RLG00000017640

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
19400282 .. 19401766
1485 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017640

Sequence Viewer

Length: 1485 bp
ATGTCTCTACCAGTAATGGCAACTCTTAGCTTTCACTTCATTTTCATCATTTTTCTCCTTCCCTTTTCCCACCAACTTTCCTTCAATATCAATAAGTTTAATCAAGGCGGAAGTAATATTCTCTACGAAGGTGATGCCGCGCCTTCTTATTTACAAGGAATGGAAGTGATTGAACTCAACACAGACACAGTTTTCCGCGTTGGCCGGGCTACCTATGCCGAGCCTTTCCACTTGTGGCAAGGTTCACTTGCTGCAGACTTCACTACTAACTTCTCTTTCATTGTGGACACTGTTAACAGAACCTTAGGCCAGTTTGCTGATGGGTTTGTCTTCTTCCTTGCTCCGGTTCACTTTCCGATCCCACCCGACTCTGCTGGTGCTGATCTAGGATTGTATAACTCCACAACTCGTTTTGCCTCCCAAAACCAACTTGTAACGGTTGAGTTCGACACTTTCTCAAATTCATGGGATCCACCTGACCCGCACATTGGGATCAACAACCAGACCATCTCCTCAGTTGTTTATGCCAGTTGGGATCCTATCCTCCACAGTGGGAAAGAGGGCCGAGCACGTATTACTTACAATGCTACCACCAACAACCTCAGTGTGTTTTGGAACTACGACGGAGGCCCCAACCCTGAACTTAATAGTTATGTGCCAAACTCTTCCCTTTCCATCCTTATTGACCTCAGAAATGCTCTACCCAAGTGGGTTACAATTGGATTTTCATCTGCTACAGGCCTTTTCTCGGAGTTCCATGTGATAAGTTCATGGGAATTCAGTTCGGATTTGGATACTGAAGATATCGTAAGAATGAAAAAGAAGAAGAGGATAGTCTTAAAGATTGGGGTCGTTGCAGTAGTTCTTTTCTTCATTTTGATGCTTGGTGTGGCCATATATTGGTGGGTAGTAATAAGGAAGCGGATGAAGAGGACTCGTGGAGATGGAAATGAGTCGAATGACTCCTCCAATGTTGCATTGTCCACCATAAATTCAGATCTTCAGATACTAGCCTTGCCGAGACAATGTACTTATCAAGAACTAGTTGCAGCCACCAATGGCTTCGCAAAAGACAGAAGGCTAGGCCAAGGAGGATCAGGACAAGTTTATAAAGGGATCATACAAGATCTAGGCTGTGCAGTTGCTGTGAAAAGAATCTTTGCACAATCCGACAAGCACTATGAGAAAATCTTCATCAACGAAGTCAAGATCATAAGCCGCATAATACATAAAAACTTGGTGCAGTTTATTGGATGGTGTCATGAGCAAGGAGAATGCTTACTTGTTTATGCATACATGCCTAACAGTAGCCTTGACACGCATCTATTTGGCCCTAGAGCAACTTTGCAATGGGAGTTTAGGTATAGAATAGCTCTAGGCTTGGCCTCGGCTCTTCATTATCGACACGAGGATGCAGAGCAGTGTGTCCTTCATAGGGATATCAAATCAGCTAATGTTCTGCTGGACAATGATTTCAACACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

495

Amino Acids

55.54

Weight (kDa)

6.27

Isoelectric Point (pI)

