 2 cut(s) 467, 583
BciT130I CCWGG 2 cut(s) 710, 1726
BcoDI GTCTC 1 cut(s) 230
BcuI ACTAGT 2 cut(s) 910, 2027
BfaI CTAG 7 cut(s) 356, 911, 1026, 1077, 1650, 1899, 2028
BfmI CTRYAG 2 cut(s) 979, 1669
BfoI RGCGCY 1 cut(s) 362
BisI GCNGC 3 cut(s) 1251, 1806, 2118
BlnI CCTAGG 1 cut(s) 1076
BlsI GCNGC 3 cut(s) 1252, 1807, 2119
BmcAI AGTACT 1 cut(s) 1012
Bme1390I CCNGG 2 cut(s) 710, 1726
Bme18I GGWCC 2 cut(s) 369, 706
BmgBI CACGTC 1 cut(s) 285
BmgT120I GGNCC 4 cut(s) 369, 706, 1073, 1102
BmiI GGNNCC 5 cut(s) 20, 370, 1047, 1313, 1606
BmrFI CCNGG 2 cut(s) 710, 1726
BmrI ACTGGG 1 cut(s) 1011
BmsI GCATC 4 cut(s) 570, 1291, 1445, 1507
BmtI GCTAGC 1 cut(s) 1653
BmuI ACTGGG 1 cut(s) 1011
BpiI GAAGAC 1 cut(s) 2037
BpmI CTGGAG 1 cut(s) 645
Bpu14I TTCGAA 3 cut(s) 1059, 1938, 2105
BpuEI CTTGAG 1 cut(s) 563
Bsa29I ATCGAT 1 cut(s) 527
BsaBI GATNNNNATC 2 cut(s) 1044, 1435
BsaHI GRCGYC 1 cut(s) 1665
BsaI GGTCTC 1 cut(s) 230
BsaJI CCNNGG 6 cut(s) 599, 1076, 1459, 1570, 1608, 1988
BsaWI WCCGGW 4 cut(s) 21, 215, 263, 1885
BsaXI ACNNNNNCTCC 4 cut(s) 557, 587, 647, 677
Bsc4I CCNNNNNNNGG 6 cut(s) 338, 361, 600, 605, 890, 1465
Bse118I RCCGGY 3 cut(s) 215, 361, 1972
Bse1I ACTGG 4 cut(s) 37, 381, 628, 1006
Bse3DI GCAATG 1 cut(s) 1510
Bse8I GATNNNNATC 2 cut(s) 1044, 1435
BseAI TCCGGA 1 cut(s) 1885
BseBI CCWGG 2 cut(s) 710, 1726
BseCI ATCGAT 1 cut(s) 527
BseDI CCNNGG 6 cut(s) 599, 1076, 1459, 1570, 1608, 1988
BseGI GGATG 5 cut(s) 154, 610, 1469, 1522, 1882
BseJI GATNNNNATC 2 cut(s) 1044, 1435
BseLI CCNNNNNNNGG 6 cut(s) 338, 361, 600, 605, 890, 1465
BseMI GCAATG 1 cut(s) 1510
BseMII CTCAG 4 cut(s) 262, 528, 747, 1291
BseNI ACTGG 4 cut(s) 37, 381, 628, 1006
BseRI GAGGAG 3 cut(s) 236, 1003, 2062
BseXI GCAGC 2 cut(s) 1262, 1817
BseYI CCCAGC 1 cut(s) 331
Bsh1236I CGCG 3 cut(s) 596, 1193, 1532
BshFI GGCC 6 cut(s) 411, 1074, 1103, 1601, 1903, 1979
BshNI GGYRCC 1 cut(s) 1311
BshTI ACCGGT 1 cut(s) 215
BshVI ATCGAT 1 cut(s) 527
BsiHKAI GWGCWC 3 cut(s) 190, 1779, 1882
BsiSI CCGG 7 cut(s) 22, 216, 264, 362, 1602, 1886, 1973
BslFI GGGAC 2 cut(s) 13, 1081
BslI CCNNNNNNNGG 6 cut(s) 338, 361, 600, 605, 890, 1465
BsmAI GTCTC 1 cut(s) 230
BsmFI GGGAC 2 cut(s) 13, 1081
BsmI GAATGC 2 cut(s) 347, 683
BsnI GGCC 6 cut(s) 411, 1074, 1103, 1601, 1903, 1979
Bso31I GGTCTC 1 cut(s) 230
Bsp119I TTCGAA 3 cut(s) 1059, 1938, 2105
Bsp1286I GDGCHC 3 cut(s) 190, 1779, 1882
Bsp13I TCCGGA 1 cut(s) 1885
Bsp1407I TGTACA 1 cut(s) 1377
