MD08G1054400.v1.1

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Reverse (-)
4259116 .. 4260534
1419 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1054400.v1.1.491

Sequence Viewer

Length: 1419 bp
ATGTGTTCAGAATTGAAACACAAATTTTCTGTCGAATTTACACGAAAAGTTATTGAAATGTATCAAAGAAGGCTGTCAAATTTTAGTCTCTTGAACATTTTCATCATCATCAATTGTTTCCTTCCCTTGACTTTTGCCCATCCACTTTCCTTCAACATCACTCACTTCTATCCCGGAACAAAAAACGACACTATTTCCTATGGAGGTGACGCTGTGCCTTCTTCGTCAGGAGTGATTGAACTCAACATTGTCACAGAATTATTCCGCACTGGCCGGGCCACGTATGCAAGGCCTCTGCACCTATGGGACAAGGCTAAGGGGACACTCTCAGACTTCACTACTAATTTCTACTTCACAATTGACACTCTTAACAACACCAACTTCGGTGATGGACTTGTCTTTTTCCTTGCCCCAGTTCACTTCCCAATCCCGCCAGACTCCAATGGTTCTGATCTCGGACTATTTAACGCCACCTCTCGTTTTGCCAAGTCCACTAACCAGCTCGTAATGGTGGAGTTTGACACTTTCACAAACCCATGGGATCCTCCAGGGTCACACGTAGGGATCAATATAAACGAAATTTCCTCAGTTGTTACTGCAAGCTGGAACGCAAGCTTCAACAGCGGGAAGGTTGCGCATGTTAGGATAGATTACAATGCTACCACCAAGAACCTAAGCGTGTTTTGGAGATATGAGGAAGACCCTGATCACAATGTGGGAAGATCTTCCCTTTCTTATGTTGTTGATCTAAGAAAGGTTCTACCAGAGCGCGTTACTACTGGATTCTCAGCTGCTACCGGCGCTTTCAATGAGCGCCACGTCATATATTCATGGGATTTCACTTCAAGTTTGGATTCAGATAGCAAAAAGAAGGGAATTTGGAGGCCAATTTTGATTGCTGTAGCAGTTACTTCTCTCGTGTTGGTCCTCGGCGTAGCCATATGGTGGTTCATGACGGATCGGACGAGTAGTACCAGTACCAAAACTGGTGGAGCTGGAAATACCACCAATCATGTGCCCCGTACACATAATCTTCAGAGCCTTTCCTTGCCAAAAGAATTTTCTTACCAAGAATTAGTTGAAGCCACCAACGGCTTTGCTGACGAAAACAGGCTAGGCCAAGGAGCGTCGGCGCATGTTTATAAAGGAACATTAAAAGATCTAGCCTTCCCGGTTGCTGTCAAGAAATTCCTTGCTGAGTCTGAACAGTACGAGAGCCTTTTCATCAACGAAGTCACAGTAATAAGGCGTGTAATGCATCGAAACTTGGTGCAATTCGTTGGATGGTGTTATGAGCAGGCCGAATGCTTCCTTGTTTATGCATACATGCCTTGTTGGTATATGGTCCAGCCCATGATCAATGTTCTAGATTATTCTAGTAAGCAAGAGATGAGGCTGGAGCTTGCTAGACAATTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

473

Amino Acids

53.35

Weight (kDa)

6.68

Isoelectric Point (pI)

36.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 49 - 290 5e-72 Legume lectin domain
Lectin_L-type_dom PF18483 110 - 275 4.9e-06 Legume lectin beta-barrel domain
Pkinase PF00069 367 - 445 5.9e-10 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 369 - 445 3e-11 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1143
