RLG00000017795

Lectin-domain containing receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
21345059 .. 21350564
5506 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017795

Sequence Viewer

Length: 2211 bp
ATGGTCAAGTTTTTCAAGAGTTCAGCATCTCTACATGTCTTCTTTTCGCTTCTGCTTCTTCCTTATGCTAGCTCAATCTATTTCAAACTATCCCGCTTTGAACCGAATGCAGGCAACATACTCTATCAGGGAGATGCAGCGCCTTCCATTGGAGCAATTGATCTAATTAACACGCGTGCTTTTGTTTGCCGGGTTGGCTTGGCCACCTATGCTCAAAGGGTACCGCTCTGGGACTCTAGTACAGGAAAGCTCACTGACTTCACAACTCACTTCTCATTCATCATTGACACAGATGGTTACCCTACTTATGGCCATGGAATTGCATTCTTTCTCGCTCCTGTTGGATTTCAACTCCCACCAAATTCAGTTGGTGGCTTTCTAGGCTTGTTCAACACAACAACCAGTGACTCCTCCGGCAACAAGATTGTTCTAGTTGAGTTTGACTCCTTTATAAACCCTGAATGGGATCCTGGTTATCAGCATTTTGGGGAGCGAAATCGGCTTGTTTCATGGGAGTTTAGTTCCACTTTGGATAGAAAAGAAACTACTGGGAAGAACTCAAAGAAGAAAAAATTAGTGGTGGGTTTAACAGTTTCGGGTGTTCTGATGGCTGGGATATTTACAGTGTTGCTTGTGGTGTTGCGGAGGATGAAGCAAAAGAAAAGGCAAACTCCAGAGACACAGAACTTAAACTCCATGAATGAAGACCTTGAAAGAGGAGCAGGACCGAGACGGTTCTCTTATACAGATCTTGCTACAGCTACTAACAATTTCTCTAACGAGAGGAAGTTAGGGGAAGGGGGGTTTGGTGCTGTATACAGGGGCTACTTGGCTGATTTAGATACTGTAGTAGCGGTGAAGAAAATCTCAAGTGGGTCTAGGCAGGGAAAAAAGGAGTACAGAACTGAGGTAAAGGTTATAAGCAGCCTGAGACACCGAAATCTGGTGCAACTCATAGGATGGTGCCATGATGGAGGACAATTCCTACTAGTGTACGAGTTCATGCCAAATGGTAGCCTTGATGCTCACTTATTTGGGAAGAGTAGATCTGCTCTGTCCTGGGCCATGAGATACAAGATATCTCTAGGGTTGGGCTCTGCACTGCTTTATCTTCATGAAGAGTGGGAGCAATGTGTTGTTCACCGGGATATTAAATCAAGCAATATCATGCTAGATTCCAGCTTTAATGTCAAACTCGGTGACTTTGGGTTAGCTCGGCTAATGGACCATGAGCTAGGTCCCCAGACAACTGGAGTGGTTGGGACGCTAGGTTACATGGCTCCAGAATATTTCAGGACAGGTCGGGCTAGTAAAGAGTCGGATGTTTATAGCTTCGGGGTGGTCATCTTAGAAATCGCCACTGGTAAAAGGTCAGTGGATCGTATGGGAGAGGATTCAGAAATGGGACTGATAGAGTGGGTTTGGGACCTTTATGGGAAAGGAAATTTTCTTATGGCAGTGGATGAGAGGCTGCACTCGGACTATAACGAGAAGCAAGCAGAGTGCATGATAGTTGTAGGATTGTGGTGTGTTCACCCTGACAAAAGCTTAAGGGCCTCAATAAGGCAAGCAGTTCATGTTCTGAACTTTGAGGCAGCATTGCCAAATGTTCCTACAAATATGCCTGTTCCTACGTATCAGTGGCTTTGGGCCCCGGCCCGGCTTACTGTACCGGAACCAGAATCCGTTTTAGGTAGATGGGAGATGTTGAAATCAATCTATTTGAGCTGGGAAGGGCTTCATTTGGTGAATCAAAGACAAGAAGTCGAGAAAAGCAATGGTGAGAGCGAGAACAAGAACAAGAAGAAGAAAGATCTGAAATGGCATATCAGACGAAATACAAAGACAAGATGGAAGTACACCCTCCACAAAATCCCTGAAAGGGACATCAACAAGAACAAAAAAGAGAGGAAGTCAGGTGAAGGAGGGTCTGGTTCTGTTTACAGGGGCCACCTAGTTGAATCAGATACAGCAGTTGCAGTGAAGAAAATCTCAAGCAGTGCCATGATGAAGGTGATGGTCAGTTCCTACTTGTATGAATTCATGCCAAATGGTAGCCTTGAATCTCACCTCTCCGGGAAAAGTAGGTCTACTGATATACTACCCTGGGTTAAGAGATGCAAGATATCTCAGGGTTTGGCATCTGCATTGCTTTATCTTAATGAAGGCTGGAACAGGCAGCAATGCATGGTGCACCGAGATGTTAAATAA

