RchiOBHm_Chr3g0481491

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Reverse (-)
27537295 .. 27538770
1476 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ44644

Sequence Viewer

Length: 1368 bp
ATGGTTGAGTTTGATACATTCCAAGATGATTGGGATCCCCCGGGACCCCATGTTGGGATCAATGTAAATAATATCTCATCAGCCATTACCGCCAGCTTGGATTTCAGCAGCACCAAGGTAGTTAAGACATCGATAACTTACAATGCTACCACAAAGATCCTCAGTGTTCTTTGGACTGACGAGGAAACCCTAAATCCTAGTACTACTCCTCTTTCTTACCAAATCGAATTCCCCAATATTTTGCCAGAATGGGTTACAGTTGGGTTTTCAGCTGCTACCGGAAGACACATTGAGAACCATATAATAAAATCATGGGAATTCAATTCCAAGTTGGATTCTGATGAGGTGAATAATATAGGAAAATGGAAGACATTCTTGATAGTGGCAGTCACTGCTATTCCTTTGTTTATTTTGGTACTTGGTGTGGCCTTGTGTTGGTTGTTGGTAAACAGGCAGATAAATAAGAATATTGAAGGACATGAATACCACTTCAATGCTGCAGTGCCTTCTCCAGCTACCATTGGTTTTGCAAATGATAGAAGGCTAGGCCAAGGAGGCTCGGGACAGGTATATAGAGGAGTCATACCAGATCTTGGCTGTGTGGTTGCTGTGAAGAGAATCTTTGCTGAATCTGAGCACCAGGAGAAAATTTTCACCAATGAAGTGAAAATCATAAGCCGCTTAATACATAAAAACCTGGTGCAGTTCATTGGATGGTGTCATGAGCAAGCCAAGCTTGATGCTCATCTCTTTGGCAGTAGAGCAACCTTGCAATGGGATTTCCGGTACAAGATAGCCTTAGGCTTAGCTTCGACCCTTCATTATCTACATGAAGATGCAGAGCAATATTGTGTCCTTCACAGGGATATTAAATCAGCTAACATATTGTTAGACAACGATTTTAGCACTAAGCTTGGGGATTTTGGGATTGCTAAGCTTGTAGATGCGCGGTTGAGGACTAGGGCAACAGGGGTGGCAGGGACTTTCGGCTACATGGCCCCGGAATATGCTTTTCAAGGGAGGGCTAGCAAAGAGTCGGACATGTTTAGTTTTGGAGTAGTAGCCTTGGAGATTGCTTGTGGAAGGCAGACTTATTACGATGGAGAATATCACATGCCACTTTTCGAGTGGGTTTGGCAGTTTTACCTTGCAGCAAATGTTCTCAAGGCAGCTGACGAGAGATTGGATATGAAATATGATCCAAGTGAAATGGAATGCTTGTTAATCGTGGGATTATGGGGCACTCACCTCAATAGTAAGGAGAGACCAAAAGCAGGACAAGTGATGAAGGTTCTGTTGCTTGAAGCGCCATTGCCACAACTTCCACGTGATAGGCATACGCATCATCACGGTCTATATGAACAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

455

Amino Acids

51.33

Weight (kDa)

5.98

Isoelectric Point (pI)

42.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 2 - 117 1e-30 Legume lectin domain
Pkinase PF00069 177 - 429 2.3e-35 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 179 - 367 2.1e-30 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 593
AccII CGCG 1 cut(s) 949
AciI CCGC 3 cut(s) 90, 679, 949
AclWI GGATC 5 cut(s) 29, 42, 65, 151, 1193
AcsI RAATTY 3 cut(s) 227, 317, 648
AcvI CACGTG 1 cut(s) 1328
AfaI GTAC 3 cut(s) 202, 417, 788