Acc16I TGCGCA 1 cut(s) 636
AccB7I CCANNNNNTGG 1 cut(s) 945
AccII CGCG 1 cut(s) 771
AciI CCGC 3 cut(s) 265, 431, 624
AclWI GGATC 4 cut(s) 536, 549, 572, 966
AcoI YGGCCR 1 cut(s) 271
AcsI RAATTY 7 cut(s) 23, 35, 79, 579, 876, 1058, 1187
AcuI CTGAAG 1 cut(s) 1019
AdeI CACNNNGTG 1 cut(s) 715
AfaI GTAC 4 cut(s) 973, 979, 1024, 1211
AfiI CCNNNNNNNGG 1 cut(s) 945
AflIII ACRYGT 1 cut(s) 556
AgsI TTSAA 9 cut(s) 16, 56, 94, 154, 239, 619, 808, 846, 1082
AjiI CACGTC 1 cut(s) 820
AjnI CCWGG 1 cut(s) 547
AjuI GAANNNNNNNTTGG 2 cut(s) 1045, 1077
AluBI AGCT 6 cut(s) 502, 603, 615, 791, 995, 1402
AluI AGCT 6 cut(s) 502, 603, 615, 791, 995, 1402
Alw26I GTCTC 1 cut(s) 92
AlwI GGATC 4 cut(s) 536, 549, 572, 966
AoxI GGCC 6 cut(s) 271, 276, 290, 884, 1117, 1299
ApeKI GCWGC 1 cut(s) 791
ApoI RAATTY 7 cut(s) 23, 35, 79, 579, 876, 1058, 1187
ArsI GACNNNNNNTTYG 2 cut(s) 15, 47
Asp700I GAANNNNTTC 2 cut(s) 98, 724
AspLEI GCGC 5 cut(s) 637, 771, 803, 816, 1135
AspS9I GGNCC 3 cut(s) 276, 925, 1345
AsuC2I CCSGG 3 cut(s) 174, 275, 1172
AsuHPI GGTGA 2 cut(s) 218, 398
AvaII GGWCC 2 cut(s) 925, 1345
BaeGI GKGCMC 1 cut(s) 1020
BamHI GGATCC 1 cut(s) 541
BauI CACGAG 1 cut(s) 917
BbsI GAAGAC 1 cut(s) 705
BbvI GCAGC 1 cut(s) 778
BccI CCATC 3 cut(s) 147, 383, 1278
BceAI ACGGC 1 cut(s) 1108
BciT130I CCWGG 1 cut(s) 549
BclI TGATCA 2 cut(s) 706, 1356
BcnI CCSGG 3 cut(s) 174, 275, 1172
BcoDI GTCTC 1 cut(s) 92
BfaI CTAG 6 cut(s) 1115, 1163, 1367, 1377, 1407, 1417
BfmI CTRYAG 1 cut(s) 900
BfoI RGCGCY 2 cut(s) 804, 817
BglII AGATCT 2 cut(s) 722, 1159
BisI GCNGC 1 cut(s) 792
BlsI GCNGC 1 cut(s) 793
Bme1390I CCNGG 4 cut(s) 174, 275, 549, 1172
Bme18I GGWCC 2 cut(s) 925, 1345
BmgBI CACGTC 1 cut(s) 820
BmgT120I GGNCC 3 cut(s) 276, 925, 1345
BmiI GGNNCC 1 cut(s) 543
BmrFI CCNGG 4 cut(s) 174, 275, 549, 1172
BmrI ACTGGG 1 cut(s) 407
BmsI GCATC 1 cut(s) 1267
BmuI ACTGGG 1 cut(s) 407
BpiI GAAGAC 1 cut(s) 705
BpmI CTGGAG 2 cut(s) 531, 1418
Bpu10I CCTNAGC 2 cut(s) 315, 674
BpuMI CCSGG 3 cut(s) 174, 275, 1172
BsaAI YACGTR 2 cut(s) 282, 559
BsaJI CCNNGG 4 cut(s) 536, 548, 928, 1120
Bsc4I CCNNNNNNNGG 1 cut(s) 945
