Rroxscaffold_4G00298960

L-type lectin-domain containing receptor kinase IX.1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000038
Physical Location & Seq
Forward (+)
18882707 .. 18890277
7571 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00298960.1

Sequence Viewer

Length: 2058 bp
ATGCATCGTCGAAGGTCATCGGAGTCGTTGGAAAAAGCGTCGAAACTGCCGAAAACACAGAAACTTTCGAGCCTCGAATCTCTCTCCTCGCTCCACGCATGGACTAACCGTGACCAAAGGCACGTCGACCGAATACACAGAGAGATTGAAAGGGGGAGAGAGATACAGAGATACAAAGAGATCGGTGTAAATCAGTTCGACACTAGTACATATGGAGTTGTCTATGAAGGTGAGGCTCGGCCTTTATCGGGAAATATTGAACTGAACAGAGGCAATTTATTCGGTGTTGGACGTGCTACTTATGCAGAGCCTTTGCACCTATGGGACAATGCTACTGGGTCACTGGCAGACTTCACTACTCATTTCACTTTCATGGCCGACTCTGATGACTTGGACTTCGGCGATGGATTTGCCTTTTACCTTGCTCCTGTTGGCTACGGTATTCCACCCAACTCTGGCAGTAGTGAACTGGGATTATTCAACACCACCACCAATTTTAATGCGTTGTCCACAAACAAGATTGTAACCGTAGAGTTCGACACCTGGGGAAATTCAGGAGATGGATGGGATCCAGTCGGGGCCCATATAGGGATAAACATCAATGAACTCTCTTCGGTTATGTACGCCAATTGGAATACCAGTAACATCACCGGGAAGATTGGTAATGCATGGATTACTTACAACGCTACTGCCAACAACCTTACTGTGTTTTGGACATTCAAGGAAAACGCAAACCCTGTTTTTCCAGGCAATACTACTTCTTCCCTTACTTACCATGTTGACTTGCGAAAGATTCTCCCAGAAAACGTTACAATTGGTTTTTCTGCTTCCTGCGGATCCGGATCTTATACTGCGCGGTATTTTTTAAATTCATGGGCGTTTAATTCGACTTTGTTGGATAACAATATCAGAAGAGCCGAAAGCAAGGGAAAGAAGAAAAAGATATTCTTGATACTGGTCATTGCAGTACCTGGCTTCATTTTCACGCTTGGTGCAGTCATATGTTGGTTGATGGTATTATGGAATCGGAGAAACAATTACTCTGGCCCAGCCTCTGATCTTGAGAAGCTAGCCTTTCCAAAACGATTTGCTTACCAAGAATTGTTTGCTGCCACCAACGGGTTTGCAGACGAGAGAAGGCTAGGCCAAGGAGGGTCGGGACAAGTATATAAAGGACTCCTACAAGACCTTGGAGGCTGCACAGTTGCTGTGAAGAGAATCTTTGCAAGATCTGATCAGCAAGATGAGAAAGTCTTCATCAATGAAGTCAAAATCATCAGCCGCTTAATCCATCGAAACCTGGTGCAGTTCATTGGGTGGTGTCATGAGCAAGGGGAATGCTTACTTGTTTATGCATATATGCCAAACACCAGCCTCGACACACATTTATTTGGCACCAGAACAACCCTGCAATGGGATAACAGGTACAAGATAGCTATGGGATTGGCCTCAGCCCTTCACTATCTACATGAAGATGCAGAGCAGTGTGTTCTTCATAGGGATATCAAATCAGCTAACGTATTGTTGGGTGATGACTTCAGCACTAAGCTTGGTGATTTTGGTATTGCTAAGCTCGTGGATTCCCGCTTCTGGTCTCAGACAAGAGAGGTGGCAGGGACTTTTGGATACATGGCCCCTGAATATGCTATGGAAGGAAGGGCTAGTAAGGAATCTGACATTTTTAGTTTTGGAGTTGTAGCCTTGGAAATTGCTTGCGGAAGGAAGACTTACGAAGACGGTGAATATCACATGCCACTCTTTAGGTGGGTTTGGCAGTTGTTCCTTGGAGGAAATATTCTGGACGCAGCTGATGAAAGATTAGAAATGAATTATGATCGAAATGAAATGAAATGCTTGTTGATTGTTGGACTATGGTGTACTCACCCCAACAACAAGGAAAGACCAAAAGCAGGACAGGTGATGAAGGTTATTCAGCATGAAGCACCATTGCCGGAACTTCCACATGAGATGCATAATGTTCCAGAACTGCCTCAACCTCAATACCAATCTCAAATTGCATCTTCTCAGATATCCTCAACTTCTTCTAGCTATATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase

