MD11G1253600.v1.1

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Reverse (-)
36597081 .. 36599973
2893 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1253600.v1.1.491

Sequence Viewer

Length: 1380 bp
ATGAAGTTGTTGCGCATAAGGTTGTGTTCGTCGCAGGAATCTCCTGGCAGACGAGCACACAGCTCCCCTGGGAGAATGGCGTCGGTTGAGGACGGCTTCAGCTTGGGTTCCTGTAGCAATGGCGGTTGCCCGAATGCGGTGGCCTTTGTAATTTGTGCCCAGCCGAAAGCCTCTTTCCTGCCTCCTAAGTTTTCCTCTGGGCCTTGGGTTTGGGCCGACTTTCTCTCTGGCCCAAAGTTCAGATTTTATCCCAAACAGGTTGTCTCATGGAATTTTGCTTCAACTGCTCTAGTTGATTTGGATGAAACATACAACACACCACTAATTCCTGCACCAAGCCCCGGTGTTCAACCCAAGTCAGGAAATGCCAATAGTAGACTTCCGATTGGTTTGGGTGTTGGCAGGTCTCTAATCTTGGTTGGTGGGTTGGGTTTGGTTTGGTTCATTTTTTGCAAGAAGAGGAAAGCAGTTGAGGAACGTGATGAGAATCCTTTTGTTAATAACTTGATTGATGAGGAAATTGAAATGGGGGCTGGTCCGAGGAAGTTCTCTTACCGCGAGTTGGCTCAAGCGACAAGTAATTTTGAGGAGGGCAAGAAGTTGGGAGAGGGAGGATTCGAAGTGGTTTATAAGGGCTTCATAAAAGACTTACACTCATATTTTGCTGTAAAGAAGATATCCAGCGGATCTAAACAAGGGTTGAAGGAGTATGCATCAGAAGTAAGGATCATCAGTAGGCTTAGACACCAGAATTTGGTACAACGTATTGGTTGGTGCCATGAAGAGAGCAAACTACTACTCGTCTATGATGTTATGCTGGATTCAAACTTCAATGTAAAACTTGGCGATTTCAGGTTAGCTCGACTTGTGGACCATGGAAAACAGTCACAGACAACAGTTGTGGCGGGAACCAGGGGCTACATGTCTCTGGAATATATTACCACAGGAAAGGCTAGCAAGGAATCAGATGTCTACAGCTTTGGAGTTGTTGCTTTGGAAATAGCCTGCGGGAGAAAATCCATGGATCTCAGTTTAGAAAGTAGTCAAATTGAAATAGTGGAGTGGGTCTGGGAGCTTTACGGAGAAGGGAAATTTTTTCAAGCAGGCGATCCAAAACTCAACGGACATTTTGATGAGGAAAAGATGGAGCGCTTGATGATTGTTGGGCTGTGGTGTGCTCACCCGGATTTTCAATTCAGACTTTCTATACAACAAGCGATTCAAGTGCTTAACTCCAAAGTTGCATTGCCTAATCTCCCATCAAAGATGCCGGTGGCCACCTATTTCGCTTCTGCAACATCACTCTCAACTTTTTCCACTGAGACTATTAGTTCAGAAAGAGGTCAAACAAATTCTCAGGATATTGTTAAAGCACTCTAA

Protein Analysis

460

Amino Acids

50.82

Weight (kDa)

8.62

Isoelectric Point (pI)