Bse118I RCCGGY 1 cut(s) 797
Bse1I ACTGG 5 cut(s) 274, 413, 784, 975, 991
BseBI CCWGG 1 cut(s) 549
BseDI CCNNGG 4 cut(s) 536, 548, 928, 1120
BseGI GGATG 2 cut(s) 139, 1289
BseLI CCNNNNNNNGG 1 cut(s) 945
BseMII CTCAG 4 cut(s) 342, 600, 801, 1188
BseNI ACTGG 5 cut(s) 274, 413, 784, 975, 991
BseSI GKGCMC 1 cut(s) 1020
BseXI GCAGC 1 cut(s) 778
BsgI GTGCAG 1 cut(s) 281
Bsh1236I CGCG 1 cut(s) 771
BshFI GGCC 6 cut(s) 273, 278, 292, 886, 1119, 1301
BsiSI CCGG 4 cut(s) 174, 274, 798, 1172
BslFI GGGAC 2 cut(s) 320, 334
BslI CCNNNNNNNGG 1 cut(s) 945
BsmAI GTCTC 1 cut(s) 92
BsmFI GGGAC 2 cut(s) 320, 334
BsmI GAATGC 1 cut(s) 1310
BsnI GGCC 6 cut(s) 273, 278, 292, 886, 1119, 1301
Bsp1286I GDGCHC 1 cut(s) 1020
Bsp143I GATC 9 cut(s) 451, 541, 564, 706, 722, 745, 958, 1159, 1356
Bsp19I CCATGG 1 cut(s) 536
BspACI CCGC 3 cut(s) 265, 431, 624
BspANI GGCC 6 cut(s) 273, 278, 292, 886, 1119, 1301
BspCNI CTCAG 4 cut(s) 341, 599, 800, 1189
BspFNI CGCG 1 cut(s) 771
BspHI TCATGA 1 cut(s) 951
BspLI GGNNCC 1 cut(s) 543
BspPI GGATC 4 cut(s) 536, 549, 572, 966
BsrFI RCCGGY 1 cut(s) 797
BsrI ACTGG 5 cut(s) 274, 413, 784, 975, 991
BssAI RCCGGY 1 cut(s) 797
BssECI CCNNGG 4 cut(s) 536, 548, 928, 1120
BssMI GATC 9 cut(s) 451, 541, 564, 706, 722, 745, 958, 1159, 1356
BssSI CACGAG 1 cut(s) 917
BssT1I CCWWGG 2 cut(s) 536, 1120
Bst2BI CACGAG 1 cut(s) 917
Bst2UI CCWGG 1 cut(s) 549
Bst4CI ACNGT 2 cut(s) 1209, 1240
BstBAI YACGTR 2 cut(s) 282, 559
BstC8I GCNNGC 4 cut(s) 601, 613, 1299, 1404
BstDEI CTNAG 7 cut(s) 315, 328, 586, 674, 749, 787, 1197
BstDSI CCRYGG 1 cut(s) 536
BstF5I GGATG 2 cut(s) 139, 1289
BstFNI CGCG 1 cut(s) 771
BstH2I RGCGCY 2 cut(s) 804, 817
BstHHI GCGC 5 cut(s) 637, 771, 803, 816, 1135
BstKTI GATC 9 cut(s) 454, 544, 567, 709, 725, 748, 961, 1162, 1359
BstMAI GTCTC 1 cut(s) 92
BstMBI GATC 9 cut(s) 451, 541, 564, 706, 722, 745, 958, 1159, 1356
BstMWI GCNNNNNNNGC 4 cut(s) 284, 621, 800, 1255
BstNI CCWGG 1 cut(s) 549
BstNSI RCATGY 3 cut(s) 641, 1139, 1330
BstSCI CCNGG 4 cut(s) 172, 273, 547, 1170
BstSFI CTRYAG 1 cut(s) 900
BstSLI GKGCMC 1 cut(s) 1020
BstUI CGCG 1 cut(s) 771
