pycom08g04440

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Reverse (-)
3398300 .. 3399850
1551 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g04440.1

Sequence Viewer

Length: 1551 bp
ATGTCACACAGCAAAATTGTTTCCGTCGAGTTCGATACCCACTCAAACAGTTACTGGGATCCAGCCGGACCGCATGTTGGGATCAATATCAATAGAATCTCTTCTGTTGTTCATGCTAGTTGGAACTTTAGCGGCGATTATAATAAGAAGAAGGTGAATGTGTGGATAACTTACAATGCTACCACTAAAAACCTCAGTGTGTTCTGGACAAACAAGGAAAACCCTGTTTTCGTAGGCAATTCTTCTCTTTCTTACAATGTTGACCTACGCAAGTGCCTTCCCGATTTGGTTACAATTGGTTTTTCAGCTGCTACCGGACAATACCCCGAGCGGCACACGATATACTCATGGGATTTCAATTCAAGTTTGCATCCTGCACATGAGAAAAACAGGAAACACAAGCGGAAAGGAAAGAAGAAATGGTTGATAGTGGTCTTTGTGGCTTCCTTCTTGATTGTGGCGATTGGCGTGGCCTTAAGTTGTTTTGTTAAAAGGATTCTTGGATTGTTTGAGAACGGAAATCACAGCTCCAATGGATTGCAGTCTATAAGTGCGAAGCTTGAGGGACTAGCTGTCCCAAAAAGGTTTTCGTACGAAGAATTAGTCGTGGCCACTAATGACTTCGCGAAAGAAAGAAGGCTAGGCCAGGGAGGGTCAGGACAAGTTTATAAAGGGATCTTACAAGATCTTGGCTGCCTAGTTGCTGTTAAGAGAATCTTGACAGAATCCGAGCACTATGAGAAAATCTTCATCAATGAAGTGAAGATAATAAGCCACTTATTTCATCGAAATCTGGTTGAGTTCATTGGATGGTGTCACAAGAACGGAGAATGCTTGCTTGTTTATGCATACATGTCCAACGGCAGCCTTGACACACACCTGTTTGGTTCTCGAGTAACTCTGCAATGGGAATCCCGGTACAAGATAGCTTTAGGGTTGGCCTCGGCACTTCATTACCTACACGAAGAAGCAGAGCAATGTGTCCTTCACAGGGATATCAAATCAGCTAACGTACTGTTGGACGATAATTTCAGCACTAAGCTTGGTGATTTTGGTATTGCGAAGCTCGTGGATCCGCGATTCAGGAGTCAGACAACAGGGGTAGTAGGGACTTTCGGATACATGGCCCCAGAATATGCAAGCGGAGGGAGGGCCAGTAAAGAATCAGACATTTACAGTTTGGGAGTTGTAGCCTTGGAAATTGCATGTGGAAGGAGGACTTACCAAGATGGAGAGTATCACGTGCCACTTTTCCGGTGGGTTTGGCAGCTCTACCTTGCCGGAAATCTTCTCCATGTAGCCGATGAGAGATTAAATTTGAACTTTGATAGAAATGAAATGGAATGTTTGCTATTTGTGGGGTTATGGTGCACCCACCCCATGAAAACGGAAAGACCAAAAGCAGGGCAGGTGATAAAGGTTCTTCAGCTCGAAGCGCCGCTGCCAGAACTTCCACCAGACATGCATGACCATCATCCACTGCCTCAACCTCAACACGAAGCCGATTCAGCCTCTCACATATCTTTAACTTCTAGCTTGGATGGTCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

517

Amino Acids

58.13

Weight (kDa)

8.24

Isoelectric Point (pI)

43.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 3 - 133 1.4e-37 Legume lectin domain
Pkinase PF00069 209 - 411 1e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 210 - 410 1.1e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 141, 669
AarI CACCTGC 1 cut(s) 1399
Acc36I ACCTGC 1 cut(s) 1399