41.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 195 - 273 3.3e-11 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 197 - 272 7.5e-09 Protein tyrosine and serine/threonine kinase
PK_Tyr_Ser-Thr PF07714 270 - 340 4.6e-11 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 271 - 408 4.5e-12 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 630
Acc16I TGCGCA 1 cut(s) 14
Acc36I ACCTGC 1 cut(s) 393
AccB1I GGYRCC 1 cut(s) 774
AccB7I CCANNNNNTGG 1 cut(s) 754
AccI GTMKAC 2 cut(s) 376, 972
AccII CGCG 1 cut(s) 558
AciI CCGC 6 cut(s) 123, 137, 556, 684, 905, 1008
AclWI GGATC 4 cut(s) 694, 734, 1032, 1103
AcoI YGGCCR 1 cut(s) 1275
AcsI RAATTY 4 cut(s) 271, 751, 1091, 1351
AcuI CTGAAG 1 cut(s) 82
AcyI GRCGYC 1 cut(s) 80
AfaI GTAC 1 cut(s) 759
AfeI AGCGCT 1 cut(s) 1151
AfiI CCNNNNNNNGG 5 cut(s) 136, 341, 359, 562, 754
AflIII ACRYGT 1 cut(s) 921
AjnI CCWGG 3 cut(s) 43, 67, 911
AluBI AGCT 5 cut(s) 63, 102, 860, 978, 1075
AluI AGCT 5 cut(s) 63, 102, 860, 978, 1075
Alw21I GWGCWC 2 cut(s) 58, 1180
Alw26I GTCTC 4 cut(s) 268, 411, 930, 1316
AlwI GGATC 4 cut(s) 694, 734, 1032, 1103
Aor51HI AGCGCT 1 cut(s) 1151
AoxI GGCC 5 cut(s) 141, 200, 213, 229, 1275
ApoI RAATTY 4 cut(s) 271, 751, 1091, 1351
ArsI GACNNNNNNTTYG 2 cut(s) 246, 278
AspLEI GCGC 2 cut(s) 15, 1152
AspS9I GGNCC 5 cut(s) 200, 213, 230, 536, 871
AsuC2I CCSGG 2 cut(s) 342, 1184
AsuHPI GGTGA 1 cut(s) 1172
AsuII TTCGAA 1 cut(s) 618
AsuNHI GCTAGC 1 cut(s) 953
AvaII GGWCC 2 cut(s) 536, 871
BaeGI GKGCMC 1 cut(s) 160
BalI TGGCCA 1 cut(s) 1277
BanI GGYRCC 1 cut(s) 774
BarI GAAGNNNNNNTAC 2 cut(s) 536, 568
Bbv12I GWGCWC 2 cut(s) 58, 1180
BccI CCATC 2 cut(s) 1138, 1267
BceAI ACGGC 1 cut(s) 109
BcgI CGANNNNNNTGC 2 cut(s) 1207, 1241
BciT130I CCWGG 3 cut(s) 45, 69, 913
BcnI CCSGG 2 cut(s) 342, 1184
BcoDI GTCTC 4 cut(s) 268, 411, 930, 1316
BfaI CTAG 2 cut(s) 290, 954
BfmI CTRYAG 2 cut(s) 112, 973
BfoI RGCGCY 1 cut(s) 1153
BfuAI ACCTGC 1 cut(s) 393
Bme1390I CCNGG 5 cut(s) 45, 69, 342, 913, 1184
Bme18I GGWCC 2 cut(s) 536, 871
BmgT120I GGNCC 5 cut(s) 200, 213, 230, 536, 871
BmiI GGNNCC 3 cut(s) 109, 776, 910
BmrFI CCNGG 5 cut(s) 45, 69, 342, 913, 1184
BmsI GCATC 2 cut(s) 722, 1257
BmtI GCTAGC 1 cut(s) 957
Bpu14I TTCGAA 1 cut(s) 618
BpuEI CTTGAG 1 cut(s) 552
BpuMI CCSGG 2 cut(s) 342, 1184
BsaBI GATNNNNATC 1 cut(s) 486
BsaHI GRCGYC 1 cut(s) 80
BsaI GGTCTC 1 cut(s) 411
BsaJI CCNNGG 8 cut(s) 67, 68, 203, 340, 539, 874, 912, 1020
Bsc4I CCNNNNNNNGG 5 cut(s) 136, 341, 359, 562, 754
Bse118I RCCGGY 1 cut(s) 1270
