Rorug02G0150900

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
13374059 .. 13379174
5116 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0150900.1

Sequence Viewer

Length: 1932 bp
ATGGCGGATACTCTGAGCGCTTTGAGGTCTCTAATGGCGTCTCACTCTCCTCCTCTTGACGCCTTGGTTGTTCCTTCCGAAGATTACCATCAGAGTGAGTATGTTTCTGACAGAGACAAAAGGCGTCAATTCGTTTCTGGCTTCACTGGAAGCGCCGGTTTGGCGCTTATAACCACGAATGAAGCTCGGTTATGGACAGATGGCCGTTACTTTTTGCAGGCAACGCAGCAACTTAGTGACCAGTGGCAGCTTATGCGAATGGGGGAAGACCCTGCCGTAGATGTCTGGATGGCAGATTATCTCCCTGAAGGTTCAGCCATTGGTATCGACCCTTGGTGTATATCAGTAGACACCGCACAGAAATGGGAGCGTGCTTTTGTCAAGAATCAACAGAAGTTGGTTCAAACTTCCACAAATTTGGTAGATGAAGTTTGGAAAAGTCAGCCCCCTCAGGAAATTAATCCTGTAGTTATTCATCCTTTGGAATTTGCTGGTCGTTCTGTAGCAGATAAGTTGAAGGATGTGAGAAAAAAGCTCGTCCAAGTGAAAGCTCATAGCATAATCATCTCAGCACTTGATGAGGTTTGCTGGTTGTATAATATTCGCGGTACTGATGTTGATTACAGTCCAGTTGTTCATGCCTTTGCCATAGTTACTCTGAACTCAGCGTTCTTCTATGTGGACAAAAGGAAGGTTTCATCTGAGGTAAACTCATACTTGGAAACGAACGGGATTGAAGTTCGGGACTATAAAGCAGTGAGCGCAGATGTCAGCTTGCTTGCATCTAATCAGCTTAAACCTTCTATTCAAGGCAAGGGAACTGAAACTGGAATAGCAGGAAATGGTACAATCAAAGCAGAAGAAAGTAATAATGACCTCATATGGGCTGACCCGGGTTATTGCTGTTATGCTTTGTATTCAAAGCTAAATCCTGACAAGGTTCTCTTGCAGCAGTCACCTTTGGCCCTTGCAAAAGCTCTAAAGAACCCAATTGAGTTGGAAGGGTTAAAGAATGCTCACATTCGAGATGGTGCGGCTGTTGTGCAATATCATGTCTGGTTGGATAAACAGATGCAGGAGATGTATGGAGCTTCTGGTTTCTTTTTGGAGGATGAAACAGATAAGAAAAAACAGTCGAAAACTGCAAAACTAACTGAGGTGACTGCAAGCGATAAGCTGGAAGGCTTTCGAGCATCAAAAGAGAACTTTAGAGGATTAAGCTTCCCTACTATCTCCTCAGTTGGTCCAAATGCTGCCATTATCCATTATTCACCACAAGCAGAAACTTGTGCTGAGTTGGATCCAGACCGCATATATCTTTTCGACTCTGGAGCACAGTATCTGGATGGAACAACTGACATAACTCGGACAGTTCATTTCGGGAAACCTTCAGCTCATGAGAAAGCATGCTATACGGCAGTCCTCAAGGGTCACATTGCTCTAGGGAATGCTCGTTTTCCTAATGGAACCAATGGTCATTCCCTGGACATTCTGGCTCGAGTTCCTTTGTGGAAGGATGGTCTCGATTATCGACATGGTACTGGTCATGGGATTGGATCTTACCTAAATGTTCATGAAGGACCTCATTTAATTAGCTTCAGACCTCGAAATGTCCCACTGGAAGATACCATGACTGTAACAGATGAACCTGGATACTATGAAGATGGGAATTTTGGTATAAGACTGGAGAACGTGCTTATAATCAAGAAAGCTGATACAAAATTCAACTTTGGTGACAAGGGCTACTTGCAATTTGAGCATATAACATGGGCACCCTATCAGAGGAAGTTAATTGACGTGGGTCTTTTAACACCCGAAGAGTTGGAATGGCTGAACACCTACCATGCCAATTGTAGATCTATTCTGGACTCATACTTGGATGAATCTGAGAAGGCATGGCTGAAGAAAGCCACTGAACCCATCAGTGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

643

Amino Acids

71.8

Weight (kDa)

5.57

Isoelectric Point (pI)

29.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Creatinase_N PF01321 6 - 138 1.7e-13 Creatinase/Prolidase N-terminal domain