AfiI CCNNNNNNNGG 7 cut(s) 53, 54, 435, 593, 774, 862, 1274
AflIII ACRYGT 1 cut(s) 1041
AgsI TTSAA 5 cut(s) 322, 473, 493, 1016, 1304
AjnI CCWGG 2 cut(s) 639, 696
AluBI AGCT 9 cut(s) 96, 272, 515, 736, 809, 878, 913, 937, 1172
AluI AGCT 9 cut(s) 96, 272, 515, 736, 809, 878, 913, 937, 1172
Alw21I GWGCWC 1 cut(s) 639
Alw26I GTCTC 1 cut(s) 1258
AlwI GGATC 5 cut(s) 29, 42, 65, 151, 1193
AlwNI CAGNNNCTG 1 cut(s) 392
Ama87I CYCGRG 2 cut(s) 40, 559
AoxI GGCC 3 cut(s) 426, 547, 996
ApeKI GCWGC 5 cut(s) 108, 272, 497, 1151, 1169
ApoI RAATTY 3 cut(s) 227, 317, 648
Asp700I GAANNNNTTC 2 cut(s) 371, 650
AspLEI GCGC 2 cut(s) 949, 1309
AspS9I GGNCC 2 cut(s) 44, 997
AsuC2I CCSGG 3 cut(s) 41, 42, 1001
AsuHPI GGTGA 3 cut(s) 358, 646, 1238
AsuNHI GCTAGC 1 cut(s) 1025
AvaI CYCGRG 2 cut(s) 40, 559
AvaII GGWCC 1 cut(s) 44
AxyI CCTNAGG 1 cut(s) 799
BaeGI GKGCMC 1 cut(s) 1244
BamHI GGATCC 1 cut(s) 34
BbrPI CACGTG 1 cut(s) 1328
BbsI GAAGAC 2 cut(s) 289, 374
Bbv12I GWGCWC 1 cut(s) 639
BbvI GCAGC 5 cut(s) 120, 259, 484, 1163, 1181
BccI CCATC 2 cut(s) 708, 1094
BciT130I CCWGG 2 cut(s) 641, 698
BcnI CCSGG 3 cut(s) 41, 42, 1001
BcoDI GTCTC 1 cut(s) 1258
BfaI CTAG 4 cut(s) 198, 545, 960, 1026
BfmI CTRYAG 1 cut(s) 498
BfoI RGCGCY 1 cut(s) 1310
BglI GCCNNNNNGGC 1 cut(s) 555
BglII AGATCT 1 cut(s) 589
BisI GCNGC 6 cut(s) 109, 273, 498, 679, 1152, 1170
BlpI GCTNAGC 2 cut(s) 805, 933
BlsI GCNGC 6 cut(s) 110, 274, 499, 680, 1153, 1171
BmcAI AGTACT 1 cut(s) 202
Bme1390I CCNGG 5 cut(s) 41, 42, 641, 698, 1001
Bme18I GGWCC 1 cut(s) 44
BmeT110I CYCGRG 2 cut(s) 40, 559
BmgT120I GGNCC 2 cut(s) 44, 997
BmiI GGNNCC 4 cut(s) 36, 45, 46, 999
BmrFI CCNGG 5 cut(s) 41, 42, 641, 698, 1001
BmsI GCATC 4 cut(s) 730, 826, 934, 1351
BmtI GCTAGC 1 cut(s) 1029
BpiI GAAGAC 2 cut(s) 289, 374
BpmI CTGGAG 1 cut(s) 495
Bpu1102I GCTNAGC 2 cut(s) 805, 933
BpuEI CTTGAG 1 cut(s) 1148
BpuMI CCSGG 3 cut(s) 41, 42, 1001
Bsa29I ATCGAT 1 cut(s) 131
BsaAI YACGTR 1 cut(s) 1328
BsaBI GATNNNNATC 2 cut(s) 33, 744
BsaI GGTCTC 1 cut(s) 1258
BsaJI CCNNGG 6 cut(s) 39, 40, 114, 550, 999, 1065
BsaWI WCCGGW 2 cut(s) 278, 783
Bsc4I CCNNNNNNNGG 7 cut(s) 53, 54, 435, 593, 774, 862, 1274
Bse21I CCTNAGG 1 cut(s) 799
