Rmu_ssc0000100.1_g000012

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000100.1
Physical Location & Seq
Forward (+)
42464 .. 44446
1983 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000100.1_g000012.1.cds

Sequence Viewer

Length: 1983 bp
atggaagttgtccacgttcactcaccaaagctttacctccttcttctacttctctcctttctcttagctccttacgcaactccattaaccttcgagttccccagcttcagtgccgatgacatattcgtcgaaggagatgccgccatcgacccccaattcatccgcctcaccaaaagcactgcagcccaagtacagaacgggcggagcgtcggtcgagccacctacagcaaaccaatcatgctgcgagaacccgtcgatttcaccacagatttcgtgttcaccattagtcctgctaacaaggagaactatggtgatgggctcgccttcttcatagcagcgaacggatccttgctcgacggcacagtaggatctggtagcagtctaggcctccccgtcgatgaccagcacccgttcgtggcggggacgtttgacatcaactccggcagctacagcctgggtattaacctcaactccgtcgattctagcaacaccgcgctggtggatggtgtcaccatggaaggacaacaaaatagtggtacgattacttatgattctggctggcttaaagtttcggtttcaactacctatgattctggcacaaaatggcgtaatctctccaggactgtgaatctgcaagactactttccggagagtgtgatcgttgttggtttctcagcttcaacgggctctgcattcgctcagcataagatcatctcgtggaagtttacttcaacttctgctgctcttgttccttctagcccaacccaaaaaaatgattctctagttcctactggccaaacaaacaaaaacgaatctcaagtagtacttcctactgcaccgggcccgagttctaaagccgagccaagaaaacacagaataacacgggcggttgtgatcgcttgtattactattggcggaattatcttgcttgggttgtttgtttggttcaagttgaggaataggaaatcagaaatagatgaatgttcatctgaacagcctatgattcgtgacccgattgatgtccaatttgaaaaggagactggccccaggaagttttcatacacagagttggctttggcaacaagtaattttgatgaggaaaagaagcttggagagggaggatttggtgcggtttacaaaggcgtcataaatgacttgaagttcgatgttgctgtagatgttgctgtgaagaagatatcaccagaatctcgacaaggcctcaaggagtatatagcagaagtacaaacaattagtgcacttcggcatcgacatctggtgcaactcatcggttggtgccacgaaaaaggagaattcctacttgtctacaagttcatacccaatggaagtttagacacacatctgtttaaagatactaacatgttaagttgggaggaccgatacagaattgttaaagaattggcctcggtgttattctacctgcaggaacaatgcggcgatcatcaatatgtgttgcacagggatatcaaatcgagcaacatcatgttagatttggatttcactgcgaaacttggggatttcggtttagctcagcttctagatcatggacaacctttgaaaacaacacatgctgctggaactaggggttacatggctccagaatacattaccaccaaagtggctaccaagaaatcagatgtctacagctttggaattgttgctttggaaatagcatgtgggaggaaacccagcgttgccacgccggaaaatgggaaatgcgatatagtggagtgggtttgggaactctatggggaacgtaaaattcttcaagcagctgacccaaaactaagtacacattttgatgagaaacaaatgacgtgcttgatggttgttgggttatggtgtgctcatcccgattacagcaatagggcttcaatagaacaagcgattgaagtgctcaacttcagagctgaattacctcatctccctccaaagatgccagtggcaaccttccttcctgaataa

