Rmu_sc0000316.1_g000004

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000316.1
Physical Location & Seq
Forward (+)
28979 .. 30934
1956 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000316.1_g000004.1.cds

Sequence Viewer

Length: 1956 bp
atgatgtctgaaagcagaagcagcagtacgcaagcaatctgcttctgcaatatttgcttcctaattattttcatcaatttcttctcccactttgctcacccactctccttcaatataaatcagttcgaccagagtgcaaatggagttgtctttgaaggtgatgcccagttttcatcgggaaggattgagctcaacccaggcacttatttcgatgttggacatgctatttatgcagagcctttgcacctatgggacactgctactggatcactggcagacttcactactcatttcactttcatggtcgactatggtgatgaagggtggaaattcagcgatggaattgcctttttccttgttcctgttggctacggtattccacccaactctggcggcggtgaactgggattattcaacaccaccaccaattttaatgcgaagattgtaaccgtagagttcgactcctggggaaacgaagactgggatccacatccactccggccccatattgggatcaacatcaatgaaatctcttcagttcaatacgccgattggaatcccagtaacatgaccgggaagattggtaatgcatggataacttataacgctactgccaacgaccttactgtgttttggacattcgagcaaaacacaaatcccgtttttccaggcaaatctacttcttccattacttgcaatgttgacttgcgaaaggttctccccgaaagggttacaattggtttttctgcttcggccggattatacctcgggcggcattttttatgttcatgggagtttaattcgactttgttggatagcgatattagtagagccgaaagcaagggaaagaagaaaaagatattcttgatactggacattgccctacctggcttcattttgatgcttggtgcagtcatatgttggttgatggtattatggaatcggagaaacaattactccggcgaagtctctgatcttgagaagctagcctttccaaaacgatttgcttaccaagaattgtttgttgccaccaacgggtttgcagacgatagaaggctaggccaaggagggtcggggcatgtatataaaggactcatacaagaccttggaggctgcatagttgccgtgaagagaatctttgcagaacctgatcagcattatgagagagtcttcatcaatgaagtcaaaatcataagccgcttaatccatcgaaacctagtgcagttcattgggtggtgtcatgagaaaggtgaatgcttacttgtttatgcatatatgcgtaacaacagccttgacacccacatatttggcaccagaacaaccctgcaatggcaaaacaggtacaagatagctttggggttggcctcagcaattcactatctacatgaagaagcagagcaatgtgttcttcatagggatatcaaatcagctaacgtactgttggatgaagacttcagcactaagcttggtgattttggtattgctaagctcgtggattcccgcttcaggtctcagacaagagaggtggcagggacttttggatacatggcccctgaatatgctattgatgggagggctagtaaggaatctgacatttttagttttggagttgtagccttggaaattgcttgcggaaggaagacttaccaagacggtgaatatcacttgccactctttaggtgggtttggcagttgttccttgcaggaaatattctagacgcagctgatgaaagattagaaatgaattatgatcgaaatgaaatgaaatgcttgttgattgttggactatggtgtactcaacccaataacaaggatagacccaaagcaggacaggtgatggaggttattcagcataaagcaccattgccggaacttccatatgacatgcataattatacagaactgcctcaacctcaataccaatttcagactgcatcttcttctagctatatatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