Bse3DI GCAATG 2 cut(s) 779, 1310
Bse8I GATNNNNATC 2 cut(s) 33, 744
BseBI CCWGG 2 cut(s) 641, 698
BseCI ATCGAT 1 cut(s) 131
BseDI CCNNGG 6 cut(s) 39, 40, 114, 550, 999, 1065
BseGI GGATG 1 cut(s) 719
BseJI GATNNNNATC 2 cut(s) 33, 744
BseLI CCNNNNNNNGG 7 cut(s) 53, 54, 435, 593, 774, 862, 1274
BseMI GCAATG 2 cut(s) 779, 1310
BseMII CTCAG 2 cut(s) 175, 624
BseRI GAGGAG 2 cut(s) 198, 591
BseSI GKGCMC 1 cut(s) 1244
BseXI GCAGC 5 cut(s) 120, 259, 484, 1163, 1181
BsgI GTGCAG 1 cut(s) 722
Bsh1236I CGCG 1 cut(s) 949
BshFI GGCC 3 cut(s) 428, 549, 998
BshVI ATCGAT 1 cut(s) 131
BsiHKAI GWGCWC 1 cut(s) 639
BsiHKCI CYCGRG 2 cut(s) 40, 559
BsiSI CCGG 4 cut(s) 41, 279, 784, 1001
BslFI GGGAC 3 cut(s) 57, 576, 994
BslI CCNNNNNNNGG 7 cut(s) 53, 54, 435, 593, 774, 862, 1274
BsmAI GTCTC 1 cut(s) 1258
BsmFI GGGAC 3 cut(s) 57, 576, 994
BsmI GAATGC 1 cut(s) 1220
BsnI GGCC 3 cut(s) 428, 549, 998
Bso31I GGTCTC 1 cut(s) 1258
BsoBI CYCGRG 2 cut(s) 40, 559
Bsp1286I GDGCHC 2 cut(s) 639, 1244
Bsp143I GATC 5 cut(s) 34, 57, 156, 589, 1198
Bsp1720I GCTNAGC 2 cut(s) 805, 933
BspACI CCGC 3 cut(s) 90, 679, 949
BspANI GGCC 3 cut(s) 428, 549, 998
BspCNI CTCAG 2 cut(s) 174, 625
BspDI ATCGAT 1 cut(s) 131
BspFNI CGCG 1 cut(s) 949
BspHI TCATGA 1 cut(s) 721
BspLI GGNNCC 4 cut(s) 36, 45, 46, 999
BspMAI CTGCAG 1 cut(s) 502
BspOI GCTAGC 1 cut(s) 1029
BspPI GGATC 5 cut(s) 29, 42, 65, 151, 1193
BspTNI GGTCTC 1 cut(s) 1258
BsrDI GCAATG 2 cut(s) 779, 1310
BssECI CCNNGG 6 cut(s) 39, 40, 114, 550, 999, 1065
BssMI GATC 5 cut(s) 34, 57, 156, 589, 1198
BssT1I CCWWGG 3 cut(s) 114, 550, 1065
Bst2UI CCWGG 2 cut(s) 641, 698
Bst4CI ACNGT 2 cut(s) 259, 1352
Bst6I CTCTTC 1 cut(s) 608
BstAPI GCANNNNNTGC 1 cut(s) 392
BstBAI YACGTR 1 cut(s) 1328
BstC8I GCNNGC 3 cut(s) 94, 729, 1027
BstDEI CTNAG 6 cut(s) 161, 633, 799, 805, 909, 933
BstF5I GGATG 1 cut(s) 719
BstFNI CGCG 1 cut(s) 949
BstH2I RGCGCY 1 cut(s) 1310
BstHHI GCGC 2 cut(s) 949, 1309
BstKTI GATC 5 cut(s) 37, 60, 159, 592, 1201
BstMAI GTCTC 1 cut(s) 1258
BstMBI GATC 5 cut(s) 34, 57, 156, 589, 1198
BstMWI GCNNNNNNNGC 5 cut(s) 89, 392, 555, 733, 1306
BstNI CCWGG 2 cut(s) 641, 698
BstNSI RCATGY 2 cut(s) 1045, 1117
BstSCI CCNGG 5 cut(s) 39, 40, 639, 696, 999
