FvH4_3g19400

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
12573864 .. 12578497
4634 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g19400.t2

Sequence Viewer

Length: 1974 bp
ATGGCTGTGATTAACAGGCTCCGGTTGTCCCTAAACCAGTTTCAATTGCTTATTCTTCTCTCATTACTGTTGCCCTTGTTTGCAACTTCATTGACCTTCAATTTTCCCAGCTTTCCCCCTGACGTTGCCACCAATATATCAATGGAGGGAAATGCTTCAGCCGATGGCTCCCTCCGCCTCACCAAAAGTGCTCTTGACCAGGACCTAAGTGGCAGCACCGGTAGAGCCACCTACAAAAAGACCTTCCTCCTCAGACAAAAATCCACCGGAAAACTCGCTGATTTCACGTCAAGTTTCACGTTCGCCATTGACTCCGACAACAACCCCAACTACGCAGATGGGCTAGCATTCTTCCTAGCGCCGGCAGGGTCCTCACTGGACAGCATAATAGGGCAAGGTAGCAGTCTTGGCCTCCCTGTCAACAGTACGCTGGCAAACTATACCATGTCAAGTACTGAATATCCGTTTGTCGCCGTCGAGTTTGATATCTTCAACAACTCAGATAGAAGATCGATTGATTGGGGTCTAAATTACACTCATGTCGGCATCGACATCAACTCCGTCAAGTCTAACGTCACCGCGCCGTGGAATGGTGGGATTACCACTGGAAAAGAAAACAATGCCATGATTAGTTACAACTCCACCTCCAAGAATCTTAGAGTTGCATTCACAACGATTCAAAACGGGGTCCAGGTTATCAGAAATATTGATTTCTCAGTTGATCTGCTCCAACACTTGCCCGATAGAGTCATCGTTGGTTTCTCGGCTTCAACGGGTCTACAAGTTGCTCTGCATAAGATCATTTCTTGGAGCTTTGATTCAACTTCATTGGCAGATGAAGACATCACATCAACTCTTCCTGCGCCAAAGTCTGGAAATGCCAATGTTGGACTAGTAGTTGGGTTGGCTGTTGGGGGAGGTGTTATCTTGGTTGGTGTGTTAGGTTTCGTTAGGTTCCTCTTCTGCACGAAGAGGAGGGAAACAACTGGGGAAAGTACTGATGATGATACTAGGCACTTGCCCGATTGGGTAATTGTCGGGTTCTCTGCTTCAACTGGTTCTAGGTATGCTGTGCACGAGATCATCGCATGGAATTTCACGTCGACTTCTATTGTTGATGAGTTTGTTGATGCCACAGACACTACGCCAGCTACACCTAACCCTAATACAGTTGATATCAAGTCAAGAAATAACAAAACACCGCGAATAGTCGTGGGGCTAGGTGTTGGTTTAAGTATCTTGGTGGCTGCTTTGGCTTTGGTTTGGTTCATCTTTCGGAGGAAGAGCGATGCAGGGAGAAATGATGAAGACTATGATGGAGAGAAGCTTGGAGAGGGAGGATTTGGTGGAGTCTATAGAGGATTCATCAAAGACTTGAACACATATGTTGCTGTTAAGAGGATCTCCAAGGGATCCAAACAAGGGATAAAGGAGTACACAGCCGAAGTCAGGATCATCGGTCGACTTAGGCATCGAAACCTTGTGCAACTCATTGGCAAGGCTAGCAAGGAGTCGGATGTGTATAGCTTCGGAGTTGTTGCTTTGGAAATAGCTTGCGGGAGAAAATCCATGGATTTCGATTTGGAAAATAGTATGATCAACTTAGTGGAGTGGGTGTGGGAACTTTATGGAGAAGGGAAACTTATTGCAGCAGCTGACCCAAAATTGTGTGGAGATTTTGATGAAAGACAAATGGAGTGTTTGATGATTGTTGGGTTGTGGTGTGCTCACCCAGACTATAGTTTCAGACTACCAATACTACAAGCGCTTGAAGTGCTTAACTTCAAGAACCAATTACCAACTCTCCCAGCAATCATGCCGATGGTTCCTTCTTTTGCTCGTCCAGTTCTGGCATTTACAAGTGACACCATTAGTGGTTCTGAAACCTGGCATACTAAGCCTTCAAACATTGAGAGCACCAATACCTCTAAGTTTGCTCTTCCTCTCCCAGTGCCTCCTTCAAATCAATTCTAG

