RLG00000020068

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
60723726 .. 60725628
1903 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020068

Sequence Viewer

Length: 1005 bp
ATGGAGTTGTCTATGAAGGTGATGCTCGGCCTTCAGCGGGAGTTATTGAGCTCACCACAGGCACTTATTTCGGTGTTGGACGTGCTACGTATGAAGCGTCTTTGCACGTACCTATGGGACACTGCTACTGGGTCACTGGCGGACTTCACTTCTCATTTCCCTTTCGTGGTCGACTTTGCTTCTCCTCCTGATGGGTCCTTCAGCGATGGAATTGCCTTTTTCCTTGCTCCTGTTGGCCACCATATTCCACCCAACTCTGGCGGTGGTGGGCTGGGATTATTCAACTCCACCACCAACTTAAATAATTCATTGGGTGGTATCATTAGCAAGGCGAATGCATACTTGTTTATGCATATATGCATAGCTAACACCACCCTTGACACCCATCTATTTGGCACCAGAACAACCCTACAATGGGATAACAGCACTAAGCTTGGTGATTTTGGTATCGCTAAGCTCGTGGATCCCCGGTTGAGGTCTCAGACAAGAGGGGTGGTAGGGACTTTTGGATACATGGCCCCGGAATATGCTACTGAAGGGAAAGCTAGTCAGGAATCTGACATGTTTAGCTTTGGAGTTGTAGCCTTGGAAATTGCTTGTGGAAGGAAGACTTTCCAAGACAATGAATATCACGTGCCACTTTTTAGGTGGGTTTGGCAATTGTTCCTTGCAGGAAATATTCTGGACGCAGCTGATGAAAGATTAGAAATGAATTATGATCGAAATGAAATGAAATGCTTGTTGATTGTTGGACTATGGTGTACTCACGCCAACAACAAGGAACGACCCAAAGCAGGACAGGTGATGAAGGTTATTCAGCTTGAAGCACCATTGCCGGAACTTCCACGTGACATGCGTAATCATCCAGAACTGCCTCAACCACAATACCAATCTCAAGTTGCATCTTCTCAGATATCCTCAACTTCTTCTAGCTTGGTACCTGAAAGAGTCGCTAAATCATTTGAAGGGCTAGGTGAAAGAGGTGGAACCAGTTCATCAGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

335

Amino Acids

36.7

Weight (kDa)

5.92

Isoelectric Point (pI)