BstSFI CTRYAG 1 cut(s) 498
BstSLI GKGCMC 1 cut(s) 1244
BstUI CGCG 1 cut(s) 949
BstV1I GCAGC 5 cut(s) 120, 259, 484, 1163, 1181
BstV2I GAAGAC 2 cut(s) 289, 374
BstX2I RGATCY 3 cut(s) 34, 156, 589
BstYI RGATCY 3 cut(s) 34, 156, 589
Bsu15I ATCGAT 1 cut(s) 131
Bsu36I CCTNAGG 1 cut(s) 799
BsuRI GGCC 3 cut(s) 428, 549, 998
BsuTUI ATCGAT 1 cut(s) 131
BtsCI GGATG 1 cut(s) 719
BtsI GCAGTG 2 cut(s) 390, 507
BtsIMutI CAGTG 3 cut(s) 169, 390, 507
Cac8I GCNNGC 3 cut(s) 94, 729, 1027
CaiI CAGNNNCTG 1 cut(s) 392
CciI TCATGA 1 cut(s) 721
CfoI GCGC 2 cut(s) 949, 1309
Cfr13I GGNCC 2 cut(s) 44, 997
Cfr9I CCCGGG 1 cut(s) 40
ClaI ATCGAT 1 cut(s) 131
CsiI ACCWGGT 1 cut(s) 696
Csp6I GTAC 3 cut(s) 201, 416, 787
CspCI CAANNNNNGTGG 2 cut(s) 954, 989
CviAII CATG 8 cut(s) 50, 312, 479, 722, 830, 994, 1042, 1114
CviQI GTAC 3 cut(s) 201, 416, 787
DdeI CTNAG 6 cut(s) 161, 633, 799, 805, 909, 933
DpnI GATC 5 cut(s) 36, 59, 158, 591, 1200
DpnII GATC 5 cut(s) 34, 57, 156, 589, 1198
Eam1104I CTCTTC 1 cut(s) 608
EarI CTCTTC 1 cut(s) 608
Eco130I CCWWGG 3 cut(s) 114, 550, 1065
Eco31I GGTCTC 1 cut(s) 1258
Eco47I GGWCC 1 cut(s) 44
Eco72I CACGTG 1 cut(s) 1328
Eco81I CCTNAGG 1 cut(s) 799
Eco88I CYCGRG 2 cut(s) 40, 559
EcoO109I RGGNCCY 1 cut(s) 44
EcoRI GAATTC 2 cut(s) 227, 317
EcoRII CCWGG 2 cut(s) 639, 696
EcoT14I CCWWGG 3 cut(s) 114, 550, 1065
ErhI CCWWGG 3 cut(s) 114, 550, 1065
FaeI CATG 8 cut(s) 53, 315, 482, 725, 833, 997, 1045, 1117
FaqI GGGAC 3 cut(s) 57, 576, 994
FatI CATG 8 cut(s) 49, 311, 478, 721, 829, 993, 1041, 1113
Fnu4HI GCNGC 6 cut(s) 109, 273, 498, 679, 1152, 1170
FokI GGATG 1 cut(s) 726
Fsp4HI GCNGC 6 cut(s) 109, 273, 498, 679, 1152, 1170
FspBI CTAG 4 cut(s) 198, 545, 960, 1026
GlaI GCGC 2 cut(s) 948, 1308
GluI GCNGC 6 cut(s) 109, 273, 498, 679, 1152, 1170
GsuI CTGGAG 1 cut(s) 495
HaeII RGCGCY 1 cut(s) 1310
HaeIII GGCC 3 cut(s) 428, 549, 998
HapII CCGG 4 cut(s) 41, 279, 784, 1001
HhaI GCGC 2 cut(s) 949, 1309
Hin1II CATG 8 cut(s) 53, 315, 482, 725, 833, 997, 1045, 1117
Hin6I GCGC 2 cut(s) 947, 1307
HinP1I GCGC 2 cut(s) 947, 1307
HindIII AAGCTT 3 cut(s) 734, 911, 935
HinfI GANTC 5 cut(s) 335, 579, 618, 629, 1034