651

Amino Acids

73.64

Weight (kDa)

5.58

Isoelectric Point (pI)

42.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 603
AccB1I GGYRCC 1 cut(s) 1310
AccI GTMKAC 1 cut(s) 306
AciI CCGC 6 cut(s) 393, 396, 772, 1198, 1501, 1632
AclWI GGATC 4 cut(s) 274, 479, 492, 521
AcoI YGGCCR 1 cut(s) 753
AcsI RAATTY 1 cut(s) 329
AcuI CTGAAG 3 cut(s) 519, 1438, 1489
AfaI GTAC 4 cut(s) 28, 1343, 1437, 1795
AfiI CCNNNNNNNGG 8 cut(s) 389, 509, 510, 727, 1035, 1329, 1506, 1826
AgsI TTSAA 4 cut(s) 112, 155, 415, 542
AjnI CCWGG 4 cut(s) 196, 464, 667, 886
AluBI AGCT 8 cut(s) 190, 985, 1352, 1430, 1465, 1489, 1724, 1947
AluI AGCT 8 cut(s) 190, 985, 1352, 1430, 1465, 1489, 1724, 1947
Alw21I GWGCWC 1 cut(s) 192
Alw26I GTCTC 2 cut(s) 973, 1515
AlwI GGATC 4 cut(s) 274, 479, 492, 521
AlwNI CAGNNNCTG 1 cut(s) 1148
Ama87I CYCGRG 1 cut(s) 767
AoxI GGCC 5 cut(s) 500, 753, 1060, 1362, 1548
ApeKI GCWGC 3 cut(s) 21, 1113, 1721
ApoI RAATTY 1 cut(s) 329
AspS9I GGNCC 2 cut(s) 501, 1549
AsuC2I CCSGG 1 cut(s) 574
AsuHPI GGTGA 8 cut(s) 89, 170, 326, 410, 1262, 1481, 1667, 1846
AsuNHI GCTAGC 1 cut(s) 985
AvaI CYCGRG 1 cut(s) 767
BamHI GGATCC 1 cut(s) 484
BanI GGYRCC 1 cut(s) 1310
BanII GRGCYC 1 cut(s) 192
BarI GAAGNNNNNNTAC 2 cut(s) 10, 42
BauI CACGAG 1 cut(s) 1490
BbsI GAAGAC 4 cut(s) 483, 1162, 1455, 1646
Bbv12I GWGCWC 1 cut(s) 192
BbvCI CCTCAGC 1 cut(s) 1366
BbvI GCAGC 3 cut(s) 33, 1100, 1733
BccI CCATC 5 cut(s) 332, 922, 1215, 1562, 1831
BceAI ACGGC 1 cut(s) 1109
BcgI CGANNNNNNTGC 6 cut(s) 116, 150, 190, 224, 326, 360
BciT130I CCWGG 4 cut(s) 198, 466, 669, 888
BciVI GTATCC 1 cut(s) 1535
BclI TGATCA 1 cut(s) 1150
BcnI CCSGG 1 cut(s) 574
BcoDI GTCTC 2 cut(s) 973, 1515
BfaI CTAG 6 cut(s) 986, 1058, 1217, 1578, 1715, 1944
BfuI GTATCC 1 cut(s) 1535
BisI GCNGC 6 cut(s) 22, 394, 773, 1114, 1198, 1722
BlpI GCTNAGC 1 cut(s) 1485
BlsI GCNGC 6 cut(s) 23, 395, 774, 1115, 1199, 1723
Bme1390I CCNGG 5 cut(s) 198, 466, 574, 669, 888
BmeT110I CYCGRG 1 cut(s) 767
BmgT120I GGNCC 2 cut(s) 501, 1549
BmiI GGNNCC 4 cut(s) 486, 503, 1312, 1551
BmrFI CCNGG 5 cut(s) 198, 466, 574, 669, 888
BmrI ACTGGG 4 cut(s) 160, 413, 490, 555
BmsI GCATC 3 cut(s) 151, 891, 1943
BmtI GCTAGC 1 cut(s) 989
BmuI ACTGGG 4 cut(s) 160, 413, 490, 555