Creatinase_N_2 PF16189 148 - 332 1.8e-46 Creatinase/Prolidase N-terminal domain
Peptidase_M24 PF00557 383 - 569 1.1e-47 Metallopeptidase family M24
Peptidase_M24_C PF16188 581 - 641 1e-24 C-terminal region of peptidase_M24
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 170, 1700
AccB1I GGYRCC 1 cut(s) 1771
AccI GTMKAC 1 cut(s) 348
AccII CGCG 1 cut(s) 606
AciI CCGC 5 cut(s) 5, 354, 606, 1034, 1309
AclWI GGATC 3 cut(s) 1295, 1308, 1564
AcoI YGGCCR 1 cut(s) 202
AcsI RAATTY 4 cut(s) 415, 485, 1669, 1721
AcuI CTGAAG 4 cut(s) 327, 1374, 1582, 1922
AcyI GRCGYC 3 cut(s) 38, 60, 124
AfaI GTAC 3 cut(s) 610, 847, 1540
AfeI AGCGCT 1 cut(s) 19
AfiI CCNNNNNNNGG 2 cut(s) 883, 1782
AgsI TTSAA 6 cut(s) 404, 517, 737, 809, 921, 1726
AjiI CACGTC 1 cut(s) 1798
AjnI CCWGG 2 cut(s) 1482, 1648
Alw21I GWGCWC 1 cut(s) 1336
Alw26I GTCTC 4 cut(s) 33, 45, 108, 1526
AlwI GGATC 3 cut(s) 1295, 1308, 1564
AlwNI CAGNNNCTG 1 cut(s) 1342
Ama87I CYCGRG 2 cut(s) 892, 1497
Aor51HI AGCGCT 1 cut(s) 19
AoxI GGCC 2 cut(s) 202, 963
ApeKI GCWGC 4 cut(s) 226, 247, 949, 1253
ApoI RAATTY 4 cut(s) 415, 485, 1669, 1721
AseI ATTAAT 1 cut(s) 459
Asp700I GAANNNNTTC 1 cut(s) 1185
AspLEI GCGC 4 cut(s) 20, 155, 166, 764
AspS9I GGNCC 3 cut(s) 964, 1244, 1580
AsuC2I CCSGG 2 cut(s) 893, 894
AsuHPI GGTGA 4 cut(s) 948, 1171, 1263, 1745
AvaI CYCGRG 2 cut(s) 892, 1497
AvaII GGWCC 2 cut(s) 1244, 1580
AxyI CCTNAGG 1 cut(s) 450
BaeGI GKGCMC 1 cut(s) 1774
BaeI ACNNNNGTAYC 2 cut(s) 600, 633
BamHI GGATCC 1 cut(s) 1300
BanI GGYRCC 1 cut(s) 1771
BbsI GAAGAC 1 cut(s) 273
Bbv12I GWGCWC 1 cut(s) 1336
BbvI GCAGC 4 cut(s) 238, 259, 961, 1240
BccI CCATC 8 cut(s) 96, 194, 283, 1022, 1340, 1511, 1658, 1928
BceAI ACGGC 3 cut(s) 189, 260, 1431
BciT130I CCWGG 2 cut(s) 1484, 1650
BciVI GTATCC 1 cut(s) 1646
BcnI CCSGG 2 cut(s) 893, 894
BcoDI GTCTC 4 cut(s) 33, 45, 108, 1526
BfaI CTAG 1 cut(s) 1442
BfmI CTRYAG 2 cut(s) 465, 501
BfoI RGCGCY 3 cut(s) 21, 156, 167
BfuI GTATCC 1 cut(s) 1646
BglI GCCNNNNNGGC 1 cut(s) 161
BglII AGATCT 1 cut(s) 1856
BisI GCNGC 5 cut(s) 227, 248, 950, 1035, 1254
BlsI GCNGC 5 cut(s) 228, 249, 951, 1036, 1255
Bme1390I CCNGG 4 cut(s) 893, 894, 1484, 1650
Bme18I GGWCC 2 cut(s) 1244, 1580
BmeT110I CYCGRG 2 cut(s) 892, 1497
BmgBI CACGTC 1 cut(s) 1798
BmgT120I GGNCC 3 cut(s) 964, 1244, 1580