Protein Analysis

737

Amino Acids

82.93

Weight (kDa)

9.32

Isoelectric Point (pI)

34.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 27 - 186 1.5e-34 Legume lectin domain
Pkinase PF00069 258 - 526 3.6e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 260 - 465 8.3e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 452, 920
Acc65I GGTACC 1 cut(s) 220
AccB1I GGYRCC 2 cut(s) 220, 963
AccBSI CCGCTC 1 cut(s) 226
AccI GTMKAC 2 cut(s) 816, 2090
AccII CGCG 1 cut(s) 175
AciI CCGC 4 cut(s) 94, 224, 643, 854
AclWI GGATC 3 cut(s) 461, 474, 1386
AcoI YGGCCR 2 cut(s) 201, 310
AcsI RAATTY 3 cut(s) 361, 1444, 2039
AfaI GTAC 6 cut(s) 222, 241, 899, 995, 1671, 1859
AfiI CCNNNNNNNGG 8 cut(s) 110, 149, 308, 463, 943, 1563, 1659, 1882
AflII CTTAAG 1 cut(s) 1549
AflIII ACRYGT 2 cut(s) 34, 173
AgsI TTSAA 9 cut(s) 16, 85, 101, 350, 391, 713, 1711, 1961, 2063
AhdI GACNNNNNGTC 1 cut(s) 1763
AhlI ACTAGT 1 cut(s) 988
AjnI CCWGG 3 cut(s) 469, 1058, 2105
AjuI GAANNNNNNNTTGG 2 cut(s) 789, 821
AloI GAACNNNNNNTCC 2 cut(s) 677, 709
AluBI AGCT 9 cut(s) 72, 250, 761, 1182, 1214, 1234, 1332, 1548, 1728
AluI AGCT 9 cut(s) 72, 250, 761, 1182, 1214, 1234, 1332, 1548, 1728
Alw21I GWGCWC 1 cut(s) 2196
Alw26I GTCTC 3 cut(s) 671, 724, 925
Alw44I GTGCAC 1 cut(s) 2192
AlwI GGATC 3 cut(s) 461, 474, 1386
AoxI GGCC 7 cut(s) 201, 310, 1062, 1554, 1650, 1656, 1948
ApaI GGGCCC 1 cut(s) 1654
ApaLI GTGCAC 1 cut(s) 2192
ApeKI GCWGC 5 cut(s) 137, 924, 1471, 1595, 2179
ApoI RAATTY 3 cut(s) 361, 1444, 2039
Asp700I GAANNNNTTC 1 cut(s) 1737
Asp718I GGTACC 1 cut(s) 220
AspLEI GCGC 1 cut(s) 142
AsuC2I CCSGG 5 cut(s) 191, 1145, 1655, 1660, 2077
AsuHPI GGTGA 9 cut(s) 868, 1133, 1211, 1526, 1759, 1793, 1931, 2026, 2060
AsuNHI GCTAGC 1 cut(s) 68
AvaII GGWCC 4 cut(s) 725, 1225, 1238, 1426
BaeGI GKGCMC 2 cut(s) 1654, 2196
BaeI ACNNNNGTAYC 4 cut(s) 834, 867, 1959, 1992
BalI TGGCCA 2 cut(s) 203, 312
BamHI GGATCC 1 cut(s) 466
BanI GGYRCC 2 cut(s) 220, 963
BanII GRGCYC 2 cut(s) 1097, 1654
BbsI GAAGAC 2 cut(s) 31, 711