BpiI GAAGAC 4 cut(s) 483, 1162, 1455, 1646
BplI GAGNNNNNCTC 2 cut(s) 446, 478
Bpu10I CCTNAGC 1 cut(s) 1366
Bpu1102I GCTNAGC 1 cut(s) 1485
BpuEI CTTGAG 1 cut(s) 998
BpuMI CCSGG 1 cut(s) 574
BsaBI GATNNNNATC 3 cut(s) 489, 518, 555
BsaI GGTCTC 1 cut(s) 1515
BsaJI CCNNGG 6 cut(s) 196, 465, 766, 1063, 1105, 1617
BsaXI ACNNNNNCTCC 8 cut(s) 89, 119, 480, 510, 941, 971, 1564, 1594
Bsc4I CCNNNNNNNGG 8 cut(s) 389, 509, 510, 727, 1035, 1329, 1506, 1826
Bse1I ACTGG 7 cut(s) 166, 268, 276, 408, 485, 561, 876
Bse3DI GCAATG 5 cut(s) 703, 876, 1334, 1406, 1862
Bse8I GATNNNNATC 3 cut(s) 489, 518, 555
BseBI CCWGG 4 cut(s) 198, 466, 669, 888
BseDI CCNNGG 6 cut(s) 196, 465, 766, 1063, 1105, 1617
BseGI GGATG 2 cut(s) 490, 1450
BseJI GATNNNNATC 3 cut(s) 489, 518, 555
BseLI CCNNNNNNNGG 8 cut(s) 389, 509, 510, 727, 1035, 1329, 1506, 1826
BseMI GCAATG 5 cut(s) 703, 876, 1334, 1406, 1862
BseMII CTCAG 2 cut(s) 1380, 1526
BseNI ACTGG 7 cut(s) 166, 268, 276, 408, 485, 561, 876
BseX3I CGGCCG 1 cut(s) 753
BseXI GCAGC 3 cut(s) 33, 1100, 1733
BsgI GTGCAG 2 cut(s) 930, 1241
Bsh1285I CGRYCG 1 cut(s) 756
BshFI GGCC 5 cut(s) 502, 755, 1062, 1364, 1550
BshNI GGYRCC 1 cut(s) 1310
BsiEI CGRYCG 1 cut(s) 756
BsiHKAI GWGCWC 1 cut(s) 192
BsiHKCI CYCGRG 1 cut(s) 767
BsiSI CCGG 5 cut(s) 499, 573, 756, 960, 1868
BslFI GGGAC 2 cut(s) 266, 1546
BslI CCNNNNNNNGG 8 cut(s) 389, 509, 510, 727, 1035, 1329, 1506, 1826
BsmAI GTCTC 2 cut(s) 973, 1515
BsmFI GGGAC 2 cut(s) 266, 1546
BsmI GAATGC 1 cut(s) 1259
BsnI GGCC 5 cut(s) 502, 755, 1062, 1364, 1550
Bso31I GGTCTC 1 cut(s) 1515
BsoBI CYCGRG 1 cut(s) 767
Bsp1286I GDGCHC 1 cut(s) 192
Bsp143I GATC 6 cut(s) 266, 484, 513, 973, 1150, 1750
Bsp1720I GCTNAGC 1 cut(s) 1485
BspACI CCGC 6 cut(s) 393, 396, 772, 1198, 1501, 1632
BspANI GGCC 5 cut(s) 502, 755, 1062, 1364, 1550
BspCNI CTCAG 2 cut(s) 1379, 1525
BspHI TCATGA 1 cut(s) 1240
BspLI GGNNCC 4 cut(s) 486, 503, 1312, 1551
BspOI GCTAGC 1 cut(s) 989
BspPI GGATC 4 cut(s) 274, 479, 492, 521
BspT107I GGYRCC 1 cut(s) 1310
BspTNI GGTCTC 1 cut(s) 1515
BsrDI GCAATG 5 cut(s) 703, 876, 1334, 1406, 1862
BsrI ACTGG 7 cut(s) 166, 268, 276, 408, 485, 561, 876
BssECI CCNNGG 6 cut(s) 196, 465, 766, 1063, 1105, 1617
BssMI GATC 6 cut(s) 266, 484, 513, 973, 1150, 1750