Protein Analysis

685

Amino Acids

77.03

Weight (kDa)

6.28

Isoelectric Point (pI)

45.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 64 - 303 7.5e-57 Legume lectin domain
Pkinase PF00069 376 - 642 1.4e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 378 - 579 5e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1394
AccI GTMKAC 1 cut(s) 126
AccII CGCG 1 cut(s) 856
AccIII TCCGGA 1 cut(s) 839
AciI CCGC 5 cut(s) 834, 856, 1282, 1585, 1716
AclI AACGTT 1 cut(s) 807
AclWI GGATC 5 cut(s) 563, 576, 831, 844, 850
AcoI YGGCCR 1 cut(s) 375
AcsI RAATTY 2 cut(s) 550, 868
AcuI CTGAAG 1 cut(s) 1522
AfaI GTAC 5 cut(s) 208, 623, 969, 1427, 1879
AfiI CCNNNNNNNGG 8 cut(s) 248, 455, 588, 1119, 1413, 1414, 1590, 1910
AgsI TTSAA 4 cut(s) 149, 260, 481, 721
AhlI ACTAGT 1 cut(s) 203
AjiI CACGTC 2 cut(s) 124, 293
AjnI CCWGG 4 cut(s) 542, 745, 970, 1299
AluBI AGCT 7 cut(s) 1069, 1436, 1514, 1549, 1573, 1808, 2049
AluI AGCT 7 cut(s) 1069, 1436, 1514, 1549, 1573, 1808, 2049
Alw26I GTCTC 1 cut(s) 1599
AlwI GGATC 5 cut(s) 563, 576, 831, 844, 850
AlwNI CAGNNNCTG 3 cut(s) 971, 1055, 1208
Aor13HI TCCGGA 1 cut(s) 839
AoxI GGCC 7 cut(s) 239, 375, 579, 1045, 1144, 1446, 1632
ApaI GGGCCC 1 cut(s) 583
ApeKI GCWGC 3 cut(s) 1109, 1197, 1805
ApoI RAATTY 2 cut(s) 550, 868
ArsI GACNNNNNNTTYG 2 cut(s) 380, 412
Asp700I GAANNNNTTC 1 cut(s) 1253
AspLEI GCGC 1 cut(s) 856
AspS9I GGNCC 4 cut(s) 579, 580, 1046, 1633
AsuC2I CCSGG 1 cut(s) 652
AsuHPI GGTGA 7 cut(s) 242, 640, 1541, 1565, 1751, 1874, 1930
AsuNHI GCTAGC 1 cut(s) 1069
BaeGI GKGCMC 1 cut(s) 583
BamHI GGATCC 2 cut(s) 568, 836
BanI GGYRCC 1 cut(s) 1394
BanII GRGCYC 1 cut(s) 583
BauI CACGAG 1 cut(s) 1574
BbsI GAAGAC 3 cut(s) 1246, 1730, 1740
BbvCI CCTCAGC 1 cut(s) 1450
BbvI GCAGC 3 cut(s) 1096, 1184, 1817
BccI CCATC 5 cut(s) 398, 554, 558, 1006, 1299
BcgI CGANNNNNNTGC 4 cut(s) 262, 296, 392, 426
