Rw2G016890

Belongs to the leguminous lectin family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
20405329 .. 20407355
2027 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G016890.1

Sequence Viewer

Length: 1929 bp
ATGAACGACTTAAAATTCGAAGGTGATGCATTTCCATCATCGGGAGTTATCCAACTCACAAAGAATCAAGCTGATGGTCCCCTCACTAGTAGCACCGGTCGAGCCTCCTACGCCCTACCAGTGCGCCTTTGGGATGCCAGCACGGGGAGGCTCACTGACTTCACCACTCATTTTTCTTTTGTCATGAATGCCTTAAATAATAAATACTTTGGTGATGGTATATCTTTCTTCATTGCACCATTTGAGTCACAGATCCCCTCCAATTCGAGTGGTGGGTTACTTGCACTAGTTAGCTATGATACTGCTTTTGATGCTTCCAGAAATAAATTTGTTGCTGTTGAGTTTGACAGTAATAACAATACATGGGATCCAATTGGTGATCATGTAGGAATTGATGTCAATTCCATTGTCTCGGTGACTAATGTCACATGGAAAACAACCATAAAAAATGGATCAGTAGCAAATGCATGGGTAAGTTATAACTCGACCACCCATAATTTGACTGTTTTTTTAACTTACGCCAAAAATCCTACCTTCACCGGTAGAGAATGTAGCCTTTCATACATAGTTGATTTGAAGAATGAGTTGCCTGAGAAAGTTAGAGTTGGTTTCTCTGCCGCCACGGGTGATTGGGTCGAAATACACAACATTAAGTCCTGGTCATTTAGTTCAAGCTTGGAGATTAATCATGGGGCAAAAAAAGTGAGGTTGGCAGCTGGTCTAGGCACCGGTTTCGGTCTCTTGACTTGTGGACTAGGTCTGTTCTGGTTCATCACATGGAGAAAAAAAACTGCCAAGAGAGATGACGATTATGACATGTCTATGGATGATGAATTTGACAAAGGAACAGGGCCACGGAGGTTCACTTACAGCGAAATAAGCCGTGCAACAAACAACTTTGCCGAAGGAGGGAAACTTGGCGAGGGAGGCTTTGGAGGTGTCTACAAGGGTTTGTTAAATGAATCCAACACAGAAGTTGCTGTCAAGAGGGTGTCTAGAACATCAAAGCAGGGGAAAAAGGAGTACGTGGCAGAAGTGAGGATCATCAGTCGACTAAGGCACAGAAATTTGGTTCAACTAATTGGTTGGTGTCATGAACAAGGTGAGTTTCTTCTTGTGTATGAGATCATGCCAAATGGGAGTCTTGATTCGTATCTGTTTGGAATGAGCTACAGTCTAAGTTGGCCAGTGAGGTTCAAAATAGCACTTGGATTGGCATCAGCCGTTTTGTACCTTCATGAGGAATGGGAACAATGTGTGGTGCATAGAGATATCAAGTCAAGCAATGTGATGTTGGATTCAAATTTCAATGCCAAGCTTGGAGATTTTGGGCTTGCAAGGCTTGTAGACCATGAGTTGGGTTCACAAACAACTGTTTTGGCAGGCACAATGGGTTATCTAGCCCCTGAGTGTGTCACTACTGGTAAAGCCAGCAAAGAATCTGATGTCTATAGTTTTGGGGTAGTTGCCCTTGAAATCAGTTGTGGAAGAAAACCAGTTGAAGCCAAAGCAGAACCAAGCAAAGTGAGGCTTGTGGAGTGGGTTTGGGATCTCTATGGAAAAGGTCAAATACTACAAGCAGTTGACGAGAGGTTGAAAATGGAATATGATGAGAAGGAAATCGAGTGCTTGATGGTGGTAGGGTTATGGTGTTGCCACCCTGACCCAACTGTCCGGCCTTCAATTAGGCAAGTGATCAATGTTCTCACTTTTGAAGCTCCTATACCAAGCCTCCCATCAAAGTTGCCTGTGCCAATGTACTTTGCTCCTCCATTGGATATGTGTAGATTCTCCTATACATCATCTAACTTTACAGGGTCATCGGTTAAGGATCGATCTCAGTGTTCTTGTACTACTTGCTCTACATTCAATTCATCATCAGCAGGATCTTCAAAAGCTCTGTTGAAGCTGAATAAATCTGTTGTGTAG

