Rroxscaffold_4G00298890

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Forward (+)
18732257 .. 18734202
1946 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00298890.1

Sequence Viewer

Length: 1836 bp
ATGTCTGAAAGCAGAAGCAGCAGTACGCAAGCAATCTGCTTCTGCAATATTTGCTTCCTAATTATTTTCATCAATTTCTTCTCTCACTTTGCTCATCCACTCTCCTTCAATATAAATCAGTTCGACCAGAGTGCAAATGGAGTTGTCTTTGAAGGTGATGCCCAGTTTTCATCGGGAAGGATTGAGCTCAACCCAGGCACTTATTTCGATGTTGGACATGCTATTTATGCAGAGCCTTTGCACCTATGGGACACTGCTACTGGATCACTGGCAGACTTCACTACTCATTTCACTTTCATGGTCGACTATGGTGATGAACGGTGGAAATTCAGCGATGGAATTGCCTTTTACCTTGCTCCTGTTGGCTACGGTATTCCACCCAACTCTGGCAGTGGTGAACTGGGATTATTCAACACCACCACCAATTTTAATGCCAAGATTGTAACCGTAGAGTTCGACTCCTGGGGAAACGAAGACTGGGATCCACATCCACTCCGGCCCCATATTGGGATCAACATCAATGAAATCTCTTCAGTCCAATACGCCGATTGGAATCCCAGTAACGTGACCGGGAAGATTGGTAATGCATGGATAACTTATAACGCTACTGCCAACGACCTTACTGTGTTTTGGACATTCGAGCAAAACACAAATCCCGTTTTTCCAGGCAAATCTACTTCTTCCATTACTTACAATGTTGACTTGCGAAAGGGAAAGAAGAAAAAAATATTCTTGATACTGGCCATTGCCATACCTGGCTTCATTTTGACGCTTGGTGCAGTCATATGTTGGTTGATGGTATTAAGGAATCGGAGAAACAATTACTCCGGCGAAGTCTCTGATCTTGAGAAGCTAGCCTTTCCAAAACGATTTGCTTACCAAGAGTTGTTTGCTGCCACCAACGGGTTTGCAGACGATAGAAGGCTAGGCCAAGGAGGGTCGGGGCATGTATATAAAGGACTCATACAAGACCTCGGAGGCTGCATAGTTGCCGTGAAGAGAATCTTTGCAGAACCTGATCAGCATTATGAGAGAGTCTTCATCAATGAAGTCAAAATCATAAGCCGCTTAATCCATCGAAACCTGGTGCAGTTCATTGGGTGGAGTCATGAGCAAGGGGAATGCTTACTTGTTTATGCATATATGCCAAACAACAGCCTTGACACTCATCTATTTGGCACCAGAACAACCCTGCAATGGCAAAACAGGTACAAGATAGCTTTCGGGTTGGCCTCAGCAATTCACTATCTACATGAAGAAGCAGAGCAATGTGTTCTTCATAGGGATATCAAATCAGCTAACGTACTGTTGGATGATGACTTCAGCACTAAGCTTGGTGATTTTGGTATTGCTAAGCTCGTGGATTCCCGCTTCAGGTCTCAGACAAGAGAGGTGGCAGGGACTTTTGGATACATGGCCCCTGAATATGCTATTGATGGGAAGGCTAGTAAGGAATCTGACATTTTTAGTTTTGGAGTTGTAGCCTTGGAAATTGCTTGCGGAAGGAAGACTTACCAAGACGGTGAATATCACTTGCCACTCTTTAGGTGGGTTTGGCAGTTGTTCCTTGCAGGAAATATTCTGGACGCAGCTGATGAAAGATTAGAAATGAATTATGATCGAAATGAAATGAAATGCTTGTTGATTGTTGGACTATGGTGTACTCACCCCAATAGCAAGGAAAGACCCAAAGCTGGACAGGTGATGGAGGTTATTCAGCATAAAGCACCATTGCCGGAACTTCCATATGACATGCATAATTATCCAGAACTGCCTCAACCTCAATACCAATCTCAAATTGCATCTTCTCAGACGTACGTCCTCAACTTCTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

611

Amino Acids

69.18

Weight (kDa)

5.69

Isoelectric Point (pI)

42.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 34 - 238 2.2e-48 Legume lectin domain