AccBSI CCGCTC 1 cut(s) 331
AccII CGCG 2 cut(s) 626, 1078
AciI CCGC 7 cut(s) 71, 132, 331, 403, 1076, 1143, 1439
AclWI GGATC 6 cut(s) 53, 66, 89, 683, 1067, 1080
AcoI YGGCCR 1 cut(s) 609
AcsI RAATTY 1 cut(s) 1315
AcuI CTGAAG 1 cut(s) 1409
AcvI CACGTG 1 cut(s) 1243
AfaI GTAC 3 cut(s) 593, 920, 1014
AfiI CCNNNNNNNGG 3 cut(s) 77, 991, 1403
AflII CTTAAG 1 cut(s) 475
AflIII ACRYGT 1 cut(s) 852
AgsI TTSAA 3 cut(s) 358, 363, 1321
AhdI GACNNNNNGTC 1 cut(s) 572
AjnI CCWGG 1 cut(s) 645
AjuI GAANNNNNNNTTGG 2 cut(s) 571, 603
Alw21I GWGCWC 2 cut(s) 735, 1373
Alw44I GTGCAC 1 cut(s) 1369
AlwI GGATC 6 cut(s) 53, 66, 89, 683, 1067, 1080
AlwNI CAGNNNCTG 1 cut(s) 54
Ama87I CYCGRG 2 cut(s) 326, 891
AoxI GGCC 6 cut(s) 471, 609, 643, 939, 1125, 1152
ApaLI GTGCAC 1 cut(s) 1369
ApeKI GCWGC 5 cut(s) 308, 693, 864, 1267, 1441
ApoI RAATTY 1 cut(s) 1315
ArsI GACNNNNNNTTYG 2 cut(s) 588, 620
Asp700I GAANNNNTTC 2 cut(s) 100, 746
AspLEI GCGC 1 cut(s) 1438
AspS9I GGNCC 3 cut(s) 68, 1126, 1152
AsuC2I CCSGG 1 cut(s) 916
AsuHPI GGTGA 3 cut(s) 166, 1058, 1423
AvaI CYCGRG 2 cut(s) 326, 891
AvaII GGWCC 1 cut(s) 68
BaeGI GKGCMC 1 cut(s) 1373
BalI TGGCCA 1 cut(s) 611
BamHI GGATCC 2 cut(s) 58, 1072
BauI CACGAG 1 cut(s) 1067
BbrPI CACGTG 1 cut(s) 1243
Bbv12I GWGCWC 2 cut(s) 735, 1373
BbvI GCAGC 5 cut(s) 295, 680, 876, 1279, 1428
BccI CCATC 4 cut(s) 804, 1223, 1479, 1535
BceAI ACGGC 1 cut(s) 877
BciT130I CCWGG 1 cut(s) 647
BciVI GTATCC 1 cut(s) 1112
BcnI CCSGG 1 cut(s) 916
BfaI CTAG 5 cut(s) 117, 569, 641, 698, 1533
BfoI RGCGCY 1 cut(s) 1439
BfrI CTTAAG 1 cut(s) 475
BfuAI ACCTGC 1 cut(s) 1399
BfuI GTATCC 1 cut(s) 1112
BglII AGATCT 1 cut(s) 685
BisI GCNGC 8 cut(s) 133, 309, 332, 694, 865, 1268, 1439, 1442
BlsI GCNGC 8 cut(s) 134, 310, 333, 695, 866, 1269, 1440, 1443
Bme1390I CCNGG 2 cut(s) 647, 916
Bme18I GGWCC 1 cut(s) 68
BmeRI GACNNNNNGTC 1 cut(s) 572
BmeT110I CYCGRG 2 cut(s) 326, 891
BmgT120I GGNCC 3 cut(s) 68, 1126, 1152
BmiI GGNNCC 3 cut(s) 60, 1074, 1128
BmrFI CCNGG 2 cut(s) 647, 916
BmrI ACTGGG 1 cut(s) 64
BmsI GCATC 1 cut(s) 379
BmuI ACTGGG 1 cut(s) 64
BpuEI CTTGAG 1 cut(s) 581
BpuMI CCSGG 1 cut(s) 916
BsaAI YACGTR 1 cut(s) 1243
BsaBI GATNNNNATC 1 cut(s) 86
BsaJI CCNNGG 3 cut(s) 646, 942, 1194
