Rorug05G0567400

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
76052952 .. 76055334
2383 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0567400.1

Sequence Viewer

Length: 1638 bp
ATGGCTACTGACACCAGAATTTTCCCAGACCAAAACAACAACAAGACCAAAAACAATGAGATTAACAGGGTGGAAATCCAAGCAGCCATTGCCAAAGCTGTGGAGCTTAGAGCTCTTCATGCTGCTTTGGTCCAAGGAAGCAGCCCTGCAAATCTCAGGTTCCCTTCTTCTGCTTCCCCAGCTAATTCACGCCATGCCTCTAACTTCTCTGCTCAGGACTACCCTGTTTTCACACCTAGTTATGAAGACGAACCATCATCCGGGTATCGTCAAATTCCGATGAAGAACAGAACGTTATCCGAAAGTTGGGACGAGTACGGGCTAGAAGGAAATGGGGATGAATCAGTTGTGTCAAATTACAAGGAAAACTCATCTTCAAGAAAAGGGTTTCCTTCTGATTTATCCAACTTTGAATCCCACATTTGCCCAGCTGAGGATAACAAGTCTGTCACTGGCTCATGTACAAACAACATCACCGTGCTTCAAACATCACCAGATTCTCATGCATCTACTACTACACAGTCACAACCAAAAAGTAGGGGAGTGATTTCTTGGTTGTTTCCGCGGTTAAAGAAGAAGCACAAGAATATAAGCTCTCCAACCCGGACAGAATCTGAGGAAGTTTCTCAAGCCTACAAGGATTTTGGAATCATGTCAATTGAAGTATTGAAGAAAGAGCTCATAAAAGCAAATGAGAATAGAGACTCTGCGTTAAAGGAGGTTTCTGAGATGAGATCTTCGCTTGGGGAGCTGAAGCAGAAGCTGGAGTACTTGGAAACTTACTGTGAAGAGCTGAAGAAGGCTTTGAGACAAGCAACACATGCTAATAAGAATTTCCAAATGCCAGAAAATATTGGGAATTTCCCAAACAGACCAGGAAAATCAAGTGATGGGAATGCGGAAAACTTAATGCCGGTCAGCGAGGAAGTAATGGTGGAAGGTTTCCTGCAGATAGTATCCGAAGCAAGACTTTCAGTAAGACAATTCTGCAAAATCCTTGTAGCACAAATTGAACTAACAGATAACACCTTAGTGGACAATTTGAACCTGCTTCTCCAACCATTCAAACTGTCATTGAATTCCAAGTATTCGAAAGCTGTGTCATACCATTTGGAAGCCATCATAAACCAGTCACTTTACCAAGACTTTGAGAACTGTGTGTTCCAGAAGCATGGCTCACCAAAGCTTCTAGATCCTCAACAAGCTCGCCAAGCGCAGTTTTCTTCATTCGTGGCACTAAGAAACTTAAGCTGGAATGAAGTTTTGAGAAAGGGAACGAAGTATTACTGTGAGGAATTCAGCAAGTTTTGTGATCAGAAGATGAGTTGCATCATTACAACGCTAAATTGGACTAGGCCATGGCCTGAGCAGGTTCTTCAAGCATTCTTTGTAGCTACGAAATGCATTTGGTTACTTCATTTGCTTGCGTTTTCATTCAATCCGCCGCTGGGGATATTGAGGGTGGAAGAGAATAGGAGCTTTGATCCACATTACATGGAAGACATGTTTATGGATAGGCAGAGATCACATGGTTCAAGCAGGGTTAAGATTATGGTAATGCCAGGGTTTTATGTTCAGGATAGGGTCTTAAGGTGTAAGGTTCTTTGCAGGTATAAGTCTGCAGGTCAAGCAGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

545

Amino Acids

61.85

Weight (kDa)

8.34

Isoelectric Point (pI)

58.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GIL1_IRKI_C PF24994 485 - 535 9.1e-06 GIL1/IRKI C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 5 cut(s) 1056, 1360, 1599, 1613, 1622