BmiI GGNNCC 3 cut(s) 1302, 1468, 1773
BmrFI CCNGG 4 cut(s) 893, 894, 1484, 1650
BmsI GCATC 3 cut(s) 791, 1062, 1202
BoxI GACNNNNGTC 1 cut(s) 1800
BpiI GAAGAC 1 cut(s) 273
BplI GAGNNNNNCTC 2 cut(s) 695, 727
BpmI CTGGAG 2 cut(s) 1350, 1706
BpuEI CTTGAG 1 cut(s) 1409
BpuMI CCSGG 2 cut(s) 893, 894
BsaBI GATNNNNATC 1 cut(s) 87
BsaHI GRCGYC 3 cut(s) 38, 60, 124
BsaI GGTCTC 2 cut(s) 33, 1526
BsaJI CCNNGG 4 cut(s) 63, 332, 892, 1482
Bsc4I CCNNNNNNNGG 2 cut(s) 883, 1782
Bse118I RCCGGY 1 cut(s) 155
Bse1I ACTGG 7 cut(s) 151, 241, 629, 832, 1546, 1623, 1689
Bse21I CCTNAGG 1 cut(s) 450
Bse3DI GCAATG 1 cut(s) 1434
Bse8I GATNNNNATC 1 cut(s) 87
BseBI CCWGG 2 cut(s) 1484, 1650
BseDI CCNNGG 4 cut(s) 63, 332, 892, 1482
BseGI GGATG 7 cut(s) 294, 475, 526, 1117, 1351, 1522, 1885
BseJI GATNNNNATC 1 cut(s) 87
BseLI CCNNNNNNNGG 2 cut(s) 883, 1782
BseMI GCAATG 1 cut(s) 1434
BseMII CTCAG 9 cut(s) 5, 464, 582, 678, 693, 1146, 1251, 1284, 1878
BseNI ACTGG 7 cut(s) 151, 241, 629, 832, 1546, 1623, 1689
BseRI GAGGAG 3 cut(s) 39, 42, 1225
BseSI GKGCMC 1 cut(s) 1774
BseXI GCAGC 4 cut(s) 238, 259, 961, 1240
Bsh1236I CGCG 1 cut(s) 606
BshFI GGCC 2 cut(s) 204, 965
BshNI GGYRCC 1 cut(s) 1771
BsiHKAI GWGCWC 1 cut(s) 1336
BsiHKCI CYCGRG 2 cut(s) 892, 1497
BsiSI CCGG 2 cut(s) 156, 893
BslFI GGGAC 2 cut(s) 758, 1598
BslI CCNNNNNNNGG 2 cut(s) 883, 1782
BsmAI GTCTC 4 cut(s) 33, 45, 108, 1526
BsmBI CGTCTC 1 cut(s) 45
BsmFI GGGAC 2 cut(s) 758, 1598
BsmI GAATGC 2 cut(s) 1018, 1453
BsnI GGCC 2 cut(s) 204, 965
Bso31I GGTCTC 2 cut(s) 33, 1526
BsoBI CYCGRG 2 cut(s) 892, 1497
Bsp1286I GDGCHC 2 cut(s) 1336, 1774
Bsp143I GATC 3 cut(s) 1300, 1556, 1856
BspACI CCGC 5 cut(s) 5, 354, 606, 1034, 1309
BspANI GGCC 2 cut(s) 204, 965
BspCNI CTCAG 9 cut(s) 6, 463, 581, 677, 694, 1147, 1250, 1285, 1879
BspFNI CGCG 1 cut(s) 606
BspHI TCATGA 2 cut(s) 1396, 1573
BspLI GGNNCC 3 cut(s) 1302, 1468, 1773
BspPI GGATC 3 cut(s) 1295, 1308, 1564
BspT107I GGYRCC 1 cut(s) 1771
BspTNI GGTCTC 2 cut(s) 33, 1526
BsrDI GCAATG 1 cut(s) 1434
BsrFI RCCGGY 1 cut(s) 155
BsrI ACTGG 7 cut(s) 151, 241, 629, 832, 1546, 1623, 1689
BssAI RCCGGY 1 cut(s) 155
BssECI CCNNGG 4 cut(s) 63, 332, 892, 1482
BssMI GATC 3 cut(s) 1300, 1556, 1856
BssNI GRCGYC 3 cut(s) 38, 60, 124
BssT1I CCWWGG 2 cut(s) 63, 332
Bst2UI CCWGG 2 cut(s) 1484, 1650
Bst4CI ACNGT 5 cut(s) 626, 1134, 1338, 1372, 1636
