MD15G1307500.v1.1

Belongs to the leguminous lectin family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
30683776 .. 30685848
2073 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1307500.v1.1.491

Sequence Viewer

Length: 2073 bp
ATGGCTCTCTTCAAACAAATTTCACACCTCCAAACACAAACTTTTCCCTGTCTTCTCTTCCACTTCTTTCTCTTCCTCTTACTACTCGAAAATGTCAACTCGTTCTCCTTCAACATCTCCAGTTTTGATACAAACACAAAGGATATCACCTACCAAGGTGATGCTTTCCCATCAAGAGGAGTCATTCAGCTCACAAAGAATCAAGTTGATGGTCCGCTAACTGAAAGCGCTGGCCGTGCCTTGTTCGCTCAACCCGTGCGTCTTTATGATGCCAGCAAGGGGAGGCTCACCGACTTCACAACCCATTTCACCTTTGTCATGAATGCCTTGAATGATACACGCTATGGTGATGGCATATCTTTCTTCCTTGCACCATTGGATTCGAAAATCCCAGAAAATTCAACTGGGGGATACCTTGCTCTATTTAGCTCCAATTCCAACTTCAACTCAACCAAGAATCAAATTGTTGCTGTGGAGTTTGACAGTTTTAAAAACAGTTGGGATCCAAGTCCTGATCATGTAGGAATCAATGTCAACTCCATTGTCTCAGTAGCCAACATTTCGTGGAAAACTACCATAAAAAATGGATCAGTAGCAAATGCATGGGTAAGTTATAACTCCACCTCCCAAAATTTAAGTGTTTTTCTAACGTATTCTAAGAATCCAGAGTTCAGCGCTGGAGATTGTAGTGTTTCGTACATAATTGATTTGAGGAAGGTGTTGCCGGAGCTGGTAAGTGTCGGTTTCTCTGCAGCCACGGGTGCATGGGTGGAAATACACAACATTCTGTCTTGGTCATTTAGTTCCACCCTGGATATCAGTAGTAATAATGAAGCAGAAAGAAAAATAAGAATTGGGGTTGGTTTAGGGGCAGGTTTCGGTCTTTTGAGTTGTGGATTAGGTCTCTTTTGGTTCATCTCTTGGAGAAAAAGGGCTAAGAAGATAAATGAGGCATATGATATATCTATGGATGATGAATTTGACAAGGGAACTGGGCCGCGGAGGTTTACTTACCGTGAACTAAATCACGCAACAAACAACTTCGCTGAGGGAGGCAAGCTTGGAGAGGGAGGATTTGGAGGAGTCTACAAGGGTTTGCTAACTGAGTCAAAAACAGAAGTGGCTGTGAAGAGAGTATCTAGGGGATCAAAGCAAGGGAAAAAGGAGTACATAGCGGAAGTGAGGATCATCAGTCGGTTGAGGCACAGAAACTTGGTGCAGCTCATCGGTTGGTGTCATGAACAAGGTGAGTTCCTTCTGGTCTACGAAATTATGCCGAATGGAAGCCTTGATTCCCATCTGTTTGGAATGAAGCTCCATCTAACTTGGACAGTAAGGCACAAAATAGCCCTTGGCTTAGCATCGGCAATTCTGTATCTTCACGAGGAGTGGGAACAATGTGTTGTGCATAGAGATATTAAGTCAAGTAATGTGATGTTGGATTCCAATTTCAATGCCAAGCTTGGAGATTTTGGGCTTGCAAGGCTTGTAGACCATGGTTTGGGGTCACAAACAACTGTATTAGCAGGCACCATGGGGTATCTAGCCCCAGAATGTGTGACAGATGGAAGGGCTAGTAAAGAATCCGATGTCTACAGTTTCGGGGTAGTTTCCCTAGAAATTAGCTGTGGAAGAAGGCCGGTCGAAGCAAAGGCAGAACCAAGTAGGGTAAGGCTGGTGGAGTGGGTTTGGGATTTGTATGGAAAAGACCAAATACTTGAAGCTGTTGATGAAAGATTGAATAAGGAATTTGATGAGCAACAAATTGAGTGCTTGATGACAGTAGGGTTATGGTGTTGCCATCCTGATCCTACCGTTAGGCCTTCTATTAGGCAAGTGATTAATGTTCTCAATTTCGAAGCCCCCATGCCAAGCCTGCCTTCAAGGTTGCCAGTGCCAACGTACTTTGCACCTGCATTGAGTATGTGTAGGTTCTCCTATACGTCTAACCTCACCGGATCATCAGTAAAAGATCGAACTCAGTGTTCATGTAGCAGTTGCACTACCTATAATTCATCACAGTCAGCCGGCTCTTCGAAAGCTCTACTGAATTCGCGCACAACCGCTGTGTAG

