Rroxscaffold_4G00298840

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
18702257 .. 18703509
1253 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00298840.1

Sequence Viewer

Length: 1131 bp
ATGGAGTCATGGACCTCATGTTGGGATCAATACAATGCTAGTTGGGATTATAGTGCCGTGCGATCGAGGAAGGTGGCAAATGCACAAATAGCTTACAATGCTACCACAAACATGCTCAGTGTGCTTTGGAGATACCAAGAAGACTCGAAGCCTGTTTCTGGTGGGAGTACTAATTCTCTTTCTTTCCAAATTAACTTACGAGATGTTCTCCCCGAACTGCAACAATGGAGAAAAAGGAAGCATGCACTCTTCGTAGAGGTGGTCAGTGCAATTTCTTTCTTCATTTTGATGCTCGGTGCGGCCTTGTGTATAGTGGTGGTACAGAAGCAGAGAGCCATCAAAGGACATGGAAATGTTTACTCCACTGCCGCGGTGTCCTCTATAACTAAGAAACTCGAGAGACTAGCCTTTCCACGACGGTTTGCTTACCAAGAATTTGTTGTAGCCACGATTGGATTTGCAAAAGATAGAAGGCTAGGCCAAGGAGGGTCAGCACAAGTTTATAAAGGAGTCCTACAAGATAGAGGTTGCGCAATTGCTGTCAAGCGAATCTTTGCAGATCAATGTGAGCACCATGAGATCATTTTCCTCAATGAAGTGAAGATTTTAAGCCGCTTGATACATAAAAATCTGGTGCAGTTTATTGGATGGTGTCATGAGCAAGGTGAATGCTTACTTGTTTATGCGTACATGCCTAATAGTAGCCTTGATGCTCATCTATTTGGTTGTCAGGCAACACTGCAATGGGATTTAAGGTACAAGATAGCTTTAGGCTTGGCCTCAGCCCTGCATTATCTACATGAAGATGCGGAGCAGTGTGTCCTTCATAGGGATATTAAATCAGCAAACGTACAATTGGGCAACGATTTCAGCACTAAGCTTGGAGATTTCGGGATTGCTAAGTTCGTAGATCCTCACTTGAAGGCAAGGACAACGGTGGGGACCTTTGGGTACATGGCCCCCGATACGTTTTTCAAGGGAGGGCAAGCAAAGAATCAGACATGTTCAGTTTTGGAGTTGTTGCTTTGGAAAATGCCTGTGGGAGGCAGACTTATCACGACGGAGAATACCACATACCACTTTTTGAGTGGGTTTGGCGATTATACCTTGCAGGAAATCTTCTGGATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

376

Amino Acids

42.5

Weight (kDa)

8.94

Isoelectric Point (pI)