Bst6I CTCTTC 1 cut(s) 1812
BstACI GRCGYC 3 cut(s) 38, 60, 124
BstAPI GCANNNNNTGC 1 cut(s) 253
BstC8I GCNNGC 6 cut(s) 219, 372, 776, 780, 1168, 1408
BstENI CCTNNNNNAGG 1 cut(s) 1780
BstF5I GGATG 7 cut(s) 294, 475, 526, 1117, 1351, 1522, 1885
BstFNI CGCG 1 cut(s) 606
BstH2I RGCGCY 3 cut(s) 21, 156, 167
BstHHI GCGC 4 cut(s) 20, 155, 166, 764
BstKTI GATC 3 cut(s) 1303, 1559, 1859
BstMAI GTCTC 4 cut(s) 33, 45, 108, 1526
BstMBI GATC 3 cut(s) 1300, 1556, 1856
BstMWI GCNNNNNNNGC 5 cut(s) 161, 223, 253, 761, 1756
BstNI CCWGG 2 cut(s) 1484, 1650
BstNSI RCATGY 1 cut(s) 1410
BstPAI GACNNNNGTC 1 cut(s) 1800
BstSCI CCNGG 4 cut(s) 891, 892, 1482, 1648
BstSFI CTRYAG 2 cut(s) 465, 501
BstSLI GKGCMC 1 cut(s) 1774
BstUI CGCG 1 cut(s) 606
BstV1I GCAGC 4 cut(s) 238, 259, 961, 1240
BstV2I GAAGAC 1 cut(s) 273
BstX2I RGATCY 3 cut(s) 1300, 1556, 1856
BstXI CCANNNNNNTGG 1 cut(s) 418
BstYI RGATCY 3 cut(s) 1300, 1556, 1856
Bsu36I CCTNAGG 1 cut(s) 450
BsuI GTATCC 1 cut(s) 1646
BsuRI GGCC 2 cut(s) 204, 965
BtrI CACGTC 1 cut(s) 1798
BtsCI GGATG 7 cut(s) 294, 475, 526, 1117, 1351, 1522, 1885
BtsI GCAGTG 1 cut(s) 762
BtsIMutI CAGTG 6 cut(s) 144, 248, 762, 1616, 1911, 1930
Cac8I GCNNGC 6 cut(s) 219, 372, 776, 780, 1168, 1408
CaiI CAGNNNCTG 1 cut(s) 1342
CciI TCATGA 2 cut(s) 1396, 1573
CfoI GCGC 4 cut(s) 20, 155, 166, 764
Cfr10I RCCGGY 1 cut(s) 155
Cfr13I GGNCC 3 cut(s) 964, 1244, 1580
Cfr9I CCCGGG 1 cut(s) 892
CseI GACGC 3 cut(s) 27, 68, 113
Csp6I GTAC 3 cut(s) 609, 846, 1539
CviQI GTAC 3 cut(s) 609, 846, 1539
DpnI GATC 3 cut(s) 1302, 1558, 1858
DpnII GATC 3 cut(s) 1300, 1556, 1856
EaeI YGGCCR 1 cut(s) 202
Eam1104I CTCTTC 1 cut(s) 1812
EarI CTCTTC 1 cut(s) 1812
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 2 cut(s) 63, 332
Eco31I GGTCTC 2 cut(s) 33, 1526
Eco47I GGWCC 2 cut(s) 1244, 1580
Eco47III AGCGCT 1 cut(s) 19
Eco57I CTGAAG 4 cut(s) 327, 1374, 1582, 1922
Eco81I CCTNAGG 1 cut(s) 450
Eco88I CYCGRG 2 cut(s) 892, 1497
EcoNI CCTNNNNNAGG 1 cut(s) 1780
EcoO109I RGGNCCY 1 cut(s) 1580
EcoRII CCWGG 2 cut(s) 1482, 1648
EcoT14I CCWWGG 2 cut(s) 63, 332
ErhI CCWWGG 2 cut(s) 63, 332
Esp3I CGTCTC 1 cut(s) 45
FalI AAGNNNNNCTT 4 cut(s) 929, 961, 1730, 1762
FaqI GGGAC 2 cut(s) 758, 1598
FauNDI CATATG 1 cut(s) 881
FblI GTMKAC 1 cut(s) 348
Fnu4HI GCNGC 5 cut(s) 227, 248, 950, 1035, 1254
FokI GGATG 7 cut(s) 301, 462, 533, 1124, 1358, 1529, 1892