AccII CGCG 1 cut(s) 565
AciI CCGC 5 cut(s) 563, 565, 899, 1442, 1445
AclI AACGTT 1 cut(s) 293
AclWI GGATC 2 cut(s) 1187, 1478
AcsI RAATTY 6 cut(s) 18, 273, 832, 859, 1078, 1295
AcuI CTGAAG 2 cut(s) 773, 815
AfaI GTAC 3 cut(s) 317, 463, 770
AfiI CCNNNNNNNGG 4 cut(s) 260, 306, 433, 1448
AflII CTTAAG 2 cut(s) 1246, 1588
AflIII ACRYGT 1 cut(s) 1503
AjnI CCWGG 2 cut(s) 874, 1561
AleI CACNNNNGTG 1 cut(s) 1031
Alw21I GWGCWC 2 cut(s) 115, 681
Alw26I GTCTC 2 cut(s) 696, 802
AlwI GGATC 2 cut(s) 1187, 1478
AlwNI CAGNNNCTG 2 cut(s) 614, 763
AoxI GGCC 2 cut(s) 1355, 1361
ApeKI GCWGC 3 cut(s) 83, 122, 141
ApoI RAATTY 6 cut(s) 18, 273, 832, 859, 1078, 1295
ArsI GACNNNNNNTTYG 2 cut(s) 1085, 1117
AspLEI GCGC 1 cut(s) 1216
AspS9I GGNCC 1 cut(s) 130
AsuC2I CCSGG 2 cut(s) 262, 604
AsuHPI GGTGA 3 cut(s) 466, 483, 1170
AsuII TTCGAA 1 cut(s) 1091
AvaII GGWCC 1 cut(s) 130
BanII GRGCYC 2 cut(s) 115, 681
BarI GAAGNNNNNNTAC 2 cut(s) 752, 784
BbsI GAAGAC 2 cut(s) 252, 1506
Bbv12I GWGCWC 2 cut(s) 115, 681
BbvCI CCTCAGC 1 cut(s) 432
BbvI GCAGC 3 cut(s) 95, 109, 153
BccI CCATC 3 cut(s) 262, 884, 1127
BciT130I CCWGG 2 cut(s) 876, 1563
BciVI GTATCC 1 cut(s) 967
BclI TGATCA 1 cut(s) 1312
BcnI CCSGG 2 cut(s) 262, 604
BcoDI GTCTC 2 cut(s) 696, 802
BfaI CTAG 4 cut(s) 237, 323, 1190, 1353
BfmI CTRYAG 2 cut(s) 947, 1620
BfrI CTTAAG 2 cut(s) 1246, 1588
BfuAI ACCTGC 5 cut(s) 1056, 1360, 1599, 1613, 1622
BfuI GTATCC 1 cut(s) 967
BglII AGATCT 1 cut(s) 734
BisI GCNGC 4 cut(s) 84, 123, 142, 1445
BlsI GCNGC 4 cut(s) 85, 124, 143, 1446
BmcAI AGTACT 1 cut(s) 770
Bme1390I CCNGG 4 cut(s) 262, 604, 876, 1563
Bme18I GGWCC 1 cut(s) 130
BmgT120I GGNCC 1 cut(s) 130
BmiI GGNNCC 1 cut(s) 161
BmrFI CCNGG 4 cut(s) 262, 604, 876, 1563
BmsI GCATC 2 cut(s) 515, 1338
BpiI GAAGAC 2 cut(s) 252, 1506
BpmI CTGGAG 1 cut(s) 785
Bpu10I CCTNAGC 3 cut(s) 213, 432, 1365
Bpu14I TTCGAA 1 cut(s) 1091
BpuEI CTTGAG 1 cut(s) 612
BpuMI CCSGG 2 cut(s) 262, 604
BsaJI CCNNGG 4 cut(s) 133, 563, 1358, 1562
Bsc4I CCNNNNNNNGG 4 cut(s) 260, 306, 433, 1448
Bse118I RCCGGY 1 cut(s) 913
Bse1I ACTGG 2 cut(s) 457, 1129
Bse3DI GCAATG 1 cut(s) 87
BseBI CCWGG 2 cut(s) 876, 1563