BssSI CACGAG 1 cut(s) 1490
BssT1I CCWWGG 3 cut(s) 1063, 1105, 1617
Bst2BI CACGAG 1 cut(s) 1490
Bst2UI CCWGG 4 cut(s) 198, 466, 669, 888
Bst4CI ACNGT 5 cut(s) 374, 451, 628, 1440, 1655
Bst6I CTCTTC 2 cut(s) 538, 1124
BstAPI GCANNNNNTGC 1 cut(s) 54
BstC8I GCNNGC 3 cut(s) 33, 987, 1630
BstDEI CTNAG 4 cut(s) 1366, 1461, 1485, 1512
BstF5I GGATG 2 cut(s) 490, 1450
BstKTI GATC 6 cut(s) 269, 487, 516, 976, 1153, 1753
BstMAI GTCTC 2 cut(s) 973, 1515
BstMBI GATC 6 cut(s) 266, 484, 513, 973, 1150, 1750
BstMCI CGRYCG 1 cut(s) 756
BstMWI GCNNNNNNNGC 3 cut(s) 21, 54, 230
BstNI CCWGG 4 cut(s) 198, 466, 669, 888
BstNSI RCATGY 3 cut(s) 224, 1082, 1888
BstSCI CCNGG 5 cut(s) 196, 464, 572, 667, 886
BstV1I GCAGC 3 cut(s) 33, 1100, 1733
BstV2I GAAGAC 4 cut(s) 483, 1162, 1455, 1646
BstX2I RGATCY 1 cut(s) 484
BstXI CCANNNNNNTGG 1 cut(s) 1307
BstYI RGATCY 1 cut(s) 484
BstZI CGGCCG 1 cut(s) 753
BsuI GTATCC 1 cut(s) 1535
BsuRI GGCC 5 cut(s) 502, 755, 1062, 1364, 1550
BtgZI GCGATG 1 cut(s) 351
BtsCI GGATG 2 cut(s) 490, 1450
BtsI GCAGTG 1 cut(s) 255
BtsIMutI CAGTG 2 cut(s) 255, 269
Cac8I GCNNGC 3 cut(s) 33, 987, 1630
CaiI CAGNNNCTG 1 cut(s) 1148
CciI TCATGA 1 cut(s) 1240
Cfr13I GGNCC 2 cut(s) 501, 1549
CseI GACGC 1 cut(s) 1727
Csp6I GTAC 4 cut(s) 27, 1342, 1436, 1794
CspCI CAANNNNNGTGG 2 cut(s) 1506, 1541
CviQI GTAC 4 cut(s) 27, 1342, 1436, 1794
DdeI CTNAG 4 cut(s) 1366, 1461, 1485, 1512
DpnI GATC 6 cut(s) 268, 486, 515, 975, 1152, 1752
DpnII GATC 6 cut(s) 266, 484, 513, 973, 1150, 1750
EaeI YGGCCR 1 cut(s) 753
EagI CGGCCG 1 cut(s) 753
Eam1104I CTCTTC 2 cut(s) 538, 1124
EarI CTCTTC 2 cut(s) 538, 1124
Ecl136II GAGCTC 1 cut(s) 190
EclXI CGGCCG 1 cut(s) 753
Eco130I CCWWGG 3 cut(s) 1063, 1105, 1617
Eco24I GRGCYC 1 cut(s) 192
Eco31I GGTCTC 1 cut(s) 1515
Eco32I GATATC 1 cut(s) 1420
Eco52I CGGCCG 1 cut(s) 753
Eco53kI GAGCTC 1 cut(s) 190
Eco57I CTGAAG 3 cut(s) 519, 1438, 1489
Eco88I CYCGRG 1 cut(s) 767
EcoICRI GAGCTC 1 cut(s) 190
EcoRII CCWGG 4 cut(s) 196, 464, 667, 886
EcoRV GATATC 1 cut(s) 1420
EcoT14I CCWWGG 3 cut(s) 1063, 1105, 1617
EcoT22I ATGCAT 3 cut(s) 592, 1273, 1890
EcoT38I GRGCYC 1 cut(s) 192
ErhI CCWWGG 3 cut(s) 1063, 1105, 1617
FalI AAGNNNNNCTT 8 cut(s) 848, 880, 974, 1006, 1121, 1153, 1627, 1659