38.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 154 - 326 4.3e-35 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 156 - 326 2.1e-28 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 504
Acc16I TGCGCA 1 cut(s) 532
AccII CGCG 1 cut(s) 371
AciI CCGC 5 cut(s) 299, 369, 371, 613, 809
AclWI GGATC 2 cut(s) 33, 905
AcsI RAATTY 1 cut(s) 434
AfaI GTAC 6 cut(s) 169, 321, 689, 758, 852, 953
AfiI CCNNNNNNNGG 4 cut(s) 21, 158, 829, 1043
AflIII ACRYGT 1 cut(s) 1001
AgsI TTSAA 2 cut(s) 922, 976
AluBI AGCT 3 cut(s) 92, 767, 880
AluI AGCT 3 cut(s) 92, 767, 880
Alw21I GWGCWC 1 cut(s) 573
Alw26I GTCTC 1 cut(s) 394
AlwI GGATC 2 cut(s) 33, 905
Ama87I CYCGRG 1 cut(s) 395
AoxI GGCC 4 cut(s) 300, 478, 777, 957
ApoI RAATTY 1 cut(s) 434
AspLEI GCGC 1 cut(s) 533
AspS9I GGNCC 3 cut(s) 12, 942, 958
AsuHPI GGTGA 1 cut(s) 677
AvaI CYCGRG 1 cut(s) 395
AvaII GGWCC 2 cut(s) 12, 942
BbsI GAAGAC 1 cut(s) 147
Bbv12I GWGCWC 1 cut(s) 573
BbvCI CCTCAGC 1 cut(s) 781
BccI CCATC 2 cut(s) 344, 642
BceAI ACGGC 1 cut(s) 41
BcoDI GTCTC 1 cut(s) 394
BfaI CTAG 3 cut(s) 39, 404, 476
BisI GCNGC 3 cut(s) 300, 369, 613
BlsI GCNGC 3 cut(s) 301, 370, 614
BmcAI AGTACT 1 cut(s) 169
Bme18I GGWCC 2 cut(s) 12, 942
BmeT110I CYCGRG 1 cut(s) 395
BmgT120I GGNCC 3 cut(s) 12, 942, 958
BmiI GGNNCC 2 cut(s) 943, 960
BmsI GCATC 3 cut(s) 279, 700, 796
BpiI GAAGAC 1 cut(s) 147
BplI GAGNNNNNCTC 2 cut(s) 192, 224
Bpu10I CCTNAGC 1 cut(s) 781
BsaBI GATNNNNATC 1 cut(s) 714
BsaJI CCNNGG 2 cut(s) 369, 481
Bsc4I CCNNNNNNNGG 4 cut(s) 21, 158, 829, 1043
Bse3DI GCAATG 1 cut(s) 749
Bse8I GATNNNNATC 1 cut(s) 714
BseDI CCNNGG 2 cut(s) 369, 481
BseGI GGATG 2 cut(s) 653, 1131
BseJI GATNNNNATC 1 cut(s) 714
BseLI CCNNNNNNNGG 4 cut(s) 21, 158, 829, 1043
BseMI GCAATG 1 cut(s) 749
BseMII CTCAG 2 cut(s) 130, 795
BsgI GTGCAG 1 cut(s) 656
Bsh1236I CGCG 1 cut(s) 371
Bsh1285I CGRYCG 1 cut(s) 65
BshFI GGCC 4 cut(s) 302, 480, 779, 959
BsiEI CGRYCG 1 cut(s) 65
BsiHKAI GWGCWC 1 cut(s) 573
BsiHKCI CYCGRG 1 cut(s) 395
BslFI GGGAC 1 cut(s) 955
BslI CCNNNNNNNGG 4 cut(s) 21, 158, 829, 1043
BsmAI GTCTC 1 cut(s) 394
BsmFI GGGAC 1 cut(s) 955
BsmI GAATGC 1 cut(s) 674
BsnI GGCC 4 cut(s) 302, 480, 779, 959
BsoBI CYCGRG 1 cut(s) 395
Bsp1286I GDGCHC 1 cut(s) 573
Bsp143I GATC 5 cut(s) 25, 62, 559, 579, 910
BspACI CCGC 5 cut(s) 299, 369, 371, 613, 809
BspANI GGCC 4 cut(s) 302, 480, 779, 959
BspCNI CTCAG 2 cut(s) 129, 794
BspFNI CGCG 1 cut(s) 371
BspHI TCATGA 1 cut(s) 655
BspLI GGNNCC 2 cut(s) 943, 960
BspPI GGATC 2 cut(s) 33, 905
BsrDI GCAATG 1 cut(s) 749
BssECI CCNNGG 2 cut(s) 369, 481
BssMI GATC 5 cut(s) 25, 62, 559, 579, 910
BssT1I CCWWGG 1 cut(s) 481
Bst4CI ACNGT 2 cut(s) 420, 937
Bst6I CTCTTC 1 cut(s) 254