BciT130I CCWGG 4 cut(s) 544, 747, 972, 1301
BciVI GTATCC 1 cut(s) 1619
BclI TGATCA 1 cut(s) 1234
BcnI CCSGG 1 cut(s) 652
BcoDI GTCTC 1 cut(s) 1599
BcuI ACTAGT 1 cut(s) 203
BfaI CTAG 5 cut(s) 204, 1070, 1142, 1662, 2046
BfuI GTATCC 1 cut(s) 1619
BglII AGATCT 1 cut(s) 1229
BisI GCNGC 4 cut(s) 1110, 1198, 1282, 1806
BlpI GCTNAGC 1 cut(s) 1569
BlsI GCNGC 4 cut(s) 1111, 1199, 1283, 1807
Bme1390I CCNGG 5 cut(s) 544, 652, 747, 972, 1301
BmgBI CACGTC 2 cut(s) 124, 293
BmgT120I GGNCC 4 cut(s) 579, 580, 1046, 1633
BmiI GGNNCC 6 cut(s) 570, 580, 581, 838, 1396, 1635
BmrFI CCNGG 5 cut(s) 544, 652, 747, 972, 1301
BmrI ACTGGG 2 cut(s) 345, 479
BmsI GCATC 4 cut(s) 13, 1465, 1959, 2027
BmtI GCTAGC 1 cut(s) 1073
BmuI ACTGGG 2 cut(s) 345, 479
BpiI GAAGAC 3 cut(s) 1246, 1730, 1740
Bpu10I CCTNAGC 1 cut(s) 1450
Bpu1102I GCTNAGC 1 cut(s) 1569
BpuEI CTTGAG 1 cut(s) 1082
BpuMI CCSGG 1 cut(s) 652
BsaBI GATNNNNATC 2 cut(s) 596, 841
BsaI GGTCTC 1 cut(s) 1599
BsaJI CCNNGG 5 cut(s) 543, 1147, 1189, 1701, 1783
BsaWI WCCGGW 1 cut(s) 839
Bsc4I CCNNNNNNNGG 8 cut(s) 248, 455, 588, 1119, 1413, 1414, 1590, 1910
Bse1I ACTGG 6 cut(s) 340, 348, 474, 572, 639, 960
Bse3DI GCAATG 3 cut(s) 960, 1418, 1946
Bse8I GATNNNNATC 2 cut(s) 596, 841
BseAI TCCGGA 1 cut(s) 839
BseBI CCWGG 4 cut(s) 544, 747, 972, 1301
BseDI CCNNGG 5 cut(s) 543, 1147, 1189, 1701, 1783
BseGI GGATG 1 cut(s) 569
BseJI GATNNNNATC 2 cut(s) 596, 841
BseLI CCNNNNNNNGG 8 cut(s) 248, 455, 588, 1119, 1413, 1414, 1590, 1910
BseMI GCAATG 3 cut(s) 960, 1418, 1946
BseMII CTCAG 3 cut(s) 1464, 1610, 2039
BseNI ACTGG 6 cut(s) 340, 348, 474, 572, 639, 960
BseRI GAGGAG 1 cut(s) 76
BseSI GKGCMC 1 cut(s) 583
BseXI GCAGC 3 cut(s) 1096, 1184, 1817
BseYI CCCAGC 1 cut(s) 1048
BsgI GTGCAG 3 cut(s) 1014, 1183, 1325
Bsh1236I CGCG 1 cut(s) 856
Bsh1285I CGRYCG 1 cut(s) 130
BshFI GGCC 7 cut(s) 241, 377, 581, 1047, 1146, 1448, 1634
BshNI GGYRCC 1 cut(s) 1394
BsiEI CGRYCG 1 cut(s) 130
BsiSI CCGG 3 cut(s) 651, 840, 1952
BslFI GGGAC 3 cut(s) 338, 1173, 1630
BslI CCNNNNNNNGG 8 cut(s) 248, 455, 588, 1119, 1413, 1414, 1590, 1910
BsmAI GTCTC 1 cut(s) 1599
BsmFI GGGAC 3 cut(s) 338, 1173, 1630