Bsp143I GATC 5 cut(s) 524, 739, 816, 1045, 1888
Bsp19I CCATGG 2 cut(s) 1570, 1608
BspACI CCGC 4 cut(s) 172, 594, 1704, 1824
BspANI GGCC 6 cut(s) 411, 1074, 1103, 1601, 1903, 1979
BspCNI CTCAG 4 cut(s) 261, 527, 746, 1290
BspDI ATCGAT 1 cut(s) 527
BspEI TCCGGA 1 cut(s) 1885
BspFNI CGCG 3 cut(s) 596, 1193, 1532
BspHI TCATGA 1 cut(s) 1036
BspLI GGNNCC 5 cut(s) 20, 370, 1047, 1313, 1606
BspMAI CTGCAG 1 cut(s) 983
BspOI GCTAGC 1 cut(s) 1653
BspPI GGATC 4 cut(s) 824, 1040, 1053, 1896
BspT104I TTCGAA 3 cut(s) 1059, 1938, 2105
BspT107I GGYRCC 1 cut(s) 1311
BspTNI GGTCTC 1 cut(s) 230
BsrDI GCAATG 1 cut(s) 1510
BsrFI RCCGGY 3 cut(s) 215, 361, 1972
BsrGI TGTACA 1 cut(s) 1377
BsrI ACTGG 4 cut(s) 37, 381, 628, 1006
BssAI RCCGGY 3 cut(s) 215, 361, 1972
BssECI CCNNGG 6 cut(s) 599, 1076, 1459, 1570, 1608, 1988
BssMI GATC 5 cut(s) 524, 739, 816, 1045, 1888
BssNI GRCGYC 1 cut(s) 1665
BssT1I CCWWGG 4 cut(s) 1076, 1459, 1570, 1608
Bst2UI CCWGG 2 cut(s) 710, 1726
Bst4CI ACNGT 5 cut(s) 69, 1358, 1594, 1673, 2079
Bst6I CTCTTC 4 cut(s) 879, 980, 980, 1728
BstACI GRCGYC 1 cut(s) 1665
BstAUI TGTACA 1 cut(s) 1377
BstBI TTCGAA 3 cut(s) 1059, 1938, 2105
BstC8I GCNNGC 4 cut(s) 345, 363, 1651, 1702
BstDEI CTNAG 6 cut(s) 248, 514, 674, 733, 1277, 2124
BstDSI CCRYGG 3 cut(s) 599, 1570, 1608
BstF5I GGATG 5 cut(s) 154, 610, 1469, 1522, 1882
BstFNI CGCG 3 cut(s) 596, 1193, 1532
BstH2I RGCGCY 1 cut(s) 362
BstHHI GCGC 4 cut(s) 361, 598, 883, 1126
BstKTI GATC 5 cut(s) 527, 742, 819, 1048, 1891
BstMAI GTCTC 1 cut(s) 230
BstMBI GATC 5 cut(s) 524, 739, 816, 1045, 1888
BstMWI GCNNNNNNNGC 3 cut(s) 171, 408, 1199
BstNI CCWGG 2 cut(s) 710, 1726
BstSCI CCNGG 2 cut(s) 708, 1724
BstSFI CTRYAG 2 cut(s) 979, 1669
BstUI CGCG 3 cut(s) 596, 1193, 1532
BstV1I GCAGC 2 cut(s) 1262, 1817
BstV2I GAAGAC 1 cut(s) 2037
BstX2I RGATCY 1 cut(s) 1045
BstYI RGATCY 1 cut(s) 1045
Bsu15I ATCGAT 1 cut(s) 527
BsuRI GGCC 6 cut(s) 411, 1074, 1103, 1601, 1903, 1979
BsuTUI ATCGAT 1 cut(s) 527
BtgI CCRYGG 3 cut(s) 599, 1570, 1608
BtrI CACGTC 1 cut(s) 285
BtsCI GGATG 5 cut(s) 154, 610, 1469, 1522, 1882
BtsI GCAGTG 1 cut(s) 1946
BtsIMutI CAGTG 3 cut(s) 374, 621, 1946
Cac8I GCNNGC 4 cut(s) 345, 363, 1651, 1702
CciI TCATGA 1 cut(s) 1036
CfoI GCGC 4 cut(s) 361, 598, 883, 1126
Cfr10I RCCGGY 3 cut(s) 215, 361, 1972
Cfr13I GGNCC 4 cut(s) 369, 706, 1073, 1102
ClaI ATCGAT 1 cut(s) 527
CsiI ACCWGGT 1 cut(s) 1724
Csp6I GTAC 4 cut(s) 460, 1011, 1031, 1378