37.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 26 - 272 9.4e-59 Legume lectin domain
Lectin_L-type_dom PF18483 44 - 253 1e-05 Legume lectin beta-barrel domain
Pkinase PF00069 356 - 491 1.7e-24 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 358 - 491 1.6e-22 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1110
AccB7I CCANNNNNTGG 1 cut(s) 900
AccII CGCG 2 cut(s) 140, 198
AciI CCGC 6 cut(s) 108, 138, 196, 482, 922, 1219
AclWI GGATC 8 cut(s) 352, 464, 477, 500, 530, 543, 1102, 1124
AcoI YGGCCR 2 cut(s) 202, 891
AcsI RAATTY 3 cut(s) 460, 776, 991
AcuI CTGAAG 2 cut(s) 819, 986
AfaI GTAC 1 cut(s) 1030
AfiI CCNNNNNNNGG 5 cut(s) 343, 488, 748, 900, 1435
AgsI TTSAA 3 cut(s) 85, 173, 1477
AhlI ACTAGT 1 cut(s) 1042
AluBI AGCT 3 cut(s) 30, 1373, 1451
AluI AGCT 3 cut(s) 30, 1373, 1451
Alw21I GWGCWC 1 cut(s) 571
Alw26I GTCTC 2 cut(s) 9, 1015
AlwI GGATC 8 cut(s) 352, 464, 477, 500, 530, 543, 1102, 1124
AlwNI CAGNNNCTG 1 cut(s) 1145
AoxI GGCC 9 cut(s) 202, 307, 562, 628, 739, 891, 1084, 1330, 1383
ApeKI GCWGC 2 cut(s) 251, 1049
ApoI RAATTY 3 cut(s) 460, 776, 991
Asp700I GAANNNNTTC 1 cut(s) 1190
AspLEI GCGC 1 cut(s) 142
AspS9I GGNCC 3 cut(s) 562, 629, 1331
AsuC2I CCSGG 1 cut(s) 206
AsuHPI GGTGA 1 cut(s) 143
AxyI CCTNAGG 1 cut(s) 304
BalI TGGCCA 1 cut(s) 893
BamHI GGATCC 2 cut(s) 469, 535
BauI CACGAG 2 cut(s) 936, 1406
BbsI GAAGAC 1 cut(s) 322
Bbv12I GWGCWC 1 cut(s) 571
BbvI GCAGC 2 cut(s) 238, 1061
BccI CCATC 5 cut(s) 314, 515, 683, 938, 1248
BcgI CGANNNNNNTGC 2 cut(s) 116, 150
BciVI GTATCC 1 cut(s) 787
BcnI CCSGG 1 cut(s) 206
BcoDI GTCTC 2 cut(s) 9, 1015
BcuI ACTAGT 1 cut(s) 1042
BfaI CTAG 7 cut(s) 386, 1010, 1043, 1082, 1130, 1335, 1376
BfmI CTRYAG 2 cut(s) 252, 735
BfuI GTATCC 1 cut(s) 787
BglII AGATCT 2 cut(s) 997, 1126
BisI GCNGC 4 cut(s) 138, 252, 1050, 1219
BlsI GCNGC 4 cut(s) 139, 253, 1051, 1220
Bme1390I CCNGG 1 cut(s) 206
BmgT120I GGNCC 3 cut(s) 562, 629, 1331
BmiI GGNNCC 3 cut(s) 471, 537, 631
BmrFI CCNGG 1 cut(s) 206
BmsI GCATC 4 cut(s) 124, 870, 1330, 1402
BpiI GAAGAC 1 cut(s) 322
BpuMI CCSGG 1 cut(s) 206
BsaAI YACGTR 1 cut(s) 572
BsaBI GATNNNNATC 1 cut(s) 727
BsaJI CCNNGG 2 cut(s) 1087, 1386
BsaWI WCCGGW 1 cut(s) 343
BsaXI ACNNNNNCTCC 2 cut(s) 1346, 1376
Bsc4I CCNNNNNNNGG 5 cut(s) 343, 488, 748, 900, 1435
Bse1I ACTGG 3 cut(s) 11, 310, 528
Bse21I CCTNAGG 1 cut(s) 304
Bse3DI GCAATG 1 cut(s) 1355
Bse8I GATNNNNATC 1 cut(s) 727
BseDI CCNNGG 2 cut(s) 1087, 1386