Pkinase PF00069 304 - 570 3.2e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 306 - 507 1.4e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 600
AccB1I GGYRCC 1 cut(s) 1178
AccI GTMKAC 1 cut(s) 303
AciI CCGC 3 cut(s) 1066, 1369, 1500
AclWI GGATC 4 cut(s) 271, 476, 489, 518
AcoI YGGCCR 1 cut(s) 741
AcsI RAATTY 1 cut(s) 326
AcuI CTGAAG 3 cut(s) 516, 1306, 1357
AfaI GTAC 5 cut(s) 25, 1211, 1305, 1663, 1817
AfiI CCNNNNNNNGG 7 cut(s) 386, 506, 507, 903, 1197, 1374, 1694
AgsI TTSAA 3 cut(s) 109, 152, 412
AjnI CCWGG 5 cut(s) 193, 461, 664, 754, 1083
AluBI AGCT 8 cut(s) 187, 853, 1220, 1298, 1333, 1357, 1592, 1694
AluI AGCT 8 cut(s) 187, 853, 1220, 1298, 1333, 1357, 1592, 1694
Alw21I GWGCWC 1 cut(s) 189
Alw26I GTCTC 2 cut(s) 841, 1383
AlwI GGATC 4 cut(s) 271, 476, 489, 518
AlwNI CAGNNNCTG 1 cut(s) 1016
AoxI GGCC 5 cut(s) 497, 741, 928, 1230, 1416
ApeKI GCWGC 4 cut(s) 18, 893, 981, 1589
ApoI RAATTY 1 cut(s) 326
AspS9I GGNCC 2 cut(s) 498, 1417
AsuC2I CCSGG 1 cut(s) 571
AsuHPI GGTGA 7 cut(s) 167, 323, 407, 1349, 1535, 1658, 1714
AsuNHI GCTAGC 1 cut(s) 853
BalI TGGCCA 1 cut(s) 743
BamHI GGATCC 1 cut(s) 481
BanI GGYRCC 1 cut(s) 1178
BanII GRGCYC 1 cut(s) 189
BarI GAAGNNNNNNTAC 2 cut(s) 7, 39
BauI CACGAG 1 cut(s) 1358
BbsI GAAGAC 3 cut(s) 480, 1030, 1514
Bbv12I GWGCWC 1 cut(s) 189
BbvCI CCTCAGC 1 cut(s) 1234
BbvI GCAGC 4 cut(s) 30, 880, 968, 1601
BccI CCATC 5 cut(s) 329, 790, 1083, 1430, 1699
BceAI ACGGC 1 cut(s) 977
BcgI CGANNNNNNTGC 6 cut(s) 113, 147, 187, 221, 323, 357
BciT130I CCWGG 5 cut(s) 195, 463, 666, 756, 1085
BciVI GTATCC 1 cut(s) 1403
BclI TGATCA 1 cut(s) 1018
BcnI CCSGG 1 cut(s) 571
BcoDI GTCTC 2 cut(s) 841, 1383
BfaI CTAG 4 cut(s) 854, 926, 1446, 1834
BfuI GTATCC 1 cut(s) 1403
BisI GCNGC 5 cut(s) 19, 894, 982, 1066, 1590
BlpI GCTNAGC 1 cut(s) 1353
BlsI GCNGC 5 cut(s) 20, 895, 983, 1067, 1591
Bme1390I CCNGG 6 cut(s) 195, 463, 571, 666, 756, 1085
BmgT120I GGNCC 2 cut(s) 498, 1417
BmiI GGNNCC 4 cut(s) 483, 500, 1180, 1419
BmrFI CCNGG 6 cut(s) 195, 463, 571, 666, 756, 1085
BmrI ACTGGG 4 cut(s) 157, 410, 487, 552
BmsI GCATC 2 cut(s) 148, 1811
BmtI GCTAGC 1 cut(s) 857
BmuI ACTGGG 4 cut(s) 157, 410, 487, 552
BoxI GACNNNNGTC 1 cut(s) 1817
BpiI GAAGAC 3 cut(s) 480, 1030, 1514
BplI GAGNNNNNCTC 2 cut(s) 443, 475
Bpu10I CCTNAGC 1 cut(s) 1234
Bpu1102I GCTNAGC 1 cut(s) 1353