BsmI GAATGC 1 cut(s) 1343
BsnI GGCC 7 cut(s) 241, 377, 581, 1047, 1146, 1448, 1634
Bso31I GGTCTC 1 cut(s) 1599
Bsp120I GGGCCC 1 cut(s) 579
Bsp1286I GDGCHC 1 cut(s) 583
Bsp13I TCCGGA 1 cut(s) 839
Bsp143I GATC 8 cut(s) 180, 568, 836, 842, 1057, 1229, 1234, 1834
Bsp1720I GCTNAGC 1 cut(s) 1569
BspACI CCGC 5 cut(s) 834, 856, 1282, 1585, 1716
BspANI GGCC 7 cut(s) 241, 377, 581, 1047, 1146, 1448, 1634
BspCNI CTCAG 3 cut(s) 1463, 1609, 2038
BspEI TCCGGA 1 cut(s) 839
BspFNI CGCG 1 cut(s) 856
BspHI TCATGA 1 cut(s) 1324
BspLI GGNNCC 6 cut(s) 570, 580, 581, 838, 1396, 1635
BspOI GCTAGC 1 cut(s) 1073
BspPI GGATC 5 cut(s) 563, 576, 831, 844, 850
BspQI GCTCTTC 1 cut(s) 907
BspT107I GGYRCC 1 cut(s) 1394
BspTNI GGTCTC 1 cut(s) 1599
BsrDI GCAATG 3 cut(s) 960, 1418, 1946
BsrI ACTGG 6 cut(s) 340, 348, 474, 572, 639, 960
BssECI CCNNGG 5 cut(s) 543, 1147, 1189, 1701, 1783
BssMI GATC 8 cut(s) 180, 568, 836, 842, 1057, 1229, 1234, 1834
BssSI CACGAG 1 cut(s) 1574
BssT1I CCWWGG 4 cut(s) 1147, 1189, 1701, 1783
Bst2BI CACGAG 1 cut(s) 1574
Bst2UI CCWGG 4 cut(s) 544, 747, 972, 1301
Bst4CI ACNGT 6 cut(s) 110, 440, 529, 706, 1204, 1739
Bst6I CTCTTC 3 cut(s) 616, 907, 1208
BstC8I GCNNGC 2 cut(s) 1071, 1714
BstDEI CTNAG 5 cut(s) 1450, 1545, 1569, 1596, 2025
BstF5I GGATG 1 cut(s) 569
BstFNI CGCG 1 cut(s) 856
BstHHI GCGC 1 cut(s) 856
BstKTI GATC 8 cut(s) 183, 571, 839, 845, 1060, 1232, 1237, 1837
BstMAI GTCTC 1 cut(s) 1599
BstMBI GATC 8 cut(s) 180, 568, 836, 842, 1057, 1229, 1234, 1834
BstMCI CGRYCG 1 cut(s) 130
BstMWI GCNNNNNNNGC 1 cut(s) 302
BstNI CCWGG 4 cut(s) 544, 747, 972, 1301
BstNSI RCATGY 1 cut(s) 1753
BstSCI CCNGG 5 cut(s) 542, 650, 745, 970, 1299
BstSLI GKGCMC 1 cut(s) 583
BstUI CGCG 1 cut(s) 856
BstV1I GCAGC 3 cut(s) 1096, 1184, 1817
BstV2I GAAGAC 3 cut(s) 1246, 1730, 1740
BstX2I RGATCY 4 cut(s) 568, 836, 842, 1229
BstYI RGATCY 4 cut(s) 568, 836, 842, 1229
BsuI GTATCC 1 cut(s) 1619
BsuRI GGCC 7 cut(s) 241, 377, 581, 1047, 1146, 1448, 1634
BtgZI GCGATG 1 cut(s) 417
BtrI CACGTC 2 cut(s) 124, 293
BtsCI GGATG 1 cut(s) 569
BtsI GCAGTG 1 cut(s) 1490
BtsIMutI CAGTG 2 cut(s) 341, 1490
Cac8I GCNNGC 2 cut(s) 1071, 1714