Bse3DI GCAATG 2 cut(s) 124, 1244
Bse8I GATNNNNATC 1 cut(s) 486
BseBI CCWGG 3 cut(s) 45, 69, 913
BseDI CCNNGG 8 cut(s) 67, 68, 203, 340, 539, 874, 912, 1020
BseGI GGATG 1 cut(s) 307
BseJI GATNNNNATC 1 cut(s) 486
BseLI CCNNNNNNNGG 5 cut(s) 136, 341, 359, 562, 754
BseMI GCAATG 2 cut(s) 124, 1244
BseMII CTCAG 3 cut(s) 1042, 1311, 1370
BseRI GAGGAG 1 cut(s) 602
BseSI GKGCMC 1 cut(s) 160
BseYI CCCAGC 1 cut(s) 159
BsgI GTGCAG 1 cut(s) 315
Bsh1236I CGCG 1 cut(s) 558
BshFI GGCC 5 cut(s) 143, 202, 215, 231, 1277
BshNI GGYRCC 1 cut(s) 774
BsiHKAI GWGCWC 2 cut(s) 58, 1180
BsiSI CCGG 3 cut(s) 342, 1184, 1271
BslI CCNNNNNNNGG 5 cut(s) 136, 341, 359, 562, 754
BsmAI GTCTC 4 cut(s) 268, 411, 930, 1316
BsmI GAATGC 1 cut(s) 139
BsnI GGCC 5 cut(s) 143, 202, 215, 231, 1277
Bso31I GGTCTC 1 cut(s) 411
Bsp119I TTCGAA 1 cut(s) 618
Bsp1286I GDGCHC 3 cut(s) 58, 160, 1180
Bsp143I GATC 4 cut(s) 686, 726, 1024, 1108
Bsp19I CCATGG 2 cut(s) 874, 1020
BspACI CCGC 6 cut(s) 123, 137, 556, 684, 905, 1008
BspANI GGCC 5 cut(s) 143, 202, 215, 231, 1277
BspCNI CTCAG 3 cut(s) 1041, 1312, 1369
BspFNI CGCG 1 cut(s) 558
BspLI GGNNCC 3 cut(s) 109, 776, 910
BspMI ACCTGC 1 cut(s) 393
BspOI GCTAGC 1 cut(s) 957
BspPI GGATC 4 cut(s) 694, 734, 1032, 1103
BspT104I TTCGAA 1 cut(s) 618
BspT107I GGYRCC 1 cut(s) 774
BspTNI GGTCTC 1 cut(s) 411
BsrDI GCAATG 2 cut(s) 124, 1244
BsrFI RCCGGY 1 cut(s) 1270
BssAI RCCGGY 1 cut(s) 1270
BssECI CCNNGG 8 cut(s) 67, 68, 203, 340, 539, 874, 912, 1020
BssMI GATC 4 cut(s) 686, 726, 1024, 1108
BssNI GRCGYC 1 cut(s) 80
BssT1I CCWWGG 3 cut(s) 203, 874, 1020
Bst2UI CCWGG 3 cut(s) 45, 69, 913
Bst4CI ACNGT 2 cut(s) 885, 898
Bst6I CTCTTC 2 cut(s) 452, 777
BstACI GRCGYC 1 cut(s) 80
BstBI TTCGAA 1 cut(s) 618
BstC8I GCNNGC 3 cut(s) 955, 1006, 1105
BstDEI CTNAG 5 cut(s) 186, 740, 1028, 1320, 1356
BstDSI CCRYGG 2 cut(s) 874, 1020
BstF5I GGATG 1 cut(s) 307
BstFNI CGCG 1 cut(s) 558
BstH2I RGCGCY 1 cut(s) 1153
BstHHI GCGC 2 cut(s) 15, 1152
BstKTI GATC 4 cut(s) 689, 729, 1027, 1111
BstMAI GTCTC 4 cut(s) 268, 411, 930, 1316
BstMBI GATC 4 cut(s) 686, 726, 1024, 1108
BstMWI GCNNNNNNNGC 1 cut(s) 284
BstNI CCWGG 3 cut(s) 45, 69, 913
BstNSI RCATGY 1 cut(s) 925
BstSCI CCNGG 5 cut(s) 43, 67, 340, 911, 1182
BstSFI CTRYAG 2 cut(s) 112, 973
BstSLI GKGCMC 1 cut(s) 160
BstUI CGCG 1 cut(s) 558
BstX2I RGATCY 2 cut(s) 686, 1024
BstYI RGATCY 2 cut(s) 686, 1024
BsuRI GGCC 5 cut(s) 143, 202, 215, 231, 1277
BtgI CCRYGG 2 cut(s) 874, 1020
BtsCI GGATG 1 cut(s) 307
BtsIMutI CAGTG 1 cut(s) 1317