BseDI CCNNGG 4 cut(s) 133, 563, 1358, 1562
BseGI GGATG 2 cut(s) 257, 343
BseLI CCNNNNNNNGG 4 cut(s) 260, 306, 433, 1448
BseMI GCAATG 1 cut(s) 87
BseMII CTCAG 6 cut(s) 169, 227, 423, 606, 717, 1356
BseNI ACTGG 2 cut(s) 457, 1129
BseXI GCAGC 3 cut(s) 95, 109, 153
BseYI CCCAGC 3 cut(s) 178, 427, 1447
Bsh1236I CGCG 1 cut(s) 565
BshFI GGCC 2 cut(s) 1357, 1363
BsiHKAI GWGCWC 2 cut(s) 115, 681
BsiSI CCGG 3 cut(s) 261, 604, 914
BslFI GGGAC 1 cut(s) 323
BslI CCNNNNNNNGG 4 cut(s) 260, 306, 433, 1448
BsmAI GTCTC 2 cut(s) 696, 802
BsmFI GGGAC 1 cut(s) 323
BsmI GAATGC 2 cut(s) 901, 1382
BsnI GGCC 2 cut(s) 1357, 1363
Bsp119I TTCGAA 1 cut(s) 1091
Bsp1286I GDGCHC 2 cut(s) 115, 681
Bsp1407I TGTACA 1 cut(s) 461
Bsp143I GATC 5 cut(s) 734, 1192, 1312, 1483, 1523
Bsp19I CCATGG 1 cut(s) 1358
BspACI CCGC 5 cut(s) 563, 565, 899, 1442, 1445
BspANI GGCC 2 cut(s) 1357, 1363
BspCNI CTCAG 6 cut(s) 168, 226, 424, 607, 718, 1357
BspFNI CGCG 1 cut(s) 565
BspLI GGNNCC 1 cut(s) 161
BspMAI CTGCAG 2 cut(s) 951, 1624
BspMI ACCTGC 5 cut(s) 1056, 1360, 1599, 1613, 1622
BspPI GGATC 2 cut(s) 1187, 1478
BspQI GCTCTTC 2 cut(s) 120, 783
BspT104I TTCGAA 1 cut(s) 1091
BspTI CTTAAG 2 cut(s) 1246, 1588
BsrDI GCAATG 1 cut(s) 87
BsrFI RCCGGY 1 cut(s) 913
BsrGI TGTACA 1 cut(s) 461
BsrI ACTGG 2 cut(s) 457, 1129
BssAI RCCGGY 1 cut(s) 913
BssECI CCNNGG 4 cut(s) 133, 563, 1358, 1562
BssMI GATC 5 cut(s) 734, 1192, 1312, 1483, 1523
BssT1I CCWWGG 2 cut(s) 133, 1358
Bst2UI CCWGG 2 cut(s) 876, 1563
Bst4CI ACNGT 6 cut(s) 478, 522, 785, 1071, 1157, 1289
Bst6I CTCTTC 3 cut(s) 120, 783, 1461
BstAFI CTTAAG 2 cut(s) 1246, 1588
BstAPI GCANNNNNTGC 2 cut(s) 89, 821
BstAUI TGTACA 1 cut(s) 461
BstBI TTCGAA 1 cut(s) 1091
BstC8I GCNNGC 2 cut(s) 1207, 1425
BstDEI CTNAG 9 cut(s) 107, 155, 213, 432, 615, 726, 1030, 1238, 1365
BstDSI CCRYGG 2 cut(s) 563, 1358
BstF5I GGATG 2 cut(s) 257, 343
BstFNI CGCG 1 cut(s) 565
BstHHI GCGC 1 cut(s) 1216
BstKTI GATC 5 cut(s) 737, 1195, 1315, 1486, 1526
BstMAI GTCTC 2 cut(s) 696, 802
BstMBI GATC 5 cut(s) 734, 1192, 1312, 1483, 1523
BstMWI GCNNNNNNNGC 7 cut(s) 89, 119, 179, 748, 821, 1211, 1628
BstNI CCWGG 2 cut(s) 876, 1563
BstNSI RCATGY 2 cut(s) 824, 1507