Protein Analysis

658

Amino Acids

71.61

Weight (kDa)

5.75

Isoelectric Point (pI)

32.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 31 - 285 5.5e-59 Legume lectin domain
Lectin_L-type_dom PF18483 41 - 267 1.9e-08 Legume lectin beta-barrel domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 872
AccI GTMKAC 3 cut(s) 778, 1103, 1462
AccII CGCG 2 cut(s) 581, 1204
AciI CCGC 4 cut(s) 175, 579, 1202, 1557
AclWI GGATC 4 cut(s) 1407, 1409, 1420, 1460
AcsI RAATTY 1 cut(s) 1093
AcuI CTGAAG 1 cut(s) 141
AfaI GTAC 4 cut(s) 427, 454, 997, 1436
AfeI AGCGCT 1 cut(s) 1767
AfiI CCNNNNNNNGG 6 cut(s) 361, 585, 590, 872, 1422, 1449
AgeI ACCGGT 1 cut(s) 218
AhlI ACTAGT 1 cut(s) 892
AjiI CACGTC 2 cut(s) 288, 1101
AjnI CCWGG 3 cut(s) 198, 690, 1886
AluBI AGCT 7 cut(s) 111, 813, 1151, 1327, 1527, 1553, 1655
AluI AGCT 7 cut(s) 111, 813, 1151, 1327, 1527, 1553, 1655
Alw21I GWGCWC 4 cut(s) 193, 1077, 1729, 1919
Alw44I GTGCAC 1 cut(s) 1073
AlwI GGATC 4 cut(s) 1407, 1409, 1420, 1460
AlwNI CAGNNNCTG 1 cut(s) 1655
Aor51HI AGCGCT 1 cut(s) 1767
AoxI GGCC 1 cut(s) 409
ApaLI GTGCAC 1 cut(s) 1073
ApeKI GCWGC 4 cut(s) 213, 1247, 1649, 1652
ApoI RAATTY 1 cut(s) 1093
AsiGI ACCGGT 1 cut(s) 218
Asp700I GAANNNNTTC 1 cut(s) 154
AspLEI GCGC 4 cut(s) 361, 583, 865, 1768
AspS9I GGNCC 3 cut(s) 202, 369, 688
AsuHPI GGTGA 3 cut(s) 172, 568, 1721
AsuNHI GCTAGC 2 cut(s) 343, 1502
AvaII GGWCC 3 cut(s) 202, 369, 688
BaeGI GKGCMC 1 cut(s) 1077
BamHI GGATCC 1 cut(s) 1412
BauI CACGAG 1 cut(s) 1076
BbsI GAAGAC 2 cut(s) 846, 1314
Bbv12I GWGCWC 4 cut(s) 193, 1077, 1729, 1919
BbvI GCAGC 4 cut(s) 225, 1234, 1661, 1664
BccI CCATC 4 cut(s) 158, 332, 1310, 1816
BceAI ACGGC 2 cut(s) 458, 568
BciT130I CCWGG 3 cut(s) 200, 692, 1888
BclI TGATCA 1 cut(s) 1596
BcuI ACTAGT 1 cut(s) 892
BfaI CTAG 8 cut(s) 344, 356, 893, 1011, 1062, 1220, 1503, 1972
BfmI CTRYAG 2 cut(s) 1354, 1738
BfoI RGCGCY 2 cut(s) 362, 1769
BisI GCNGC 4 cut(s) 214, 1248, 1650, 1653
BlsI GCNGC 4 cut(s) 215, 1249, 1651, 1654
BmcAI AGTACT 2 cut(s) 454, 997
Bme1390I CCNGG 3 cut(s) 200, 692, 1888
Bme18I GGWCC 3 cut(s) 202, 369, 688