Protein Analysis

691

Amino Acids

76.54

Weight (kDa)

6.94

Isoelectric Point (pI)

35.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 35 - 279 1.4e-70 Legume lectin domain
Pkinase PF00069 349 - 615 6.2e-50 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 352 - 616 2.9e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 615
AarI CACCTGC 1 cut(s) 1921
Acc36I ACCTGC 2 cut(s) 863, 1921
AccB1I GGYRCC 1 cut(s) 1529
AccB7I CCANNNNNTGG 1 cut(s) 1501
AccI GTMKAC 4 cut(s) 1086, 1263, 1491, 1593
AccII CGCG 2 cut(s) 1000, 2056
AciI CCGC 5 cut(s) 215, 998, 1000, 1175, 2064
AclWI GGATC 7 cut(s) 497, 510, 595, 1153, 1193, 1802, 1966
AcoI YGGCCR 1 cut(s) 232
AcsI RAATTY 6 cut(s) 18, 397, 631, 977, 1748, 2050
AfaI GTAC 3 cut(s) 698, 1169, 1904
AfeI AGCGCT 2 cut(s) 229, 676
AfiI CCNNNNNNNGG 3 cut(s) 176, 279, 1501
AgsI TTSAA 9 cut(s) 13, 112, 331, 402, 445, 1453, 1721, 1741, 1884
AjnI CCWGG 1 cut(s) 810
AjuI GAANNNNNNNTTGG 4 cut(s) 425, 457, 1864, 1896
Alw26I GTCTC 2 cut(s) 550, 908
AlwI GGATC 7 cut(s) 497, 510, 595, 1153, 1193, 1802, 1966
Aor51HI AGCGCT 2 cut(s) 229, 676
AoxI GGCC 4 cut(s) 232, 995, 1637, 1820
ApeKI GCWGC 2 cut(s) 752, 1219
ApoI RAATTY 6 cut(s) 18, 397, 631, 977, 1748, 2050
AseI ATTAAT 1 cut(s) 1842
AspLEI GCGC 3 cut(s) 230, 677, 2058
AspS9I GGNCC 2 cut(s) 212, 995
AsuHPI GGTGA 7 cut(s) 139, 170, 280, 301, 359, 1259, 1945
AsuII TTCGAA 3 cut(s) 383, 1857, 2036
AvaII GGWCC 1 cut(s) 212
BamHI GGATCC 1 cut(s) 502
BanI GGYRCC 1 cut(s) 1529
BauI CACGAG 1 cut(s) 1382
BbsI GAAGAC 1 cut(s) 44
BbvCI CCTCAGC 1 cut(s) 1047
BbvI GCAGC 2 cut(s) 764, 1231
BccI CCATC 7 cut(s) 178, 203, 344, 1305, 1326, 1559, 1809
BceAI ACGGC 1 cut(s) 219
BciT130I CCWGG 1 cut(s) 812
BciVI GTATCC 1 cut(s) 404
BclI TGATCA 1 cut(s) 514
BcoDI GTCTC 2 cut(s) 550, 908
BfaI CTAG 4 cut(s) 1140, 1544, 1575, 1616