CspAI ACCGGT 1 cut(s) 215
CspCI CAANNNNNGTGG 2 cut(s) 1578, 1613
CviAII CATG 9 cut(s) 554, 1037, 1186, 1316, 1348, 1427, 1571, 1609, 1618
CviQI GTAC 4 cut(s) 460, 1011, 1031, 1378
DdeI CTNAG 6 cut(s) 248, 514, 674, 733, 1277, 2124
DpnI GATC 5 cut(s) 526, 741, 818, 1047, 1890
DpnII GATC 5 cut(s) 524, 739, 816, 1045, 1888
EaeI YGGCCR 1 cut(s) 1599
Eam1104I CTCTTC 4 cut(s) 879, 980, 980, 1728
EarI CTCTTC 4 cut(s) 879, 980, 980, 1728
EciI GGCGGA 1 cut(s) 161
Ecl136II GAGCTC 1 cut(s) 1777
Eco130I CCWWGG 4 cut(s) 1076, 1459, 1570, 1608
Eco24I GRGCYC 1 cut(s) 1779
Eco31I GGTCTC 1 cut(s) 230
Eco32I GATATC 3 cut(s) 496, 1215, 1492
Eco47I GGWCC 2 cut(s) 369, 706
Eco53kI GAGCTC 1 cut(s) 1777
Eco57I CTGAAG 2 cut(s) 1071, 2031
EcoICRI GAGCTC 1 cut(s) 1777
EcoO109I RGGNCCY 2 cut(s) 369, 1073
EcoRI GAATTC 2 cut(s) 1055, 1343
EcoRII CCWGG 2 cut(s) 708, 1724
EcoRV GATATC 3 cut(s) 496, 1215, 1492
EcoT14I CCWWGG 4 cut(s) 1076, 1459, 1570, 1608
EcoT38I GRGCYC 1 cut(s) 1779
ErhI CCWWGG 4 cut(s) 1076, 1459, 1570, 1608
FaeI CATG 9 cut(s) 557, 1040, 1189, 1319, 1351, 1430, 1574, 1612, 1621
FalI AAGNNNNNCTT 2 cut(s) 2029, 2061
FaqI GGGAC 2 cut(s) 13, 1081
FatI CATG 9 cut(s) 553, 1036, 1185, 1315, 1347, 1426, 1570, 1608, 1617
FauI CCCGC 2 cut(s) 1697, 1817
FblI GTMKAC 5 cut(s) 510, 1273, 1338, 1566, 1668
Fnu4HI GCNGC 3 cut(s) 1251, 1806, 2118
FokI GGATG 5 cut(s) 141, 617, 1476, 1529, 1869
FriOI GRGCYC 1 cut(s) 1779
Fsp4HI GCNGC 3 cut(s) 1251, 1806, 2118
FspBI CTAG 7 cut(s) 356, 911, 1026, 1077, 1650, 1899, 2028
FspI TGCGCA 1 cut(s) 1125
GlaI GCGC 4 cut(s) 360, 597, 882, 1125
GluI GCNGC 3 cut(s) 1251, 1806, 2118
GsaI CCCAGC 1 cut(s) 335
GsuI CTGGAG 1 cut(s) 645
HaeII RGCGCY 1 cut(s) 362
HaeIII GGCC 6 cut(s) 411, 1074, 1103, 1601, 1903, 1979
HapII CCGG 7 cut(s) 22, 216, 264, 362, 1602, 1886, 1973
HhaI GCGC 4 cut(s) 361, 598, 883, 1126
Hin1I GRCGYC 1 cut(s) 1665
Hin1II CATG 9 cut(s) 557, 1040, 1189, 1319, 1351, 1430, 1574, 1612, 1621
Hin6I GCGC 4 cut(s) 359, 596, 881, 1124
HinP1I GCGC 4 cut(s) 359, 596, 881, 1124
HincII GTYRAC 5 cut(s) 421, 797, 1274, 1398, 1567
HindII GTYRAC 5 cut(s) 421, 797, 1274, 1398, 1567
HindIII AAGCTT 2 cut(s) 1136, 1390
HpaI GTTAAC 1 cut(s) 1398
HpaII CCGG 7 cut(s) 22, 216, 264, 362, 1602, 1886, 1973
HphI GGTGA 3 cut(s) 169, 583, 2030
Hpy166II GTNNAC 9 cut(s) 421, 511, 797, 1165, 1274, 1339, 1398, 1567, 1669
Hpy188I TCNGA 4 cut(s) 251, 313, 719, 1287