BmgBI CACGTC 2 cut(s) 288, 1101
BmgT120I GGNCC 3 cut(s) 202, 369, 688
BmiI GGNNCC 7 cut(s) 20, 169, 370, 689, 956, 1414, 1827
BmrFI CCNGG 3 cut(s) 200, 692, 1888
BmrI ACTGGG 2 cut(s) 996, 1943
BmsI GCATC 4 cut(s) 555, 1120, 1279, 1480
BmtI GCTAGC 2 cut(s) 347, 1506
BmuI ACTGGG 2 cut(s) 996, 1943
BpiI GAAGAC 2 cut(s) 846, 1314
Bsa29I ATCGAT 1 cut(s) 512
BsaJI CCNNGG 3 cut(s) 584, 1407, 1569
BsaWI WCCGGW 3 cut(s) 21, 218, 266
BsaXI ACNNNNNCTCC 8 cut(s) 542, 572, 629, 659, 1601, 1631, 1788, 1818
Bsc4I CCNNNNNNNGG 6 cut(s) 361, 585, 590, 872, 1422, 1449
Bse118I RCCGGY 2 cut(s) 218, 361
Bse1I ACTGG 7 cut(s) 37, 381, 610, 991, 1060, 1844, 1949
BseBI CCWGG 3 cut(s) 200, 692, 1888
BseCI ATCGAT 1 cut(s) 512
BseDI CCNNGG 3 cut(s) 584, 1407, 1569
BseGI GGATG 1 cut(s) 1522
BseLI CCNNNNNNNGG 6 cut(s) 361, 585, 590, 872, 1422, 1449
BseMII CTCAG 3 cut(s) 265, 513, 729
BseNI ACTGG 7 cut(s) 37, 381, 610, 991, 1060, 1844, 1949
BseRI GAGGAG 2 cut(s) 239, 988
BseSI GKGCMC 1 cut(s) 1077
BseXI GCAGC 4 cut(s) 225, 1234, 1661, 1664
BseYI CCCAGC 2 cut(s) 107, 1807
BsgI GTGCAG 1 cut(s) 949
Bsh1236I CGCG 2 cut(s) 581, 1204
Bsh1285I CGRYCG 1 cut(s) 1462
BshFI GGCC 1 cut(s) 411
BshTI ACCGGT 1 cut(s) 218
BshVI ATCGAT 1 cut(s) 512
BsiEI CGRYCG 1 cut(s) 1462
BsiHKAI GWGCWC 4 cut(s) 193, 1077, 1729, 1919
BsiSI CCGG 4 cut(s) 22, 219, 267, 362
BslFI GGGAC 1 cut(s) 13
BslI CCNNNNNNNGG 6 cut(s) 361, 585, 590, 872, 1422, 1449
BsmFI GGGAC 1 cut(s) 13
BsmI GAATGC 2 cut(s) 347, 665
BsnI GGCC 1 cut(s) 411
Bsp1286I GDGCHC 4 cut(s) 193, 1077, 1729, 1919
Bsp143I GATC 8 cut(s) 509, 721, 798, 1080, 1401, 1412, 1452, 1596
Bsp19I CCATGG 1 cut(s) 1569
BspACI CCGC 4 cut(s) 175, 579, 1202, 1557
BspANI GGCC 1 cut(s) 411
BspCNI CTCAG 3 cut(s) 264, 512, 728
BspDI ATCGAT 1 cut(s) 512
BspFNI CGCG 2 cut(s) 581, 1204
BspLI GGNNCC 7 cut(s) 20, 169, 370, 689, 956, 1414, 1827
BspOI GCTAGC 2 cut(s) 347, 1506
BspPI GGATC 4 cut(s) 1407, 1409, 1420, 1460
BspQI GCTCTTC 2 cut(s) 1277, 1944
BsrFI RCCGGY 2 cut(s) 218, 361
BsrI ACTGG 7 cut(s) 37, 381, 610, 991, 1060, 1844, 1949
BssAI RCCGGY 2 cut(s) 218, 361
BssECI CCNNGG 3 cut(s) 584, 1407, 1569