BstSCI CCNGG 4 cut(s) 260, 602, 874, 1561
BstSFI CTRYAG 2 cut(s) 947, 1620
BstUI CGCG 1 cut(s) 565
BstV1I GCAGC 3 cut(s) 95, 109, 153
BstV2I GAAGAC 2 cut(s) 252, 1506
BstX2I RGATCY 2 cut(s) 734, 1192
BstXI CCANNNNNNTGG 2 cut(s) 100, 1172
BstYI RGATCY 2 cut(s) 734, 1192
BsuI GTATCC 1 cut(s) 967
BsuRI GGCC 2 cut(s) 1357, 1363
BtgI CCRYGG 2 cut(s) 563, 1358
BtsCI GGATG 2 cut(s) 257, 343
BtsIMutI CAGTG 1 cut(s) 450
BveI ACCTGC 5 cut(s) 1056, 1360, 1599, 1613, 1622
Cac8I GCNNGC 2 cut(s) 1207, 1425
CaiI CAGNNNCTG 2 cut(s) 614, 763
CfoI GCGC 1 cut(s) 1216
Cfr10I RCCGGY 1 cut(s) 913
Cfr13I GGNCC 1 cut(s) 130
Cfr42I CCGCGG 1 cut(s) 566
Csp6I GTAC 3 cut(s) 316, 462, 769
CviQI GTAC 3 cut(s) 316, 462, 769
DdeI CTNAG 9 cut(s) 107, 155, 213, 432, 615, 726, 1030, 1238, 1365
DpnI GATC 5 cut(s) 736, 1194, 1314, 1485, 1525
DpnII GATC 5 cut(s) 734, 1192, 1312, 1483, 1523
Eam1104I CTCTTC 3 cut(s) 120, 783, 1461
EarI CTCTTC 3 cut(s) 120, 783, 1461
EciI GGCGGA 1 cut(s) 1431
Ecl136II GAGCTC 2 cut(s) 113, 679
Eco130I CCWWGG 2 cut(s) 133, 1358
Eco24I GRGCYC 2 cut(s) 115, 681
Eco47I GGWCC 1 cut(s) 130
Eco53kI GAGCTC 2 cut(s) 113, 679
Eco57I CTGAAG 2 cut(s) 773, 815
EcoICRI GAGCTC 2 cut(s) 113, 679
EcoRI GAATTC 2 cut(s) 1078, 1295
EcoRII CCWGG 2 cut(s) 874, 1561
EcoT14I CCWWGG 2 cut(s) 133, 1358
EcoT22I ATGCAT 2 cut(s) 508, 1406
EcoT38I GRGCYC 2 cut(s) 115, 681
ErhI CCWWGG 2 cut(s) 133, 1358
FalI AAGNNNNNCTT 2 cut(s) 954, 986
FaqI GGGAC 1 cut(s) 323
FbaI TGATCA 1 cut(s) 1312
Fnu4HI GCNGC 4 cut(s) 84, 123, 142, 1445
FokI GGATG 2 cut(s) 244, 350
FriOI GRGCYC 2 cut(s) 115, 681
Fsp4HI GCNGC 4 cut(s) 84, 123, 142, 1445
FspBI CTAG 4 cut(s) 237, 323, 1190, 1353
GlaI GCGC 1 cut(s) 1215
GluI GCNGC 4 cut(s) 84, 123, 142, 1445
GsaI CCCAGC 3 cut(s) 182, 431, 1451
GsuI CTGGAG 1 cut(s) 785
HaeIII GGCC 2 cut(s) 1357, 1363
HapII CCGG 3 cut(s) 261, 604, 914
HhaI GCGC 1 cut(s) 1216
Hin6I GCGC 1 cut(s) 1214
HinP1I GCGC 1 cut(s) 1214
HindIII AAGCTT 1 cut(s) 1184
HinfI GANTC 6 cut(s) 341, 413, 497, 611, 648, 704
HpaII CCGG 3 cut(s) 261, 604, 914
HphI GGTGA 3 cut(s) 466, 483, 1170
Hpy166II GTNNAC 1 cut(s) 1036
Hpy188I TCNGA 7 cut(s) 279, 301, 397, 616, 727, 961, 1317