Bbv12I GWGCWC 1 cut(s) 2196
BbvI GCAGC 5 cut(s) 149, 936, 1458, 1607, 2191
BccI CCATC 7 cut(s) 287, 601, 954, 965, 1692, 1845, 2011
BciT130I CCWGG 3 cut(s) 471, 1060, 2107
BcnI CCSGG 5 cut(s) 191, 1145, 1655, 1660, 2077
BcoDI GTCTC 3 cut(s) 671, 724, 925
BcuI ACTAGT 1 cut(s) 988
BfmI CTRYAG 2 cut(s) 756, 846
BfoI RGCGCY 1 cut(s) 143
BfrI CTTAAG 1 cut(s) 1549
BglI GCCNNNNNGGC 1 cut(s) 195
BglII AGATCT 3 cut(s) 748, 1046, 1813
BisI GCNGC 5 cut(s) 138, 925, 1472, 1596, 2180
BlsI GCNGC 5 cut(s) 139, 926, 1473, 1597, 2181
Bme1390I CCNGG 8 cut(s) 191, 471, 1060, 1145, 1655, 1660, 2077, 2107
Bme18I GGWCC 4 cut(s) 725, 1225, 1238, 1426
BmeRI GACNNNNNGTC 1 cut(s) 1763
BmrFI CCNGG 8 cut(s) 191, 471, 1060, 1145, 1655, 1660, 2077, 2107
BmrI ACTGGG 1 cut(s) 558
BmsI GCATC 5 cut(s) 35, 124, 1012, 2108, 2150
BmtI GCTAGC 1 cut(s) 72
BmuI ACTGGG 1 cut(s) 558
BpiI GAAGAC 2 cut(s) 31, 711
BplI GAGNNNNNCTC 2 cut(s) 428, 460
BpmI CTGGAG 3 cut(s) 657, 1266, 1272
BpuEI CTTGAG 2 cut(s) 853, 1978
BpuMI CCSGG 5 cut(s) 191, 1145, 1655, 1660, 2077
BsaAI YACGTR 1 cut(s) 1635
BsaJI CCNNGG 5 cut(s) 313, 1059, 1653, 2105, 2106
BsaWI WCCGGW 1 cut(s) 1672
BsaXI ACNNNNNCTCC 2 cut(s) 677, 707
Bsc4I CCNNNNNNNGG 8 cut(s) 110, 149, 308, 463, 943, 1563, 1659, 1882
Bse1I ACTGG 4 cut(s) 402, 553, 1255, 1366
Bse3DI GCAATG 5 cut(s) 1136, 1598, 1783, 2147, 2189
BseBI CCWGG 3 cut(s) 471, 1060, 2107
BseDI CCNNGG 5 cut(s) 313, 1059, 1653, 2105, 2106
BseGI GGATG 4 cut(s) 654, 965, 1327, 1468
BseLI CCNNNNNNNGG 8 cut(s) 110, 149, 308, 463, 943, 1563, 1659, 1882
BseMI GCAATG 5 cut(s) 1136, 1598, 1783, 2147, 2189
BseMII CTCAG 3 cut(s) 897, 920, 2144
BseNI ACTGG 4 cut(s) 402, 553, 1255, 1366
BseRI GAGGAG 2 cut(s) 400, 732
BseSI GKGCMC 2 cut(s) 1654, 2196
BseXI GCAGC 5 cut(s) 149, 936, 1458, 1607, 2191
BseYI CCCAGC 2 cut(s) 611, 1728
BsgI GTGCAG 2 cut(s) 1083, 1457
Bsh1236I CGCG 1 cut(s) 175
BshFI GGCC 7 cut(s) 203, 312, 1064, 1556, 1652, 1658, 1950
BshNI GGYRCC 2 cut(s) 220, 963
BsiHKAI GWGCWC 1 cut(s) 2196
BsiSI CCGG 7 cut(s) 190, 414, 1144, 1655, 1660, 1673, 2076
BslFI GGGAC 6 cut(s) 245, 1224, 1276, 1419, 1439, 1898
BslI CCNNNNNNNGG 8 cut(s) 110, 149, 308, 463, 943, 1563, 1659, 1882
BsmAI GTCTC 3 cut(s) 671, 724, 925
BsmBI CGTCTC 1 cut(s) 724