Protein Analysis

660

Amino Acids

72.87

Weight (kDa)

5.79

Isoelectric Point (pI)

33.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 125
Acc36I ACCTGC 1 cut(s) 1446
AccB1I GGYRCC 1 cut(s) 1293
AccI GTMKAC 2 cut(s) 1323, 1659
AccII CGCG 1 cut(s) 494
AccIII TCCGGA 1 cut(s) 646
AciI CCGC 9 cut(s) 141, 163, 202, 419, 492, 887, 915, 1130, 1452
AclWI GGATC 3 cut(s) 339, 352, 376
AcoI YGGCCR 1 cut(s) 793
AcsI RAATTY 2 cut(s) 1310, 1779
AcuI CTGAAG 2 cut(s) 91, 1906
AcyI GRCGYC 1 cut(s) 1143
AfaI GTAC 5 cut(s) 192, 538, 825, 1242, 1810
AfiI CCNNNNNNNGG 2 cut(s) 415, 1727
AflIII ACRYGT 1 cut(s) 1377
AjiI CACGTC 1 cut(s) 1836
AjnI CCWGG 3 cut(s) 453, 617, 1046
AjuI GAANNNNNNNTTGG 2 cut(s) 1092, 1124
AleI CACNNNNGTG 1 cut(s) 1634
Alw21I GWGCWC 3 cut(s) 1258, 1867, 1917
Alw26I GTCTC 1 cut(s) 1031
Alw44I GTGCAC 1 cut(s) 1254
AlwI GGATC 3 cut(s) 339, 352, 376
Ama87I CYCGRG 1 cut(s) 844
Aor13HI TCCGGA 1 cut(s) 646
AoxI GGCC 6 cut(s) 385, 793, 841, 1042, 1216, 1419
ApaI GGGCCC 1 cut(s) 845
ApaLI GTGCAC 1 cut(s) 1254
ApeKI GCWGC 7 cut(s) 182, 241, 335, 444, 740, 1589, 1790
ApoI RAATTY 2 cut(s) 1310, 1779
ArsI GACNNNNNNTTYG 2 cut(s) 1145, 1177
AspLEI GCGC 1 cut(s) 496
AspS9I GGNCC 4 cut(s) 841, 842, 1043, 1393
AsuC2I CCSGG 1 cut(s) 840
AsuHPI GGTGA 7 cut(s) 15, 160, 253, 271, 323, 502, 1191
AvaI CYCGRG 1 cut(s) 844
AvaII GGWCC 1 cut(s) 1393
BaeGI GKGCMC 2 cut(s) 845, 1258
BalI TGGCCA 1 cut(s) 795
BamHI GGATCC 1 cut(s) 344
BanI GGYRCC 1 cut(s) 1293
BanII GRGCYC 3 cut(s) 321, 689, 845
BarI GAAGNNNNNNTAC 2 cut(s) 1043, 1075
BauI CACGAG 1 cut(s) 715
Bbv12I GWGCWC 3 cut(s) 1258, 1867, 1917
BbvI GCAGC 7 cut(s) 194, 228, 347, 456, 727, 1576, 1802
BccI CCATC 4 cut(s) 152, 308, 497, 1837
BceAI ACGGC 1 cut(s) 373
BcgI CGANNNNNNTGC 4 cut(s) 119, 153, 1894, 1928
BciT130I CCWGG 3 cut(s) 455, 619, 1048
BcnI CCSGG 1 cut(s) 840
BcoDI GTCTC 1 cut(s) 1031
BfaI CTAG 6 cut(s) 383, 483, 756, 782, 1556, 1599
BfmI CTRYAG 6 cut(s) 180, 223, 448, 1173, 1439, 1660
BfuAI ACCTGC 1 cut(s) 1446