BssMI GATC 8 cut(s) 509, 721, 798, 1080, 1401, 1412, 1452, 1596
BssSI CACGAG 1 cut(s) 1076
BssT1I CCWWGG 2 cut(s) 1407, 1569
Bst2BI CACGAG 1 cut(s) 1076
Bst2UI CCWGG 3 cut(s) 200, 692, 1888
Bst4CI ACNGT 3 cut(s) 69, 425, 1171
Bst6I CTCTTC 5 cut(s) 861, 965, 965, 1277, 1944
BstC8I GCNNGC 6 cut(s) 345, 363, 432, 1149, 1504, 1555
BstDEI CTNAG 9 cut(s) 206, 251, 499, 656, 715, 1466, 1603, 1896, 1929
BstDSI CCRYGG 2 cut(s) 584, 1569
BstF5I GGATG 1 cut(s) 1522
BstFNI CGCG 2 cut(s) 581, 1204
BstH2I RGCGCY 2 cut(s) 362, 1769
BstHHI GCGC 4 cut(s) 361, 583, 865, 1768
BstKTI GATC 8 cut(s) 512, 724, 801, 1083, 1404, 1415, 1455, 1599
BstMBI GATC 8 cut(s) 509, 721, 798, 1080, 1401, 1412, 1452, 1596
BstMCI CGRYCG 1 cut(s) 1462
BstMWI GCNNNNNNNGC 6 cut(s) 174, 408, 1253, 1503, 1774, 1897
BstNI CCWGG 3 cut(s) 200, 692, 1888
BstSCI CCNGG 3 cut(s) 198, 690, 1886
BstSFI CTRYAG 2 cut(s) 1354, 1738
BstSLI GKGCMC 1 cut(s) 1077
BstUI CGCG 2 cut(s) 581, 1204
BstV1I GCAGC 4 cut(s) 225, 1234, 1661, 1664
BstV2I GAAGAC 2 cut(s) 846, 1314
BstX2I RGATCY 2 cut(s) 1401, 1412
BstYI RGATCY 2 cut(s) 1401, 1412
Bsu15I ATCGAT 1 cut(s) 512
BsuRI GGCC 1 cut(s) 411
BsuTUI ATCGAT 1 cut(s) 512
BtgI CCRYGG 2 cut(s) 584, 1569
BtgZI GCGATG 2 cut(s) 1069, 1302
BtrI CACGTC 2 cut(s) 288, 1101
BtsCI GGATG 1 cut(s) 1522
BtsIMutI CAGTG 3 cut(s) 374, 603, 1956
Cac8I GCNNGC 6 cut(s) 345, 363, 432, 1149, 1504, 1555
CaiI CAGNNNCTG 1 cut(s) 1655
CfoI GCGC 4 cut(s) 361, 583, 865, 1768
Cfr10I RCCGGY 2 cut(s) 218, 361
Cfr13I GGNCC 3 cut(s) 202, 369, 688
ClaI ATCGAT 1 cut(s) 512
Csp6I GTAC 4 cut(s) 426, 453, 996, 1435
CspAI ACCGGT 1 cut(s) 218
CviAII CATG 6 cut(s) 445, 539, 625, 1089, 1570, 1816
CviQI GTAC 4 cut(s) 426, 453, 996, 1435
DdeI CTNAG 9 cut(s) 206, 251, 499, 656, 715, 1466, 1603, 1896, 1929
DpnI GATC 8 cut(s) 511, 723, 800, 1082, 1403, 1414, 1454, 1598
DpnII GATC 8 cut(s) 509, 721, 798, 1080, 1401, 1412, 1452, 1596
Eam1104I CTCTTC 5 cut(s) 861, 965, 965, 1277, 1944
EarI CTCTTC 5 cut(s) 861, 965, 965, 1277, 1944
EciI GGCGGA 1 cut(s) 164
Eco130I CCWWGG 2 cut(s) 1407, 1569
Eco32I GATATC 2 cut(s) 487, 1177