Fsp4HI GCNGC 5 cut(s) 227, 248, 950, 1035, 1254
FspBI CTAG 1 cut(s) 1442
GlaI GCGC 4 cut(s) 19, 154, 165, 763
GluI GCNGC 5 cut(s) 227, 248, 950, 1035, 1254
GsuI CTGGAG 2 cut(s) 1350, 1706
HaeII RGCGCY 3 cut(s) 21, 156, 167
HaeIII GGCC 2 cut(s) 204, 965
HapII CCGG 2 cut(s) 156, 893
HgaI GACGC 3 cut(s) 27, 68, 113
HhaI GCGC 4 cut(s) 20, 155, 166, 764
Hin1I GRCGYC 3 cut(s) 38, 60, 124
Hin6I GCGC 4 cut(s) 18, 153, 164, 762
HinP1I GCGC 4 cut(s) 18, 153, 164, 762
HindIII AAGCTT 1 cut(s) 1219
HinfI GANTC 4 cut(s) 385, 1325, 1868, 1883
HpaII CCGG 2 cut(s) 156, 893
HphI GGTGA 4 cut(s) 948, 1171, 1263, 1745
Hpy166II GTNNAC 3 cut(s) 349, 682, 709
Hpy8I GTNNAC 3 cut(s) 349, 682, 709
HpyCH4III ACNGT 5 cut(s) 626, 1134, 1338, 1372, 1636
HpyCH4IV ACGT 2 cut(s) 1692, 1797
HpyCH4V TGCA 9 cut(s) 217, 782, 949, 971, 1045, 1075, 1145, 1166, 1750
HpyF10VI GCNNNNNNNGC 5 cut(s) 161, 223, 253, 761, 1756
HpySE526I ACGT 2 cut(s) 1692, 1797
Hsp92I GRCGYC 3 cut(s) 38, 60, 124
HspAI GCGC 4 cut(s) 18, 153, 164, 762
Kzo9I GATC 3 cut(s) 1300, 1556, 1856
LmnI GCTCC 3 cut(s) 367, 1088, 1331
Lsp1109I GCAGC 4 cut(s) 238, 259, 961, 1240
LweI GCATC 3 cut(s) 791, 1062, 1202
MaeI CTAG 1 cut(s) 1442
MaeII ACGT 2 cut(s) 1692, 1797
MaeIII GTNAC 8 cut(s) 206, 236, 652, 954, 1159, 1430, 1636, 1733
MalI GATC 3 cut(s) 1302, 1558, 1858
MboI GATC 3 cut(s) 1300, 1556, 1856
MboII GAAGA 8 cut(s) 92, 278, 664, 872, 1634, 1673, 1829, 1915
MfeI CAATTG 2 cut(s) 990, 1849
MflI RGATCY 3 cut(s) 1300, 1556, 1856
MhlI GDGCHC 2 cut(s) 1336, 1774
MlyI GAGTC 2 cut(s) 1319, 1862
MmeI TCCRAC 4 cut(s) 978, 1041, 1278, 1803
MroXI GAANNNNTTC 1 cut(s) 1185
MseI TTAA 7 cut(s) 459, 795, 1007, 1217, 1589, 1790, 1808
MslI CAYNNNNRTG 3 cut(s) 93, 361, 1925
MspI CCGG 2 cut(s) 156, 893
MspR9I CCNGG 4 cut(s) 893, 894, 1484, 1650
MunI CAATTG 2 cut(s) 990, 1849
Mva1269I GAATGC 2 cut(s) 1018, 1453
MvaI CCWGG 2 cut(s) 1484, 1650
MvnI CGCG 1 cut(s) 606
MwoI GCNNNNNNNGC 5 cut(s) 161, 223, 253, 761, 1756
NciI CCSGG 2 cut(s) 893, 894
NdeI CATATG 1 cut(s) 881
NdeII GATC 3 cut(s) 1300, 1556, 1856
NlaIV GGNNCC 3 cut(s) 1302, 1468, 1773
NmuCI GTSAC 5 cut(s) 236, 954, 1159, 1430, 1733
NspI RCATGY 1 cut(s) 1410
PaeI GCATGC 1 cut(s) 1410
PaeR7I CTCGAG 1 cut(s) 1497
PagI TCATGA 2 cut(s) 1396, 1573
PctI GAATGC 2 cut(s) 1018, 1453
PdmI GAANNNNTTC 1 cut(s) 1185
PfeI GAWTC 2 cut(s) 385, 1883