Protein Analysis

642

Amino Acids

70.9

Weight (kDa)

6.62

Isoelectric Point (pI)

35.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 3 - 233 3.8e-66 Legume lectin domain
Pkinase PF00069 301 - 567 8.8e-50 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 304 - 568 4.8e-50 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 480
AasI GACNNNNNNGTC 1 cut(s) 1670
AccB1I GGYRCC 1 cut(s) 725
AccB7I CCANNNNNTGG 1 cut(s) 1357
AccI GTMKAC 3 cut(s) 942, 1051, 1347
AciI CCGC 1 cut(s) 618
AclWI GGATC 8 cut(s) 247, 362, 375, 460, 1049, 1557, 1839, 1894
AcoI YGGCCR 1 cut(s) 1184
AcsI RAATTY 5 cut(s) 14, 326, 833, 1066, 1303
AfaI GTAC 4 cut(s) 1025, 1232, 1760, 1852
AfiI CCNNNNNNNGG 5 cut(s) 41, 144, 909, 1240, 1357
AflIII ACRYGT 1 cut(s) 816
AgeI ACCGGT 3 cut(s) 95, 539, 728
AhlI ACTAGT 2 cut(s) 86, 286
AjnI CCWGG 1 cut(s) 656
AluBI AGCT 9 cut(s) 71, 294, 675, 716, 1170, 1318, 1718, 1898, 1909
AluI AGCT 9 cut(s) 71, 294, 675, 716, 1170, 1318, 1718, 1898, 1909
Alw26I GTCTC 2 cut(s) 415, 743
AlwI GGATC 8 cut(s) 247, 362, 375, 460, 1049, 1557, 1839, 1894
AoxI GGCC 3 cut(s) 851, 1184, 1676
ApeKI GCWGC 1 cut(s) 713
ApoI RAATTY 5 cut(s) 14, 326, 833, 1066, 1303
ArsI GACNNNNNNTTYG 1 cut(s) 31
AseI ATTAAT 1 cut(s) 684
AsiGI ACCGGT 3 cut(s) 95, 539, 728
AspLEI GCGC 1 cut(s) 126
AspS9I GGNCC 2 cut(s) 77, 851
AsuHPI GGTGA 8 cut(s) 35, 154, 224, 389, 427, 529, 638, 1115
AsuII TTCGAA 1 cut(s) 18
AvaII GGWCC 1 cut(s) 77
BalI TGGCCA 1 cut(s) 1186
BamHI GGATCC 1 cut(s) 367
BanI GGYRCC 1 cut(s) 725
BarI GAAGNNNNNNTAC 2 cut(s) 1707, 1739
BbvI GCAGC 1 cut(s) 725
BccI CCATC 5 cut(s) 43, 68, 209, 1627, 1744
BceAI ACGGC 2 cut(s) 867, 1208
BcgI CGANNNNNNTGC 4 cut(s) 8, 42, 715, 749
BciT130I CCWGG 1 cut(s) 658
BclI TGATCA 2 cut(s) 379, 1695
BcoDI GTCTC 2 cut(s) 415, 743
BcuI ACTAGT 2 cut(s) 86, 286
BfaI CTAG 6 cut(s) 87, 287, 722, 755, 996, 1400
BfmI CTRYAG 2 cut(s) 1171, 1450
BisI GCNGC 2 cut(s) 618, 714
BlsI GCNGC 2 cut(s) 619, 715
Bme1390I CCNGG 1 cut(s) 658
Bme18I GGWCC 1 cut(s) 77
BmgT120I GGNCC 2 cut(s) 77, 851