BstV1I GCAGC 1 cut(s) 778
BstV2I GAAGAC 1 cut(s) 705
BstX2I RGATCY 3 cut(s) 541, 722, 1159
BstYI RGATCY 3 cut(s) 541, 722, 1159
BsuRI GGCC 6 cut(s) 273, 278, 292, 886, 1119, 1301
BtgI CCRYGG 1 cut(s) 536
BtrI CACGTC 1 cut(s) 820
BtsCI GGATG 2 cut(s) 139, 1289
BtsIMutI CAGTG 1 cut(s) 267
Cac8I GCNNGC 4 cut(s) 601, 613, 1299, 1404
CciI TCATGA 1 cut(s) 951
CfoI GCGC 5 cut(s) 637, 771, 803, 816, 1135
Cfr10I RCCGGY 1 cut(s) 797
Cfr13I GGNCC 3 cut(s) 276, 925, 1345
CseI GACGC 2 cut(s) 218, 1116
Csp6I GTAC 4 cut(s) 972, 978, 1023, 1210
CspCI CAANNNNNGTGG 2 cut(s) 970, 1005
CviAII CATG 8 cut(s) 537, 638, 831, 952, 1013, 1136, 1327, 1354
CviQI GTAC 4 cut(s) 972, 978, 1023, 1210
DdeI CTNAG 7 cut(s) 315, 328, 586, 674, 749, 787, 1197
DpnI GATC 9 cut(s) 453, 543, 566, 708, 724, 747, 960, 1161, 1358
DpnII GATC 9 cut(s) 451, 541, 564, 706, 722, 745, 958, 1159, 1356
DraIII CACNNNGTG 1 cut(s) 715
EaeI YGGCCR 1 cut(s) 271
Eco130I CCWWGG 2 cut(s) 536, 1120
Eco147I AGGCCT 1 cut(s) 292
Eco47I GGWCC 2 cut(s) 925, 1345
Eco57I CTGAAG 1 cut(s) 1019
EcoRII CCWGG 1 cut(s) 547
EcoT14I CCWWGG 2 cut(s) 536, 1120
EcoT22I ATGCAT 2 cut(s) 1260, 1324
ErhI CCWWGG 2 cut(s) 536, 1120
FaeI CATG 8 cut(s) 540, 641, 834, 955, 1016, 1139, 1330, 1357
FaqI GGGAC 2 cut(s) 320, 334
FatI CATG 8 cut(s) 536, 637, 830, 951, 1012, 1135, 1326, 1353
FauI CCCGC 2 cut(s) 438, 617
FauNDI CATATG 1 cut(s) 941
FbaI TGATCA 2 cut(s) 706, 1356
Fnu4HI GCNGC 1 cut(s) 792
FokI GGATG 2 cut(s) 126, 1296
Fsp4HI GCNGC 1 cut(s) 792
FspBI CTAG 6 cut(s) 1115, 1163, 1367, 1377, 1407, 1417
FspI TGCGCA 1 cut(s) 636
GlaI GCGC 5 cut(s) 636, 770, 802, 815, 1134
GluI GCNGC 1 cut(s) 792
GsuI CTGGAG 2 cut(s) 531, 1418
HaeII RGCGCY 2 cut(s) 804, 817
HaeIII GGCC 6 cut(s) 273, 278, 292, 886, 1119, 1301
HapII CCGG 4 cut(s) 174, 274, 798, 1172
HgaI GACGC 2 cut(s) 218, 1116
HhaI GCGC 5 cut(s) 637, 771, 803, 816, 1135
Hin1II CATG 8 cut(s) 540, 641, 834, 955, 1016, 1139, 1330, 1357
Hin6I GCGC 5 cut(s) 635, 769, 801, 814, 1133
HinP1I GCGC 5 cut(s) 635, 769, 801, 814, 1133
HindIII AAGCTT 1 cut(s) 613
HinfI GANTC 4 cut(s) 437, 783, 854, 1199