BseGI GGATG 4 cut(s) 675, 930, 1259, 1417
BseJI GATNNNNATC 1 cut(s) 727
BseLI CCNNNNNNNGG 5 cut(s) 343, 488, 748, 900, 1435
BseMI GCAATG 1 cut(s) 1355
BseMII CTCAG 3 cut(s) 528, 616, 703
BseNI ACTGG 3 cut(s) 11, 310, 528
BseRI GAGGAG 2 cut(s) 502, 955
BseXI GCAGC 2 cut(s) 238, 1061
BsgI GTGCAG 2 cut(s) 1158, 1262
Bsh1236I CGCG 2 cut(s) 140, 198
BshFI GGCC 9 cut(s) 204, 309, 564, 630, 741, 893, 1086, 1332, 1385
BsiHKAI GWGCWC 1 cut(s) 571
BsiSI CCGG 2 cut(s) 205, 344
BslI CCNNNNNNNGG 5 cut(s) 343, 488, 748, 900, 1435
BsmAI GTCTC 2 cut(s) 9, 1015
BsmI GAATGC 1 cut(s) 1280
BsnI GGCC 9 cut(s) 204, 309, 564, 630, 741, 893, 1086, 1332, 1385
Bsp1286I GDGCHC 1 cut(s) 571
BspACI CCGC 6 cut(s) 108, 138, 196, 482, 922, 1219
BspANI GGCC 9 cut(s) 204, 309, 564, 630, 741, 893, 1086, 1332, 1385
BspCNI CTCAG 3 cut(s) 527, 615, 702
BspFNI CGCG 2 cut(s) 140, 198
BspHI TCATGA 1 cut(s) 1261
BspLI GGNNCC 3 cut(s) 471, 537, 631
BspMAI CTGCAG 1 cut(s) 256
BspPI GGATC 8 cut(s) 352, 464, 477, 500, 530, 543, 1102, 1124
BspQI GCTCTTC 1 cut(s) 1398
BsrDI GCAATG 1 cut(s) 1355
BsrI ACTGG 3 cut(s) 11, 310, 528
BssECI CCNNGG 2 cut(s) 1087, 1386
BssSI CACGAG 2 cut(s) 936, 1406
BssT1I CCWWGG 1 cut(s) 1087
Bst2BI CACGAG 2 cut(s) 936, 1406
Bst4CI ACNGT 5 cut(s) 190, 292, 439, 551, 1307
Bst6I CTCTTC 4 cut(s) 670, 821, 923, 1398
BstBAI YACGTR 1 cut(s) 572
BstDEI CTNAG 5 cut(s) 26, 304, 514, 602, 689
BstF5I GGATG 4 cut(s) 675, 930, 1259, 1417
BstFNI CGCG 2 cut(s) 140, 198
BstHHI GCGC 1 cut(s) 142
BstMAI GTCTC 2 cut(s) 9, 1015
BstMWI GCNNNNNNNGC 1 cut(s) 215
BstNSI RCATGY 1 cut(s) 1300
BstSCI CCNGG 1 cut(s) 204
BstSFI CTRYAG 2 cut(s) 252, 735
BstUI CGCG 2 cut(s) 140, 198
BstV1I GCAGC 2 cut(s) 238, 1061
BstV2I GAAGAC 1 cut(s) 322
BstX2I RGATCY 4 cut(s) 469, 535, 997, 1126
BstYI RGATCY 4 cut(s) 469, 535, 997, 1126
Bsu36I CCTNAGG 1 cut(s) 304
BsuI GTATCC 1 cut(s) 787
BsuRI GGCC 9 cut(s) 204, 309, 564, 630, 741, 893, 1086, 1332, 1385
BtsCI GGATG 4 cut(s) 675, 930, 1259, 1417
BtsI GCAGTG 1 cut(s) 1427
BtsIMutI CAGTG 4 cut(s) 288, 556, 610, 1427
CaiI CAGNNNCTG 1 cut(s) 1145
CciI TCATGA 1 cut(s) 1261
CfoI GCGC 1 cut(s) 142
Cfr13I GGNCC 3 cut(s) 562, 629, 1331
Csp6I GTAC 1 cut(s) 1029
CviAII CATG 5 cut(s) 465, 758, 771, 1262, 1297
CviQI GTAC 1 cut(s) 1029
DdeI CTNAG 5 cut(s) 26, 304, 514, 602, 689
EaeI YGGCCR 2 cut(s) 202, 891
Eam1104I CTCTTC 4 cut(s) 670, 821, 923, 1398
EarI CTCTTC 4 cut(s) 670, 821, 923, 1398