BmiI GGNNCC 3 cut(s) 79, 369, 727
BmrFI CCNGG 1 cut(s) 658
BmsI GCATC 4 cut(s) 16, 124, 301, 1226
BoxI GACNNNNGTC 1 cut(s) 422
Bpu14I TTCGAA 1 cut(s) 18
Bsa29I ATCGAT 1 cut(s) 1834
BsaAI YACGTR 1 cut(s) 1027
BsaBI GATNNNNATC 2 cut(s) 1152, 1216
BsaI GGTCTC 1 cut(s) 743
BsaJI CCNNGG 2 cut(s) 621, 854
BsaWI WCCGGW 3 cut(s) 95, 539, 728
BsaXI ACNNNNNCTCC 2 cut(s) 1716, 1746
Bsc4I CCNNNNNNNGG 5 cut(s) 41, 144, 909, 1240, 1357
Bse118I RCCGGY 3 cut(s) 95, 539, 728
Bse1I ACTGG 4 cut(s) 119, 1187, 1426, 1496
Bse3DI GCAATG 2 cut(s) 231, 1291
Bse8I GATNNNNATC 2 cut(s) 1152, 1216
BseBI CCWGG 1 cut(s) 658
BseCI ATCGAT 1 cut(s) 1834
BseDI CCNNGG 2 cut(s) 621, 854
BseGI GGATG 2 cut(s) 139, 832
BseJI GATNNNNATC 2 cut(s) 1152, 1216
BseLI CCNNNNNNNGG 5 cut(s) 41, 144, 909, 1240, 1357
BseMI GCAATG 2 cut(s) 231, 1291
BseMII CTCAG 3 cut(s) 582, 1398, 1853
BseNI ACTGG 4 cut(s) 119, 1187, 1426, 1496
BseRI GAGGAG 1 cut(s) 1758
BseXI GCAGC 1 cut(s) 725
Bsh1285I CGRYCG 1 cut(s) 100
BshFI GGCC 3 cut(s) 853, 1186, 1678
BshNI GGYRCC 1 cut(s) 725
BshTI ACCGGT 3 cut(s) 95, 539, 728
BshVI ATCGAT 1 cut(s) 1834
BsiEI CGRYCG 1 cut(s) 100
BsiSI CCGG 4 cut(s) 96, 540, 729, 1675
BslFI GGGAC 1 cut(s) 63
BslI CCNNNNNNNGG 5 cut(s) 41, 144, 909, 1240, 1357
BsmAI GTCTC 2 cut(s) 415, 743
BsmFI GGGAC 1 cut(s) 63
BsmI GAATGC 1 cut(s) 193
BsnI GGCC 3 cut(s) 853, 1186, 1678
Bso31I GGTCTC 1 cut(s) 743
Bsp119I TTCGAA 1 cut(s) 18
BspACI CCGC 1 cut(s) 618
BspANI GGCC 3 cut(s) 853, 1186, 1678
BspCNI CTCAG 3 cut(s) 583, 1399, 1852
BspDI ATCGAT 1 cut(s) 1834
BspHI TCATGA 3 cut(s) 183, 1093, 1237
BspLI GGNNCC 3 cut(s) 79, 369, 727
BspPI GGATC 8 cut(s) 247, 362, 375, 460, 1049, 1557, 1839, 1894
BspT104I TTCGAA 1 cut(s) 18
BspT107I GGYRCC 1 cut(s) 725
BspTNI GGTCTC 1 cut(s) 743
BsrDI GCAATG 2 cut(s) 231, 1291
BsrFI RCCGGY 3 cut(s) 95, 539, 728
BsrI ACTGG 4 cut(s) 119, 1187, 1426, 1496
BssAI RCCGGY 3 cut(s) 95, 539, 728
BssECI CCNNGG 2 cut(s) 621, 854
Bst2UI CCWGG 1 cut(s) 658
Bst4CI ACNGT 5 cut(s) 350, 505, 1175, 1375, 1672
BstBAI YACGTR 1 cut(s) 1027
BstBI TTCGAA 1 cut(s) 18