BsmFI GGGAC 6 cut(s) 245, 1224, 1276, 1419, 1439, 1898
BsmI GAATGC 2 cut(s) 112, 323
BsnI GGCC 7 cut(s) 203, 312, 1064, 1556, 1652, 1658, 1950
Bsp120I GGGCCC 1 cut(s) 1650
Bsp1286I GDGCHC 3 cut(s) 1097, 1654, 2196
Bsp143I GATC 6 cut(s) 160, 466, 748, 1046, 1378, 1813
Bsp19I CCATGG 1 cut(s) 313
BspACI CCGC 4 cut(s) 94, 224, 643, 854
BspANI GGCC 7 cut(s) 203, 312, 1064, 1556, 1652, 1658, 1950
BspCNI CTCAG 3 cut(s) 898, 921, 2143
BspFNI CGCG 1 cut(s) 175
BspHI TCATGA 1 cut(s) 1114
BspOI GCTAGC 1 cut(s) 72
BspPI GGATC 3 cut(s) 461, 474, 1386
BspT107I GGYRCC 2 cut(s) 220, 963
BspTI CTTAAG 1 cut(s) 1549
BsrBI CCGCTC 1 cut(s) 226
BsrDI GCAATG 5 cut(s) 1136, 1598, 1783, 2147, 2189
BsrI ACTGG 4 cut(s) 402, 553, 1255, 1366
BssECI CCNNGG 5 cut(s) 313, 1059, 1653, 2105, 2106
BssMI GATC 6 cut(s) 160, 466, 748, 1046, 1378, 1813
BssNAI GTATAC 1 cut(s) 817
BssT1I CCWWGG 1 cut(s) 313
Bst1107I GTATAC 1 cut(s) 817
Bst2UI CCWGG 3 cut(s) 471, 1060, 2107
Bst4CI ACNGT 5 cut(s) 592, 625, 735, 847, 1669
Bst6I CTCTTC 2 cut(s) 1034, 1113
BstAFI CTTAAG 1 cut(s) 1549
BstBAI YACGTR 1 cut(s) 1635
BstC8I GCNNGC 5 cut(s) 70, 112, 177, 1497, 1569
BstDEI CTNAG 4 cut(s) 906, 929, 1348, 2130
BstDSI CCRYGG 1 cut(s) 313
BstEII GGTNACC 1 cut(s) 296
BstENI CCTNNNNNAGG 1 cut(s) 1561
BstF5I GGATG 4 cut(s) 654, 965, 1327, 1468
BstFNI CGCG 1 cut(s) 175
BstH2I RGCGCY 1 cut(s) 143
BstHHI GCGC 1 cut(s) 142
BstKTI GATC 6 cut(s) 163, 469, 751, 1049, 1381, 1816
BstMAI GTCTC 3 cut(s) 671, 724, 925
BstMBI GATC 6 cut(s) 160, 466, 748, 1046, 1378, 1813
BstMWI GCNNNNNNNGC 4 cut(s) 195, 209, 381, 499
BstNI CCWGG 3 cut(s) 471, 1060, 2107
BstNSI RCATGY 1 cut(s) 38
BstPI GGTNACC 1 cut(s) 296
BstSCI CCNGG 8 cut(s) 189, 469, 1058, 1143, 1653, 1658, 2075, 2105
BstSFI CTRYAG 2 cut(s) 756, 846
BstSLI GKGCMC 2 cut(s) 1654, 2196
BstSNI TACGTA 1 cut(s) 1635
BstUI CGCG 1 cut(s) 175
BstV1I GCAGC 5 cut(s) 149, 936, 1458, 1607, 2191
BstV2I GAAGAC 2 cut(s) 31, 711
BstX2I RGATCY 4 cut(s) 466, 748, 1046, 1813
BstXI CCANNNNNNTGG 1 cut(s) 1250
BstYI RGATCY 4 cut(s) 466, 748, 1046, 1813
BstZ17I GTATAC 1 cut(s) 817
BsuRI GGCC 7 cut(s) 203, 312, 1064, 1556, 1652, 1658, 1950
BtgI CCRYGG 1 cut(s) 313
BtsCI GGATG 4 cut(s) 654, 965, 1327, 1468