BfmI CTRYAG 2 cut(s) 750, 1594
BfoI RGCGCY 2 cut(s) 231, 678
BfuAI ACCTGC 2 cut(s) 863, 1921
BfuI GTATCC 1 cut(s) 404
BisI GCNGC 3 cut(s) 753, 998, 1220
BlpI GCTNAGC 1 cut(s) 1357
BlsI GCNGC 3 cut(s) 754, 999, 1221
Bme1390I CCNGG 1 cut(s) 812
Bme18I GGWCC 1 cut(s) 212
BmgT120I GGNCC 2 cut(s) 212, 995
BmiI GGNNCC 2 cut(s) 504, 1531
BmrFI CCNGG 1 cut(s) 812
BmrI ACTGGG 2 cut(s) 414, 1002
BmsI GCATC 3 cut(s) 151, 259, 1370
BmuI ACTGGG 2 cut(s) 414, 1002
BpiI GAAGAC 1 cut(s) 44
BpmI CTGGAG 2 cut(s) 103, 699
Bpu10I CCTNAGC 1 cut(s) 1047
Bpu1102I GCTNAGC 1 cut(s) 1357
Bpu14I TTCGAA 3 cut(s) 383, 1857, 2036
BsaBI GATNNNNATC 1 cut(s) 1296
BsaI GGTCTC 1 cut(s) 908
BsaJI CCNNGG 7 cut(s) 154, 756, 810, 998, 1351, 1495, 1533
BsaWI WCCGGW 1 cut(s) 1955
BsaXI ACNNNNNCTCC 4 cut(s) 89, 119, 608, 638
Bsc4I CCNNNNNNNGG 3 cut(s) 176, 279, 1501
Bse118I RCCGGY 2 cut(s) 1639, 2027
Bse1I ACTGG 4 cut(s) 120, 409, 997, 1892
Bse8I GATNNNNATC 1 cut(s) 1296
BseBI CCWGG 1 cut(s) 812
BseDI CCNNGG 7 cut(s) 154, 756, 810, 998, 1351, 1495, 1533
BseGI GGATG 2 cut(s) 976, 1801
BseJI GATNNNNATC 1 cut(s) 1296
BseLI CCNNNNNNNGG 3 cut(s) 176, 279, 1501
BseMII CTCAG 4 cut(s) 561, 1038, 1095, 1994
BseNI ACTGG 4 cut(s) 120, 409, 997, 1892
BseRI GAGGAG 3 cut(s) 192, 1095, 1400
BseXI GCAGC 2 cut(s) 764, 1231
BsgI GTGCAG 1 cut(s) 1238
Bsh1236I CGCG 2 cut(s) 1000, 2056
Bsh1285I CGRYCG 1 cut(s) 1644
BshFI GGCC 4 cut(s) 234, 997, 1639, 1822
BshNI GGYRCC 1 cut(s) 1529
BsiEI CGRYCG 1 cut(s) 1644
BsiSI CCGG 4 cut(s) 725, 1640, 1956, 2028
BslI CCNNNNNNNGG 3 cut(s) 176, 279, 1501
BsmAI GTCTC 2 cut(s) 550, 908
BsmI GAATGC 1 cut(s) 328
BsnI GGCC 4 cut(s) 234, 997, 1639, 1822
Bso31I GGTCTC 1 cut(s) 908
Bsp119I TTCGAA 3 cut(s) 383, 1857, 2036
Bsp143I GATC 8 cut(s) 502, 514, 587, 1145, 1185, 1807, 1958, 1972
Bsp1720I GCTNAGC 1 cut(s) 1357
Bsp19I CCATGG 2 cut(s) 1495, 1533
BspACI CCGC 5 cut(s) 215, 998, 1000, 1175, 2064
BspANI GGCC 4 cut(s) 234, 997, 1639, 1822
BspCNI CTCAG 4 cut(s) 560, 1039, 1096, 1993
BspFNI CGCG 2 cut(s) 1000, 2056
BspHI TCATGA 2 cut(s) 318, 1237