HpaII CCGG 4 cut(s) 174, 274, 798, 1172
HphI GGTGA 2 cut(s) 218, 398
Hpy166II GTNNAC 3 cut(s) 418, 492, 1025
Hpy188I TCNGA 8 cut(s) 10, 331, 451, 458, 859, 963, 1038, 1204
Hpy188III TCNNGA 5 cut(s) 91, 228, 952, 1183, 1367
Hpy8I GTNNAC 3 cut(s) 418, 492, 1025
Hpy99I CGWCG 1 cut(s) 1132
HpyAV CCTTC 7 cut(s) 63, 131, 160, 228, 622, 865, 1177
HpyCH4III ACNGT 2 cut(s) 1209, 1240
HpyCH4IV ACGT 3 cut(s) 281, 558, 819
HpyCH4V TGCA 6 cut(s) 287, 298, 599, 1258, 1273, 1322
HpyF10VI GCNNNNNNNGC 4 cut(s) 284, 621, 800, 1255
HpyF3I CTNAG 7 cut(s) 315, 328, 586, 674, 749, 787, 1197
HpySE526I ACGT 3 cut(s) 281, 558, 819
Hsp92II CATG 8 cut(s) 540, 641, 834, 955, 1016, 1139, 1330, 1357
HspAI GCGC 5 cut(s) 635, 769, 801, 814, 1133
Ksp22I TGATCA 2 cut(s) 706, 1356
Kzo9I GATC 9 cut(s) 451, 541, 564, 706, 722, 745, 958, 1159, 1356
LmnI GCTCC 3 cut(s) 992, 1124, 1399
Lsp1109I GCAGC 1 cut(s) 778
LweI GCATC 1 cut(s) 1267
MaeI CTAG 6 cut(s) 1115, 1163, 1367, 1377, 1407, 1417
MaeII ACGT 3 cut(s) 281, 558, 819
MaeIII GTNAC 7 cut(s) 206, 250, 552, 592, 772, 907, 1234
MalI GATC 9 cut(s) 453, 543, 566, 708, 724, 747, 960, 1161, 1358
MboI GATC 9 cut(s) 451, 541, 564, 706, 722, 745, 958, 1159, 1356
MboII GAAGA 5 cut(s) 213, 710, 717, 732, 1025
MfeI CAATTG 2 cut(s) 112, 357
MflI RGATCY 3 cut(s) 541, 722, 1159
MhlI GDGCHC 1 cut(s) 1020
MlyI GAGTC 2 cut(s) 431, 1208
MmeI TCCRAC 1 cut(s) 1261
MnlI CCTC 9 cut(s) 197, 303, 484, 555, 595, 688, 876, 938, 1386
Mph1103I ATGCAT 2 cut(s) 1260, 1324
MroXI GAANNNNTTC 2 cut(s) 98, 724
MseI TTAA 3 cut(s) 369, 465, 1154
MspA1I CMGCKG 2 cut(s) 624, 791
MspI CCGG 4 cut(s) 174, 274, 798, 1172
MspR9I CCNGG 4 cut(s) 174, 275, 549, 1172
MunI CAATTG 2 cut(s) 112, 357
Mva1269I GAATGC 1 cut(s) 1310
MvaI CCWGG 1 cut(s) 549
MvnI CGCG 1 cut(s) 771
MwoI GCNNNNNNNGC 4 cut(s) 284, 621, 800, 1255
NciI CCSGG 3 cut(s) 174, 275, 1172
NcoI CCATGG 1 cut(s) 536
NdeI CATATG 1 cut(s) 941
NdeII GATC 9 cut(s) 451, 541, 564, 706, 722, 745, 958, 1159, 1356
NlaIII CATG 8 cut(s) 540, 641, 834, 955, 1016, 1139, 1330, 1357
NlaIV GGNNCC 1 cut(s) 543
NmeAIII GCCGAG 1 cut(s) 909