Hpy188III TCNNGA 7 cut(s) 158, 191, 891, 1037, 1049, 1886, 2002
Hpy8I GTNNAC 9 cut(s) 421, 511, 797, 1165, 1274, 1339, 1398, 1567, 1669
Hpy99I CGWCG 1 cut(s) 317
HpyAV CCTTC 5 cut(s) 85, 106, 250, 1234, 1781
HpyCH4III ACNGT 5 cut(s) 69, 1358, 1594, 1673, 2079
HpyCH4IV ACGT 6 cut(s) 123, 284, 296, 507, 588, 1665
HpyF10VI GCNNNNNNNGC 3 cut(s) 171, 408, 1199
HpyF3I CTNAG 6 cut(s) 248, 514, 674, 733, 1277, 2124
HpySE526I ACGT 6 cut(s) 123, 284, 296, 507, 588, 1665
Hsp92I GRCGYC 1 cut(s) 1665
Hsp92II CATG 9 cut(s) 557, 1040, 1189, 1319, 1351, 1430, 1574, 1612, 1621
HspAI GCGC 4 cut(s) 359, 596, 881, 1124
Kpn2I TCCGGA 1 cut(s) 1885
KroI GCCGGC 1 cut(s) 361
KroNI GCCGGC 1 cut(s) 363
KspAI GTTAAC 1 cut(s) 1398
Kzo9I GATC 5 cut(s) 524, 739, 816, 1045, 1888
LmnI GCTCC 4 cut(s) 24, 750, 828, 1774
Lsp1109I GCAGC 2 cut(s) 1262, 1817
LweI GCATC 4 cut(s) 570, 1291, 1445, 1507
MabI ACCWGGT 1 cut(s) 1724
MaeI CTAG 7 cut(s) 356, 911, 1026, 1077, 1650, 1899, 2028
MaeII ACGT 6 cut(s) 123, 284, 296, 507, 588, 1665
MaeIII GTNAC 3 cut(s) 589, 650, 2018
MalI GATC 5 cut(s) 526, 741, 818, 1047, 1890
MboI GATC 5 cut(s) 524, 739, 816, 1045, 1888
MfeI CAATTG 1 cut(s) 44
MflI RGATCY 1 cut(s) 1045
MhlI GDGCHC 3 cut(s) 190, 1779, 1882
MluI ACGCGT 1 cut(s) 1191
MlyI GAGTC 3 cut(s) 506, 1269, 2051
MmeI TCCRAC 3 cut(s) 336, 886, 1494
MroI TCCGGA 1 cut(s) 1885
MroNI GCCGGC 1 cut(s) 361
MseI TTAA 6 cut(s) 12, 1206, 1397, 1527, 1856, 1932
MslI CAYNNNNRTG 2 cut(s) 159, 554
MspA1I CMGCKG 1 cut(s) 335
MspI CCGG 7 cut(s) 22, 216, 264, 362, 1602, 1886, 1973
MspR9I CCNGG 2 cut(s) 710, 1726
MunI CAATTG 1 cut(s) 44
Mva1269I GAATGC 2 cut(s) 347, 683
MvaI CCWGG 2 cut(s) 710, 1726
MvnI CGCG 3 cut(s) 596, 1193, 1532
MwoI GCNNNNNNNGC 3 cut(s) 171, 408, 1199
NaeI GCCGGC 1 cut(s) 363
NcoI CCATGG 2 cut(s) 1570, 1608
NdeII GATC 5 cut(s) 524, 739, 816, 1045, 1888
NgoMIV GCCGGC 1 cut(s) 361
NheI GCTAGC 1 cut(s) 1649
NlaIII CATG 9 cut(s) 557, 1040, 1189, 1319, 1351, 1430, 1574, 1612, 1621
NlaIV GGNNCC 5 cut(s) 20, 370, 1047, 1313, 1606
NmeAIII GCCGAG 1 cut(s) 761
NmuCI GTSAC 2 cut(s) 589, 2018
NsbI TGCGCA 1 cut(s) 1125
NspV TTCGAA 3 cut(s) 1059, 1938, 2105
OliI CACNNNNGTG 1 cut(s) 554
PagI TCATGA 1 cut(s) 1036
PctI GAATGC 2 cut(s) 347, 683
PdiI GCCGGC 1 cut(s) 363
PfeI GAWTC 7 cut(s) 670, 694, 836, 1288, 1367, 1413, 2107
PflMI CCANNNNNTGG 1 cut(s) 338
PinAI ACCGGT 1 cut(s) 215
PkrI GCNGC 3 cut(s) 1252, 1807, 2119