BveI ACCTGC 1 cut(s) 393
Cac8I GCNNGC 3 cut(s) 955, 1006, 1105
CfoI GCGC 2 cut(s) 15, 1152
Cfr10I RCCGGY 1 cut(s) 1270
Cfr13I GGNCC 5 cut(s) 200, 213, 230, 536, 871
CseI GACGC 1 cut(s) 69
Csp6I GTAC 1 cut(s) 758
CspCI CAANNNNNGTGG 2 cut(s) 882, 917
CviAII CATG 5 cut(s) 267, 779, 875, 922, 1021
CviQI GTAC 1 cut(s) 758
DdeI CTNAG 5 cut(s) 186, 740, 1028, 1320, 1356
DpnI GATC 4 cut(s) 688, 728, 1026, 1110
DpnII GATC 4 cut(s) 686, 726, 1024, 1108
EaeI YGGCCR 1 cut(s) 1275
Eam1104I CTCTTC 2 cut(s) 452, 777
EarI CTCTTC 2 cut(s) 452, 777
Eco130I CCWWGG 3 cut(s) 203, 874, 1020
Eco31I GGTCTC 1 cut(s) 411
Eco32I GATATC 1 cut(s) 678
Eco47I GGWCC 2 cut(s) 536, 871
Eco47III AGCGCT 1 cut(s) 1151
Eco57I CTGAAG 1 cut(s) 82
EcoRII CCWGG 3 cut(s) 43, 67, 911
EcoRV GATATC 1 cut(s) 678
EcoT14I CCWWGG 3 cut(s) 203, 874, 1020
EcoT22I ATGCAT 1 cut(s) 715
ErhI CCWWGG 3 cut(s) 203, 874, 1020
FaeI CATG 5 cut(s) 270, 782, 878, 925, 1024
FatI CATG 5 cut(s) 266, 778, 874, 921, 1020
FauI CCCGC 2 cut(s) 898, 1001
FblI GTMKAC 2 cut(s) 376, 972
FokI GGATG 1 cut(s) 314
FspBI CTAG 2 cut(s) 290, 954
FspI TGCGCA 1 cut(s) 14
GlaI GCGC 2 cut(s) 14, 1151
GsaI CCCAGC 1 cut(s) 163
HaeII RGCGCY 1 cut(s) 1153
HaeIII GGCC 5 cut(s) 143, 202, 215, 231, 1277
HapII CCGG 3 cut(s) 342, 1184, 1271
HgaI GACGC 1 cut(s) 69
HhaI GCGC 2 cut(s) 15, 1152
Hin1I GRCGYC 1 cut(s) 80
Hin1II CATG 5 cut(s) 270, 782, 878, 925, 1024
Hin6I GCGC 2 cut(s) 13, 1150
HinP1I GCGC 2 cut(s) 13, 1150
HinfI GANTC 6 cut(s) 38, 487, 615, 821, 962, 1219
HpaII CCGG 3 cut(s) 342, 1184, 1271
HphI GGTGA 1 cut(s) 1172
Hpy166II GTNNAC 3 cut(s) 377, 871, 973
Hpy188I TCNGA 7 cut(s) 242, 384, 540, 718, 967, 1199, 1336
Hpy188III TCNNGA 3 cut(s) 360, 929, 1358
Hpy8I GTNNAC 3 cut(s) 377, 871, 973
Hpy99I CGWCG 2 cut(s) 34, 85
HpyAV CCTTC 2 cut(s) 697, 1079
HpyCH4III ACNGT 2 cut(s) 885, 898
HpyCH4IV ACGT 2 cut(s) 478, 763
HpyCH4V TGCA 5 cut(s) 332, 453, 713, 1244, 1295
HpyF10VI GCNNNNNNNGC 1 cut(s) 284
HpyF3I CTNAG 5 cut(s) 186, 740, 1028, 1320, 1356
HpySE526I ACGT 2 cut(s) 478, 763
Hsp92I GRCGYC 1 cut(s) 80
Hsp92II CATG 5 cut(s) 270, 782, 878, 925, 1024
HspAI GCGC 2 cut(s) 13, 1150
Kzo9I GATC 4 cut(s) 686, 726, 1024, 1108
LmnI GCTCC 3 cut(s) 68, 1072, 1147
LweI GCATC 2 cut(s) 722, 1257
MaeI CTAG 2 cut(s) 290, 954
MaeII ACGT 2 cut(s) 478, 763
MaeIII GTNAC 1 cut(s) 885
MalI GATC 4 cut(s) 688, 728, 1026, 1110
MboI GATC 4 cut(s) 686, 726, 1024, 1108
MboII GAAGA 3 cut(s) 469, 685, 794
MflI RGATCY 2 cut(s) 686, 1024
MhlI GDGCHC 3 cut(s) 58, 160, 1180