NmuCI GTSAC 4 cut(s) 206, 250, 552, 1234
NsbI TGCGCA 1 cut(s) 636
NsiI ATGCAT 2 cut(s) 1260, 1324
NspI RCATGY 3 cut(s) 641, 1139, 1330
PagI TCATGA 1 cut(s) 951
PceI AGGCCT 1 cut(s) 292
PcsI WCGNNNNNNNCGW 1 cut(s) 962
PctI GAATGC 1 cut(s) 1310
PdmI GAANNNNTTC 2 cut(s) 98, 724
PfeI GAWTC 2 cut(s) 783, 854
PflMI CCANNNNNTGG 1 cut(s) 945
PfoI TCCNGGA 1 cut(s) 172
PkrI GCNGC 1 cut(s) 793
PleI GAGTC 2 cut(s) 431, 1207
PpsI GAGTC 2 cut(s) 431, 1207
Ppu21I YACGTR 2 cut(s) 282, 559
PsiI TTATAA 1 cut(s) 1143
Psp6I CCWGG 1 cut(s) 547
PspGI CCWGG 1 cut(s) 547
PspN4I GGNNCC 1 cut(s) 543
PspPI GGNCC 3 cut(s) 276, 925, 1345
PsuI RGATCY 3 cut(s) 541, 722, 1159
PvuII CAGCTG 1 cut(s) 791
RsaI GTAC 4 cut(s) 973, 979, 1024, 1211
RsaNI GTAC 4 cut(s) 972, 978, 1023, 1210
SaqAI TTAA 3 cut(s) 369, 465, 1154
SatI GCNGC 1 cut(s) 792
Sau3AI GATC 9 cut(s) 451, 541, 564, 706, 722, 745, 958, 1159, 1356
Sau96I GGNCC 3 cut(s) 276, 925, 1345
SchI GAGTC 2 cut(s) 431, 1208
ScrFI CCNGG 4 cut(s) 174, 275, 549, 1172
SduI GDGCHC 1 cut(s) 1020
SfaNI GCATC 1 cut(s) 1267
SfcI CTRYAG 1 cut(s) 900
SinI GGWCC 2 cut(s) 925, 1345
SseBI AGGCCT 1 cut(s) 292
SsiI CCGC 3 cut(s) 265, 431, 624
SspMI CTAG 6 cut(s) 1115, 1163, 1367, 1377, 1407, 1417
StuI AGGCCT 1 cut(s) 292
StyD4I CCNGG 4 cut(s) 172, 273, 547, 1170
StyI CCWWGG 2 cut(s) 536, 1120
TaaI ACNGT 2 cut(s) 1209, 1240
TaiI ACGT 3 cut(s) 284, 561, 822
TaqI TCGA 2 cut(s) 33, 1261
TfiI GAWTC 2 cut(s) 783, 854
Tru1I TTAA 3 cut(s) 369, 465, 1154
Tru9I TTAA 3 cut(s) 369, 465, 1154
TscAI CASTG 1 cut(s) 274
TseFI GTSAC 4 cut(s) 206, 250, 552, 1234
TseI GCWGC 1 cut(s) 791
Tsp45I GTSAC 4 cut(s) 206, 250, 552, 1234
TspDTI ATGAA 4 cut(s) 91, 819, 940, 1213
TspGWI ACGGA 1 cut(s) 971
TspRI CASTG 1 cut(s) 274
Van91I CCANNNNNTGG 1 cut(s) 945
VpaK11BI GGWCC 2 cut(s) 925, 1345
XapI RAATTY 7 cut(s) 23, 35, 79, 579, 876, 1058, 1187
XbaI TCTAGA 1 cut(s) 1366
XceI RCATGY 3 cut(s) 641, 1139, 1330
XmnI GAANNNNTTC 2 cut(s) 98, 724
XspI CTAG 6 cut(s) 1115, 1163, 1367, 1377, 1407, 1417
Zsp2I ATGCAT 2 cut(s) 1260, 1324
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.