BstC8I GCNNGC 2 cut(s) 243, 987
BstDEI CTNAG 5 cut(s) 116, 387, 781, 876, 900
BstDSI CCRYGG 1 cut(s) 369
BstENI CCTNNNNNAGG 1 cut(s) 1041
BstF5I GGATG 2 cut(s) 653, 1131
BstFNI CGCG 1 cut(s) 371
BstHHI GCGC 1 cut(s) 533
BstKTI GATC 5 cut(s) 28, 65, 562, 582, 913
BstMAI GTCTC 1 cut(s) 394
BstMBI GATC 5 cut(s) 25, 62, 559, 579, 910
BstMCI CGRYCG 1 cut(s) 65
BstMWI GCNNNNNNNGC 3 cut(s) 89, 98, 121
BstNSI RCATGY 4 cut(s) 115, 245, 694, 1005
BstUI CGCG 1 cut(s) 371
BstV2I GAAGAC 1 cut(s) 147
BstX2I RGATCY 1 cut(s) 910
BstYI RGATCY 1 cut(s) 910
BsuRI GGCC 4 cut(s) 302, 480, 779, 959
BtgI CCRYGG 1 cut(s) 369
BtsCI GGATG 2 cut(s) 653, 1131
BtsI GCAGTG 3 cut(s) 363, 737, 821
BtsIMutI CAGTG 5 cut(s) 124, 271, 363, 737, 821
Cac8I GCNNGC 2 cut(s) 243, 987
CciI TCATGA 1 cut(s) 655
CfoI GCGC 1 cut(s) 533
Cfr13I GGNCC 3 cut(s) 12, 942, 958
Cfr42I CCGCGG 1 cut(s) 372
Csp6I GTAC 6 cut(s) 168, 320, 688, 757, 851, 952
CviQI GTAC 6 cut(s) 168, 320, 688, 757, 851, 952
DdeI CTNAG 5 cut(s) 116, 387, 781, 876, 900
DpnI GATC 5 cut(s) 27, 64, 561, 581, 912
DpnII GATC 5 cut(s) 25, 62, 559, 579, 910
Eam1104I CTCTTC 1 cut(s) 254
EarI CTCTTC 1 cut(s) 254
Eco130I CCWWGG 1 cut(s) 481
Eco47I GGWCC 2 cut(s) 12, 942
Eco88I CYCGRG 1 cut(s) 395
EcoNI CCTNNNNNAGG 1 cut(s) 1041
EcoO109I RGGNCCY 1 cut(s) 942
EcoT14I CCWWGG 1 cut(s) 481
ErhI CCWWGG 1 cut(s) 481
FalI AAGNNNNNCTT 2 cut(s) 536, 568
FaqI GGGAC 1 cut(s) 955
Fnu4HI GCNGC 3 cut(s) 300, 369, 613
FokI GGATG 1 cut(s) 660
Fsp4HI GCNGC 3 cut(s) 300, 369, 613
FspBI CTAG 3 cut(s) 39, 404, 476
FspI TGCGCA 1 cut(s) 532
GlaI GCGC 1 cut(s) 532
GluI GCNGC 3 cut(s) 300, 369, 613
HaeIII GGCC 4 cut(s) 302, 480, 779, 959
HhaI GCGC 1 cut(s) 533
Hin6I GCGC 1 cut(s) 531
HinP1I GCGC 1 cut(s) 531
HindIII AAGCTT 1 cut(s) 878
HinfI GANTC 5 cut(s) 5, 143, 510, 549, 994
HphI GGTGA 1 cut(s) 677
Hpy166II GTNNAC 1 cut(s) 358
Hpy188I TCNGA 1 cut(s) 999
Hpy188III TCNNGA 5 cut(s) 397, 656, 892, 1057, 1123
Hpy8I GTNNAC 1 cut(s) 358
Hpy99I CGWCG 2 cut(s) 420, 1063
HpyAV CCTTC 4 cut(s) 64, 465, 833, 916
HpyCH4III ACNGT 2 cut(s) 420, 937
HpyCH4IV ACGT 2 cut(s) 849, 968
HpyF10VI GCNNNNNNNGC 3 cut(s) 89, 98, 121
HpyF3I CTNAG 5 cut(s) 116, 387, 781, 876, 900
HpySE526I ACGT 2 cut(s) 849, 968
HspAI GCGC 1 cut(s) 531
KspI CCGCGG 1 cut(s) 372
Kzo9I GATC 5 cut(s) 25, 62, 559, 579, 910
LmnI GCTCC 1 cut(s) 811
LpnPI CCDG 8 cut(s) 144, 165, 617, 716, 800, 1050, 1097, 1108
LweI GCATC 3 cut(s) 279, 700, 796
MaeI CTAG 3 cut(s) 39, 404, 476
MaeII ACGT 2 cut(s) 849, 968
MalI GATC 5 cut(s) 27, 64, 561, 581, 912
MboI GATC 5 cut(s) 25, 62, 559, 579, 910
MboII GAAGA 6 cut(s) 152, 241, 271, 613, 815, 1111
MfeI CAATTG 2 cut(s) 534, 854