BtsI GCAGTG 4 cut(s) 1100, 1464, 1986, 2005
Cac8I GCNNGC 5 cut(s) 70, 112, 177, 1497, 1569
CciI TCATGA 1 cut(s) 1114
CfoI GCGC 1 cut(s) 142
CseI GACGC 1 cut(s) 1273
Csp6I GTAC 6 cut(s) 221, 240, 898, 994, 1670, 1858
CspCI CAANNNNNGTGG 2 cut(s) 1236, 1271
CviQI GTAC 6 cut(s) 221, 240, 898, 994, 1670, 1858
DdeI CTNAG 4 cut(s) 906, 929, 1348, 2130
DpnI GATC 6 cut(s) 162, 468, 750, 1048, 1380, 1815
DpnII GATC 6 cut(s) 160, 466, 748, 1046, 1378, 1813
DriI GACNNNNNGTC 1 cut(s) 1763
EaeI YGGCCR 2 cut(s) 201, 310
Eam1104I CTCTTC 2 cut(s) 1034, 1113
Eam1105I GACNNNNNGTC 1 cut(s) 1763
EarI CTCTTC 2 cut(s) 1034, 1113
Eco105I TACGTA 1 cut(s) 1635
Eco130I CCWWGG 1 cut(s) 313
Eco24I GRGCYC 2 cut(s) 1097, 1654
Eco32I GATATC 2 cut(s) 1080, 2127
Eco47I GGWCC 4 cut(s) 725, 1225, 1238, 1426
Eco91I GGTNACC 1 cut(s) 296
EcoNI CCTNNNNNAGG 1 cut(s) 1561
EcoO109I RGGNCCY 4 cut(s) 1238, 1426, 1554, 1651
EcoO65I GGTNACC 1 cut(s) 296
EcoRI GAATTC 1 cut(s) 2039
EcoRII CCWGG 3 cut(s) 469, 1058, 2105
EcoRV GATATC 2 cut(s) 1080, 2127
EcoT14I CCWWGG 1 cut(s) 313
EcoT22I ATGCAT 1 cut(s) 2189
EcoT38I GRGCYC 2 cut(s) 1097, 1654
ErhI CCWWGG 1 cut(s) 313
Esp3I CGTCTC 1 cut(s) 724
FaqI GGGAC 6 cut(s) 245, 1224, 1276, 1419, 1439, 1898
FauI CCCGC 1 cut(s) 101
FblI GTMKAC 2 cut(s) 816, 2090
Fnu4HI GCNGC 5 cut(s) 138, 925, 1472, 1596, 2180
FokI GGATG 4 cut(s) 661, 972, 1334, 1475
FriOI GRGCYC 2 cut(s) 1097, 1654
Fsp4HI GCNGC 5 cut(s) 138, 925, 1472, 1596, 2180
GlaI GCGC 1 cut(s) 141
GluI GCNGC 5 cut(s) 138, 925, 1472, 1596, 2180
GsaI CCCAGC 2 cut(s) 615, 1732
GsuI CTGGAG 3 cut(s) 657, 1266, 1272
HaeII RGCGCY 1 cut(s) 143
HaeIII GGCC 7 cut(s) 203, 312, 1064, 1556, 1652, 1658, 1950
HapII CCGG 7 cut(s) 190, 414, 1144, 1655, 1660, 1673, 2076
HgaI GACGC 1 cut(s) 1273
HhaI GCGC 1 cut(s) 142
Hin6I GCGC 1 cut(s) 140
HinP1I GCGC 1 cut(s) 140
HindIII AAGCTT 1 cut(s) 1546
HpaII CCGG 7 cut(s) 190, 414, 1144, 1655, 1660, 1673, 2076
HphI GGTGA 9 cut(s) 868, 1133, 1211, 1526, 1759, 1793, 1931, 2026, 2060
Hpy166II GTNNAC 8 cut(s) 817, 994, 1141, 1534, 1860, 1942, 2091, 2194
Hpy188I TCNGA 8 cut(s) 606, 1321, 1399, 1480, 1584, 1818, 1832, 1966
Hpy188III TCNNGA 6 cut(s) 16, 674, 1115, 1283, 1294, 1768
Hpy8I GTNNAC 8 cut(s) 817, 994, 1141, 1534, 1860, 1942, 2091, 2194