MlsI TGGCCA 1 cut(s) 1277
MluNI TGGCCA 1 cut(s) 1277
Mox20I TGGCCA 1 cut(s) 1277
Mph1103I ATGCAT 1 cut(s) 715
MscI TGGCCA 1 cut(s) 1277
MseI TTAA 3 cut(s) 498, 1230, 1368
MslI CAYNNNNRTG 1 cut(s) 1131
Msp20I TGGCCA 1 cut(s) 1277
MspA1I CMGCKG 1 cut(s) 684
MspI CCGG 3 cut(s) 342, 1184, 1271
MspR9I CCNGG 5 cut(s) 45, 69, 342, 913, 1184
Mva1269I GAATGC 1 cut(s) 139
MvaI CCWGG 3 cut(s) 45, 69, 913
MvnI CGCG 1 cut(s) 558
MwoI GCNNNNNNNGC 1 cut(s) 284
NciI CCSGG 2 cut(s) 342, 1184
NcoI CCATGG 2 cut(s) 874, 1020
NdeII GATC 4 cut(s) 686, 726, 1024, 1108
NheI GCTAGC 1 cut(s) 953
NlaIII CATG 5 cut(s) 270, 782, 878, 925, 1024
NlaIV GGNNCC 3 cut(s) 109, 776, 910
NmuCI GTSAC 1 cut(s) 885
NsbI TGCGCA 1 cut(s) 14
NsiI ATGCAT 1 cut(s) 715
NspI RCATGY 1 cut(s) 925
NspV TTCGAA 1 cut(s) 618
PasI CCCWGGG 1 cut(s) 68
PciI ACATGT 1 cut(s) 921
PctI GAATGC 1 cut(s) 139
PfeI GAWTC 6 cut(s) 38, 487, 615, 821, 962, 1219
PflMI CCANNNNNTGG 1 cut(s) 754
PscI ACATGT 1 cut(s) 921
PsiI TTATAA 1 cut(s) 630
Psp6I CCWGG 3 cut(s) 43, 67, 911
PspFI CCCAGC 1 cut(s) 159
PspGI CCWGG 3 cut(s) 43, 67, 911
PspN4I GGNNCC 3 cut(s) 109, 776, 910
PspPI GGNCC 5 cut(s) 200, 213, 230, 536, 871
PsuI RGATCY 2 cut(s) 686, 1024
RsaI GTAC 1 cut(s) 759
RsaNI GTAC 1 cut(s) 758
RseI CAYNNNNRTG 1 cut(s) 1131
SaqAI TTAA 3 cut(s) 498, 1230, 1368
Sau3AI GATC 4 cut(s) 686, 726, 1024, 1108
Sau96I GGNCC 5 cut(s) 200, 213, 230, 536, 871
ScrFI CCNGG 5 cut(s) 45, 69, 342, 913, 1184
SduI GDGCHC 3 cut(s) 58, 160, 1180
SfaNI GCATC 2 cut(s) 722, 1257
SfcI CTRYAG 2 cut(s) 112, 973
SfuI TTCGAA 1 cut(s) 618
SinI GGWCC 2 cut(s) 536, 871
SmiMI CAYNNNNRTG 1 cut(s) 1131
SmlI CTYRAG 1 cut(s) 567
SmoI CTYRAG 1 cut(s) 567
SsiI CCGC 6 cut(s) 123, 137, 556, 684, 905, 1008
SspMI CTAG 2 cut(s) 290, 954
StyD4I CCNGG 5 cut(s) 43, 67, 340, 911, 1182
StyI CCWWGG 3 cut(s) 203, 874, 1020
TaaI ACNGT 2 cut(s) 885, 898
TaiI ACGT 2 cut(s) 481, 766
TaqI TCGA 2 cut(s) 618, 862
TfiI GAWTC 6 cut(s) 38, 487, 615, 821, 962, 1219
Tru1I TTAA 3 cut(s) 498, 1230, 1368
Tru9I TTAA 3 cut(s) 498, 1230, 1368
TscAI CASTG 1 cut(s) 1324
TseFI GTSAC 1 cut(s) 885
Tsp45I GTSAC 1 cut(s) 885
TspDTI ATGAA 5 cut(s) 17, 318, 433, 628, 795
TspGWI ACGGA 2 cut(s) 1095, 1137
TspRI CASTG 1 cut(s) 1324
Van91I CCANNNNNTGG 1 cut(s) 754
VpaK11BI GGWCC 2 cut(s) 536, 871
XapI RAATTY 4 cut(s) 271, 751, 1091, 1351
XceI RCATGY 1 cut(s) 925
XmiI GTMKAC 2 cut(s) 376, 972
XspI CTAG 2 cut(s) 290, 954
Zsp2I ATGCAT 1 cut(s) 715
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.