BsaWI WCCGGW 2 cut(s) 314, 1254
BsaXI ACNNNNNCTCC 2 cut(s) 1141, 1171
Bsc4I CCNNNNNNNGG 3 cut(s) 77, 991, 1403
Bse1I ACTGG 2 cut(s) 59, 1155
Bse3DI GCAATG 2 cut(s) 911, 983
Bse8I GATNNNNATC 1 cut(s) 86
BseBI CCWGG 1 cut(s) 647
BseDI CCNNGG 3 cut(s) 646, 942, 1194
BseGI GGATG 4 cut(s) 370, 815, 1474, 1546
BseJI GATNNNNATC 1 cut(s) 86
BseLI CCNNNNNNNGG 3 cut(s) 77, 991, 1403
BseMI GCAATG 2 cut(s) 911, 983
BseMII CTCAG 1 cut(s) 208
BseNI ACTGG 2 cut(s) 59, 1155
BseSI GKGCMC 1 cut(s) 1373
BseXI GCAGC 5 cut(s) 295, 680, 876, 1279, 1428
BsgI GTGCAG 1 cut(s) 360
Bsh1236I CGCG 2 cut(s) 626, 1078
BshFI GGCC 6 cut(s) 473, 611, 645, 941, 1127, 1154
BsiHKAI GWGCWC 2 cut(s) 735, 1373
BsiHKCI CYCGRG 2 cut(s) 326, 891
BsiSI CCGG 5 cut(s) 66, 315, 916, 1255, 1281
BsiWI CGTACG 1 cut(s) 591
BslFI GGGAC 3 cut(s) 560, 579, 1123
BslI CCNNNNNNNGG 3 cut(s) 77, 991, 1403
BsmFI GGGAC 3 cut(s) 560, 579, 1123
BsmI GAATGC 1 cut(s) 836
BsnI GGCC 6 cut(s) 473, 611, 645, 941, 1127, 1154
BsoBI CYCGRG 2 cut(s) 326, 891
Bsp1286I GDGCHC 2 cut(s) 735, 1373
Bsp143I GATC 5 cut(s) 58, 81, 675, 685, 1072
Bsp68I TCGCGA 1 cut(s) 626
BspACI CCGC 7 cut(s) 71, 132, 331, 403, 1076, 1143, 1439
BspANI GGCC 6 cut(s) 473, 611, 645, 941, 1127, 1154
BspCNI CTCAG 1 cut(s) 207
BspFNI CGCG 2 cut(s) 626, 1078
BspLI GGNNCC 3 cut(s) 60, 1074, 1128
BspMI ACCTGC 1 cut(s) 1399
BspPI GGATC 6 cut(s) 53, 66, 89, 683, 1067, 1080
BspTI CTTAAG 1 cut(s) 475
BsrBI CCGCTC 1 cut(s) 331
BsrDI GCAATG 2 cut(s) 911, 983
BsrI ACTGG 2 cut(s) 59, 1155
BssECI CCNNGG 3 cut(s) 646, 942, 1194
BssMI GATC 5 cut(s) 58, 81, 675, 685, 1072
BssSI CACGAG 1 cut(s) 1067
BssT1I CCWWGG 1 cut(s) 1194
Bst2BI CACGAG 1 cut(s) 1067
Bst2UI CCWGG 1 cut(s) 647
Bst4CI ACNGT 3 cut(s) 50, 1017, 1178
Bst6I CTCTTC 1 cut(s) 106
BstAFI CTTAAG 1 cut(s) 475
BstBAI YACGTR 1 cut(s) 1243
BstC8I GCNNGC 2 cut(s) 836, 1141
BstDEI CTNAG 2 cut(s) 194, 1038
BstF5I GGATG 4 cut(s) 370, 815, 1474, 1546
BstFNI CGCG 2 cut(s) 626, 1078
BstH2I RGCGCY 1 cut(s) 1439
BstHHI GCGC 1 cut(s) 1438
BstKTI GATC 5 cut(s) 61, 84, 678, 688, 1075
BstMBI GATC 5 cut(s) 58, 81, 675, 685, 1072
BstMWI GCNNNNNNNGC 2 cut(s) 1435, 1508
BstNI CCWGG 1 cut(s) 647