Eco47I GGWCC 3 cut(s) 202, 369, 688
Eco47III AGCGCT 1 cut(s) 1767
Eco57I CTGAAG 1 cut(s) 141
EcoO109I RGGNCCY 2 cut(s) 202, 369
EcoRII CCWGG 3 cut(s) 198, 690, 1886
EcoRV GATATC 2 cut(s) 487, 1177
EcoT14I CCWWGG 2 cut(s) 1407, 1569
ErhI CCWWGG 2 cut(s) 1407, 1569
FaeI CATG 6 cut(s) 448, 542, 628, 1092, 1573, 1819
FalI AAGNNNNNCTT 2 cut(s) 1626, 1658
FaqI GGGAC 1 cut(s) 13
FatI CATG 6 cut(s) 444, 538, 624, 1088, 1569, 1815
FauI CCCGC 1 cut(s) 1550
FauNDI CATATG 1 cut(s) 1384
FbaI TGATCA 1 cut(s) 1596
FblI GTMKAC 3 cut(s) 778, 1103, 1462
Fnu4HI GCNGC 4 cut(s) 214, 1248, 1650, 1653
FokI GGATG 1 cut(s) 1529
Fsp4HI GCNGC 4 cut(s) 214, 1248, 1650, 1653
FspBI CTAG 8 cut(s) 344, 356, 893, 1011, 1062, 1220, 1503, 1972
GlaI GCGC 4 cut(s) 360, 582, 864, 1767
GluI GCNGC 4 cut(s) 214, 1248, 1650, 1653
GsaI CCCAGC 2 cut(s) 111, 1811
HaeII RGCGCY 2 cut(s) 362, 1769
HaeIII GGCC 1 cut(s) 411
HapII CCGG 4 cut(s) 22, 219, 267, 362
HhaI GCGC 4 cut(s) 361, 583, 865, 1768
Hin1II CATG 6 cut(s) 448, 542, 628, 1092, 1573, 1819
Hin6I GCGC 4 cut(s) 359, 581, 863, 1766
HinP1I GCGC 4 cut(s) 359, 581, 863, 1766
HincII GTYRAC 3 cut(s) 421, 1104, 1463
HindII GTYRAC 3 cut(s) 421, 1104, 1463
HindIII AAGCTT 1 cut(s) 1325
HinfI GANTC 8 cut(s) 311, 652, 676, 747, 818, 1350, 1362, 1511
HpaII CCGG 4 cut(s) 22, 219, 267, 362
HphI GGTGA 3 cut(s) 172, 568, 1721
Hpy166II GTNNAC 6 cut(s) 421, 779, 1075, 1104, 1437, 1463
Hpy188I TCNGA 9 cut(s) 254, 316, 502, 701, 1278, 1516, 1532, 1748, 1882
Hpy188III TCNNGA 5 cut(s) 194, 873, 1185, 1450, 1786
Hpy8I GTNNAC 6 cut(s) 421, 779, 1075, 1104, 1437, 1463
Hpy99I CGWCG 2 cut(s) 479, 1105
HpyAV CCTTC 6 cut(s) 106, 253, 1628, 1839, 1911, 1968
HpyCH4III ACNGT 3 cut(s) 69, 425, 1171
HpyCH4IV ACGT 5 cut(s) 123, 287, 299, 573, 1100
HpyCH4V TGCA 8 cut(s) 83, 665, 793, 966, 1075, 1292, 1486, 1649
HpyF10VI GCNNNNNNNGC 6 cut(s) 174, 408, 1253, 1503, 1774, 1897
HpyF3I CTNAG 9 cut(s) 206, 251, 499, 656, 715, 1466, 1603, 1896, 1929
HpySE526I ACGT 5 cut(s) 123, 287, 299, 573, 1100
Hsp92II CATG 6 cut(s) 448, 542, 628, 1092, 1573, 1819
HspAI GCGC 4 cut(s) 359, 581, 863, 1766
KroI GCCGGC 1 cut(s) 361
KroNI GCCGGC 1 cut(s) 363