HpyAV CCTTC 6 cut(s) 153, 791, 1727, 1916, 2005, 2159
HpyCH4III ACNGT 5 cut(s) 592, 625, 735, 847, 1669
HpyCH4IV ACGT 1 cut(s) 1634
HpyF10VI GCNNNNNNNGC 4 cut(s) 195, 209, 381, 499
HpyF3I CTNAG 4 cut(s) 906, 929, 1348, 2130
HpySE526I ACGT 1 cut(s) 1634
HspAI GCGC 1 cut(s) 140
KpnI GGTACC 1 cut(s) 224
Kzo9I GATC 6 cut(s) 160, 466, 748, 1046, 1378, 1813
LmnI GCTCC 6 cut(s) 152, 340, 490, 719, 1126, 1285
Lsp1109I GCAGC 5 cut(s) 149, 936, 1458, 1607, 2191
LweI GCATC 5 cut(s) 35, 124, 1012, 2108, 2150
MaeII ACGT 1 cut(s) 1634
MaeIII GTNAC 4 cut(s) 296, 404, 1199, 1271
MalI GATC 6 cut(s) 162, 468, 750, 1048, 1380, 1815
MbiI CCGCTC 1 cut(s) 226
MboI GATC 6 cut(s) 160, 466, 748, 1046, 1378, 1813
MfeI CAATTG 1 cut(s) 156
MflI RGATCY 4 cut(s) 466, 748, 1046, 1813
MhlI GDGCHC 3 cut(s) 1097, 1654, 2196
MlsI TGGCCA 2 cut(s) 203, 312
MluCI AATT 9 cut(s) 156, 165, 318, 361, 572, 769, 980, 1444, 2039
MluI ACGCGT 1 cut(s) 173
MluNI TGGCCA 2 cut(s) 203, 312
MlyI GAGTC 4 cut(s) 227, 401, 437, 1325
MmeI TCCRAC 2 cut(s) 322, 1299
Mox20I TGGCCA 2 cut(s) 203, 312
Mph1103I ATGCAT 1 cut(s) 2189
MroXI GAANNNNTTC 1 cut(s) 1737
MscI TGGCCA 2 cut(s) 203, 312
MseI TTAA 9 cut(s) 168, 587, 689, 1152, 1185, 1550, 2112, 2160, 2205
MslI CAYNNNNRTG 1 cut(s) 2199
Msp20I TGGCCA 2 cut(s) 203, 312
MspCI CTTAAG 1 cut(s) 1549
MspI CCGG 7 cut(s) 190, 414, 1144, 1655, 1660, 1673, 2076
MspR9I CCNGG 8 cut(s) 191, 471, 1060, 1145, 1655, 1660, 2077, 2107
MunI CAATTG 1 cut(s) 156
Mva1269I GAATGC 2 cut(s) 112, 323
MvaI CCWGG 3 cut(s) 471, 1060, 2107
MvnI CGCG 1 cut(s) 175
MwoI GCNNNNNNNGC 4 cut(s) 195, 209, 381, 499
NciI CCSGG 5 cut(s) 191, 1145, 1655, 1660, 2077
NcoI CCATGG 1 cut(s) 313
NdeII GATC 6 cut(s) 160, 466, 748, 1046, 1378, 1813
NheI GCTAGC 1 cut(s) 68
NmeAIII GCCGAG 1 cut(s) 1195
NmuCI GTSAC 2 cut(s) 404, 1199
NsiI ATGCAT 1 cut(s) 2189
NspI RCATGY 1 cut(s) 38
PagI TCATGA 1 cut(s) 1114
PasI CCCWGGG 1 cut(s) 2106
PciI ACATGT 1 cut(s) 34
PctI GAATGC 2 cut(s) 112, 323
PdmI GAANNNNTTC 1 cut(s) 1737
PfeI GAWTC 6 cut(s) 1175, 1394, 1682, 1750, 1961, 2063
PfoI TCCNGGA 1 cut(s) 2075
PkrI GCNGC 5 cut(s) 139, 926, 1473, 1597, 2181
PleI GAGTC 4 cut(s) 227, 401, 437, 1324
PpsI GAGTC 4 cut(s) 227, 401, 437, 1324