HpaII CCGG 4 cut(s) 41, 279, 784, 1001
HphI GGTGA 3 cut(s) 358, 646, 1238
Hpy166II GTNNAC 1 cut(s) 448
Hpy188I TCNGA 3 cut(s) 340, 634, 1039
Hpy188III TCNNGA 3 cut(s) 376, 561, 722
Hpy8I GTNNAC 1 cut(s) 448
HpyAV CCTTC 7 cut(s) 467, 516, 534, 827, 866, 1077, 1282
HpyCH4III ACNGT 2 cut(s) 259, 1352
HpyCH4IV ACGT 1 cut(s) 1327
HpyCH4V TGCA 6 cut(s) 500, 530, 703, 772, 839, 1151
HpyF10VI GCNNNNNNNGC 5 cut(s) 89, 392, 555, 733, 1306
HpyF3I CTNAG 6 cut(s) 161, 633, 799, 805, 909, 933
HpySE526I ACGT 1 cut(s) 1327
Hsp92II CATG 8 cut(s) 53, 315, 482, 725, 833, 997, 1045, 1117
HspAI GCGC 2 cut(s) 947, 1307
KflI GGGWCCC 1 cut(s) 44
Kzo9I GATC 5 cut(s) 34, 57, 156, 589, 1198
Lsp1109I GCAGC 5 cut(s) 120, 259, 484, 1163, 1181
LweI GCATC 4 cut(s) 730, 826, 934, 1351
MabI ACCWGGT 1 cut(s) 696
MaeI CTAG 4 cut(s) 198, 545, 960, 1026
MaeII ACGT 1 cut(s) 1327
MaeIII GTNAC 2 cut(s) 253, 388
MalI GATC 5 cut(s) 36, 59, 158, 591, 1200
MboI GATC 5 cut(s) 34, 57, 156, 589, 1198
MboII GAAGA 4 cut(s) 294, 379, 625, 845
MflI RGATCY 3 cut(s) 34, 156, 589
MhlI GDGCHC 2 cut(s) 639, 1244
MluCI AATT 4 cut(s) 227, 317, 322, 648
MlyI GAGTC 2 cut(s) 588, 1043
MmeI TCCRAC 2 cut(s) 312, 1017
MnlI CCTC 9 cut(s) 170, 175, 219, 337, 548, 569, 948, 1014, 1259
MroXI GAANNNNTTC 2 cut(s) 371, 650
MseI TTAA 4 cut(s) 123, 683, 870, 1223
MslI CAYNNNNRTG 2 cut(s) 492, 834
MspA1I CMGCKG 2 cut(s) 272, 1172
MspI CCGG 4 cut(s) 41, 279, 784, 1001
MspR9I CCNGG 5 cut(s) 41, 42, 641, 698, 1001
Mva1269I GAATGC 1 cut(s) 1220
MvaI CCWGG 2 cut(s) 641, 698
MvnI CGCG 1 cut(s) 949
MwoI GCNNNNNNNGC 5 cut(s) 89, 392, 555, 733, 1306
NciI CCSGG 3 cut(s) 41, 42, 1001
NdeII GATC 5 cut(s) 34, 57, 156, 589, 1198
NheI GCTAGC 1 cut(s) 1025
NlaIII CATG 8 cut(s) 53, 315, 482, 725, 833, 997, 1045, 1117
NlaIV GGNNCC 4 cut(s) 36, 45, 46, 999
NmuCI GTSAC 1 cut(s) 388
NspI RCATGY 2 cut(s) 1045, 1117
PagI TCATGA 1 cut(s) 721
PciI ACATGT 1 cut(s) 1041
PctI GAATGC 1 cut(s) 1220
PdmI GAANNNNTTC 2 cut(s) 371, 650
PfeI GAWTC 3 cut(s) 335, 618, 629
PflMI CCANNNNNTGG 1 cut(s) 593
PkrI GCNGC 6 cut(s) 110, 274, 499, 680, 1153, 1171
PleI GAGTC 2 cut(s) 587, 1042
PmaCI CACGTG 1 cut(s) 1328
PmlI CACGTG 1 cut(s) 1328