BspLI GGNNCC 2 cut(s) 504, 1531
BspMAI CTGCAG 1 cut(s) 754
BspMI ACCTGC 2 cut(s) 863, 1921
BspPI GGATC 7 cut(s) 497, 510, 595, 1153, 1193, 1802, 1966
BspQI GCTCTTC 1 cut(s) 2038
BspT104I TTCGAA 3 cut(s) 383, 1857, 2036
BspT107I GGYRCC 1 cut(s) 1529
BspTNI GGTCTC 1 cut(s) 908
BsrFI RCCGGY 2 cut(s) 1639, 2027
BsrI ACTGG 4 cut(s) 120, 409, 997, 1892
BssAI RCCGGY 2 cut(s) 1639, 2027
BssECI CCNNGG 7 cut(s) 154, 756, 810, 998, 1351, 1495, 1533
BssMI GATC 8 cut(s) 502, 514, 587, 1145, 1185, 1807, 1958, 1972
BssSI CACGAG 1 cut(s) 1382
BssT1I CCWWGG 4 cut(s) 154, 1351, 1495, 1533
Bst2BI CACGAG 1 cut(s) 1382
Bst2UI CCWGG 1 cut(s) 812
Bst4CI ACNGT 9 cut(s) 485, 497, 1016, 1333, 1519, 1598, 1783, 1816, 2022
Bst6I CTCTTC 5 cut(s) 14, 62, 77, 1124, 2038
BstBI TTCGAA 3 cut(s) 383, 1857, 2036
BstC8I GCNNGC 7 cut(s) 232, 274, 1058, 1479, 1528, 1877, 2029
BstDEI CTNAG 7 cut(s) 547, 657, 936, 1047, 1104, 1357, 1980
BstDSI CCRYGG 4 cut(s) 756, 998, 1495, 1533
BstF5I GGATG 2 cut(s) 976, 1801
BstFNI CGCG 2 cut(s) 1000, 2056
BstH2I RGCGCY 2 cut(s) 231, 678
BstHHI GCGC 3 cut(s) 230, 677, 2058
BstKTI GATC 8 cut(s) 505, 517, 590, 1148, 1188, 1810, 1961, 1975
BstMAI GTCTC 2 cut(s) 550, 908
BstMBI GATC 8 cut(s) 502, 514, 587, 1145, 1185, 1807, 1958, 1972
BstMCI CGRYCG 1 cut(s) 1644
BstMWI GCNNNNNNNGC 5 cut(s) 236, 245, 761, 1483, 1876
BstNI CCWGG 1 cut(s) 812
BstSCI CCNGG 1 cut(s) 810
BstSFI CTRYAG 2 cut(s) 750, 1594
BstUI CGCG 2 cut(s) 1000, 2056
BstV1I GCAGC 2 cut(s) 764, 1231
BstV2I GAAGAC 1 cut(s) 44
BstX2I RGATCY 1 cut(s) 502
BstXI CCANNNNNNTGG 1 cut(s) 1304
BstYI RGATCY 1 cut(s) 502
BsuI GTATCC 1 cut(s) 404
BsuRI GGCC 4 cut(s) 234, 997, 1639, 1822
BtgI CCRYGG 4 cut(s) 756, 998, 1495, 1533
BtsCI GGATG 2 cut(s) 976, 1801
BtsIMutI CAGTG 2 cut(s) 1899, 1988
BveI ACCTGC 2 cut(s) 863, 1921
Cac8I GCNNGC 7 cut(s) 232, 274, 1058, 1479, 1528, 1877, 2029
CciI TCATGA 2 cut(s) 318, 1237
CfoI GCGC 3 cut(s) 230, 677, 2058
Cfr10I RCCGGY 2 cut(s) 1639, 2027
Cfr13I GGNCC 2 cut(s) 212, 995
Cfr42I CCGCGG 1 cut(s) 1001
CseI GACGC 1 cut(s) 248
Csp6I GTAC 3 cut(s) 697, 1168, 1903