50.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 37 - 101 4.1e-11 Legume lectin domain
Pkinase PF00069 140 - 270 2.7e-14 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 140 - 269 1.2e-10 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 937
AccB1I GGYRCC 2 cut(s) 395, 937
AccI GTMKAC 1 cut(s) 171
AciI CCGC 3 cut(s) 37, 140, 261
AclWI GGATC 2 cut(s) 458, 471
AcoI YGGCCR 1 cut(s) 235
AcuI CTGAAG 3 cut(s) 17, 184, 555
AcvI CACGTG 2 cut(s) 634, 848
AfaI GTAC 3 cut(s) 110, 763, 939
AfiI CCNNNNNNNGG 8 cut(s) 37, 166, 191, 257, 414, 415, 474, 794
AflIII ACRYGT 1 cut(s) 561
AgsI TTSAA 3 cut(s) 283, 824, 965
AjiI CACGTC 1 cut(s) 82
AluBI AGCT 9 cut(s) 51, 365, 433, 457, 545, 570, 692, 820, 933
AluI AGCT 9 cut(s) 51, 365, 433, 457, 545, 570, 692, 820, 933
Alw21I GWGCWC 1 cut(s) 53
Alw26I GTCTC 1 cut(s) 483
AlwI GGATC 2 cut(s) 458, 471
AoxI GGCC 3 cut(s) 28, 235, 516
ApeKI GCWGC 1 cut(s) 689
Asp700I GAANNNNTTC 2 cut(s) 611, 991
Asp718I GGTACC 1 cut(s) 937
AspS9I GGNCC 2 cut(s) 195, 517
AsuC2I CCSGG 2 cut(s) 469, 521
AsuHPI GGTGA 5 cut(s) 31, 45, 449, 814, 986
AvaII GGWCC 1 cut(s) 195
BalI TGGCCA 1 cut(s) 237
BamHI GGATCC 1 cut(s) 463
BanI GGYRCC 2 cut(s) 395, 937
BanII GRGCYC 1 cut(s) 53
BauI CACGAG 1 cut(s) 458
BbrPI CACGTG 2 cut(s) 634, 848
BbsI GAAGAC 1 cut(s) 614
Bbv12I GWGCWC 1 cut(s) 53
BbvI GCAGC 1 cut(s) 701
BccI CCATC 3 cut(s) 185, 200, 393
BcgI CGANNNNNNTGC 4 cut(s) 51, 85, 194, 228
BciVI GTATCC 1 cut(s) 503
BcnI CCSGG 2 cut(s) 469, 521
BcoDI GTCTC 1 cut(s) 483
BfaI CTAG 3 cut(s) 546, 930, 971
BfuI GTATCC 1 cut(s) 503
BisI GCNGC 1 cut(s) 690
BlpI GCTNAGC 1 cut(s) 453
BlsI GCNGC 1 cut(s) 691
Bme1390I CCNGG 2 cut(s) 469, 521
Bme18I GGWCC 1 cut(s) 195
BmgBI CACGTC 1 cut(s) 82
BmgT120I GGNCC 2 cut(s) 195, 517
BmiI GGNNCC 6 cut(s) 196, 397, 465, 519, 939, 988
BmrFI CCNGG 2 cut(s) 469, 521
BmrI ACTGGG 1 cut(s) 138
BmsI GCATC 2 cut(s) 12, 911
BmuI ACTGGG 1 cut(s) 138
BpiI GAAGAC 1 cut(s) 614
Bpu1102I GCTNAGC 1 cut(s) 453
BpuEI CTTGAG 1 cut(s) 879
BpuMI CCSGG 2 cut(s) 469, 521
BsaAI YACGTR 4 cut(s) 89, 108, 634, 848
BsaI GGTCTC 1 cut(s) 483
BsaJI CCNNGG 3 cut(s) 467, 519, 585
Bsc4I CCNNNNNNNGG 8 cut(s) 37, 166, 191, 257, 414, 415, 474, 794
Bse1I ACTGG 3 cut(s) 133, 141, 990
Bse3DI GCAATG 1 cut(s) 830
BseDI CCNNGG 3 cut(s) 467, 519, 585