CaiI CAGNNNCTG 3 cut(s) 971, 1055, 1208
CciI TCATGA 1 cut(s) 1324
CfoI GCGC 1 cut(s) 856
Cfr13I GGNCC 4 cut(s) 579, 580, 1046, 1633
CseI GACGC 2 cut(s) 27, 1811
CsiI ACCWGGT 1 cut(s) 1299
Csp6I GTAC 5 cut(s) 207, 622, 968, 1426, 1878
CspCI CAANNNNNGTGG 2 cut(s) 1590, 1625
CviQI GTAC 5 cut(s) 207, 622, 968, 1426, 1878
DdeI CTNAG 5 cut(s) 1450, 1545, 1569, 1596, 2025
DpnI GATC 8 cut(s) 182, 570, 838, 844, 1059, 1231, 1236, 1836
DpnII GATC 8 cut(s) 180, 568, 836, 842, 1057, 1229, 1234, 1834
DraI TTTAAA 1 cut(s) 867
EaeI YGGCCR 1 cut(s) 375
Eam1104I CTCTTC 3 cut(s) 616, 907, 1208
EarI CTCTTC 3 cut(s) 616, 907, 1208
Eco130I CCWWGG 4 cut(s) 1147, 1189, 1701, 1783
Eco24I GRGCYC 1 cut(s) 583
Eco31I GGTCTC 1 cut(s) 1599
Eco32I GATATC 2 cut(s) 1504, 2031
Eco57I CTGAAG 1 cut(s) 1522
EcoO109I RGGNCCY 1 cut(s) 579
EcoRII CCWGG 4 cut(s) 542, 745, 970, 1299
EcoRV GATATC 2 cut(s) 1504, 2031
EcoT14I CCWWGG 4 cut(s) 1147, 1189, 1701, 1783
EcoT22I ATGCAT 4 cut(s) 6, 670, 1357, 1974
EcoT38I GRGCYC 1 cut(s) 583
ErhI CCWWGG 4 cut(s) 1147, 1189, 1701, 1783
FalI AAGNNNNNCTT 8 cut(s) 932, 964, 1058, 1090, 1205, 1237, 1711, 1743
FaqI GGGAC 3 cut(s) 338, 1173, 1630
FauI CCCGC 1 cut(s) 1592
FauNDI CATATG 2 cut(s) 211, 1001
FbaI TGATCA 1 cut(s) 1234
FblI GTMKAC 1 cut(s) 126
Fnu4HI GCNGC 4 cut(s) 1110, 1198, 1282, 1806
FokI GGATG 1 cut(s) 576
FriOI GRGCYC 1 cut(s) 583
Fsp4HI GCNGC 4 cut(s) 1110, 1198, 1282, 1806
FspBI CTAG 5 cut(s) 204, 1070, 1142, 1662, 2046
GlaI GCGC 1 cut(s) 855
GluI GCNGC 4 cut(s) 1110, 1198, 1282, 1806
GsaI CCCAGC 1 cut(s) 1052
HaeIII GGCC 7 cut(s) 241, 377, 581, 1047, 1146, 1448, 1634
HapII CCGG 3 cut(s) 651, 840, 1952
HgaI GACGC 2 cut(s) 27, 1811
HhaI GCGC 1 cut(s) 856
Hin6I GCGC 1 cut(s) 854
HinP1I GCGC 1 cut(s) 854
HincII GTYRAC 2 cut(s) 127, 781
HindII GTYRAC 2 cut(s) 127, 781
HindIII AAGCTT 1 cut(s) 1547
HinfI GANTC 9 cut(s) 23, 77, 380, 793, 1024, 1176, 1218, 1580, 1670
HpaII CCGG 3 cut(s) 651, 840, 1952
HphI GGTGA 7 cut(s) 242, 640, 1541, 1565, 1751, 1874, 1930
Hpy166II GTNNAC 5 cut(s) 127, 467, 510, 781, 1878
Hpy188I TCNGA 9 cut(s) 22, 385, 911, 1029, 1057, 1234, 1599, 1675, 2028