BstC8I GCNNGC 4 cut(s) 139, 1335, 1384, 1432
BstDEI CTNAG 5 cut(s) 591, 1055, 1178, 1407, 1839
BstDSI CCRYGG 2 cut(s) 621, 854
BstENI CCTNNNNNAGG 1 cut(s) 1238
BstF5I GGATG 2 cut(s) 139, 832
BstHHI GCGC 1 cut(s) 126
BstMAI GTCTC 2 cut(s) 415, 743
BstMCI CGRYCG 1 cut(s) 100
BstMWI GCNNNNNNNGC 5 cut(s) 110, 311, 879, 927, 1339
BstNI CCWGG 1 cut(s) 658
BstNSI RCATGY 1 cut(s) 820
BstPAI GACNNNNGTC 1 cut(s) 422
BstSCI CCNGG 1 cut(s) 656
BstSFI CTRYAG 2 cut(s) 1171, 1450
BstV1I GCAGC 1 cut(s) 725
BstX2I RGATCY 4 cut(s) 252, 367, 1549, 1886
BstYI RGATCY 4 cut(s) 252, 367, 1549, 1886
Bsu15I ATCGAT 1 cut(s) 1834
BsuRI GGCC 3 cut(s) 853, 1186, 1678
BsuTUI ATCGAT 1 cut(s) 1834
BtgI CCRYGG 2 cut(s) 621, 854
BtsCI GGATG 2 cut(s) 139, 832
BtsIMutI CAGTG 4 cut(s) 126, 153, 1194, 1847
Cac8I GCNNGC 4 cut(s) 139, 1335, 1384, 1432
CciI TCATGA 3 cut(s) 183, 1093, 1237
CfoI GCGC 1 cut(s) 126
Cfr10I RCCGGY 3 cut(s) 95, 539, 728
Cfr13I GGNCC 2 cut(s) 77, 851
ClaI ATCGAT 1 cut(s) 1834
Csp6I GTAC 4 cut(s) 1024, 1231, 1759, 1851
CspAI ACCGGT 3 cut(s) 95, 539, 728
CspCI CAANNNNNGTGG 2 cut(s) 250, 285
CviQI GTAC 4 cut(s) 1024, 1231, 1759, 1851
DdeI CTNAG 5 cut(s) 591, 1055, 1178, 1407, 1839
DrdI GACNNNNNNGTC 1 cut(s) 1670
DseDI GACNNNNNNGTC 1 cut(s) 1670
EaeI YGGCCR 1 cut(s) 1184
Eco31I GGTCTC 1 cut(s) 743
Eco32I GATATC 1 cut(s) 1273
Eco47I GGWCC 1 cut(s) 77
EcoNI CCTNNNNNAGG 1 cut(s) 1238
EcoRII CCWGG 1 cut(s) 656
EcoRV GATATC 1 cut(s) 1273
EcoT22I ATGCAT 2 cut(s) 31, 469
FalI AAGNNNNNCTT 2 cut(s) 1515, 1547
FaqI GGGAC 1 cut(s) 63
FbaI TGATCA 2 cut(s) 379, 1695
FblI GTMKAC 3 cut(s) 942, 1051, 1347
Fnu4HI GCNGC 2 cut(s) 618, 714
FokI GGATG 2 cut(s) 146, 839
Fsp4HI GCNGC 2 cut(s) 618, 714
FspBI CTAG 6 cut(s) 87, 287, 722, 755, 996, 1400
GlaI GCGC 1 cut(s) 125
GluI GCNGC 2 cut(s) 618, 714
HaeIII GGCC 3 cut(s) 853, 1186, 1678
HapII CCGG 4 cut(s) 96, 540, 729, 1675
HhaI GCGC 1 cut(s) 126
Hin6I GCGC 1 cut(s) 124
HinP1I GCGC 1 cut(s) 124
HincII GTYRAC 2 cut(s) 1052, 1585
HindII GTYRAC 2 cut(s) 1052, 1585
HindIII AAGCTT 2 cut(s) 673, 1316