CviAII CATG 9 cut(s) 319, 518, 603, 765, 1238, 1496, 1534, 1867, 1989
CviQI GTAC 3 cut(s) 697, 1168, 1903
DdeI CTNAG 7 cut(s) 547, 657, 936, 1047, 1104, 1357, 1980
DpnI GATC 8 cut(s) 504, 516, 589, 1147, 1187, 1809, 1960, 1974
DpnII GATC 8 cut(s) 502, 514, 587, 1145, 1185, 1807, 1958, 1972
DraI TTTAAA 1 cut(s) 490
EaeI YGGCCR 1 cut(s) 232
Eam1104I CTCTTC 5 cut(s) 14, 62, 77, 1124, 2038
EarI CTCTTC 5 cut(s) 14, 62, 77, 1124, 2038
Eco130I CCWWGG 4 cut(s) 154, 1351, 1495, 1533
Eco147I AGGCCT 1 cut(s) 1822
Eco31I GGTCTC 1 cut(s) 908
Eco32I GATATC 2 cut(s) 145, 817
Eco47I GGWCC 1 cut(s) 212
Eco47III AGCGCT 2 cut(s) 229, 676
EcoRI GAATTC 1 cut(s) 2050
EcoRII CCWGG 1 cut(s) 810
EcoRV GATATC 2 cut(s) 145, 817
EcoT14I CCWWGG 4 cut(s) 154, 1351, 1495, 1533
EcoT22I ATGCAT 1 cut(s) 604
ErhI CCWWGG 4 cut(s) 154, 1351, 1495, 1533
FaeI CATG 9 cut(s) 322, 521, 606, 768, 1241, 1499, 1537, 1870, 1992
FalI AAGNNNNNCTT 2 cut(s) 1864, 1896
FatI CATG 9 cut(s) 318, 517, 602, 764, 1237, 1495, 1533, 1866, 1988
FauNDI CATATG 1 cut(s) 955
FbaI TGATCA 1 cut(s) 514
FblI GTMKAC 4 cut(s) 1086, 1263, 1491, 1593
Fnu4HI GCNGC 3 cut(s) 753, 998, 1220
FokI GGATG 2 cut(s) 983, 1788
Fsp4HI GCNGC 3 cut(s) 753, 998, 1220
FspBI CTAG 4 cut(s) 1140, 1544, 1575, 1616
GlaI GCGC 3 cut(s) 229, 676, 2057
GluI GCNGC 3 cut(s) 753, 998, 1220
GsuI CTGGAG 2 cut(s) 103, 699
HaeII RGCGCY 2 cut(s) 231, 678
HaeIII GGCC 4 cut(s) 234, 997, 1639, 1822
HapII CCGG 4 cut(s) 725, 1640, 1956, 2028
HgaI GACGC 1 cut(s) 248
HhaI GCGC 3 cut(s) 230, 677, 2058
Hin1II CATG 9 cut(s) 322, 521, 606, 768, 1241, 1499, 1537, 1870, 1992
Hin6I GCGC 3 cut(s) 228, 675, 2056
HinP1I GCGC 3 cut(s) 228, 675, 2056
HincII GTYRAC 2 cut(s) 97, 535
HindII GTYRAC 2 cut(s) 97, 535
HindIII AAGCTT 2 cut(s) 1058, 1460
HpaII CCGG 4 cut(s) 725, 1640, 1956, 2028
HphI GGTGA 7 cut(s) 139, 170, 280, 301, 359, 1259, 1945
Hpy166II GTNNAC 8 cut(s) 97, 535, 1008, 1019, 1087, 1264, 1492, 1594
Hpy188I TCNGA 1 cut(s) 1588
Hpy188III TCNNGA 7 cut(s) 174, 319, 512, 665, 1238, 1382, 1805
Hpy8I GTNNAC 8 cut(s) 97, 535, 1008, 1019, 1087, 1264, 1492, 1594