EciI GGCGGA 1 cut(s) 123
Eco130I CCWWGG 1 cut(s) 1087
Eco147I AGGCCT 1 cut(s) 741
Eco32I GATATC 2 cut(s) 805, 1441
Eco57I CTGAAG 2 cut(s) 819, 986
Eco81I CCTNAGG 1 cut(s) 304
EcoO109I RGGNCCY 1 cut(s) 629
EcoRI GAATTC 1 cut(s) 776
EcoRV GATATC 2 cut(s) 805, 1441
EcoT14I CCWWGG 1 cut(s) 1087
EcoT22I ATGCAT 1 cut(s) 1294
ErhI CCWWGG 1 cut(s) 1087
FaeI CATG 5 cut(s) 468, 761, 774, 1265, 1300
FalI AAGNNNNNCTT 2 cut(s) 231, 263
FatI CATG 5 cut(s) 464, 757, 770, 1261, 1296
FauI CCCGC 1 cut(s) 489
Fnu4HI GCNGC 4 cut(s) 138, 252, 1050, 1219
FokI GGATG 4 cut(s) 662, 937, 1266, 1424
Fsp4HI GCNGC 4 cut(s) 138, 252, 1050, 1219
FspBI CTAG 7 cut(s) 386, 1010, 1043, 1082, 1130, 1335, 1376
GlaI GCGC 1 cut(s) 141
GluI GCNGC 4 cut(s) 138, 252, 1050, 1219
HaeIII GGCC 9 cut(s) 204, 309, 564, 630, 741, 893, 1086, 1332, 1385
HapII CCGG 2 cut(s) 205, 344
HhaI GCGC 1 cut(s) 142
Hin1II CATG 5 cut(s) 468, 761, 774, 1265, 1300
Hin6I GCGC 1 cut(s) 140
HinP1I GCGC 1 cut(s) 140
HincII GTYRAC 1 cut(s) 295
HindII GTYRAC 1 cut(s) 295
HinfI GANTC 5 cut(s) 368, 934, 953, 962, 1155
HpaI GTTAAC 1 cut(s) 295
HpaII CCGG 2 cut(s) 205, 344
HphI GGTGA 1 cut(s) 143
Hpy166II GTNNAC 5 cut(s) 245, 286, 295, 349, 984
Hpy188I TCNGA 7 cut(s) 357, 692, 751, 787, 997, 1005, 1171
Hpy188III TCNNGA 4 cut(s) 1037, 1098, 1207, 1262
Hpy8I GTNNAC 5 cut(s) 245, 286, 295, 349, 984
Hpy99I CGWCG 1 cut(s) 626
HpyAV CCTTC 6 cut(s) 68, 91, 122, 153, 1071, 1439
HpyCH4III ACNGT 5 cut(s) 190, 292, 439, 551, 1307
HpyCH4IV ACGT 1 cut(s) 571
HpyF10VI GCNNNNNNNGC 1 cut(s) 215
HpyF3I CTNAG 5 cut(s) 26, 304, 514, 602, 689
HpySE526I ACGT 1 cut(s) 571
Hsp92II CATG 5 cut(s) 468, 761, 774, 1265, 1300
HspAI GCGC 1 cut(s) 140
KspAI GTTAAC 1 cut(s) 295
LguI GCTCTTC 1 cut(s) 1398
LmnI GCTCC 1 cut(s) 346
Lsp1109I GCAGC 2 cut(s) 238, 1061
LweI GCATC 4 cut(s) 124, 870, 1330, 1402
MaeI CTAG 7 cut(s) 386, 1010, 1043, 1082, 1130, 1335, 1376
MaeII ACGT 1 cut(s) 571
MaeIII GTNAC 2 cut(s) 433, 712
MfeI CAATTG 1 cut(s) 717
MflI RGATCY 4 cut(s) 469, 535, 997, 1126
MhlI GDGCHC 1 cut(s) 571
MlsI TGGCCA 1 cut(s) 893
MluCI AATT 4 cut(s) 460, 717, 776, 991
MluNI TGGCCA 1 cut(s) 893
MlyI GAGTC 4 cut(s) 362, 928, 956, 962
MmeI TCCRAC 1 cut(s) 1194
Mox20I TGGCCA 1 cut(s) 893
Mph1103I ATGCAT 1 cut(s) 1294
MroXI GAANNNNTTC 1 cut(s) 1190
MscI TGGCCA 1 cut(s) 893
MseI TTAA 5 cut(s) 99, 294, 645, 839, 1483
MslI CAYNNNNRTG 2 cut(s) 878, 1410