HinfI GANTC 8 cut(s) 64, 245, 962, 1141, 1148, 1298, 1439, 1788
HpaII CCGG 4 cut(s) 96, 540, 729, 1675
HphI GGTGA 8 cut(s) 35, 154, 224, 389, 427, 529, 638, 1115
Hpy166II GTNNAC 7 cut(s) 752, 864, 943, 1052, 1348, 1364, 1585
Hpy188I TCNGA 1 cut(s) 1444
Hpy188III TCNNGA 9 cut(s) 42, 184, 318, 742, 985, 996, 1094, 1145, 1238
Hpy8I GTNNAC 7 cut(s) 752, 864, 943, 1052, 1348, 1364, 1585
HpyAV CCTTC 6 cut(s) 14, 544, 899, 1244, 1609, 1689
HpyCH4III ACNGT 5 cut(s) 350, 505, 1175, 1375, 1672
HpyCH4IV ACGT 1 cut(s) 1026
HpyCH4V TGCA 7 cut(s) 29, 236, 284, 467, 887, 1264, 1337
HpyF10VI GCNNNNNNNGC 5 cut(s) 110, 311, 879, 927, 1339
HpyF3I CTNAG 5 cut(s) 591, 1055, 1178, 1407, 1839
HpySE526I ACGT 1 cut(s) 1026
HspAI GCGC 1 cut(s) 124
Ksp22I TGATCA 2 cut(s) 379, 1695
LmnI GCTCC 2 cut(s) 1723, 1771
Lsp1109I GCAGC 1 cut(s) 725
LweI GCATC 4 cut(s) 16, 124, 301, 1226
MaeI CTAG 6 cut(s) 87, 287, 722, 755, 996, 1400
MaeII ACGT 1 cut(s) 1026
MaeIII GTNAC 5 cut(s) 246, 276, 415, 424, 1414
MboII GAAGA 5 cut(s) 220, 589, 1103, 1500, 1881
MfeI CAATTG 1 cut(s) 372
MflI RGATCY 4 cut(s) 252, 367, 1549, 1886
MlsI TGGCCA 1 cut(s) 1186
MluNI TGGCCA 1 cut(s) 1186
MlyI GAGTC 2 cut(s) 254, 1150
MmeI TCCRAC 3 cut(s) 76, 990, 1275
Mox20I TGGCCA 1 cut(s) 1186
Mph1103I ATGCAT 2 cut(s) 31, 469
MscI TGGCCA 1 cut(s) 1186
MseI TTAA 7 cut(s) 11, 194, 512, 651, 684, 956, 1827
MslI CAYNNNNRTG 1 cut(s) 821
Msp20I TGGCCA 1 cut(s) 1186
MspA1I CMGCKG 1 cut(s) 716
MspI CCGG 4 cut(s) 96, 540, 729, 1675
MspR9I CCNGG 1 cut(s) 658
MunI CAATTG 1 cut(s) 372
Mva1269I GAATGC 1 cut(s) 193
MvaI CCWGG 1 cut(s) 658
MwoI GCNNNNNNNGC 5 cut(s) 110, 311, 879, 927, 1339
NlaIV GGNNCC 3 cut(s) 79, 369, 727
NmuCI GTSAC 4 cut(s) 246, 415, 424, 1414
NsiI ATGCAT 2 cut(s) 31, 469
NspI RCATGY 1 cut(s) 820
NspV TTCGAA 1 cut(s) 18
PagI TCATGA 3 cut(s) 183, 1093, 1237
PciI ACATGT 1 cut(s) 816
PctI GAATGC 1 cut(s) 193
PfeI GAWTC 6 cut(s) 64, 962, 1148, 1298, 1439, 1788
PflFI GACNNNGTC 1 cut(s) 756
PflMI CCANNNNNTGG 1 cut(s) 1357
PinAI ACCGGT 3 cut(s) 95, 539, 728