Ksp22I TGATCA 1 cut(s) 1596
Kzo9I GATC 8 cut(s) 509, 721, 798, 1080, 1401, 1412, 1452, 1596
LguI GCTCTTC 2 cut(s) 1277, 1944
LmnI GCTCC 4 cut(s) 24, 173, 732, 810
Lsp1109I GCAGC 4 cut(s) 225, 1234, 1661, 1664
LweI GCATC 4 cut(s) 555, 1120, 1279, 1480
MaeI CTAG 8 cut(s) 344, 356, 893, 1011, 1062, 1220, 1503, 1972
MaeII ACGT 5 cut(s) 123, 287, 299, 573, 1100
MaeIII GTNAC 3 cut(s) 574, 632, 1862
MalI GATC 8 cut(s) 511, 723, 800, 1082, 1403, 1414, 1454, 1598
MboI GATC 8 cut(s) 509, 721, 798, 1080, 1401, 1412, 1452, 1596
MfeI CAATTG 1 cut(s) 44
MflI RGATCY 2 cut(s) 1401, 1412
MhlI GDGCHC 4 cut(s) 193, 1077, 1729, 1919
MluCI AATT 8 cut(s) 44, 100, 529, 1032, 1093, 1664, 1793, 1967
MlyI GAGTC 4 cut(s) 305, 756, 1359, 1520
MmeI TCCRAC 4 cut(s) 339, 754, 868, 1494
MroNI GCCGGC 1 cut(s) 361
MroXI GAANNNNTTC 1 cut(s) 154
MseI TTAA 4 cut(s) 12, 1232, 1395, 1779
MslI CAYNNNNRTG 1 cut(s) 1820
MspA1I CMGCKG 1 cut(s) 1655
MspI CCGG 4 cut(s) 22, 219, 267, 362
MspR9I CCNGG 3 cut(s) 200, 692, 1888
MunI CAATTG 1 cut(s) 44
Mva1269I GAATGC 2 cut(s) 347, 665
MvaI CCWGG 3 cut(s) 200, 692, 1888
MvnI CGCG 2 cut(s) 581, 1204
MwoI GCNNNNNNNGC 6 cut(s) 174, 408, 1253, 1503, 1774, 1897
NaeI GCCGGC 1 cut(s) 363
NcoI CCATGG 1 cut(s) 1569
NdeI CATATG 1 cut(s) 1384
NdeII GATC 8 cut(s) 509, 721, 798, 1080, 1401, 1412, 1452, 1596
NgoMIV GCCGGC 1 cut(s) 361
NheI GCTAGC 2 cut(s) 343, 1502
NlaIII CATG 6 cut(s) 448, 542, 628, 1092, 1573, 1819
NlaIV GGNNCC 7 cut(s) 20, 169, 370, 689, 956, 1414, 1827
NmeAIII GCCGAG 1 cut(s) 743
NmuCI GTSAC 2 cut(s) 574, 1862
PciSI GCTCTTC 2 cut(s) 1277, 1944
PctI GAATGC 2 cut(s) 347, 665
PdiI GCCGGC 1 cut(s) 363
PdmI GAANNNNTTC 1 cut(s) 154
PfeI GAWTC 4 cut(s) 652, 676, 818, 1362
PflMI CCANNNNNTGG 1 cut(s) 872
PinAI ACCGGT 1 cut(s) 218
PkrI GCNGC 4 cut(s) 215, 1249, 1651, 1654
PleI GAGTC 4 cut(s) 305, 755, 1358, 1519
PpsI GAGTC 4 cut(s) 305, 755, 1358, 1519
PpuMI RGGWCCY 2 cut(s) 202, 369
Psp5II RGGWCCY 2 cut(s) 202, 369
Psp6I CCWGG 3 cut(s) 198, 690, 1886
PspFI CCCAGC 2 cut(s) 107, 1807
PspGI CCWGG 3 cut(s) 198, 690, 1886
PspN4I GGNNCC 7 cut(s) 20, 169, 370, 689, 956, 1414, 1827