Hpy188III TCNNGA 9 cut(s) 249, 555, 840, 949, 1061, 1158, 1325, 1799, 1982
Hpy8I GTNNAC 5 cut(s) 127, 467, 510, 781, 1878
Hpy99I CGWCG 3 cut(s) 12, 43, 128
HpyAV CCTTC 8 cut(s) 6, 221, 1131, 1466, 1646, 1650, 1713, 1918
HpyCH4III ACNGT 6 cut(s) 110, 440, 529, 706, 1204, 1739
HpyCH4IV ACGT 4 cut(s) 123, 292, 807, 1518
HpyF10VI GCNNNNNNNGC 1 cut(s) 302
HpyF3I CTNAG 5 cut(s) 1450, 1545, 1569, 1596, 2025
HpySE526I ACGT 4 cut(s) 123, 292, 807, 1518
HspAI GCGC 1 cut(s) 854
Kpn2I TCCGGA 1 cut(s) 839
Ksp22I TGATCA 1 cut(s) 1234
Kzo9I GATC 8 cut(s) 180, 568, 836, 842, 1057, 1229, 1234, 1834
LguI GCTCTTC 1 cut(s) 907
LmnI GCTCC 2 cut(s) 96, 430
Lsp1109I GCAGC 3 cut(s) 1096, 1184, 1817
LweI GCATC 4 cut(s) 13, 1465, 1959, 2027
MabI ACCWGGT 1 cut(s) 1299
MaeI CTAG 5 cut(s) 204, 1070, 1142, 1662, 2046
MaeII ACGT 4 cut(s) 123, 292, 807, 1518
MaeIII GTNAC 5 cut(s) 110, 339, 523, 641, 808
MalI GATC 8 cut(s) 182, 570, 838, 844, 1059, 1231, 1236, 1836
MboI GATC 8 cut(s) 180, 568, 836, 842, 1057, 1229, 1234, 1834
MfeI CAATTG 2 cut(s) 628, 813
MflI RGATCY 4 cut(s) 568, 836, 842, 1229
MhlI GDGCHC 1 cut(s) 583
MlyI GAGTC 3 cut(s) 32, 374, 1170
MmeI TCCRAC 4 cut(s) 9, 268, 876, 1846
Mph1103I ATGCAT 4 cut(s) 6, 670, 1357, 1974
MroI TCCGGA 1 cut(s) 839
MroXI GAANNNNTTC 1 cut(s) 1253
MseI TTAA 4 cut(s) 498, 866, 882, 1286
MslI CAYNNNNRTG 2 cut(s) 371, 1473
MspA1I CMGCKG 1 cut(s) 1808
MspI CCGG 3 cut(s) 651, 840, 1952
MspR9I CCNGG 5 cut(s) 544, 652, 747, 972, 1301
MunI CAATTG 2 cut(s) 628, 813
Mva1269I GAATGC 1 cut(s) 1343
MvaI CCWGG 4 cut(s) 544, 747, 972, 1301
MvnI CGCG 1 cut(s) 856
MwoI GCNNNNNNNGC 1 cut(s) 302
NciI CCSGG 1 cut(s) 652
NdeI CATATG 2 cut(s) 211, 1001
NdeII GATC 8 cut(s) 180, 568, 836, 842, 1057, 1229, 1234, 1834
NheI GCTAGC 1 cut(s) 1069
NlaIV GGNNCC 6 cut(s) 570, 580, 581, 838, 1396, 1635
NmeAIII GCCGAG 1 cut(s) 217
NmuCI GTSAC 2 cut(s) 110, 339
NsiI ATGCAT 4 cut(s) 6, 670, 1357, 1974
NspI RCATGY 1 cut(s) 1753
PagI TCATGA 1 cut(s) 1324
PciSI GCTCTTC 1 cut(s) 907
PcsI WCGNNNNNNNCGW 1 cut(s) 47
PctI GAATGC 1 cut(s) 1343
PdmI GAANNNNTTC 1 cut(s) 1253
PfeI GAWTC 6 cut(s) 77, 793, 1024, 1218, 1580, 1670