PleI GAGTC 3 cut(s) 506, 1269, 2050
PpsI GAGTC 3 cut(s) 506, 1269, 2050
PpuMI RGGWCCY 1 cut(s) 369
Psp124BI GAGCTC 1 cut(s) 1779
Psp5II RGGWCCY 1 cut(s) 369
Psp6I CCWGG 2 cut(s) 708, 1724
PspFI CCCAGC 1 cut(s) 331
PspGI CCWGG 2 cut(s) 708, 1724
PspN4I GGNNCC 5 cut(s) 20, 370, 1047, 1313, 1606
PspPI GGNCC 4 cut(s) 369, 706, 1073, 1102
PspPPI RGGWCCY 1 cut(s) 369
PsrI GAACNNNNNNTAC 2 cut(s) 191, 223
PstI CTGCAG 1 cut(s) 983
PsuI RGATCY 1 cut(s) 1045
PvuII CAGCTG 1 cut(s) 335
RsaI GTAC 4 cut(s) 461, 1012, 1032, 1379
RsaNI GTAC 4 cut(s) 460, 1011, 1031, 1378
RseI CAYNNNNRTG 2 cut(s) 159, 554
SacI GAGCTC 1 cut(s) 1779
SalI GTCGAC 2 cut(s) 1272, 1565
SaqAI TTAA 6 cut(s) 12, 1206, 1397, 1527, 1856, 1932
SatI GCNGC 3 cut(s) 1251, 1806, 2118
Sau3AI GATC 5 cut(s) 524, 739, 816, 1045, 1888
Sau96I GGNCC 4 cut(s) 369, 706, 1073, 1102
ScaI AGTACT 1 cut(s) 1012
SchI GAGTC 3 cut(s) 506, 1269, 2051
ScrFI CCNGG 2 cut(s) 710, 1726
SduI GDGCHC 3 cut(s) 190, 1779, 1882
SexAI ACCWGGT 1 cut(s) 1724
SfaNI GCATC 4 cut(s) 570, 1291, 1445, 1507
SfcI CTRYAG 2 cut(s) 979, 1669
SfuI TTCGAA 3 cut(s) 1059, 1938, 2105
SinI GGWCC 2 cut(s) 369, 706
SmiMI CAYNNNNRTG 2 cut(s) 159, 554
SmlI CTYRAG 1 cut(s) 578
SmoI CTYRAG 1 cut(s) 578
SpeI ACTAGT 2 cut(s) 910, 2027
SsiI CCGC 4 cut(s) 172, 594, 1704, 1824
SspI AATATT 2 cut(s) 616, 724
SspMI CTAG 7 cut(s) 356, 911, 1026, 1077, 1650, 1899, 2028
SstI GAGCTC 1 cut(s) 1779
StyD4I CCNGG 2 cut(s) 708, 1724
StyI CCWWGG 4 cut(s) 1076, 1459, 1570, 1608
TaaI ACNGT 5 cut(s) 69, 1358, 1594, 1673, 2079
TaiI ACGT 6 cut(s) 126, 287, 299, 510, 591, 1668
TatI WGTACW 3 cut(s) 459, 1010, 1377
TfiI GAWTC 7 cut(s) 670, 694, 836, 1288, 1367, 1413, 2107
Tru1I TTAA 6 cut(s) 12, 1206, 1397, 1527, 1856, 1932
Tru9I TTAA 6 cut(s) 12, 1206, 1397, 1527, 1856, 1932
TscAI CASTG 3 cut(s) 381, 628, 1953
TseFI GTSAC 2 cut(s) 589, 2018
TseI GCWGC 3 cut(s) 1250, 1805, 2117
Tsp45I GTSAC 2 cut(s) 589, 2018
TspGWI ACGGA 2 cut(s) 330, 1640
TspRI CASTG 3 cut(s) 381, 628, 1953
Van91I CCANNNNNTGG 1 cut(s) 338
VpaK11BI GGWCC 2 cut(s) 369, 706
XapI RAATTY 6 cut(s) 488, 1055, 1082, 1343, 1522, 2101
XcmI CCANNNNNNNNNTGG 3 cut(s) 136, 1360, 1615
XmaJI CCTAGG 1 cut(s) 1076
XmiI GTMKAC 5 cut(s) 510, 1273, 1338, 1566, 1668
XspI CTAG 7 cut(s) 356, 911, 1026, 1077, 1650, 1899, 2028
ZraI GACGTC 1 cut(s) 1666
ZrmI AGTACT 1 cut(s) 1012
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.