BisI GCNGC 9 cut(s) 141, 183, 242, 336, 445, 741, 1453, 1590, 1791
BlpI GCTNAGC 2 cut(s) 699, 1548
BlsI GCNGC 9 cut(s) 142, 184, 243, 337, 446, 742, 1454, 1591, 1792
BmcAI AGTACT 1 cut(s) 825
Bme1390I CCNGG 4 cut(s) 455, 619, 840, 1048
Bme18I GGWCC 1 cut(s) 1393
BmeT110I CYCGRG 1 cut(s) 844
BmgBI CACGTC 1 cut(s) 1836
BmgT120I GGNCC 4 cut(s) 841, 842, 1043, 1393
BmiI GGNNCC 5 cut(s) 346, 843, 1045, 1295, 1614
BmrFI CCNGG 4 cut(s) 455, 619, 840, 1048
BmsI GCATC 3 cut(s) 127, 1273, 1944
BpmI CTGGAG 2 cut(s) 601, 1599
Bpu1102I GCTNAGC 2 cut(s) 699, 1548
BpuEI CTTGAG 2 cut(s) 801, 1205
BpuMI CCSGG 1 cut(s) 840
BsaHI GRCGYC 1 cut(s) 1143
BsaJI CCNNGG 4 cut(s) 454, 513, 1046, 1422
BsaWI WCCGGW 1 cut(s) 646
BsaXI ACNNNNNCTCC 8 cut(s) 196, 226, 422, 452, 455, 485, 1926, 1956
Bsc4I CCNNNNNNNGG 2 cut(s) 415, 1727
Bse1I ACTGG 3 cut(s) 796, 1045, 1958
BseAI TCCGGA 1 cut(s) 646
BseBI CCWGG 3 cut(s) 455, 619, 1048
BseDI CCNNGG 4 cut(s) 454, 513, 1046, 1422
BseGI GGATG 3 cut(s) 159, 508, 1867
BseLI CCNNNNNNNGG 2 cut(s) 415, 1727
BseMII CTCAG 3 cut(s) 687, 713, 1562
BseNI ACTGG 3 cut(s) 796, 1045, 1958
BseSI GKGCMC 2 cut(s) 845, 1258
BseXI GCAGC 7 cut(s) 194, 228, 347, 456, 727, 1576, 1802
BseYI CCCAGC 2 cut(s) 101, 1706
BsgI GTGCAG 1 cut(s) 819
Bsh1236I CGCG 1 cut(s) 494
Bsh1285I CGRYCG 1 cut(s) 214
BshFI GGCC 6 cut(s) 387, 795, 843, 1044, 1218, 1421
BshNI GGYRCC 1 cut(s) 1293
BsiEI CGRYCG 1 cut(s) 214
BsiHKAI GWGCWC 3 cut(s) 1258, 1867, 1917
BsiHKCI CYCGRG 1 cut(s) 844
BsiSI CCGG 4 cut(s) 441, 647, 839, 1721
BslFI GGGAC 1 cut(s) 436
BslI CCNNNNNNNGG 2 cut(s) 415, 1727
BsmAI GTCTC 1 cut(s) 1031
BsmFI GGGAC 1 cut(s) 436
BsmI GAATGC 1 cut(s) 692
BsnI GGCC 6 cut(s) 387, 795, 843, 1044, 1218, 1421
BsoBI CYCGRG 1 cut(s) 844
Bsp120I GGGCCC 1 cut(s) 841
Bsp1286I GDGCHC 6 cut(s) 321, 689, 845, 1258, 1867, 1917
Bsp13I TCCGGA 1 cut(s) 646
Bsp143I GATC 7 cut(s) 344, 368, 657, 708, 894, 1456, 1558
Bsp1720I GCTNAGC 2 cut(s) 699, 1548
Bsp19I CCATGG 1 cut(s) 513
BspACI CCGC 9 cut(s) 141, 163, 202, 419, 492, 887, 915, 1130, 1452
BspANI GGCC 6 cut(s) 387, 795, 843, 1044, 1218, 1421
BspCNI CTCAG 3 cut(s) 686, 712, 1561