Hpy188III TCNNGA 5 cut(s) 215, 378, 1165, 1190, 1577
Hpy8I GTNNAC 1 cut(s) 1036
HpyAV CCTTC 5 cut(s) 174, 320, 402, 793, 932
HpyCH4III ACNGT 6 cut(s) 478, 522, 785, 1071, 1157, 1289
HpyCH4IV ACGT 1 cut(s) 293
HpyCH4V TGCA 8 cut(s) 149, 506, 949, 990, 1329, 1404, 1608, 1622
HpyF10VI GCNNNNNNNGC 7 cut(s) 89, 119, 179, 748, 821, 1211, 1628
HpyF3I CTNAG 9 cut(s) 107, 155, 213, 432, 615, 726, 1030, 1238, 1365
HpySE526I ACGT 1 cut(s) 293
HspAI GCGC 1 cut(s) 1214
Ksp22I TGATCA 1 cut(s) 1312
KspI CCGCGG 1 cut(s) 566
Kzo9I GATC 5 cut(s) 734, 1192, 1312, 1483, 1523
LguI GCTCTTC 2 cut(s) 120, 783
LmnI GCTCC 3 cut(s) 103, 748, 1476
Lsp1109I GCAGC 3 cut(s) 95, 109, 153
LweI GCATC 2 cut(s) 515, 1338
MaeI CTAG 4 cut(s) 237, 323, 1190, 1353
MaeII ACGT 1 cut(s) 293
MaeIII GTNAC 4 cut(s) 448, 522, 1131, 1410
MalI GATC 5 cut(s) 736, 1194, 1314, 1485, 1525
MboI GATC 5 cut(s) 734, 1192, 1312, 1483, 1523
MfeI CAATTG 1 cut(s) 657
MflI RGATCY 2 cut(s) 734, 1192
MhlI GDGCHC 2 cut(s) 115, 681
MlyI GAGTC 1 cut(s) 698
MmeI TCCRAC 3 cut(s) 429, 623, 1081
MnlI CCTC 8 cut(s) 208, 427, 610, 712, 916, 1206, 1285, 1452
Mph1103I ATGCAT 2 cut(s) 508, 1406
MseI TTAA 7 cut(s) 63, 569, 713, 908, 1247, 1545, 1589
MslI CAYNNNNRTG 3 cut(s) 476, 1031, 1508
MspA1I CMGCKG 3 cut(s) 431, 565, 1447
MspCI CTTAAG 2 cut(s) 1246, 1588
MspI CCGG 3 cut(s) 261, 604, 914
MspR9I CCNGG 4 cut(s) 262, 604, 876, 1563
MunI CAATTG 1 cut(s) 657
Mva1269I GAATGC 2 cut(s) 901, 1382
MvaI CCWGG 2 cut(s) 876, 1563
MvnI CGCG 1 cut(s) 565
MwoI GCNNNNNNNGC 7 cut(s) 89, 119, 179, 748, 821, 1211, 1628
NciI CCSGG 2 cut(s) 262, 604
NcoI CCATGG 1 cut(s) 1358
NdeII GATC 5 cut(s) 734, 1192, 1312, 1483, 1523
NlaIV GGNNCC 1 cut(s) 161
NmuCI GTSAC 3 cut(s) 448, 522, 1131
NsiI ATGCAT 2 cut(s) 508, 1406
NspI RCATGY 2 cut(s) 824, 1507
NspV TTCGAA 1 cut(s) 1091
OliI CACNNNNGTG 1 cut(s) 1031
PciI ACATGT 1 cut(s) 1503
PciSI GCTCTTC 2 cut(s) 120, 783
PctI GAATGC 2 cut(s) 901, 1382
PfeI GAWTC 5 cut(s) 341, 413, 497, 611, 648
PkrI GCNGC 4 cut(s) 85, 124, 143, 1446
PleI GAGTC 1 cut(s) 698
PpsI GAGTC 1 cut(s) 698
PscI ACATGT 1 cut(s) 1503
Psp124BI GAGCTC 2 cut(s) 115, 681