PpsI GAGTC 2 cut(s) 587, 1042
Ppu21I YACGTR 1 cut(s) 1328
PpuMI RGGWCCY 1 cut(s) 44
PscI ACATGT 1 cut(s) 1041
Psp5II RGGWCCY 1 cut(s) 44
Psp6I CCWGG 2 cut(s) 639, 696
PspCI CACGTG 1 cut(s) 1328
PspGI CCWGG 2 cut(s) 639, 696
PspN4I GGNNCC 4 cut(s) 36, 45, 46, 999
PspPI GGNCC 2 cut(s) 44, 997
PspPPI RGGWCCY 1 cut(s) 44
PstI CTGCAG 1 cut(s) 502
PstNI CAGNNNCTG 1 cut(s) 392
PsuI RGATCY 3 cut(s) 34, 156, 589
PvuII CAGCTG 2 cut(s) 272, 1172
RsaI GTAC 3 cut(s) 202, 417, 788
RsaNI GTAC 3 cut(s) 201, 416, 787
RseI CAYNNNNRTG 2 cut(s) 492, 834
SaqAI TTAA 4 cut(s) 123, 683, 870, 1223
SatI GCNGC 6 cut(s) 109, 273, 498, 679, 1152, 1170
Sau3AI GATC 5 cut(s) 34, 57, 156, 589, 1198
Sau96I GGNCC 2 cut(s) 44, 997
ScaI AGTACT 1 cut(s) 202
SchI GAGTC 2 cut(s) 588, 1043
ScrFI CCNGG 5 cut(s) 41, 42, 641, 698, 1001
SduI GDGCHC 2 cut(s) 639, 1244
SexAI ACCWGGT 1 cut(s) 696
SfaNI GCATC 4 cut(s) 730, 826, 934, 1351
SfcI CTRYAG 1 cut(s) 498
SinI GGWCC 1 cut(s) 44
SmaI CCCGGG 1 cut(s) 42
SmiMI CAYNNNNRTG 2 cut(s) 492, 834
SmlI CTYRAG 1 cut(s) 1163
SmoI CTYRAG 1 cut(s) 1163
Sse9I AATT 4 cut(s) 227, 317, 322, 648
SsiI CCGC 3 cut(s) 90, 679, 949
SspI AATATT 3 cut(s) 238, 469, 848
SspMI CTAG 4 cut(s) 198, 545, 960, 1026
StyD4I CCNGG 5 cut(s) 39, 40, 639, 696, 999
StyI CCWWGG 3 cut(s) 114, 550, 1065
TaaI ACNGT 2 cut(s) 259, 1352
TaiI ACGT 1 cut(s) 1330
TaqI TCGA 4 cut(s) 131, 225, 812, 1125
TasI AATT 4 cut(s) 227, 317, 322, 648
TatI WGTACW 1 cut(s) 200
TauI GCSGC 1 cut(s) 681
TfiI GAWTC 3 cut(s) 335, 618, 629
Tru1I TTAA 4 cut(s) 123, 683, 870, 1223
Tru9I TTAA 4 cut(s) 123, 683, 870, 1223
TscAI CASTG 3 cut(s) 169, 397, 507
TseFI GTSAC 1 cut(s) 388
TseI GCWGC 5 cut(s) 108, 272, 497, 1151, 1169
Tsp45I GTSAC 1 cut(s) 388
TspDTI ATGAA 7 cut(s) 495, 675, 697, 809, 846, 1205, 1301
TspMI CCCGGG 1 cut(s) 40
TspRI CASTG 3 cut(s) 169, 397, 507
Van91I CCANNNNNTGG 1 cut(s) 593
VpaK11BI GGWCC 1 cut(s) 44
XapI RAATTY 3 cut(s) 227, 317, 648
XceI RCATGY 2 cut(s) 1045, 1117
XcmI CCANNNNNNNNNTGG 1 cut(s) 1125
XmaI CCCGGG 1 cut(s) 40
XmnI GAANNNNTTC 2 cut(s) 371, 650
XspI CTAG 4 cut(s) 198, 545, 960, 1026
ZrmI AGTACT 1 cut(s) 202
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.