BseGI GGATG 1 cut(s) 862
BseLI CCNNNNNNNGG 8 cut(s) 37, 166, 191, 257, 414, 415, 474, 794
BseMI GCAATG 1 cut(s) 830
BseMII CTCAG 2 cut(s) 494, 923
BseNI ACTGG 3 cut(s) 133, 141, 990
BseRI GAGGAG 1 cut(s) 174
BseXI GCAGC 1 cut(s) 701
BseYI CCCAGC 1 cut(s) 271
BshFI GGCC 3 cut(s) 30, 237, 518
BshNI GGYRCC 2 cut(s) 395, 937
BsiHKAI GWGCWC 1 cut(s) 53
BsiSI CCGG 3 cut(s) 469, 521, 836
BslFI GGGAC 2 cut(s) 131, 514
BslI CCNNNNNNNGG 8 cut(s) 37, 166, 191, 257, 414, 415, 474, 794
BsmAI GTCTC 1 cut(s) 483
BsmFI GGGAC 2 cut(s) 131, 514
BsmI GAATGC 1 cut(s) 340
BsnI GGCC 3 cut(s) 30, 237, 518
Bso31I GGTCTC 1 cut(s) 483
Bsp1286I GDGCHC 1 cut(s) 53
Bsp143I GATC 2 cut(s) 463, 718
Bsp1720I GCTNAGC 1 cut(s) 453
BspACI CCGC 3 cut(s) 37, 140, 261
BspANI GGCC 3 cut(s) 30, 237, 518
BspCNI CTCAG 2 cut(s) 493, 922
BspLI GGNNCC 6 cut(s) 196, 397, 465, 519, 939, 988
BspPI GGATC 2 cut(s) 458, 471
BspT107I GGYRCC 2 cut(s) 395, 937
BspTNI GGTCTC 1 cut(s) 483
BsrDI GCAATG 1 cut(s) 830
BsrI ACTGG 3 cut(s) 133, 141, 990
BssECI CCNNGG 3 cut(s) 467, 519, 585
BssMI GATC 2 cut(s) 463, 718
BssSI CACGAG 1 cut(s) 458
BssT1I CCWWGG 1 cut(s) 585
Bst2BI CACGAG 1 cut(s) 458
BstBAI YACGTR 4 cut(s) 89, 108, 634, 848
BstDEI CTNAG 4 cut(s) 429, 453, 480, 909
BstF5I GGATG 1 cut(s) 862
BstKTI GATC 2 cut(s) 466, 721
BstMAI GTCTC 1 cut(s) 483
BstMBI GATC 2 cut(s) 463, 718
BstNSI RCATGY 2 cut(s) 565, 856
BstSCI CCNGG 2 cut(s) 467, 519
BstSNI TACGTA 1 cut(s) 89
BstV1I GCAGC 1 cut(s) 701
BstV2I GAAGAC 1 cut(s) 614
BstX2I RGATCY 1 cut(s) 463
BstXI CCANNNNNNTGG 1 cut(s) 392
BstYI RGATCY 1 cut(s) 463
BsuI GTATCC 1 cut(s) 503
BsuRI GGCC 3 cut(s) 30, 237, 518
BtgZI GCGATG 1 cut(s) 219
BtrI CACGTC 1 cut(s) 82
BtsCI GGATG 1 cut(s) 862
BtsI GCAGTG 1 cut(s) 120
BtsIMutI CAGTG 2 cut(s) 120, 134
Cfr13I GGNCC 2 cut(s) 195, 517
CseI GACGC 2 cut(s) 86, 695
Csp6I GTAC 3 cut(s) 109, 762, 938
CspCI CAANNNNNGTGG 2 cut(s) 474, 509
CviAII CATG 3 cut(s) 514, 562, 853
CviQI GTAC 3 cut(s) 109, 762, 938
DdeI CTNAG 4 cut(s) 429, 453, 480, 909
DpnI GATC 2 cut(s) 465, 720
DpnII GATC 2 cut(s) 463, 718
EaeI YGGCCR 1 cut(s) 235
EciI GGCGGA 1 cut(s) 155
Ecl136II GAGCTC 1 cut(s) 51
Eco105I TACGTA 1 cut(s) 89
Eco130I CCWWGG 1 cut(s) 585
Eco24I GRGCYC 1 cut(s) 53
Eco31I GGTCTC 1 cut(s) 483
Eco32I GATATC 1 cut(s) 915