FaqI GGGAC 2 cut(s) 266, 1546
FauI CCCGC 1 cut(s) 1508
FauNDI CATATG 2 cut(s) 917, 1879
FbaI TGATCA 1 cut(s) 1150
FblI GTMKAC 1 cut(s) 306
Fnu4HI GCNGC 6 cut(s) 22, 394, 773, 1114, 1198, 1722
FokI GGATG 2 cut(s) 477, 1457
FriOI GRGCYC 1 cut(s) 192
Fsp4HI GCNGC 6 cut(s) 22, 394, 773, 1114, 1198, 1722
FspBI CTAG 6 cut(s) 986, 1058, 1217, 1578, 1715, 1944
GluI GCNGC 6 cut(s) 22, 394, 773, 1114, 1198, 1722
HaeIII GGCC 5 cut(s) 502, 755, 1062, 1364, 1550
HapII CCGG 5 cut(s) 499, 573, 756, 960, 1868
HgaI GACGC 1 cut(s) 1727
HincII GTYRAC 2 cut(s) 307, 703
HindII GTYRAC 2 cut(s) 307, 703
HindIII AAGCTT 1 cut(s) 1463
HinfI GANTC 8 cut(s) 461, 556, 940, 1092, 1134, 1167, 1496, 1586
HpaII CCGG 5 cut(s) 499, 573, 756, 960, 1868
HphI GGTGA 8 cut(s) 89, 170, 326, 410, 1262, 1481, 1667, 1846
Hpy166II GTNNAC 4 cut(s) 307, 401, 703, 1794
Hpy188I TCNGA 6 cut(s) 10, 945, 973, 1515, 1591, 1929
Hpy188III TCNNGA 5 cut(s) 177, 865, 977, 1241, 1715
Hpy8I GTNNAC 4 cut(s) 307, 401, 703, 1794
HpyAV CCTTC 6 cut(s) 118, 149, 174, 314, 1047, 1629
HpyCH4III ACNGT 5 cut(s) 374, 451, 628, 1440, 1655
HpyCH4IV ACGT 1 cut(s) 1434
HpyF10VI GCNNNNNNNGC 3 cut(s) 21, 54, 230
HpyF3I CTNAG 4 cut(s) 1366, 1461, 1485, 1512
HpySE526I ACGT 1 cut(s) 1434
Ksp22I TGATCA 1 cut(s) 1150
Kzo9I GATC 6 cut(s) 266, 484, 513, 973, 1150, 1750
Lsp1109I GCAGC 3 cut(s) 33, 1100, 1733
LweI GCATC 3 cut(s) 151, 891, 1943
MaeI CTAG 6 cut(s) 986, 1058, 1217, 1578, 1715, 1944
MaeII ACGT 1 cut(s) 1434
MaeIII GTNAC 4 cut(s) 445, 563, 730, 1280
MalI GATC 6 cut(s) 268, 486, 515, 975, 1152, 1752
MboI GATC 6 cut(s) 266, 484, 513, 973, 1150, 1750
MfeI CAATTG 1 cut(s) 735
MflI RGATCY 1 cut(s) 484
MhlI GDGCHC 1 cut(s) 192
MlyI GAGTC 3 cut(s) 455, 1086, 1176
MmeI TCCRAC 4 cut(s) 196, 792, 1422, 1762
MnlI CCTC 9 cut(s) 776, 1061, 1103, 1375, 1516, 1566, 1834, 1917, 1923
Mph1103I ATGCAT 3 cut(s) 592, 1273, 1890
MseI TTAA 3 cut(s) 432, 798, 1202
MslI CAYNNNNRTG 2 cut(s) 299, 899
MspA1I CMGCKG 1 cut(s) 1724
MspI CCGG 5 cut(s) 499, 573, 756, 960, 1868
MspR9I CCNGG 5 cut(s) 198, 466, 574, 669, 888
MunI CAATTG 1 cut(s) 735
Mva1269I GAATGC 1 cut(s) 1259
MvaI CCWGG 4 cut(s) 198, 466, 669, 888
MwoI GCNNNNNNNGC 3 cut(s) 21, 54, 230
NciI CCSGG 1 cut(s) 574
NdeI CATATG 2 cut(s) 917, 1879