BpuEI CTTGAG 1 cut(s) 866
BpuMI CCSGG 1 cut(s) 571
BsaBI GATNNNNATC 3 cut(s) 486, 515, 552
BsaI GGTCTC 1 cut(s) 1383
BsaJI CCNNGG 5 cut(s) 193, 462, 931, 973, 1485
BsaXI ACNNNNNCTCC 4 cut(s) 477, 507, 809, 839
Bsc4I CCNNNNNNNGG 7 cut(s) 386, 506, 507, 903, 1197, 1374, 1694
Bse1I ACTGG 7 cut(s) 163, 265, 273, 405, 482, 558, 744
Bse3DI GCAATG 4 cut(s) 744, 1202, 1274, 1730
Bse8I GATNNNNATC 3 cut(s) 486, 515, 552
BseBI CCWGG 5 cut(s) 195, 463, 666, 756, 1085
BseDI CCNNGG 5 cut(s) 193, 462, 931, 973, 1485
BseGI GGATG 3 cut(s) 94, 487, 1318
BseJI GATNNNNATC 3 cut(s) 486, 515, 552
BseLI CCNNNNNNNGG 7 cut(s) 386, 506, 507, 903, 1197, 1374, 1694
BseMI GCAATG 4 cut(s) 744, 1202, 1274, 1730
BseMII CTCAG 3 cut(s) 1248, 1394, 1823
BseNI ACTGG 7 cut(s) 163, 265, 273, 405, 482, 558, 744
BseXI GCAGC 4 cut(s) 30, 880, 968, 1601
BsgI GTGCAG 2 cut(s) 798, 1109
BshFI GGCC 5 cut(s) 499, 743, 930, 1232, 1418
BshNI GGYRCC 1 cut(s) 1178
BsiHKAI GWGCWC 1 cut(s) 189
BsiSI CCGG 4 cut(s) 496, 570, 828, 1736
BsiWI CGTACG 1 cut(s) 1815
BslFI GGGAC 2 cut(s) 263, 1414
BslI CCNNNNNNNGG 7 cut(s) 386, 506, 507, 903, 1197, 1374, 1694
BsmAI GTCTC 2 cut(s) 841, 1383
BsmFI GGGAC 2 cut(s) 263, 1414
BsmI GAATGC 1 cut(s) 1127
BsnI GGCC 5 cut(s) 499, 743, 930, 1232, 1418
Bso31I GGTCTC 1 cut(s) 1383
Bsp1286I GDGCHC 1 cut(s) 189
Bsp143I GATC 6 cut(s) 263, 481, 510, 841, 1018, 1618
Bsp1720I GCTNAGC 1 cut(s) 1353
BspACI CCGC 3 cut(s) 1066, 1369, 1500
BspANI GGCC 5 cut(s) 499, 743, 930, 1232, 1418
BspCNI CTCAG 3 cut(s) 1247, 1393, 1822
BspHI TCATGA 1 cut(s) 1108
BspLI GGNNCC 4 cut(s) 483, 500, 1180, 1419
BspOI GCTAGC 1 cut(s) 857
BspPI GGATC 4 cut(s) 271, 476, 489, 518
BspT107I GGYRCC 1 cut(s) 1178
BspTNI GGTCTC 1 cut(s) 1383
BsrDI GCAATG 4 cut(s) 744, 1202, 1274, 1730
BsrI ACTGG 7 cut(s) 163, 265, 273, 405, 482, 558, 744
BssECI CCNNGG 5 cut(s) 193, 462, 931, 973, 1485
BssMI GATC 6 cut(s) 263, 481, 510, 841, 1018, 1618
BssSI CACGAG 1 cut(s) 1358
BssT1I CCWWGG 2 cut(s) 931, 1485
Bst2BI CACGAG 1 cut(s) 1358
Bst2UI CCWGG 5 cut(s) 195, 463, 666, 756, 1085
Bst4CI ACNGT 6 cut(s) 321, 371, 448, 625, 1308, 1523
Bst6I CTCTTC 2 cut(s) 535, 992
BstAPI GCANNNNNTGC 1 cut(s) 51
BstC8I GCNNGC 3 cut(s) 30, 855, 1498
BstDEI CTNAG 5 cut(s) 1234, 1329, 1353, 1380, 1809
BstF5I GGATG 3 cut(s) 94, 487, 1318