Ppu21I YACGTR 1 cut(s) 1635
PpuMI RGGWCCY 2 cut(s) 1238, 1426
PscI ACATGT 1 cut(s) 34
PsiI TTATAA 2 cut(s) 452, 920
Psp5II RGGWCCY 2 cut(s) 1238, 1426
Psp6I CCWGG 3 cut(s) 469, 1058, 2105
PspEI GGTNACC 1 cut(s) 296
PspFI CCCAGC 2 cut(s) 611, 1728
PspGI CCWGG 3 cut(s) 469, 1058, 2105
PspOMI GGGCCC 1 cut(s) 1650
PspPPI RGGWCCY 2 cut(s) 1238, 1426
PsuI RGATCY 4 cut(s) 466, 748, 1046, 1813
RsaI GTAC 6 cut(s) 222, 241, 899, 995, 1671, 1859
RsaNI GTAC 6 cut(s) 221, 240, 898, 994, 1670, 1858
RseI CAYNNNNRTG 1 cut(s) 2199
SaqAI TTAA 9 cut(s) 168, 587, 689, 1152, 1185, 1550, 2112, 2160, 2205
SatI GCNGC 5 cut(s) 138, 925, 1472, 1596, 2180
Sau3AI GATC 6 cut(s) 160, 466, 748, 1046, 1378, 1813
SchI GAGTC 4 cut(s) 227, 401, 437, 1325
ScrFI CCNGG 8 cut(s) 191, 471, 1060, 1145, 1655, 1660, 2077, 2107
SduI GDGCHC 3 cut(s) 1097, 1654, 2196
SfaNI GCATC 5 cut(s) 35, 124, 1012, 2108, 2150
SfcI CTRYAG 2 cut(s) 756, 846
SinI GGWCC 4 cut(s) 725, 1225, 1238, 1426
SmiMI CAYNNNNRTG 1 cut(s) 2199
SmlI CTYRAG 3 cut(s) 868, 1549, 1993
SmoI CTYRAG 3 cut(s) 868, 1549, 1993
SnaBI TACGTA 1 cut(s) 1635
SpeI ACTAGT 1 cut(s) 988
Sse9I AATT 9 cut(s) 156, 165, 318, 361, 572, 769, 980, 1444, 2039
SsiI CCGC 4 cut(s) 94, 224, 643, 854
SspI AATATT 1 cut(s) 1289
StyD4I CCNGG 8 cut(s) 189, 469, 1058, 1143, 1653, 1658, 2075, 2105
StyI CCWWGG 1 cut(s) 313
TaaI ACNGT 5 cut(s) 592, 625, 735, 847, 1669
TaiI ACGT 1 cut(s) 1637
TaqI TCGA 1 cut(s) 1767
TaqII GACCGA 1 cut(s) 742
TasI AATT 9 cut(s) 156, 165, 318, 361, 572, 769, 980, 1444, 2039
TatI WGTACW 3 cut(s) 239, 897, 1857
TfiI GAWTC 6 cut(s) 1175, 1394, 1682, 1750, 1961, 2063
Tru1I TTAA 9 cut(s) 168, 587, 689, 1152, 1185, 1550, 2112, 2160, 2205
Tru9I TTAA 9 cut(s) 168, 587, 689, 1152, 1185, 1550, 2112, 2160, 2205
TseFI GTSAC 2 cut(s) 404, 1199
TseI GCWGC 5 cut(s) 137, 924, 1471, 1595, 2179
Tsp45I GTSAC 2 cut(s) 404, 1199
TspGWI ACGGA 1 cut(s) 1675
Vha464I CTTAAG 1 cut(s) 1549
VneI GTGCAC 1 cut(s) 2192
VpaK11BI GGWCC 4 cut(s) 725, 1225, 1238, 1426
XagI CCTNNNNNAGG 1 cut(s) 1561
XapI RAATTY 3 cut(s) 361, 1444, 2039
XceI RCATGY 1 cut(s) 38
XmiI GTMKAC 2 cut(s) 816, 2090
XmnI GAANNNNTTC 1 cut(s) 1737
Zsp2I ATGCAT 1 cut(s) 2189
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.