MflI RGATCY 1 cut(s) 910
MhlI GDGCHC 1 cut(s) 573
MluCI AATT 6 cut(s) 172, 189, 270, 434, 534, 854
MlyI GAGTC 3 cut(s) 14, 137, 519
MseI TTAA 4 cut(s) 192, 608, 752, 837
MslI CAYNNNNRTG 5 cut(s) 110, 287, 351, 742, 804
MspA1I CMGCKG 1 cut(s) 371
MunI CAATTG 2 cut(s) 534, 854
Mva1269I GAATGC 1 cut(s) 674
MvnI CGCG 1 cut(s) 371
MwoI GCNNNNNNNGC 3 cut(s) 89, 98, 121
NdeII GATC 5 cut(s) 25, 62, 559, 579, 910
NlaIV GGNNCC 2 cut(s) 943, 960
NsbI TGCGCA 1 cut(s) 532
NspI RCATGY 4 cut(s) 115, 245, 694, 1005
PaeI GCATGC 1 cut(s) 245
PaeR7I CTCGAG 1 cut(s) 395
PagI TCATGA 1 cut(s) 655
PciI ACATGT 1 cut(s) 1001
PctI GAATGC 1 cut(s) 674
PfeI GAWTC 2 cut(s) 549, 994
PkrI GCNGC 3 cut(s) 301, 370, 614
Ple19I CGATCG 1 cut(s) 65
PleI GAGTC 3 cut(s) 13, 137, 518
PpsI GAGTC 3 cut(s) 13, 137, 518
PpuMI RGGWCCY 1 cut(s) 942
PscI ACATGT 1 cut(s) 1001
PsiI TTATAA 1 cut(s) 504
Psp5II RGGWCCY 1 cut(s) 942
PspN4I GGNNCC 2 cut(s) 943, 960
PspPI GGNCC 3 cut(s) 12, 942, 958
PspPPI RGGWCCY 1 cut(s) 942
PsuI RGATCY 1 cut(s) 910
PvuI CGATCG 1 cut(s) 65
RsaI GTAC 6 cut(s) 169, 321, 689, 758, 852, 953
RsaNI GTAC 6 cut(s) 168, 320, 688, 757, 851, 952
RseI CAYNNNNRTG 5 cut(s) 110, 287, 351, 742, 804
SacII CCGCGG 1 cut(s) 372
SaqAI TTAA 4 cut(s) 192, 608, 752, 837
SatI GCNGC 3 cut(s) 300, 369, 613
Sau3AI GATC 5 cut(s) 25, 62, 559, 579, 910
Sau96I GGNCC 3 cut(s) 12, 942, 958
ScaI AGTACT 1 cut(s) 169
SchI GAGTC 3 cut(s) 14, 137, 519
SduI GDGCHC 1 cut(s) 573
SfaNI GCATC 3 cut(s) 279, 700, 796
Sfr274I CTCGAG 1 cut(s) 395
Sfr303I CCGCGG 1 cut(s) 372
SgrBI CCGCGG 1 cut(s) 372
SinI GGWCC 2 cut(s) 12, 942
SlaI CTCGAG 1 cut(s) 395
SmiMI CAYNNNNRTG 5 cut(s) 110, 287, 351, 742, 804
SmlI CTYRAG 1 cut(s) 395
SmoI CTYRAG 1 cut(s) 395
SphI GCATGC 1 cut(s) 245
Sse9I AATT 6 cut(s) 172, 189, 270, 434, 534, 854
SsiI CCGC 5 cut(s) 299, 369, 371, 613, 809
SspMI CTAG 3 cut(s) 39, 404, 476
StyI CCWWGG 1 cut(s) 481
TaaI ACNGT 2 cut(s) 420, 937
TaiI ACGT 2 cut(s) 852, 971
TaqI TCGA 3 cut(s) 65, 146, 396
TasI AATT 6 cut(s) 172, 189, 270, 434, 534, 854
TatI WGTACW 1 cut(s) 167
TauI GCSGC 3 cut(s) 302, 371, 615
TfiI GAWTC 2 cut(s) 549, 994
Tru1I TTAA 4 cut(s) 192, 608, 752, 837
Tru9I TTAA 4 cut(s) 192, 608, 752, 837
TscAI CASTG 5 cut(s) 124, 271, 370, 744, 821
TspDTI ATGAA 4 cut(s) 271, 609, 815, 816
TspGWI ACGGA 1 cut(s) 1076
TspRI CASTG 5 cut(s) 124, 271, 370, 744, 821
VpaK11BI GGWCC 2 cut(s) 12, 942
XagI CCTNNNNNAGG 1 cut(s) 1041
XapI RAATTY 1 cut(s) 434
XceI RCATGY 4 cut(s) 115, 245, 694, 1005
XcmI CCANNNNNNNNNTGG 1 cut(s) 1085
XhoI CTCGAG 1 cut(s) 395
XspI CTAG 3 cut(s) 39, 404, 476
ZrmI AGTACT 1 cut(s) 169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.