BstKTI GATC 6 cut(s) 266, 484, 513, 844, 1021, 1621
BstMAI GTCTC 2 cut(s) 841, 1383
BstMBI GATC 6 cut(s) 263, 481, 510, 841, 1018, 1618
BstMWI GCNNNNNNNGC 3 cut(s) 18, 51, 227
BstNI CCWGG 5 cut(s) 195, 463, 666, 756, 1085
BstNSI RCATGY 3 cut(s) 221, 950, 1756
BstPAI GACNNNNGTC 1 cut(s) 1817
BstSCI CCNGG 6 cut(s) 193, 461, 569, 664, 754, 1083
BstV1I GCAGC 4 cut(s) 30, 880, 968, 1601
BstV2I GAAGAC 3 cut(s) 480, 1030, 1514
BstX2I RGATCY 1 cut(s) 481
BstYI RGATCY 1 cut(s) 481
BsuI GTATCC 1 cut(s) 1403
BsuRI GGCC 5 cut(s) 499, 743, 930, 1232, 1418
BtgZI GCGATG 1 cut(s) 348
BtsCI GGATG 3 cut(s) 94, 487, 1318
BtsI GCAGTG 2 cut(s) 252, 397
BtsIMutI CAGTG 3 cut(s) 252, 266, 397
Cac8I GCNNGC 3 cut(s) 30, 855, 1498
CaiI CAGNNNCTG 1 cut(s) 1016
CciI TCATGA 1 cut(s) 1108
Cfr13I GGNCC 2 cut(s) 498, 1417
CseI GACGC 2 cut(s) 778, 1595
CsiI ACCWGGT 1 cut(s) 1083
Csp6I GTAC 5 cut(s) 24, 1210, 1304, 1662, 1816
CspCI CAANNNNNGTGG 2 cut(s) 1374, 1409
CviAII CATG 8 cut(s) 218, 298, 588, 947, 1109, 1253, 1414, 1753
CviQI GTAC 5 cut(s) 24, 1210, 1304, 1662, 1816
DdeI CTNAG 5 cut(s) 1234, 1329, 1353, 1380, 1809
DpnI GATC 6 cut(s) 265, 483, 512, 843, 1020, 1620
DpnII GATC 6 cut(s) 263, 481, 510, 841, 1018, 1618
EaeI YGGCCR 1 cut(s) 741
Eam1104I CTCTTC 2 cut(s) 535, 992
EarI CTCTTC 2 cut(s) 535, 992
Ecl136II GAGCTC 1 cut(s) 187
Eco130I CCWWGG 2 cut(s) 931, 1485
Eco24I GRGCYC 1 cut(s) 189
Eco31I GGTCTC 1 cut(s) 1383
Eco32I GATATC 1 cut(s) 1288
Eco53kI GAGCTC 1 cut(s) 187
Eco57I CTGAAG 3 cut(s) 516, 1306, 1357
EcoICRI GAGCTC 1 cut(s) 187
EcoRII CCWGG 5 cut(s) 193, 461, 664, 754, 1083
EcoRV GATATC 1 cut(s) 1288
EcoT14I CCWWGG 2 cut(s) 931, 1485
EcoT22I ATGCAT 3 cut(s) 589, 1141, 1758
EcoT38I GRGCYC 1 cut(s) 189
ErhI CCWWGG 2 cut(s) 931, 1485
FaeI CATG 8 cut(s) 221, 301, 591, 950, 1112, 1256, 1417, 1756
FalI AAGNNNNNCTT 6 cut(s) 842, 874, 989, 1021, 1495, 1527
FaqI GGGAC 2 cut(s) 263, 1414
FatI CATG 8 cut(s) 217, 297, 587, 946, 1108, 1252, 1413, 1752
FauI CCCGC 1 cut(s) 1376
FauNDI CATATG 2 cut(s) 785, 1747
FbaI TGATCA 1 cut(s) 1018
FblI GTMKAC 1 cut(s) 303
Fnu4HI GCNGC 5 cut(s) 19, 894, 982, 1066, 1590
FokI GGATG 3 cut(s) 81, 474, 1325
FriOI GRGCYC 1 cut(s) 189
Fsp4HI GCNGC 5 cut(s) 19, 894, 982, 1066, 1590
FspBI CTAG 4 cut(s) 854, 926, 1446, 1834
GluI GCNGC 5 cut(s) 19, 894, 982, 1066, 1590