Psp1406I AACGTT 1 cut(s) 293
Psp6I CCWGG 2 cut(s) 874, 1561
PspFI CCCAGC 3 cut(s) 178, 427, 1447
PspGI CCWGG 2 cut(s) 874, 1561
PspN4I GGNNCC 1 cut(s) 161
PspPI GGNCC 1 cut(s) 130
PstI CTGCAG 2 cut(s) 951, 1624
PstNI CAGNNNCTG 2 cut(s) 614, 763
PsuI RGATCY 2 cut(s) 734, 1192
PvuII CAGCTG 1 cut(s) 431
RsaI GTAC 3 cut(s) 317, 463, 770
RsaNI GTAC 3 cut(s) 316, 462, 769
RseI CAYNNNNRTG 3 cut(s) 476, 1031, 1508
SacI GAGCTC 2 cut(s) 115, 681
SacII CCGCGG 1 cut(s) 566
SapI GCTCTTC 2 cut(s) 120, 783
SaqAI TTAA 7 cut(s) 63, 569, 713, 908, 1247, 1545, 1589
SatI GCNGC 4 cut(s) 84, 123, 142, 1445
Sau3AI GATC 5 cut(s) 734, 1192, 1312, 1483, 1523
Sau96I GGNCC 1 cut(s) 130
ScaI AGTACT 1 cut(s) 770
SchI GAGTC 1 cut(s) 698
ScrFI CCNGG 4 cut(s) 262, 604, 876, 1563
SduI GDGCHC 2 cut(s) 115, 681
SfaNI GCATC 2 cut(s) 515, 1338
SfcI CTRYAG 2 cut(s) 947, 1620
Sfr303I CCGCGG 1 cut(s) 566
SfuI TTCGAA 1 cut(s) 1091
SgrBI CCGCGG 1 cut(s) 566
SinI GGWCC 1 cut(s) 130
SmiMI CAYNNNNRTG 3 cut(s) 476, 1031, 1508
SmlI CTYRAG 3 cut(s) 627, 1246, 1588
SmoI CTYRAG 3 cut(s) 627, 1246, 1588
SsiI CCGC 5 cut(s) 563, 565, 899, 1442, 1445
SspI AATATT 1 cut(s) 853
SspMI CTAG 4 cut(s) 237, 323, 1190, 1353
SstI GAGCTC 2 cut(s) 115, 681
StyD4I CCNGG 4 cut(s) 260, 602, 874, 1561
StyI CCWWGG 2 cut(s) 133, 1358
TaaI ACNGT 6 cut(s) 478, 522, 785, 1071, 1157, 1289
TaiI ACGT 1 cut(s) 296
TaqI TCGA 1 cut(s) 1091
TatI WGTACW 2 cut(s) 461, 768
TauI GCSGC 1 cut(s) 1447
TfiI GAWTC 5 cut(s) 341, 413, 497, 611, 648
Tru1I TTAA 7 cut(s) 63, 569, 713, 908, 1247, 1545, 1589
Tru9I TTAA 7 cut(s) 63, 569, 713, 908, 1247, 1545, 1589
TscAI CASTG 1 cut(s) 457
TseFI GTSAC 3 cut(s) 448, 522, 1131
TseI GCWGC 3 cut(s) 83, 122, 141
Tsp45I GTSAC 3 cut(s) 448, 522, 1131
TspDTI ATGAA 8 cut(s) 107, 258, 296, 354, 1215, 1272, 1406, 1422
TspRI CASTG 1 cut(s) 457
Vha464I CTTAAG 2 cut(s) 1246, 1588
VpaK11BI GGWCC 1 cut(s) 130
XapI RAATTY 6 cut(s) 18, 273, 832, 859, 1078, 1295
XbaI TCTAGA 1 cut(s) 1189
XceI RCATGY 2 cut(s) 824, 1507
XspI CTAG 4 cut(s) 237, 323, 1190, 1353
ZrmI AGTACT 1 cut(s) 770
Zsp2I ATGCAT 2 cut(s) 508, 1406
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.