BspEI TCCGGA 1 cut(s) 646
BspFNI CGCG 1 cut(s) 494
BspLI GGNNCC 5 cut(s) 346, 843, 1045, 1295, 1614
BspMAI CTGCAG 2 cut(s) 184, 1443
BspMI ACCTGC 1 cut(s) 1446
BspPI GGATC 3 cut(s) 339, 352, 376
BspT107I GGYRCC 1 cut(s) 1293
BsrI ACTGG 3 cut(s) 796, 1045, 1958
BssECI CCNNGG 4 cut(s) 454, 513, 1046, 1422
BssMI GATC 7 cut(s) 344, 368, 657, 708, 894, 1456, 1558
BssNI GRCGYC 1 cut(s) 1143
BssSI CACGAG 1 cut(s) 715
BssT1I CCWWGG 1 cut(s) 513
Bst2BI CACGAG 1 cut(s) 715
Bst2UI CCWGG 3 cut(s) 455, 619, 1048
Bst4CI ACNGT 2 cut(s) 364, 625
BstACI GRCGYC 1 cut(s) 1143
BstC8I GCNNGC 2 cut(s) 321, 560
BstDEI CTNAG 5 cut(s) 64, 673, 699, 1548, 1805
BstDSI CCRYGG 1 cut(s) 513
BstF5I GGATG 3 cut(s) 159, 508, 1867
BstFNI CGCG 1 cut(s) 494
BstHHI GCGC 1 cut(s) 496
BstKTI GATC 7 cut(s) 347, 371, 660, 711, 897, 1459, 1561
BstMAI GTCTC 1 cut(s) 1031
BstMBI GATC 7 cut(s) 344, 368, 657, 708, 894, 1456, 1558
BstMCI CGRYCG 1 cut(s) 214
BstMWI GCNNNNNNNGC 3 cut(s) 74, 384, 450
BstNI CCWGG 3 cut(s) 455, 619, 1048
BstNSI RCATGY 3 cut(s) 1381, 1589, 1695
BstSCI CCNGG 4 cut(s) 453, 617, 838, 1046
BstSFI CTRYAG 6 cut(s) 180, 223, 448, 1173, 1439, 1660
BstSLI GKGCMC 2 cut(s) 845, 1258
BstUI CGCG 1 cut(s) 494
BstV1I GCAGC 7 cut(s) 194, 228, 347, 456, 727, 1576, 1802
BstX2I RGATCY 2 cut(s) 344, 368
BstXI CCANNNNNNTGG 1 cut(s) 1636
BstYI RGATCY 2 cut(s) 344, 368
BsuRI GGCC 6 cut(s) 387, 795, 843, 1044, 1218, 1421
BtgI CCRYGG 1 cut(s) 513
BtrI CACGTC 1 cut(s) 1836
BtsCI GGATG 3 cut(s) 159, 508, 1867
BtsI GCAGTG 2 cut(s) 177, 1518
BtsIMutI CAGTG 4 cut(s) 115, 177, 1518, 1965
BveI ACCTGC 1 cut(s) 1446
Cac8I GCNNGC 2 cut(s) 321, 560
CfoI GCGC 1 cut(s) 496
Cfr13I GGNCC 4 cut(s) 841, 842, 1043, 1393
CseI GACGC 2 cut(s) 196, 1132
Csp6I GTAC 5 cut(s) 191, 537, 824, 1241, 1809
CviAII CATG 8 cut(s) 238, 514, 1378, 1501, 1562, 1586, 1609, 1692
CviQI GTAC 5 cut(s) 191, 537, 824, 1241, 1809
DdeI CTNAG 5 cut(s) 64, 673, 699, 1548, 1805
DpnI GATC 7 cut(s) 346, 370, 659, 710, 896, 1458, 1560
DpnII GATC 7 cut(s) 344, 368, 657, 708, 894, 1456, 1558
DraI TTTAAA 1 cut(s) 1366
DrdI GACNNNNNNGTC 1 cut(s) 125