BstNSI RCATGY 4 cut(s) 77, 856, 1209, 1465
BstSCI CCNGG 2 cut(s) 645, 914
BstSLI GKGCMC 1 cut(s) 1373
BstUI CGCG 2 cut(s) 626, 1078
BstV1I GCAGC 5 cut(s) 295, 680, 876, 1279, 1428
BstX2I RGATCY 4 cut(s) 58, 675, 685, 1072
BstYI RGATCY 4 cut(s) 58, 675, 685, 1072
BsuI GTATCC 1 cut(s) 1112
BsuRI GGCC 6 cut(s) 473, 611, 645, 941, 1127, 1154
BtsCI GGATG 4 cut(s) 370, 815, 1474, 1546
BtsI GCAGTG 1 cut(s) 1478
BtsIMutI CAGTG 2 cut(s) 202, 1478
BtuMI TCGCGA 1 cut(s) 626
BveI ACCTGC 1 cut(s) 1399
Cac8I GCNNGC 2 cut(s) 836, 1141
CaiI CAGNNNCTG 1 cut(s) 54
CfoI GCGC 1 cut(s) 1438
Cfr13I GGNCC 3 cut(s) 68, 1126, 1152
CpoI CGGWCCG 1 cut(s) 68
Csp6I GTAC 3 cut(s) 592, 919, 1013
CspI CGGWCCG 1 cut(s) 68
CviQI GTAC 3 cut(s) 592, 919, 1013
DdeI CTNAG 2 cut(s) 194, 1038
DpnI GATC 5 cut(s) 60, 83, 677, 687, 1074
DpnII GATC 5 cut(s) 58, 81, 675, 685, 1072
DriI GACNNNNNGTC 1 cut(s) 572
EaeI YGGCCR 1 cut(s) 609
Eam1104I CTCTTC 1 cut(s) 106
Eam1105I GACNNNNNGTC 1 cut(s) 572
EarI CTCTTC 1 cut(s) 106
Eco130I CCWWGG 1 cut(s) 1194
Eco32I GATATC 1 cut(s) 997
Eco47I GGWCC 1 cut(s) 68
Eco57I CTGAAG 1 cut(s) 1409
Eco72I CACGTG 1 cut(s) 1243
Eco88I CYCGRG 2 cut(s) 326, 891
EcoRII CCWGG 1 cut(s) 645
EcoRV GATATC 1 cut(s) 997
EcoT14I CCWWGG 1 cut(s) 1194
EcoT22I ATGCAT 2 cut(s) 850, 1467
ErhI CCWWGG 1 cut(s) 1194
FalI AAGNNNNNCTT 4 cut(s) 701, 733, 1204, 1236
FaqI GGGAC 3 cut(s) 560, 579, 1123
Fnu4HI GCNGC 8 cut(s) 133, 309, 332, 694, 865, 1268, 1439, 1442
FokI GGATG 3 cut(s) 357, 822, 1461
Fsp4HI GCNGC 8 cut(s) 133, 309, 332, 694, 865, 1268, 1439, 1442
FspBI CTAG 5 cut(s) 117, 569, 641, 698, 1533
GlaI GCGC 1 cut(s) 1437
GluI GCNGC 8 cut(s) 133, 309, 332, 694, 865, 1268, 1439, 1442
HaeII RGCGCY 1 cut(s) 1439
HaeIII GGCC 6 cut(s) 473, 611, 645, 941, 1127, 1154
HapII CCGG 5 cut(s) 66, 315, 916, 1255, 1281
HhaI GCGC 1 cut(s) 1438
Hin6I GCGC 1 cut(s) 1436
HinP1I GCGC 1 cut(s) 1436
HincII GTYRAC 1 cut(s) 262
HindII GTYRAC 1 cut(s) 262
HindIII AAGCTT 2 cut(s) 557, 1040
HinfI GANTC 9 cut(s) 96, 496, 714, 725, 911, 1080, 1087, 1163, 1505
HpaII CCGG 5 cut(s) 66, 315, 916, 1255, 1281
HphI GGTGA 3 cut(s) 166, 1058, 1423
Hpy166II GTNNAC 2 cut(s) 262, 1371
Hpy188I TCNGA 4 cut(s) 730, 1092, 1118, 1168