HaeIII GGCC 5 cut(s) 499, 743, 930, 1232, 1418
HapII CCGG 4 cut(s) 496, 570, 828, 1736
HgaI GACGC 2 cut(s) 778, 1595
Hin1II CATG 8 cut(s) 221, 301, 591, 950, 1112, 1256, 1417, 1756
HincII GTYRAC 2 cut(s) 304, 700
HindII GTYRAC 2 cut(s) 304, 700
HindIII AAGCTT 1 cut(s) 1331
HinfI GANTC 9 cut(s) 458, 553, 808, 960, 1002, 1035, 1105, 1364, 1454
HpaII CCGG 4 cut(s) 496, 570, 828, 1736
HphI GGTGA 7 cut(s) 167, 323, 407, 1349, 1535, 1658, 1714
Hpy166II GTNNAC 4 cut(s) 304, 398, 700, 1662
Hpy188I TCNGA 7 cut(s) 7, 813, 841, 977, 1383, 1459, 1812
Hpy188III TCNNGA 6 cut(s) 174, 733, 845, 1109, 1583, 1766
Hpy8I GTNNAC 4 cut(s) 304, 398, 700, 1662
HpyAV CCTTC 6 cut(s) 115, 146, 171, 915, 1435, 1497
HpyCH4III ACNGT 6 cut(s) 321, 371, 448, 625, 1308, 1523
HpyCH4IV ACGT 4 cut(s) 564, 1302, 1814, 1818
HpyF10VI GCNNNNNNNGC 3 cut(s) 18, 51, 227
HpyF3I CTNAG 5 cut(s) 1234, 1329, 1353, 1380, 1809
HpySE526I ACGT 4 cut(s) 564, 1302, 1814, 1818
Hsp92II CATG 8 cut(s) 221, 301, 591, 950, 1112, 1256, 1417, 1756
Ksp22I TGATCA 1 cut(s) 1018
Kzo9I GATC 6 cut(s) 263, 481, 510, 841, 1018, 1618
LmnI GCTCC 1 cut(s) 361
Lsp1109I GCAGC 4 cut(s) 30, 880, 968, 1601
LweI GCATC 2 cut(s) 148, 1811
MabI ACCWGGT 1 cut(s) 1083
MaeI CTAG 4 cut(s) 854, 926, 1446, 1834
MaeII ACGT 4 cut(s) 564, 1302, 1814, 1818
MaeIII GTNAC 3 cut(s) 442, 560, 565
MalI GATC 6 cut(s) 265, 483, 512, 843, 1020, 1620
MboI GATC 6 cut(s) 263, 481, 510, 841, 1018, 1618
MflI RGATCY 1 cut(s) 481
MhlI GDGCHC 1 cut(s) 189
MlsI TGGCCA 1 cut(s) 743
MluNI TGGCCA 1 cut(s) 743
MlyI GAGTC 4 cut(s) 452, 954, 1044, 1114
MmeI TCCRAC 3 cut(s) 193, 1290, 1630
MnlI CCTC 9 cut(s) 929, 971, 983, 1243, 1384, 1702, 1785, 1791, 1832
Mox20I TGGCCA 1 cut(s) 743
Mph1103I ATGCAT 3 cut(s) 589, 1141, 1758
MscI TGGCCA 1 cut(s) 743
MseI TTAA 3 cut(s) 429, 803, 1070
MslI CAYNNNNRTG 1 cut(s) 296
Msp20I TGGCCA 1 cut(s) 743
MspA1I CMGCKG 1 cut(s) 1592
MspI CCGG 4 cut(s) 496, 570, 828, 1736
MspR9I CCNGG 6 cut(s) 195, 463, 571, 666, 756, 1085
Mva1269I GAATGC 1 cut(s) 1127
MvaI CCWGG 5 cut(s) 195, 463, 666, 756, 1085
MwoI GCNNNNNNNGC 3 cut(s) 18, 51, 227
NciI CCSGG 1 cut(s) 571
NdeI CATATG 2 cut(s) 785, 1747
NdeII GATC 6 cut(s) 263, 481, 510, 841, 1018, 1618
NheI GCTAGC 1 cut(s) 853
NlaIII CATG 8 cut(s) 221, 301, 591, 950, 1112, 1256, 1417, 1756