Eco47I GGWCC 1 cut(s) 195
Eco53kI GAGCTC 1 cut(s) 51
Eco57I CTGAAG 3 cut(s) 17, 184, 555
Eco72I CACGTG 2 cut(s) 634, 848
EcoICRI GAGCTC 1 cut(s) 51
EcoO109I RGGNCCY 1 cut(s) 195
EcoRV GATATC 1 cut(s) 915
EcoT14I CCWWGG 1 cut(s) 585
EcoT22I ATGCAT 3 cut(s) 340, 354, 362
EcoT38I GRGCYC 1 cut(s) 53
ErhI CCWWGG 1 cut(s) 585
FaeI CATG 3 cut(s) 517, 565, 856
FalI AAGNNNNNCTT 2 cut(s) 595, 627
FaqI GGGAC 2 cut(s) 131, 514
FatI CATG 3 cut(s) 513, 561, 852
FauI CCCGC 1 cut(s) 30
FblI GTMKAC 1 cut(s) 171
Fnu4HI GCNGC 1 cut(s) 690
FokI GGATG 1 cut(s) 849
FriOI GRGCYC 1 cut(s) 53
Fsp4HI GCNGC 1 cut(s) 690
FspBI CTAG 3 cut(s) 546, 930, 971
GluI GCNGC 1 cut(s) 690
GsaI CCCAGC 1 cut(s) 275
HaeIII GGCC 3 cut(s) 30, 237, 518
HapII CCGG 3 cut(s) 469, 521, 836
HgaI GACGC 2 cut(s) 86, 695
Hin1II CATG 3 cut(s) 517, 565, 856
HincII GTYRAC 1 cut(s) 172
HindII GTYRAC 1 cut(s) 172
HindIII AAGCTT 1 cut(s) 431
HinfI GANTC 2 cut(s) 554, 948
HpaII CCGG 3 cut(s) 469, 521, 836
HphI GGTGA 5 cut(s) 31, 45, 449, 814, 986
Hpy166II GTNNAC 2 cut(s) 172, 762
Hpy188I TCNGA 3 cut(s) 483, 559, 912
Hpy188III TCNNGA 5 cut(s) 188, 551, 683, 866, 999
Hpy8I GTNNAC 2 cut(s) 172, 762
HpyAV CCTTC 7 cut(s) 10, 41, 208, 530, 597, 802, 959
HpyCH4IV ACGT 5 cut(s) 81, 88, 107, 633, 847
HpyCH4V TGCA 6 cut(s) 105, 338, 352, 360, 671, 902
HpyF3I CTNAG 4 cut(s) 429, 453, 480, 909
HpySE526I ACGT 5 cut(s) 81, 88, 107, 633, 847
Hsp92II CATG 3 cut(s) 517, 565, 856
KpnI GGTACC 1 cut(s) 941
Kzo9I GATC 2 cut(s) 463, 718
LmnI GCTCC 1 cut(s) 232
Lsp1109I GCAGC 1 cut(s) 701
LweI GCATC 2 cut(s) 12, 911
MaeI CTAG 3 cut(s) 546, 930, 971
MaeII ACGT 5 cut(s) 81, 88, 107, 633, 847
MaeIII GTNAC 2 cut(s) 132, 848
MalI GATC 2 cut(s) 465, 720
MboI GATC 2 cut(s) 463, 718
MboII GAAGA 3 cut(s) 619, 897, 918
MfeI CAATTG 1 cut(s) 659
MflI RGATCY 1 cut(s) 463
MhlI GDGCHC 1 cut(s) 53
MlsI TGGCCA 1 cut(s) 237
MluCI AATT 5 cut(s) 210, 304, 591, 659, 712
MluNI TGGCCA 1 cut(s) 237
MlyI GAGTC 1 cut(s) 957
MmeI TCCRAC 2 cut(s) 57, 730
MnlI CCTC 6 cut(s) 195, 468, 482, 885, 928, 974
Mox20I TGGCCA 1 cut(s) 237
Mph1103I ATGCAT 3 cut(s) 340, 354, 362
MroXI GAANNNNTTC 2 cut(s) 611, 991
MscI TGGCCA 1 cut(s) 237
MseI TTAA 1 cut(s) 299
Msp20I TGGCCA 1 cut(s) 237
MspA1I CMGCKG 2 cut(s) 37, 692
MspI CCGG 3 cut(s) 469, 521, 836