HpyAV CCTTC 7 cut(s) 118, 709, 1265, 1563, 1629, 1833, 1890
HpyCH4III ACNGT 9 cut(s) 485, 497, 1016, 1333, 1519, 1598, 1783, 1816, 2022
HpyCH4IV ACGT 3 cut(s) 650, 1901, 1943
HpyF10VI GCNNNNNNNGC 5 cut(s) 236, 245, 761, 1483, 1876
HpyF3I CTNAG 7 cut(s) 547, 657, 936, 1047, 1104, 1357, 1980
HpySE526I ACGT 3 cut(s) 650, 1901, 1943
Hsp92II CATG 9 cut(s) 322, 521, 606, 768, 1241, 1499, 1537, 1870, 1992
HspAI GCGC 3 cut(s) 228, 675, 2056
KroI GCCGGC 1 cut(s) 2027
KroNI GCCGGC 1 cut(s) 2029
Ksp22I TGATCA 1 cut(s) 514
KspI CCGCGG 1 cut(s) 1001
Kzo9I GATC 8 cut(s) 502, 514, 587, 1145, 1185, 1807, 1958, 1972
LguI GCTCTTC 1 cut(s) 2038
LmnI GCTCC 3 cut(s) 434, 727, 1320
Lsp1109I GCAGC 2 cut(s) 764, 1231
LweI GCATC 3 cut(s) 151, 259, 1370
MaeI CTAG 4 cut(s) 1140, 1544, 1575, 1616
MaeII ACGT 3 cut(s) 650, 1901, 1943
MaeIII GTNAC 2 cut(s) 1506, 1558
MalI GATC 8 cut(s) 504, 516, 589, 1147, 1187, 1809, 1960, 1974
MboI GATC 8 cut(s) 502, 514, 587, 1145, 1185, 1807, 1958, 1972
MboII GAAGA 9 cut(s) 44, 49, 64, 355, 952, 1141, 1370, 1644, 2025
MflI RGATCY 1 cut(s) 502
MlyI GAGTC 3 cut(s) 189, 1092, 1115
MmeI TCCRAC 2 cut(s) 462, 1419
Mph1103I ATGCAT 1 cut(s) 604
MroNI GCCGGC 1 cut(s) 2027
MseI TTAA 4 cut(s) 489, 635, 1419, 1842
MspA1I CMGCKG 2 cut(s) 1000, 2066
MspI CCGG 4 cut(s) 725, 1640, 1956, 2028
MspR9I CCNGG 1 cut(s) 812
Mva1269I GAATGC 1 cut(s) 328
MvaI CCWGG 1 cut(s) 812
MvnI CGCG 2 cut(s) 1000, 2056
MwoI GCNNNNNNNGC 5 cut(s) 236, 245, 761, 1483, 1876
NaeI GCCGGC 1 cut(s) 2029
NcoI CCATGG 2 cut(s) 1495, 1533
NdeI CATATG 1 cut(s) 955
NdeII GATC 8 cut(s) 502, 514, 587, 1145, 1185, 1807, 1958, 1972
NgoMIV GCCGGC 1 cut(s) 2027
NlaIII CATG 9 cut(s) 322, 521, 606, 768, 1241, 1499, 1537, 1870, 1992
NlaIV GGNNCC 2 cut(s) 504, 1531
NmuCI GTSAC 2 cut(s) 1506, 1558
NsiI ATGCAT 1 cut(s) 604
NspV TTCGAA 3 cut(s) 383, 1857, 2036
PagI TCATGA 2 cut(s) 318, 1237
PaqCI CACCTGC 1 cut(s) 1921
PceI AGGCCT 1 cut(s) 1822
PciSI GCTCTTC 1 cut(s) 2038
PcsI WCGNNNNNNNCGW 1 cut(s) 252
PctI GAATGC 1 cut(s) 328
PdiI GCCGGC 1 cut(s) 2029