NdeII GATC 6 cut(s) 266, 484, 513, 973, 1150, 1750
NheI GCTAGC 1 cut(s) 985
NlaIV GGNNCC 4 cut(s) 486, 503, 1312, 1551
NsiI ATGCAT 3 cut(s) 592, 1273, 1890
NspI RCATGY 3 cut(s) 224, 1082, 1888
PagI TCATGA 1 cut(s) 1240
PctI GAATGC 1 cut(s) 1259
PfeI GAWTC 5 cut(s) 556, 940, 1134, 1496, 1586
PkrI GCNGC 6 cut(s) 23, 395, 774, 1115, 1199, 1723
PleI GAGTC 3 cut(s) 455, 1086, 1175
PpsI GAGTC 3 cut(s) 455, 1086, 1175
PsiI TTATAA 1 cut(s) 603
Psp124BI GAGCTC 1 cut(s) 192
Psp6I CCWGG 4 cut(s) 196, 464, 667, 886
PspGI CCWGG 4 cut(s) 196, 464, 667, 886
PspN4I GGNNCC 4 cut(s) 486, 503, 1312, 1551
PspPI GGNCC 2 cut(s) 501, 1549
PstNI CAGNNNCTG 1 cut(s) 1148
PsuI RGATCY 1 cut(s) 484
PvuII CAGCTG 1 cut(s) 1724
RsaI GTAC 4 cut(s) 28, 1343, 1437, 1795
RsaNI GTAC 4 cut(s) 27, 1342, 1436, 1794
RseI CAYNNNNRTG 2 cut(s) 299, 899
SacI GAGCTC 1 cut(s) 192
SalI GTCGAC 1 cut(s) 305
SaqAI TTAA 3 cut(s) 432, 798, 1202
SatI GCNGC 6 cut(s) 22, 394, 773, 1114, 1198, 1722
Sau3AI GATC 6 cut(s) 266, 484, 513, 973, 1150, 1750
Sau96I GGNCC 2 cut(s) 501, 1549
SchI GAGTC 3 cut(s) 455, 1086, 1176
ScrFI CCNGG 5 cut(s) 198, 466, 574, 669, 888
SduI GDGCHC 1 cut(s) 192
SfaNI GCATC 3 cut(s) 151, 891, 1943
SmiMI CAYNNNNRTG 2 cut(s) 299, 899
SmlI CTYRAG 1 cut(s) 977
SmoI CTYRAG 1 cut(s) 977
SsiI CCGC 6 cut(s) 393, 396, 772, 1198, 1501, 1632
SspI AATATT 2 cut(s) 52, 1711
SspMI CTAG 6 cut(s) 986, 1058, 1217, 1578, 1715, 1944
SstI GAGCTC 1 cut(s) 192
StyD4I CCNGG 5 cut(s) 196, 464, 572, 667, 886
StyI CCWWGG 3 cut(s) 1063, 1105, 1617
TaaI ACNGT 5 cut(s) 374, 451, 628, 1440, 1655
TaiI ACGT 1 cut(s) 1437
TaqI TCGA 8 cut(s) 126, 210, 306, 459, 642, 803, 1210, 1753
TatI WGTACW 1 cut(s) 1793
TauI GCSGC 3 cut(s) 396, 775, 1200
TfiI GAWTC 5 cut(s) 556, 940, 1134, 1496, 1586
Tru1I TTAA 3 cut(s) 432, 798, 1202
Tru9I TTAA 3 cut(s) 432, 798, 1202
TscAI CASTG 2 cut(s) 262, 276
TseI GCWGC 3 cut(s) 21, 1113, 1721
TspRI CASTG 2 cut(s) 262, 276
XapI RAATTY 1 cut(s) 329
XbaI TCTAGA 1 cut(s) 1714
XceI RCATGY 3 cut(s) 224, 1082, 1888
XcmI CCANNNNNNNNNTGG 2 cut(s) 137, 1677
XmiI GTMKAC 1 cut(s) 306
XspI CTAG 6 cut(s) 986, 1058, 1217, 1578, 1715, 1944
Zsp2I ATGCAT 3 cut(s) 592, 1273, 1890
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.