DseDI GACNNNNNNGTC 1 cut(s) 125
EaeI YGGCCR 1 cut(s) 793
EciI GGCGGA 3 cut(s) 152, 217, 930
Eco130I CCWWGG 1 cut(s) 513
Eco147I AGGCCT 2 cut(s) 387, 1218
Eco24I GRGCYC 3 cut(s) 321, 689, 845
Eco32I GATATC 2 cut(s) 1197, 1483
Eco47I GGWCC 1 cut(s) 1393
Eco57I CTGAAG 2 cut(s) 91, 1906
Eco88I CYCGRG 1 cut(s) 844
EcoRI GAATTC 1 cut(s) 1310
EcoRII CCWGG 3 cut(s) 453, 617, 1046
EcoRV GATATC 2 cut(s) 1197, 1483
EcoT14I CCWWGG 1 cut(s) 513
EcoT38I GRGCYC 3 cut(s) 321, 689, 845
ErhI CCWWGG 1 cut(s) 513
FaeI CATG 8 cut(s) 241, 517, 1381, 1504, 1565, 1589, 1612, 1695
FalI AAGNNNNNCTT 2 cut(s) 810, 842
FaqI GGGAC 1 cut(s) 436
FatI CATG 8 cut(s) 237, 513, 1377, 1500, 1561, 1585, 1608, 1691
FauI CCCGC 1 cut(s) 412
FblI GTMKAC 2 cut(s) 1323, 1659
Fnu4HI GCNGC 9 cut(s) 141, 183, 242, 336, 445, 741, 1453, 1590, 1791
FokI GGATG 3 cut(s) 146, 515, 1854
FriOI GRGCYC 3 cut(s) 321, 689, 845
Fsp4HI GCNGC 9 cut(s) 141, 183, 242, 336, 445, 741, 1453, 1590, 1791
FspBI CTAG 6 cut(s) 383, 483, 756, 782, 1556, 1599
GlaI GCGC 1 cut(s) 495
GluI GCNGC 9 cut(s) 141, 183, 242, 336, 445, 741, 1453, 1590, 1791
GsaI CCCAGC 2 cut(s) 105, 1710
GsuI CTGGAG 2 cut(s) 601, 1599
HaeIII GGCC 6 cut(s) 387, 795, 843, 1044, 1218, 1421
HapII CCGG 4 cut(s) 441, 647, 839, 1721
HgaI GACGC 2 cut(s) 196, 1132
HhaI GCGC 1 cut(s) 496
Hin1I GRCGYC 1 cut(s) 1143
Hin1II CATG 8 cut(s) 241, 517, 1381, 1504, 1565, 1589, 1612, 1695
Hin6I GCGC 1 cut(s) 494
HinP1I GCGC 1 cut(s) 494
HindIII AAGCTT 2 cut(s) 29, 1106
HinfI GANTC 8 cut(s) 479, 551, 590, 628, 776, 812, 1003, 1205
HpaII CCGG 4 cut(s) 441, 647, 839, 1721
HphI GGTGA 7 cut(s) 15, 160, 253, 271, 323, 502, 1191
Hpy166II GTNNAC 9 cut(s) 13, 19, 279, 726, 1135, 1256, 1324, 1660, 1811
Hpy188I TCNGA 4 cut(s) 970, 991, 1654, 1925
Hpy188III TCNNGA 7 cut(s) 647, 1007, 1209, 1556, 1616, 1871, 1976
Hpy8I GTNNAC 9 cut(s) 13, 19, 279, 726, 1135, 1256, 1324, 1660, 1811
Hpy99I CGWCG 6 cut(s) 131, 212, 257, 359, 398, 479
HpyAV CCTTC 8 cut(s) 50, 100, 125, 334, 512, 762, 1978, 1982
HpyCH4III ACNGT 2 cut(s) 364, 625
HpyCH4IV ACGT 4 cut(s) 15, 425, 1774, 1835
HpyCH4V TGCA 8 cut(s) 182, 634, 692, 836, 1256, 1279, 1441, 1474