Hpy188III TCNNGA 8 cut(s) 205, 281, 451, 625, 657, 718, 891, 1084
Hpy8I GTNNAC 2 cut(s) 262, 1371
Hpy99I CGWCG 1 cut(s) 29
HpyAV CCTTC 6 cut(s) 145, 287, 457, 630, 995, 1206
HpyCH4III ACNGT 3 cut(s) 50, 1017, 1178
HpyCH4IV ACGT 2 cut(s) 1011, 1242
HpyCH4V TGCA 9 cut(s) 370, 377, 541, 848, 904, 1139, 1205, 1371, 1465
HpyF10VI GCNNNNNNNGC 2 cut(s) 1435, 1508
HpyF3I CTNAG 2 cut(s) 194, 1038
HpySE526I ACGT 2 cut(s) 1011, 1242
HspAI GCGC 1 cut(s) 1436
Kzo9I GATC 5 cut(s) 58, 81, 675, 685, 1072
LmnI GCTCC 1 cut(s) 533
Lsp1109I GCAGC 5 cut(s) 295, 680, 876, 1279, 1428
LweI GCATC 1 cut(s) 379
MaeI CTAG 5 cut(s) 117, 569, 641, 698, 1533
MaeII ACGT 2 cut(s) 1011, 1242
MaeIII GTNAC 5 cut(s) 3, 50, 289, 815, 895
MalI GATC 5 cut(s) 60, 83, 677, 687, 1074
MbiI CCGCTC 1 cut(s) 331
MboI GATC 5 cut(s) 58, 81, 675, 685, 1072
MfeI CAATTG 1 cut(s) 294
MflI RGATCY 4 cut(s) 58, 675, 685, 1072
MhlI GDGCHC 2 cut(s) 735, 1373
MlsI TGGCCA 1 cut(s) 611
MluCI AATT 8 cut(s) 15, 238, 294, 358, 599, 1027, 1200, 1315
MluNI TGGCCA 1 cut(s) 611
MlyI GAGTC 1 cut(s) 1096
MmeI TCCRAC 3 cut(s) 101, 882, 999
Mox20I TGGCCA 1 cut(s) 611
Mph1103I ATGCAT 2 cut(s) 850, 1467
MroXI GAANNNNTTC 2 cut(s) 100, 746
MscI TGGCCA 1 cut(s) 611
MseI TTAA 5 cut(s) 476, 489, 708, 1313, 1526
Msp20I TGGCCA 1 cut(s) 611
MspA1I CMGCKG 2 cut(s) 308, 1441
MspCI CTTAAG 1 cut(s) 475
MspI CCGG 5 cut(s) 66, 315, 916, 1255, 1281
MspR9I CCNGG 2 cut(s) 647, 916
MunI CAATTG 1 cut(s) 294
Mva1269I GAATGC 1 cut(s) 836
MvaI CCWGG 1 cut(s) 647
MvnI CGCG 2 cut(s) 626, 1078
MwoI GCNNNNNNNGC 2 cut(s) 1435, 1508
NciI CCSGG 1 cut(s) 916
NdeII GATC 5 cut(s) 58, 81, 675, 685, 1072
NlaIV GGNNCC 3 cut(s) 60, 1074, 1128
NmeAIII GCCGAG 1 cut(s) 923
NmuCI GTSAC 2 cut(s) 3, 815
NruI TCGCGA 1 cut(s) 626
NsiI ATGCAT 2 cut(s) 850, 1467
NspI RCATGY 4 cut(s) 77, 856, 1209, 1465
PaeR7I CTCGAG 1 cut(s) 891
PaqCI CACCTGC 1 cut(s) 1399
PciI ACATGT 1 cut(s) 852
PctI GAATGC 1 cut(s) 836
PdmI GAANNNNTTC 2 cut(s) 100, 746
PfeI GAWTC 8 cut(s) 96, 496, 714, 725, 911, 1080, 1163, 1505
Pfl23II CGTACG 1 cut(s) 591
PkrI GCNGC 8 cut(s) 134, 310, 333, 695, 866, 1269, 1440, 1443
PleI GAGTC 1 cut(s) 1095
PmaCI CACGTG 1 cut(s) 1243
PmlI CACGTG 1 cut(s) 1243