NlaIV GGNNCC 4 cut(s) 483, 500, 1180, 1419
NmuCI GTSAC 1 cut(s) 565
NsiI ATGCAT 3 cut(s) 589, 1141, 1758
NspI RCATGY 3 cut(s) 221, 950, 1756
PagI TCATGA 1 cut(s) 1108
PctI GAATGC 1 cut(s) 1127
PfeI GAWTC 5 cut(s) 553, 808, 1002, 1364, 1454
Pfl23II CGTACG 1 cut(s) 1815
PkrI GCNGC 5 cut(s) 20, 895, 983, 1067, 1591
PleI GAGTC 4 cut(s) 452, 954, 1043, 1113
PpsI GAGTC 4 cut(s) 452, 954, 1043, 1113
PshAI GACNNNNGTC 1 cut(s) 1817
PsiI TTATAA 1 cut(s) 600
Psp124BI GAGCTC 1 cut(s) 189
Psp6I CCWGG 5 cut(s) 193, 461, 664, 754, 1083
PspGI CCWGG 5 cut(s) 193, 461, 664, 754, 1083
PspLI CGTACG 1 cut(s) 1815
PspN4I GGNNCC 4 cut(s) 483, 500, 1180, 1419
PspPI GGNCC 2 cut(s) 498, 1417
PstNI CAGNNNCTG 1 cut(s) 1016
PsuI RGATCY 1 cut(s) 481
PvuII CAGCTG 1 cut(s) 1592
RsaI GTAC 5 cut(s) 25, 1211, 1305, 1663, 1817
RsaNI GTAC 5 cut(s) 24, 1210, 1304, 1662, 1816
RseI CAYNNNNRTG 1 cut(s) 296
SacI GAGCTC 1 cut(s) 189
SalI GTCGAC 1 cut(s) 302
SaqAI TTAA 3 cut(s) 429, 803, 1070
SatI GCNGC 5 cut(s) 19, 894, 982, 1066, 1590
Sau3AI GATC 6 cut(s) 263, 481, 510, 841, 1018, 1618
Sau96I GGNCC 2 cut(s) 498, 1417
SchI GAGTC 4 cut(s) 452, 954, 1044, 1114
ScrFI CCNGG 6 cut(s) 195, 463, 571, 666, 756, 1085
SduI GDGCHC 1 cut(s) 189
SexAI ACCWGGT 1 cut(s) 1083
SfaNI GCATC 2 cut(s) 148, 1811
SmiMI CAYNNNNRTG 1 cut(s) 296
SmlI CTYRAG 1 cut(s) 845
SmoI CTYRAG 1 cut(s) 845
SsiI CCGC 3 cut(s) 1066, 1369, 1500
SspI AATATT 3 cut(s) 49, 729, 1579
SspMI CTAG 4 cut(s) 854, 926, 1446, 1834
SstI GAGCTC 1 cut(s) 189
StyD4I CCNGG 6 cut(s) 193, 461, 569, 664, 754, 1083
StyI CCWWGG 2 cut(s) 931, 1485
TaaI ACNGT 6 cut(s) 321, 371, 448, 625, 1308, 1523
TaiI ACGT 4 cut(s) 567, 1305, 1817, 1821
TaqI TCGA 7 cut(s) 123, 207, 303, 456, 639, 1078, 1621
TatI WGTACW 1 cut(s) 1661
TauI GCSGC 1 cut(s) 1068
TfiI GAWTC 5 cut(s) 553, 808, 1002, 1364, 1454
Tru1I TTAA 3 cut(s) 429, 803, 1070
Tru9I TTAA 3 cut(s) 429, 803, 1070
TscAI CASTG 3 cut(s) 259, 273, 397
TseFI GTSAC 1 cut(s) 565
TseI GCWGC 4 cut(s) 18, 893, 981, 1589
Tsp45I GTSAC 1 cut(s) 565
TspRI CASTG 3 cut(s) 259, 273, 397
XapI RAATTY 1 cut(s) 326
XceI RCATGY 3 cut(s) 221, 950, 1756
XcmI CCANNNNNNNNNTGG 2 cut(s) 134, 1545
XmiI GTMKAC 1 cut(s) 303
XspI CTAG 4 cut(s) 854, 926, 1446, 1834
Zsp2I ATGCAT 3 cut(s) 589, 1141, 1758
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.