PkrI GCNGC 4 cut(s) 1111, 1199, 1283, 1807
PleI GAGTC 3 cut(s) 31, 374, 1170
PpsI GAGTC 3 cut(s) 31, 374, 1170
Psp1406I AACGTT 1 cut(s) 807
Psp6I CCWGG 4 cut(s) 542, 745, 970, 1299
PspFI CCCAGC 1 cut(s) 1048
PspGI CCWGG 4 cut(s) 542, 745, 970, 1299
PspN4I GGNNCC 6 cut(s) 570, 580, 581, 838, 1396, 1635
PspOMI GGGCCC 1 cut(s) 579
PspPI GGNCC 4 cut(s) 579, 580, 1046, 1633
PstNI CAGNNNCTG 3 cut(s) 971, 1055, 1208
PsuI RGATCY 4 cut(s) 568, 836, 842, 1229
PvuII CAGCTG 1 cut(s) 1808
RsaI GTAC 5 cut(s) 208, 623, 969, 1427, 1879
RsaNI GTAC 5 cut(s) 207, 622, 968, 1426, 1878
RseI CAYNNNNRTG 2 cut(s) 371, 1473
SalI GTCGAC 1 cut(s) 125
SapI GCTCTTC 1 cut(s) 907
SaqAI TTAA 4 cut(s) 498, 866, 882, 1286
SatI GCNGC 4 cut(s) 1110, 1198, 1282, 1806
Sau3AI GATC 8 cut(s) 180, 568, 836, 842, 1057, 1229, 1234, 1834
Sau96I GGNCC 4 cut(s) 579, 580, 1046, 1633
SchI GAGTC 3 cut(s) 32, 374, 1170
ScrFI CCNGG 5 cut(s) 544, 652, 747, 972, 1301
SduI GDGCHC 1 cut(s) 583
SexAI ACCWGGT 1 cut(s) 1299
SfaNI GCATC 4 cut(s) 13, 1465, 1959, 2027
SmiMI CAYNNNNRTG 2 cut(s) 371, 1473
SmlI CTYRAG 1 cut(s) 1061
SmoI CTYRAG 1 cut(s) 1061
SpeI ACTAGT 1 cut(s) 203
SsiI CCGC 5 cut(s) 834, 856, 1282, 1585, 1716
SspI AATATT 2 cut(s) 256, 1795
SspMI CTAG 5 cut(s) 204, 1070, 1142, 1662, 2046
StyD4I CCNGG 5 cut(s) 542, 650, 745, 970, 1299
StyI CCWWGG 4 cut(s) 1147, 1189, 1701, 1783
TaaI ACNGT 6 cut(s) 110, 440, 529, 706, 1204, 1739
TaiI ACGT 4 cut(s) 126, 295, 810, 1521
TaqII GACCGA 1 cut(s) 144
TatI WGTACW 2 cut(s) 206, 1877
TauI GCSGC 1 cut(s) 1284
TfiI GAWTC 6 cut(s) 77, 793, 1024, 1218, 1580, 1670
Tru1I TTAA 4 cut(s) 498, 866, 882, 1286
Tru9I TTAA 4 cut(s) 498, 866, 882, 1286
TscAI CASTG 2 cut(s) 348, 1490
TseFI GTSAC 2 cut(s) 110, 339
TseI GCWGC 3 cut(s) 1109, 1197, 1805
Tsp45I GTSAC 2 cut(s) 110, 339
TspRI CASTG 2 cut(s) 348, 1490
XapI RAATTY 2 cut(s) 550, 868
XceI RCATGY 1 cut(s) 1753
XcmI CCANNNNNNNNNTGG 1 cut(s) 1761
XmiI GTMKAC 1 cut(s) 126
XmnI GAANNNNTTC 1 cut(s) 1253
XspI CTAG 5 cut(s) 204, 1070, 1142, 1662, 2046
Zsp2I ATGCAT 4 cut(s) 6, 670, 1357, 1974
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.