PpsI GAGTC 1 cut(s) 1095
Ppu21I YACGTR 1 cut(s) 1243
PscI ACATGT 1 cut(s) 852
PsiI TTATAA 2 cut(s) 141, 669
Psp6I CCWGG 1 cut(s) 645
PspCI CACGTG 1 cut(s) 1243
PspGI CCWGG 1 cut(s) 645
PspLI CGTACG 1 cut(s) 591
PspN4I GGNNCC 3 cut(s) 60, 1074, 1128
PspPI GGNCC 3 cut(s) 68, 1126, 1152
PstNI CAGNNNCTG 1 cut(s) 54
PsuI RGATCY 4 cut(s) 58, 675, 685, 1072
PvuII CAGCTG 1 cut(s) 308
RruI TCGCGA 1 cut(s) 626
RsaI GTAC 3 cut(s) 593, 920, 1014
RsaNI GTAC 3 cut(s) 592, 919, 1013
Rsr2I CGGWCCG 1 cut(s) 68
RsrII CGGWCCG 1 cut(s) 68
SaqAI TTAA 5 cut(s) 476, 489, 708, 1313, 1526
SatI GCNGC 8 cut(s) 133, 309, 332, 694, 865, 1268, 1439, 1442
Sau3AI GATC 5 cut(s) 58, 81, 675, 685, 1072
Sau96I GGNCC 3 cut(s) 68, 1126, 1152
SchI GAGTC 1 cut(s) 1096
ScrFI CCNGG 2 cut(s) 647, 916
SduI GDGCHC 2 cut(s) 735, 1373
SfaNI GCATC 1 cut(s) 379
Sfr274I CTCGAG 1 cut(s) 891
SinI GGWCC 1 cut(s) 68
SlaI CTCGAG 1 cut(s) 891
SmlI CTYRAG 3 cut(s) 475, 560, 891
SmoI CTYRAG 3 cut(s) 475, 560, 891
Sse9I AATT 8 cut(s) 15, 238, 294, 358, 599, 1027, 1200, 1315
SsiI CCGC 7 cut(s) 71, 132, 331, 403, 1076, 1143, 1439
SspMI CTAG 5 cut(s) 117, 569, 641, 698, 1533
StyD4I CCNGG 2 cut(s) 645, 914
StyI CCWWGG 1 cut(s) 1194
TaaI ACNGT 3 cut(s) 50, 1017, 1178
TaiI ACGT 2 cut(s) 1014, 1245
TaqI TCGA 5 cut(s) 27, 33, 787, 892, 1431
TasI AATT 8 cut(s) 15, 238, 294, 358, 599, 1027, 1200, 1315
TauI GCSGC 3 cut(s) 135, 334, 1441
TfiI GAWTC 8 cut(s) 96, 496, 714, 725, 911, 1080, 1163, 1505
Tru1I TTAA 5 cut(s) 476, 489, 708, 1313, 1526
Tru9I TTAA 5 cut(s) 476, 489, 708, 1313, 1526
TscAI CASTG 2 cut(s) 202, 1485
TseFI GTSAC 2 cut(s) 3, 815
TseI GCWGC 5 cut(s) 308, 693, 864, 1267, 1441
Tsp45I GTSAC 2 cut(s) 3, 815
TspDTI ATGAA 8 cut(s) 101, 739, 771, 773, 793, 941, 1350, 1397
TspGWI ACGGA 4 cut(s) 13, 531, 840, 1403
TspRI CASTG 2 cut(s) 202, 1485
Vha464I CTTAAG 1 cut(s) 475
VneI GTGCAC 1 cut(s) 1369
VpaK11BI GGWCC 1 cut(s) 68
XapI RAATTY 1 cut(s) 1315
XceI RCATGY 4 cut(s) 77, 856, 1209, 1465
XcmI CCANNNNNNNNNTGG 1 cut(s) 1254
XhoI CTCGAG 1 cut(s) 891
XmnI GAANNNNTTC 2 cut(s) 100, 746
XspI CTAG 5 cut(s) 117, 569, 641, 698, 1533
Zsp2I ATGCAT 2 cut(s) 850, 1467
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.