Msp20I TGGCCA 1 cut(s) 893
MspI CCGG 2 cut(s) 205, 344
MspR9I CCNGG 1 cut(s) 206
MunI CAATTG 1 cut(s) 717
Mva1269I GAATGC 1 cut(s) 1280
MvnI CGCG 2 cut(s) 140, 198
MwoI GCNNNNNNNGC 1 cut(s) 215
NciI CCSGG 1 cut(s) 206
NlaIII CATG 5 cut(s) 468, 761, 774, 1265, 1300
NlaIV GGNNCC 3 cut(s) 471, 537, 631
NmeAIII GCCGAG 4 cut(s) 244, 590, 1044, 1367
NsiI ATGCAT 1 cut(s) 1294
NspI RCATGY 1 cut(s) 1300
PagI TCATGA 1 cut(s) 1261
PceI AGGCCT 1 cut(s) 741
PciSI GCTCTTC 1 cut(s) 1398
PctI GAATGC 1 cut(s) 1280
PdmI GAANNNNTTC 1 cut(s) 1190
PfeI GAWTC 1 cut(s) 1155
PflMI CCANNNNNTGG 1 cut(s) 900
PkrI GCNGC 4 cut(s) 139, 253, 1051, 1220
PleI GAGTC 4 cut(s) 362, 928, 956, 961
PpsI GAGTC 4 cut(s) 362, 928, 956, 961
Ppu21I YACGTR 1 cut(s) 572
PsiI TTATAA 1 cut(s) 1110
PspN4I GGNNCC 3 cut(s) 471, 537, 631
PspPI GGNCC 3 cut(s) 562, 629, 1331
PstI CTGCAG 1 cut(s) 256
PstNI CAGNNNCTG 1 cut(s) 1145
PsuI RGATCY 4 cut(s) 469, 535, 997, 1126
RsaI GTAC 1 cut(s) 1030
RsaNI GTAC 1 cut(s) 1029
RseI CAYNNNNRTG 2 cut(s) 878, 1410
SapI GCTCTTC 1 cut(s) 1398
SaqAI TTAA 5 cut(s) 99, 294, 645, 839, 1483
SatI GCNGC 4 cut(s) 138, 252, 1050, 1219
Sau96I GGNCC 3 cut(s) 562, 629, 1331
SchI GAGTC 4 cut(s) 362, 928, 956, 962
ScrFI CCNGG 1 cut(s) 206
SduI GDGCHC 1 cut(s) 571
SfaNI GCATC 4 cut(s) 124, 870, 1330, 1402
SfcI CTRYAG 2 cut(s) 252, 735
SmiMI CAYNNNNRTG 2 cut(s) 878, 1410
SpeI ACTAGT 1 cut(s) 1042
Sse9I AATT 4 cut(s) 460, 717, 776, 991
SseBI AGGCCT 1 cut(s) 741
SsiI CCGC 6 cut(s) 108, 138, 196, 482, 922, 1219
SspI AATATT 1 cut(s) 118
SspMI CTAG 7 cut(s) 386, 1010, 1043, 1082, 1130, 1335, 1376
StuI AGGCCT 1 cut(s) 741
StyD4I CCNGG 1 cut(s) 204
StyI CCWWGG 1 cut(s) 1087
TaaI ACNGT 5 cut(s) 190, 292, 439, 551, 1307
TaiI ACGT 1 cut(s) 574
TaqI TCGA 3 cut(s) 447, 956, 1402
TasI AATT 4 cut(s) 460, 717, 776, 991
TatI WGTACW 1 cut(s) 1028
TauI GCSGC 2 cut(s) 140, 1221
TfiI GAWTC 1 cut(s) 1155
Tru1I TTAA 5 cut(s) 99, 294, 645, 839, 1483
Tru9I TTAA 5 cut(s) 99, 294, 645, 839, 1483
TscAI CASTG 4 cut(s) 295, 556, 610, 1427
TseI GCWGC 2 cut(s) 251, 1049
TspGWI ACGGA 1 cut(s) 639
TspRI CASTG 4 cut(s) 295, 556, 610, 1427
Van91I CCANNNNNTGG 1 cut(s) 900
XapI RAATTY 3 cut(s) 460, 776, 991
XceI RCATGY 1 cut(s) 1300
XcmI CCANNNNNNNNNTGG 1 cut(s) 317
XmnI GAANNNNTTC 1 cut(s) 1190
XspI CTAG 7 cut(s) 386, 1010, 1043, 1082, 1130, 1335, 1376
Zsp2I ATGCAT 1 cut(s) 1294
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.