HpyF10VI GCNNNNNNNGC 3 cut(s) 74, 384, 450
HpyF3I CTNAG 5 cut(s) 64, 673, 699, 1548, 1805
HpySE526I ACGT 4 cut(s) 15, 425, 1774, 1835
Hsp92I GRCGYC 1 cut(s) 1143
Hsp92II CATG 8 cut(s) 241, 517, 1381, 1504, 1565, 1589, 1612, 1695
HspAI GCGC 1 cut(s) 494
Kpn2I TCCGGA 1 cut(s) 646
Kzo9I GATC 7 cut(s) 344, 368, 657, 708, 894, 1456, 1558
LmnI GCTCC 3 cut(s) 73, 204, 1618
Lsp1109I GCAGC 7 cut(s) 194, 228, 347, 456, 727, 1576, 1802
LweI GCATC 3 cut(s) 127, 1273, 1944
MaeI CTAG 6 cut(s) 383, 483, 756, 782, 1556, 1599
MaeII ACGT 4 cut(s) 15, 425, 1774, 1835
MaeIII GTNAC 3 cut(s) 508, 1007, 1604
MalI GATC 7 cut(s) 346, 370, 659, 710, 896, 1458, 1560
MboI GATC 7 cut(s) 344, 368, 657, 708, 894, 1456, 1558
MboII GAAGA 5 cut(s) 35, 319, 1201, 1204, 1775
MflI RGATCY 2 cut(s) 344, 368
MhlI GDGCHC 6 cut(s) 321, 689, 845, 1258, 1867, 1917
MlsI TGGCCA 1 cut(s) 795
MluNI TGGCCA 1 cut(s) 795
Mox20I TGGCCA 1 cut(s) 795
MroI TCCGGA 1 cut(s) 646
MscI TGGCCA 1 cut(s) 795
MseI TTAA 6 cut(s) 86, 462, 564, 1365, 1382, 1410
MslI CAYNNNNRTG 3 cut(s) 1464, 1634, 1818
Msp20I TGGCCA 1 cut(s) 795
MspA1I CMGCKG 1 cut(s) 1793
MspI CCGG 4 cut(s) 441, 647, 839, 1721
MspR9I CCNGG 4 cut(s) 455, 619, 840, 1048
Mva1269I GAATGC 1 cut(s) 692
MvaI CCWGG 3 cut(s) 455, 619, 1048
MvnI CGCG 1 cut(s) 494
MwoI GCNNNNNNNGC 3 cut(s) 74, 384, 450
NciI CCSGG 1 cut(s) 840
NcoI CCATGG 1 cut(s) 513
NdeII GATC 7 cut(s) 344, 368, 657, 708, 894, 1456, 1558
NlaIII CATG 8 cut(s) 241, 517, 1381, 1504, 1565, 1589, 1612, 1695
NlaIV GGNNCC 5 cut(s) 346, 843, 1045, 1295, 1614
NmeAIII GCCGAG 1 cut(s) 883
NmuCI GTSAC 2 cut(s) 508, 1007
NspI RCATGY 3 cut(s) 1381, 1589, 1695
OliI CACNNNNGTG 1 cut(s) 1634
PceI AGGCCT 2 cut(s) 387, 1218
PciI ACATGT 1 cut(s) 1377
PcsI WCGNNNNNNNCGW 1 cut(s) 204
PctI GAATGC 1 cut(s) 692
PfeI GAWTC 8 cut(s) 479, 551, 590, 628, 776, 812, 1003, 1205
PfoI TCCNGGA 1 cut(s) 617
PkrI GCNGC 9 cut(s) 142, 184, 243, 337, 446, 742, 1454, 1591, 1792
PscI ACATGT 1 cut(s) 1377
Psp6I CCWGG 3 cut(s) 453, 617, 1046
PspFI CCCAGC 2 cut(s) 101, 1706
PspGI CCWGG 3 cut(s) 453, 617, 1046
PspN4I GGNNCC 5 cut(s) 346, 843, 1045, 1295, 1614