PspPI GGNCC 3 cut(s) 202, 369, 688
PspPPI RGGWCCY 2 cut(s) 202, 369
PstNI CAGNNNCTG 1 cut(s) 1655
PsuI RGATCY 2 cut(s) 1401, 1412
PvuII CAGCTG 1 cut(s) 1655
RsaI GTAC 4 cut(s) 427, 454, 997, 1436
RsaNI GTAC 4 cut(s) 426, 453, 996, 1435
RseI CAYNNNNRTG 1 cut(s) 1820
SalI GTCGAC 2 cut(s) 1102, 1461
SapI GCTCTTC 2 cut(s) 1277, 1944
SaqAI TTAA 4 cut(s) 12, 1232, 1395, 1779
SatI GCNGC 4 cut(s) 214, 1248, 1650, 1653
Sau3AI GATC 8 cut(s) 509, 721, 798, 1080, 1401, 1412, 1452, 1596
Sau96I GGNCC 3 cut(s) 202, 369, 688
ScaI AGTACT 2 cut(s) 454, 997
SchI GAGTC 4 cut(s) 305, 756, 1359, 1520
ScrFI CCNGG 3 cut(s) 200, 692, 1888
SduI GDGCHC 4 cut(s) 193, 1077, 1729, 1919
SfaNI GCATC 4 cut(s) 555, 1120, 1279, 1480
SfcI CTRYAG 2 cut(s) 1354, 1738
SinI GGWCC 3 cut(s) 202, 369, 688
SmiMI CAYNNNNRTG 1 cut(s) 1820
SpeI ACTAGT 1 cut(s) 892
Sse9I AATT 8 cut(s) 44, 100, 529, 1032, 1093, 1664, 1793, 1967
SsiI CCGC 4 cut(s) 175, 579, 1202, 1557
SspI AATATT 1 cut(s) 706
SspMI CTAG 8 cut(s) 344, 356, 893, 1011, 1062, 1220, 1503, 1972
StyD4I CCNGG 3 cut(s) 198, 690, 1886
StyI CCWWGG 2 cut(s) 1407, 1569
TaaI ACNGT 3 cut(s) 69, 425, 1171
TaiI ACGT 5 cut(s) 126, 290, 302, 576, 1103
TaqI TCGA 7 cut(s) 477, 512, 549, 1103, 1462, 1474, 1578
TaqII GACCGA 1 cut(s) 1448
TasI AATT 8 cut(s) 44, 100, 529, 1032, 1093, 1664, 1793, 1967
TatI WGTACW 3 cut(s) 452, 995, 1434
TfiI GAWTC 4 cut(s) 652, 676, 818, 1362
Tru1I TTAA 4 cut(s) 12, 1232, 1395, 1779
Tru9I TTAA 4 cut(s) 12, 1232, 1395, 1779
TscAI CASTG 3 cut(s) 381, 610, 1956
TseFI GTSAC 2 cut(s) 574, 1862
TseI GCWGC 4 cut(s) 213, 1247, 1649, 1652
Tsp45I GTSAC 2 cut(s) 574, 1862
TspDTI ATGAA 7 cut(s) 78, 816, 852, 1258, 1320, 1354, 1698
TspGWI ACGGA 2 cut(s) 453, 550
TspRI CASTG 3 cut(s) 381, 610, 1956
Van91I CCANNNNNTGG 1 cut(s) 872
VneI GTGCAC 1 cut(s) 1073
VpaK11BI GGWCC 3 cut(s) 202, 369, 688
XapI RAATTY 1 cut(s) 1093
XcmI CCANNNNNNNNNTGG 2 cut(s) 139, 206
XmiI GTMKAC 3 cut(s) 778, 1103, 1462
XmnI GAANNNNTTC 1 cut(s) 154
XspI CTAG 8 cut(s) 344, 356, 893, 1011, 1062, 1220, 1503, 1972
ZrmI AGTACT 2 cut(s) 454, 997
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.