PkrI GCNGC 2 cut(s) 619, 715
PleI GAGTC 2 cut(s) 253, 1149
PpsI GAGTC 2 cut(s) 253, 1149
Ppu21I YACGTR 1 cut(s) 1027
PscI ACATGT 1 cut(s) 816
PshAI GACNNNNGTC 1 cut(s) 422
PshBI ATTAAT 1 cut(s) 684
PsiI TTATAA 1 cut(s) 480
Psp6I CCWGG 1 cut(s) 656
PspGI CCWGG 1 cut(s) 656
PspN4I GGNNCC 3 cut(s) 79, 369, 727
PspPI GGNCC 2 cut(s) 77, 851
PsuI RGATCY 4 cut(s) 252, 367, 1549, 1886
PsyI GACNNNGTC 1 cut(s) 756
PvuII CAGCTG 1 cut(s) 716
RsaI GTAC 4 cut(s) 1025, 1232, 1760, 1852
RsaNI GTAC 4 cut(s) 1024, 1231, 1759, 1851
RseI CAYNNNNRTG 1 cut(s) 821
SalI GTCGAC 1 cut(s) 1050
SaqAI TTAA 7 cut(s) 11, 194, 512, 651, 684, 956, 1827
SatI GCNGC 2 cut(s) 618, 714
Sau96I GGNCC 2 cut(s) 77, 851
SchI GAGTC 2 cut(s) 254, 1150
ScrFI CCNGG 1 cut(s) 658
SfaNI GCATC 4 cut(s) 16, 124, 301, 1226
SfcI CTRYAG 2 cut(s) 1171, 1450
SfuI TTCGAA 1 cut(s) 18
SinI GGWCC 1 cut(s) 77
SmiMI CAYNNNNRTG 1 cut(s) 821
SpeI ACTAGT 2 cut(s) 86, 286
SsiI CCGC 1 cut(s) 618
SspMI CTAG 6 cut(s) 87, 287, 722, 755, 996, 1400
StyD4I CCNGG 1 cut(s) 656
TaaI ACNGT 5 cut(s) 350, 505, 1175, 1375, 1672
TaiI ACGT 1 cut(s) 1029
TaqI TCGA 8 cut(s) 18, 100, 266, 485, 636, 1051, 1623, 1834
TaqII GACCGA 1 cut(s) 725
TatI WGTACW 2 cut(s) 1758, 1850
TauI GCSGC 1 cut(s) 620
TfiI GAWTC 6 cut(s) 64, 962, 1148, 1298, 1439, 1788
Tru1I TTAA 7 cut(s) 11, 194, 512, 651, 684, 956, 1827
Tru9I TTAA 7 cut(s) 11, 194, 512, 651, 684, 956, 1827
TscAI CASTG 4 cut(s) 126, 160, 1194, 1847
TseFI GTSAC 4 cut(s) 246, 415, 424, 1414
TseI GCWGC 1 cut(s) 713
Tsp45I GTSAC 4 cut(s) 246, 415, 424, 1414
TspGWI ACGGA 1 cut(s) 871
TspRI CASTG 4 cut(s) 126, 160, 1194, 1847
Tth111I GACNNNGTC 1 cut(s) 756
Van91I CCANNNNNTGG 1 cut(s) 1357
VpaK11BI GGWCC 1 cut(s) 77
VspI ATTAAT 1 cut(s) 684
XagI CCTNNNNNAGG 1 cut(s) 1238
XapI RAATTY 5 cut(s) 14, 326, 833, 1066, 1303
XbaI TCTAGA 1 cut(s) 995
XceI RCATGY 1 cut(s) 820
XcmI CCANNNNNNNNNTGG 1 cut(s) 126
XmiI GTMKAC 3 cut(s) 942, 1051, 1347
XspI CTAG 6 cut(s) 87, 287, 722, 755, 996, 1400
Zsp2I ATGCAT 2 cut(s) 31, 469
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.