PfeI GAWTC 8 cut(s) 199, 380, 457, 525, 661, 1292, 1442, 1583
PflMI CCANNNNNTGG 1 cut(s) 1501
PkrI GCNGC 3 cut(s) 754, 999, 1221
PleI GAGTC 3 cut(s) 188, 1091, 1114
PpsI GAGTC 3 cut(s) 188, 1091, 1114
PshBI ATTAAT 1 cut(s) 1842
PsiI TTATAA 1 cut(s) 615
Psp6I CCWGG 1 cut(s) 810
PspGI CCWGG 1 cut(s) 810
PspN4I GGNNCC 2 cut(s) 504, 1531
PspPI GGNCC 2 cut(s) 212, 995
PstI CTGCAG 1 cut(s) 754
PsuI RGATCY 1 cut(s) 502
RsaI GTAC 3 cut(s) 698, 1169, 1904
RsaNI GTAC 3 cut(s) 697, 1168, 1903
SacII CCGCGG 1 cut(s) 1001
SapI GCTCTTC 1 cut(s) 2038
SaqAI TTAA 4 cut(s) 489, 635, 1419, 1842
SatI GCNGC 3 cut(s) 753, 998, 1220
Sau3AI GATC 8 cut(s) 502, 514, 587, 1145, 1185, 1807, 1958, 1972
Sau96I GGNCC 2 cut(s) 212, 995
SchI GAGTC 3 cut(s) 189, 1092, 1115
ScrFI CCNGG 1 cut(s) 812
SfaNI GCATC 3 cut(s) 151, 259, 1370
SfcI CTRYAG 2 cut(s) 750, 1594
Sfr303I CCGCGG 1 cut(s) 1001
SfuI TTCGAA 3 cut(s) 383, 1857, 2036
SgrBI CCGCGG 1 cut(s) 1001
SinI GGWCC 1 cut(s) 212
SseBI AGGCCT 1 cut(s) 1822
SsiI CCGC 5 cut(s) 215, 998, 1000, 1175, 2064
SspMI CTAG 4 cut(s) 1140, 1544, 1575, 1616
StuI AGGCCT 1 cut(s) 1822
StyD4I CCNGG 1 cut(s) 810
StyI CCWWGG 4 cut(s) 154, 1351, 1495, 1533
TaaI ACNGT 9 cut(s) 485, 497, 1016, 1333, 1519, 1598, 1783, 1816, 2022
TaiI ACGT 3 cut(s) 653, 1904, 1946
TaqI TCGA 6 cut(s) 87, 383, 1644, 1857, 1975, 2036
TaqII GACCGA 1 cut(s) 869
TatI WGTACW 1 cut(s) 1167
TauI GCSGC 1 cut(s) 1000
TfiI GAWTC 8 cut(s) 199, 380, 457, 525, 661, 1292, 1442, 1583
Tru1I TTAA 4 cut(s) 489, 635, 1419, 1842
Tru9I TTAA 4 cut(s) 489, 635, 1419, 1842
TscAI CASTG 2 cut(s) 1899, 1988
TseFI GTSAC 2 cut(s) 1506, 1558
TseI GCWGC 2 cut(s) 752, 1219
Tsp45I GTSAC 2 cut(s) 1506, 1558
TspDTI ATGAA 9 cut(s) 335, 846, 904, 990, 1254, 1325, 1746, 1977, 2004
TspRI CASTG 2 cut(s) 1899, 1988
Van91I CCANNNNNTGG 1 cut(s) 1501
VpaK11BI GGWCC 1 cut(s) 212
VspI ATTAAT 1 cut(s) 1842
XapI RAATTY 6 cut(s) 18, 397, 631, 977, 1748, 2050
XmiI GTMKAC 4 cut(s) 1086, 1263, 1491, 1593
XspI CTAG 4 cut(s) 1140, 1544, 1575, 1616
Zsp2I ATGCAT 1 cut(s) 604
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.