PkrI GCNGC 5 cut(s) 228, 249, 951, 1036, 1255
PleI GAGTC 2 cut(s) 1319, 1862
PpsI GAGTC 2 cut(s) 1319, 1862
PpuMI RGGWCCY 1 cut(s) 1580
PshAI GACNNNNGTC 1 cut(s) 1800
PshBI ATTAAT 1 cut(s) 459
PsiI TTATAA 2 cut(s) 170, 1700
Psp5II RGGWCCY 1 cut(s) 1580
Psp6I CCWGG 2 cut(s) 1482, 1648
PspGI CCWGG 2 cut(s) 1482, 1648
PspN4I GGNNCC 3 cut(s) 1302, 1468, 1773
PspPI GGNCC 3 cut(s) 964, 1244, 1580
PspPPI RGGWCCY 1 cut(s) 1580
PspXI VCTCGAGB 1 cut(s) 1497
PstNI CAGNNNCTG 1 cut(s) 1342
PsuI RGATCY 3 cut(s) 1300, 1556, 1856
RsaI GTAC 3 cut(s) 610, 847, 1540
RsaNI GTAC 3 cut(s) 609, 846, 1539
RseI CAYNNNNRTG 3 cut(s) 93, 361, 1925
SaqAI TTAA 7 cut(s) 459, 795, 1007, 1217, 1589, 1790, 1808
SatI GCNGC 5 cut(s) 227, 248, 950, 1035, 1254
Sau3AI GATC 3 cut(s) 1300, 1556, 1856
Sau96I GGNCC 3 cut(s) 964, 1244, 1580
SchI GAGTC 2 cut(s) 1319, 1862
ScrFI CCNGG 4 cut(s) 893, 894, 1484, 1650
SduI GDGCHC 2 cut(s) 1336, 1774
SfaNI GCATC 3 cut(s) 791, 1062, 1202
SfcI CTRYAG 2 cut(s) 465, 501
Sfr274I CTCGAG 1 cut(s) 1497
SinI GGWCC 2 cut(s) 1244, 1580
SlaI CTCGAG 1 cut(s) 1497
SmaI CCCGGG 1 cut(s) 894
SmiMI CAYNNNNRTG 3 cut(s) 93, 361, 1925
SmlI CTYRAG 2 cut(s) 1424, 1497
SmoI CTYRAG 2 cut(s) 1424, 1497
SphI GCATGC 1 cut(s) 1410
SsiI CCGC 5 cut(s) 5, 354, 606, 1034, 1309
SspI AATATT 1 cut(s) 601
SspMI CTAG 1 cut(s) 1442
StyD4I CCNGG 4 cut(s) 891, 892, 1482, 1648
StyI CCWWGG 2 cut(s) 63, 332
TaaI ACNGT 5 cut(s) 626, 1134, 1338, 1372, 1636
TaiI ACGT 2 cut(s) 1695, 1800
TaqI TCGA 9 cut(s) 327, 1024, 1136, 1189, 1323, 1498, 1524, 1531, 1606
TauI GCSGC 1 cut(s) 1037
TfiI GAWTC 2 cut(s) 385, 1883
Tru1I TTAA 7 cut(s) 459, 795, 1007, 1217, 1589, 1790, 1808
Tru9I TTAA 7 cut(s) 459, 795, 1007, 1217, 1589, 1790, 1808
TscAI CASTG 6 cut(s) 151, 248, 762, 1623, 1918, 1930
TseFI GTSAC 5 cut(s) 236, 954, 1159, 1430, 1733
TseI GCWGC 4 cut(s) 226, 247, 949, 1253
Tsp45I GTSAC 5 cut(s) 236, 954, 1159, 1430, 1733
TspMI CCCGGG 1 cut(s) 892
TspRI CASTG 6 cut(s) 151, 248, 762, 1623, 1918, 1930
VpaK11BI GGWCC 2 cut(s) 1244, 1580
VspI ATTAAT 1 cut(s) 459
XagI CCTNNNNNAGG 1 cut(s) 1780
XapI RAATTY 4 cut(s) 415, 485, 1669, 1721
XceI RCATGY 1 cut(s) 1410
XhoI CTCGAG 1 cut(s) 1497
XmaI CCCGGG 1 cut(s) 892
XmiI GTMKAC 1 cut(s) 348
XmnI GAANNNNTTC 1 cut(s) 1185
XspI CTAG 1 cut(s) 1442
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.