PspOMI GGGCCC 1 cut(s) 841
PspPI GGNCC 4 cut(s) 841, 842, 1043, 1393
PstI CTGCAG 2 cut(s) 184, 1443
PsuI RGATCY 2 cut(s) 344, 368
PvuII CAGCTG 1 cut(s) 1793
RsaI GTAC 5 cut(s) 192, 538, 825, 1242, 1810
RsaNI GTAC 5 cut(s) 191, 537, 824, 1241, 1809
RseI CAYNNNNRTG 3 cut(s) 1464, 1634, 1818
SaqAI TTAA 6 cut(s) 86, 462, 564, 1365, 1382, 1410
SatI GCNGC 9 cut(s) 141, 183, 242, 336, 445, 741, 1453, 1590, 1791
Sau3AI GATC 7 cut(s) 344, 368, 657, 708, 894, 1456, 1558
Sau96I GGNCC 4 cut(s) 841, 842, 1043, 1393
SbfI CCTGCAGG 1 cut(s) 1443
ScaI AGTACT 1 cut(s) 825
ScrFI CCNGG 4 cut(s) 455, 619, 840, 1048
SdaI CCTGCAGG 1 cut(s) 1443
SduI GDGCHC 6 cut(s) 321, 689, 845, 1258, 1867, 1917
SfaNI GCATC 3 cut(s) 127, 1273, 1944
SfcI CTRYAG 6 cut(s) 180, 223, 448, 1173, 1439, 1660
SinI GGWCC 1 cut(s) 1393
SmiMI CAYNNNNRTG 3 cut(s) 1464, 1634, 1818
SmlI CTYRAG 2 cut(s) 816, 1220
SmoI CTYRAG 2 cut(s) 816, 1220
Sse8387I CCTGCAGG 1 cut(s) 1443
SseBI AGGCCT 2 cut(s) 387, 1218
SsiI CCGC 9 cut(s) 141, 163, 202, 419, 492, 887, 915, 1130, 1452
SspMI CTAG 6 cut(s) 383, 483, 756, 782, 1556, 1599
StuI AGGCCT 2 cut(s) 387, 1218
StyD4I CCNGG 4 cut(s) 453, 617, 838, 1046
StyI CCWWGG 1 cut(s) 513
TaaI ACNGT 2 cut(s) 364, 625
TaiI ACGT 4 cut(s) 18, 428, 1777, 1838
TaqII GACCGA 2 cut(s) 200, 1410
TatI WGTACW 4 cut(s) 190, 823, 1240, 1808
TauI GCSGC 2 cut(s) 143, 1455
TfiI GAWTC 8 cut(s) 479, 551, 590, 628, 776, 812, 1003, 1205
Tru1I TTAA 6 cut(s) 86, 462, 564, 1365, 1382, 1410
Tru9I TTAA 6 cut(s) 86, 462, 564, 1365, 1382, 1410
TscAI CASTG 4 cut(s) 115, 184, 1525, 1965
TseFI GTSAC 2 cut(s) 508, 1007
TseI GCWGC 7 cut(s) 182, 241, 335, 444, 740, 1589, 1790
Tsp45I GTSAC 2 cut(s) 508, 1007
TspDTI ATGAA 6 cut(s) 148, 319, 975, 993, 1047, 1321
TspGWI ACGGA 2 cut(s) 357, 463
TspRI CASTG 4 cut(s) 115, 184, 1525, 1965
VneI GTGCAC 1 cut(s) 1254
VpaK11BI GGWCC 1 cut(s) 1393
XapI RAATTY 2 cut(s) 1310, 1779
XbaI TCTAGA 1 cut(s) 1555
XceI RCATGY 3 cut(s) 1381, 1589, 1695
XmiI GTMKAC 2 cut(s) 1323, 1659
XspI CTAG 6 cut(s) 383, 483, 756, 782, 1556, 1599
ZrmI AGTACT 1 cut(s) 825
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.