MspR9I CCNGG 2 cut(s) 469, 521
MunI CAATTG 1 cut(s) 659
Mva1269I GAATGC 1 cut(s) 340
NciI CCSGG 2 cut(s) 469, 521
NdeII GATC 2 cut(s) 463, 718
NlaIII CATG 3 cut(s) 517, 565, 856
NlaIV GGNNCC 6 cut(s) 196, 397, 465, 519, 939, 988
NmeAIII GCCGAG 1 cut(s) 6
NmuCI GTSAC 2 cut(s) 132, 848
NsiI ATGCAT 3 cut(s) 340, 354, 362
NspI RCATGY 2 cut(s) 565, 856
PciI ACATGT 1 cut(s) 561
PcsI WCGNNNNNNNCGW 3 cut(s) 94, 456, 853
PctI GAATGC 1 cut(s) 340
PdmI GAANNNNTTC 2 cut(s) 611, 991
PfeI GAWTC 1 cut(s) 554
PkrI GCNGC 1 cut(s) 691
PleI GAGTC 1 cut(s) 956
PmaCI CACGTG 2 cut(s) 634, 848
PmlI CACGTG 2 cut(s) 634, 848
PpsI GAGTC 1 cut(s) 956
Ppu21I YACGTR 4 cut(s) 89, 108, 634, 848
PpuMI RGGWCCY 1 cut(s) 195
PscI ACATGT 1 cut(s) 561
Psp124BI GAGCTC 1 cut(s) 53
Psp5II RGGWCCY 1 cut(s) 195
PspCI CACGTG 2 cut(s) 634, 848
PspFI CCCAGC 1 cut(s) 271
PspN4I GGNNCC 6 cut(s) 196, 397, 465, 519, 939, 988
PspPI GGNCC 2 cut(s) 195, 517
PspPPI RGGWCCY 1 cut(s) 195
PsuI RGATCY 1 cut(s) 463
PvuII CAGCTG 1 cut(s) 692
RsaI GTAC 3 cut(s) 110, 763, 939
RsaNI GTAC 3 cut(s) 109, 762, 938
SacI GAGCTC 1 cut(s) 53
SalI GTCGAC 1 cut(s) 170
SaqAI TTAA 1 cut(s) 299
SatI GCNGC 1 cut(s) 690
Sau3AI GATC 2 cut(s) 463, 718
Sau96I GGNCC 2 cut(s) 195, 517
SchI GAGTC 1 cut(s) 957
ScrFI CCNGG 2 cut(s) 469, 521
SduI GDGCHC 1 cut(s) 53
SfaNI GCATC 2 cut(s) 12, 911
SinI GGWCC 1 cut(s) 195
SmlI CTYRAG 1 cut(s) 894
SmoI CTYRAG 1 cut(s) 894
SnaBI TACGTA 1 cut(s) 89
Sse9I AATT 5 cut(s) 210, 304, 591, 659, 712
SsiI CCGC 3 cut(s) 37, 140, 261
SspI AATATT 1 cut(s) 679
SspMI CTAG 3 cut(s) 546, 930, 971
SstI GAGCTC 1 cut(s) 53
StyD4I CCNGG 2 cut(s) 467, 519
StyI CCWWGG 1 cut(s) 585
TaiI ACGT 5 cut(s) 84, 91, 110, 636, 850
TaqI TCGA 2 cut(s) 171, 721
TasI AATT 5 cut(s) 210, 304, 591, 659, 712
TatI WGTACW 1 cut(s) 761
TfiI GAWTC 1 cut(s) 554
Tru1I TTAA 1 cut(s) 299
Tru9I TTAA 1 cut(s) 299
TscAI CASTG 2 cut(s) 127, 141
TseFI GTSAC 2 cut(s) 132, 848
TseI GCWGC 1 cut(s) 689
Tsp45I GTSAC 2 cut(s) 132, 848
TspRI CASTG 2 cut(s) 127, 141
VpaK11BI GGWCC 1 cut(s) 195
XceI RCATGY 2 cut(s) 565, 856
XcmI CCANNNNNNNNNTGG 1 cut(s) 645
XmiI GTMKAC 1 cut(s) 171
XmnI GAANNNNTTC 2 cut(s) 611, 991
XspI CTAG 3 cut(s) 546, 930, 971
Zsp2I ATGCAT 3 cut(s) 340, 354, 362
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.